Edem1 (ER degradation enhancer, mannosidase alpha-like 1) - Rat Genome Database

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Gene: Edem1 (ER degradation enhancer, mannosidase alpha-like 1) Mus musculus
Analyze
Symbol: Edem1
Name: ER degradation enhancer, mannosidase alpha-like 1
RGD ID: 1557813
MGI Page MGI
Description: Exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Involved in positive regulation of retrograde protein transport, ER to cytosol; trimming of terminal mannose on C branch; and ubiquitin-dependent ERAD pathway. Localizes to integral component of endoplasmic reticulum membrane. Is expressed in embryo and liver. Orthologous to human EDEM1 (ER degradation enhancing alpha-mannosidase like protein 1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 1H-pyrazole.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A130059K23Rik; EDEM; ER degradation enhancing alpha mannosidase-like; ER degradation ER degradation enhancer, mannosidase alpha-like 1; ER degradation-enhancing alpha-mannosidase-like 1; ER degradation-enhancing alpha-mannosidase-like protein 1; KIAA0212; mKIAA0212
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm19008  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396108,800,984 - 108,836,317 (+)NCBIGRCm39mm39
GRCm39 Ensembl6108,805,602 - 108,836,317 (+)Ensembl
GRCm386108,824,045 - 108,859,356 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6108,828,641 - 108,859,356 (+)EnsemblGRCm38mm10GRCm38
MGSCv376108,778,635 - 108,809,350 (+)NCBIGRCm37mm9NCBIm37
MGSCv366108,794,429 - 108,825,128 (+)NCBImm8
Celera6110,630,730 - 110,662,933 (+)NCBICelera
Cytogenetic Map6E2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-phenylbutyric acid  (EXP)
acetamide  (ISO)
aflatoxin B1  (EXP)
aldehydo-D-glucosamine  (EXP)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (EXP)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
atrazine  (ISO)
beauvericin  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-D-glucosamine  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
boric acid  (ISO)
buspirone  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (EXP)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diclofenac  (EXP)
doxorubicin  (ISO)
flutamide  (ISO)
folic acid  (EXP)
folpet  (EXP)
gentamycin  (ISO)
glafenine  (ISO)
glucose  (EXP)
indometacin  (ISO)
isoprenaline  (EXP)
ivermectin  (ISO)
leflunomide  (ISO)
levofloxacin  (ISO)
methapyrilene  (ISO)
nevirapine  (ISO)
nickel atom  (ISO)
nilotinib  (ISO)
paracetamol  (EXP)
paraquat  (ISO)
phenformin  (ISO)
pirinixic acid  (EXP)
propiconazole  (EXP)
rimonabant  (EXP)
salubrinal  (ISO)
Soman  (ISO)
streptozocin  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
Tributyltin oxide  (EXP,ISO)
trimellitic anhydride  (EXP)
tunicamycin  (EXP,ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11375934   PMID:12477932   PMID:12610305   PMID:12610306   PMID:15215312   PMID:15308654  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16452630   PMID:16469704   PMID:16602821   PMID:18452703   PMID:18776938   PMID:19805353   PMID:20065073   PMID:20197277   PMID:21329881  
PMID:21795745   PMID:22154935   PMID:22643896   PMID:22745161   PMID:22905195   PMID:22925884   PMID:23233672   PMID:24200403   PMID:25046112   PMID:26494538   PMID:26816051   PMID:27626668  
PMID:27729526   PMID:29939162   PMID:32325033  


Genomics

Comparative Map Data
Edem1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396108,800,984 - 108,836,317 (+)NCBIGRCm39mm39
GRCm39 Ensembl6108,805,602 - 108,836,317 (+)Ensembl
GRCm386108,824,045 - 108,859,356 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6108,828,641 - 108,859,356 (+)EnsemblGRCm38mm10GRCm38
MGSCv376108,778,635 - 108,809,350 (+)NCBIGRCm37mm9NCBIm37
MGSCv366108,794,429 - 108,825,128 (+)NCBImm8
Celera6110,630,730 - 110,662,933 (+)NCBICelera
Cytogenetic Map6E2NCBI
EDEM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl35,187,646 - 5,219,958 (+)EnsemblGRCh38hg38GRCh38
GRCh3835,187,707 - 5,219,963 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3735,229,392 - 5,261,643 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3635,204,433 - 5,236,642 (+)NCBINCBI36hg18NCBI36
Build 3435,204,432 - 5,236,642NCBI
Celera35,167,241 - 5,199,525 (+)NCBI
Cytogenetic Map3p26.1NCBI
HuRef35,161,963 - 5,194,537 (+)NCBIHuRef
CHM1_135,179,737 - 5,212,027 (+)NCBICHM1_1
Edem1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24141,797,631 - 141,829,717 (+)NCBI
Rnor_6.0 Ensembl4140,886,545 - 140,915,779 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04140,886,644 - 140,918,654 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04217,499,472 - 217,532,312 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44144,349,966 - 144,379,501 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4130,450,129 - 130,482,057 (+)NCBICelera
Cytogenetic Map4q41NCBI
Edem1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554218,196,557 - 8,225,561 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554218,196,631 - 8,225,561 (-)NCBIChiLan1.0ChiLan1.0
EDEM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.135,234,108 - 5,266,057 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl35,234,123 - 5,262,003 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v035,133,927 - 5,162,485 (+)NCBIMhudiblu_PPA_v0panPan3
EDEM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12012,444,013 - 12,473,188 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2012,452,730 - 12,472,069 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2012,418,401 - 12,446,815 (-)NCBI
ROS_Cfam_1.02012,487,485 - 12,515,859 (-)NCBI
UMICH_Zoey_3.12012,193,009 - 12,221,286 (-)NCBI
UNSW_CanFamBas_1.02012,534,428 - 12,562,719 (-)NCBI
UU_Cfam_GSD_1.02012,520,467 - 12,548,815 (-)NCBI
Edem1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494211,531,211 - 11,558,394 (+)NCBI
SpeTri2.0NW_0049365774,486,617 - 4,516,379 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EDEM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1361,703,649 - 61,732,122 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11361,703,601 - 61,732,231 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21368,054,514 - 68,138,465 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EDEM1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12241,253,861 - 41,286,185 (+)NCBI
ChlSab1.1 Ensembl2241,253,989 - 41,282,140 (+)Ensembl
Edem1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477315,846,347 - 15,878,312 (+)NCBI

Position Markers
RH129325  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,859,134 - 108,859,310UniSTSGRCm38
MGSCv376108,809,128 - 108,809,304UniSTSGRCm37
Celera6110,662,711 - 110,662,887UniSTS
Cytogenetic Map6E2UniSTS
RH124979  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,845,982 - 108,846,212UniSTSGRCm38
MGSCv376108,795,976 - 108,796,206UniSTSGRCm37
Celera6110,649,574 - 110,649,804UniSTS
Cytogenetic Map6E2UniSTS
UniSTS:235515  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,859,027 - 108,859,273UniSTSGRCm38
MGSCv376108,809,021 - 108,809,267UniSTSGRCm37
Celera6110,662,604 - 110,662,850UniSTS
Cytogenetic Map6E2UniSTS
UniSTS:235516  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,857,388 - 108,857,636UniSTSGRCm38
MGSCv376108,807,382 - 108,807,630UniSTSGRCm37
Celera6110,660,972 - 110,661,211UniSTS
Cytogenetic Map6E2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
12910776Hcga4b_mhome cage activity 4b (mouse)6104503360110960065Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
1357793Pnhdlc1_mplasma non-HDL cholesterol 1 (mouse)Not determined6105564822114368849Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined106005405120917141Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2583
Count of miRNA genes:778
Interacting mature miRNAs:1054
Transcripts:ENSMUST00000089162
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_138677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001785109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB042828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB619976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000089162   ⟹   ENSMUSP00000086565
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,828,674 - 108,859,348 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203302
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,852,391 - 108,855,525 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203469
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,836,410 - 108,843,058 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204524
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,848,632 - 108,851,642 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204804   ⟹   ENSMUSP00000144901
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,828,641 - 108,859,356 (+)Ensembl
RefSeq Acc Id: NM_138677   ⟹   NP_619618
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,805,602 - 108,836,317 (+)NCBI
GRCm386108,828,641 - 108,859,356 (+)NCBI
MGSCv376108,778,635 - 108,809,350 (+)RGD
Celera6110,630,730 - 110,662,933 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006505746   ⟹   XP_006505809
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,813,376 - 108,836,317 (+)NCBI
GRCm386108,836,371 - 108,859,356 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001785109
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,800,984 - 108,836,317 (+)NCBI
GRCm386108,824,045 - 108,859,356 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_619618   ⟸   NM_138677
- UniProtKB: Q925U4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006505809   ⟸   XM_006505746
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000144901   ⟸   ENSMUST00000204804
RefSeq Acc Id: ENSMUSP00000086565   ⟸   ENSMUST00000089162

Promoters
RGD ID:6839214
Promoter ID:MM_KWN:47110
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_138677,   UC009DDR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366108,778,231 - 108,778,782 (+)MPROMDB
RGD ID:6890590
Promoter ID:EPDNEW_M8746
Type:initiation region
Name:Edem1_1
Description:Mus musculus ER degradation enhancer, mannosidase alpha-like1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386108,828,667 - 108,828,727EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2180139 AgrOrtholog
Ensembl Genes ENSMUSG00000030104 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000086565 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000144901 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000089162 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000204804 UniProtKB/TrEMBL
Gene3D-CATH 1.50.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 6hp_glycosidase-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_hydro_47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Seven-hairpin_glycosidases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:192193 UniProtKB/Swiss-Prot
MGD MGI:2180139 ENTREZGENE
NCBI Gene 192193 ENTREZGENE
Pfam Glyco_hydro_47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Edem1 PhenoGen
PRINTS GLYHDRLASE47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48225 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SV08_MOUSE UniProtKB/TrEMBL
  EDEM1_MOUSE UniProtKB/Swiss-Prot
  Q3U9S2_MOUSE UniProtKB/TrEMBL
  Q3UX12_MOUSE UniProtKB/TrEMBL
  Q6ZQG3_MOUSE UniProtKB/TrEMBL
  Q8BYV2_MOUSE UniProtKB/TrEMBL
  Q8C0J7_MOUSE UniProtKB/TrEMBL
  Q925U4 ENTREZGENE
UniProt Secondary Q8CFM1 UniProtKB/Swiss-Prot