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Gene: Styx (serine/threonine/tyrosine interaction protein) Mus musculus

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Symbol:

Styx

Name:

serine/threonine/tyrosine interaction protein

RGD ID:

1312346

MGI Page

MGI

Description:

Predicted to enable F-box domain binding activity and pseudophosphatase activity. Acts upstream of or within spermatogenesis. Located in cytoplasm. Orthologous to human STYX (serine/threonine/tyrosine interacting protein).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

0610039A20Rik; hStyxb; inactive tyrosine-protein phosphatase Styx; MGC106795; phosphoserine/threonine/tyrosine interaction protein; protein tyrosine phosphatase-like protein; protein tyrosine phosphatase-like unspliced c-terminal product and spliced c-terminal end STYX; serine/threonine/tyrosine-interacting protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Related Pseudogenes:

Gm18944 Styx-ps

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	45,588,534 - 45,614,608 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	45,588,550 - 45,660,277 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	45,351,186 - 45,376,884 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	45,351,093 - 45,422,820 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	45,970,861 - 45,996,559 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	44,273,063 - 44,298,761 (+)	NCBI		MGSCv36	mm8
Celera	14	41,531,156 - 41,556,813 (+)	NCBI		Celera
Cytogenetic Map	14	C1	NCBI
cM Map	14	22.9	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Styx	Mouse	1,2-dichloroethane	decreases expression	EXP		6480464	ethylene dichloride results in decreased expression of STYX mRNA	CTD	PMID:28960355
Styx	Mouse	1,2-dimethylhydrazine	decreases expression	EXP		6480464	1 and 2-Dimethylhydrazine results in decreased expression of STYX mRNA	CTD	PMID:22206623
Styx	Mouse	1,2-dimethylhydrazine	multiple interactions	EXP		6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of STYX mRNA	CTD	PMID:22206623
Styx	Mouse	17alpha-ethynylestradiol	increases expression	EXP		6480464	Ethinyl Estradiol results in increased expression of STYX mRNA	CTD	PMID:17942748
Styx	Mouse	17alpha-ethynylestradiol	multiple interactions	EXP		6480464	[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of STYX mRNA	CTD	PMID:17942748
Styx	Mouse	2,3,7,8-tetrachlorodibenzodioxine	multiple interactions	EXP		6480464	[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of STYX mRNA	CTD	PMID:17942748
Styx	Mouse	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of STYX mRNA	CTD	PMID:21570461
Styx	Mouse	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	STYX (Homo sapiens)	6480464	Tetrachlorodibenzodioxin results in decreased expression of STYX mRNA	CTD	PMID:20106945 and PMID:21632981
Styx	Mouse	2-hydroxypropanoic acid	decreases expression	ISO	STYX (Homo sapiens)	6480464	Lactic Acid results in decreased expression of STYX mRNA	CTD	PMID:30851411
Styx	Mouse	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of STYX mRNA	CTD	PMID:28628672
Styx	Mouse	4,4'-diaminodiphenylmethane	increases expression	EXP		6480464	4 and 4'-diaminodiphenylmethane results in increased expression of STYX mRNA	CTD	PMID:18648102
Styx	Mouse	4-hydroxyphenyl retinamide	decreases expression	EXP		6480464	Fenretinide results in decreased expression of STYX mRNA	CTD	PMID:28973697
Styx	Mouse	acetazolamide	increases expression	EXP		6480464	Acetazolamide results in increased expression of STYX mRNA	CTD	PMID:19274763
Styx	Mouse	all-trans-retinoic acid	decreases expression	ISO	STYX (Homo sapiens)	6480464	Tretinoin results in decreased expression of STYX mRNA	CTD	PMID:21934132
Styx	Mouse	aristolochic acid A	decreases expression	ISO	STYX (Homo sapiens)	6480464	aristolochic acid I results in decreased expression of STYX mRNA	CTD	PMID:33212167
Styx	Mouse	arsenous acid	increases expression	ISO	STYX (Homo sapiens)	6480464	Arsenic Trioxide results in increased expression of STYX mRNA	CTD	PMID:20458559
Styx	Mouse	benzo[a]pyrene	multiple interactions	EXP		6480464	AHR protein affects the reaction [Benzo(a)pyrene affects the expression of STYX mRNA]	CTD	PMID:22228805
Styx	Mouse	benzo[a]pyrene	decreases expression	ISO	STYX (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased expression of STYX mRNA	CTD	PMID:21632981
Styx	Mouse	benzo[a]pyrene	increases expression	EXP		6480464	Benzo(a)pyrene results in increased expression of STYX mRNA	CTD	PMID:22228805
Styx	Mouse	bisphenol F	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of STYX mRNA	CTD	PMID:28628672
Styx	Mouse	cantharidin	increases expression	EXP		6480464	Cantharidin results in increased expression of STYX mRNA	CTD	PMID:36907384
Styx	Mouse	cisplatin	increases expression	ISO	STYX (Homo sapiens)	6480464	Cisplatin results in increased expression of STYX protein	CTD	PMID:16803524
Styx	Mouse	copper(II) sulfate	decreases expression	ISO	STYX (Homo sapiens)	6480464	Copper Sulfate results in decreased expression of STYX mRNA	CTD	PMID:19549813
Styx	Mouse	crocidolite asbestos	decreases expression	EXP		6480464	Asbestos and Crocidolite results in decreased expression of STYX mRNA	CTD	PMID:29279043
Styx	Mouse	cyclosporin A	decreases expression	ISO	STYX (Homo sapiens)	6480464	Cyclosporine results in decreased expression of STYX mRNA	CTD	PMID:20106945 more ...
Styx	Mouse	dexamethasone	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of STYX mRNA	CTD	PMID:28628672
Styx	Mouse	diarsenic trioxide	increases expression	ISO	STYX (Homo sapiens)	6480464	Arsenic Trioxide results in increased expression of STYX mRNA	CTD	PMID:20458559
Styx	Mouse	dorsomorphin	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Styx	Mouse	epoxiconazole	increases expression	EXP		6480464	epoxiconazole results in increased expression of STYX mRNA	CTD	PMID:35436446
Styx	Mouse	folic acid	multiple interactions	EXP		6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of STYX mRNA	CTD	PMID:22206623
Styx	Mouse	folic acid	decreases expression	EXP		6480464	Folic Acid results in decreased expression of STYX mRNA	CTD	PMID:25629700
Styx	Mouse	folic acid	decreases expression	ISO	STYX (Homo sapiens)	6480464	Folic Acid results in decreased expression of STYX mRNA	CTD	PMID:21867686
Styx	Mouse	hydralazine	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[Hydralazine co-treated with Valproic Acid] results in increased expression of STYX mRNA	CTD	PMID:17183730
Styx	Mouse	indometacin	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of STYX mRNA	CTD	PMID:28628672
Styx	Mouse	methotrexate	affects expression	EXP		6480464	Methotrexate affects the expression of STYX mRNA	CTD	PMID:18502557
Styx	Mouse	methyl methanesulfonate	increases expression	ISO	STYX (Homo sapiens)	6480464	Methyl Methanesulfonate results in increased expression of STYX mRNA	CTD	PMID:23649840
Styx	Mouse	methylmercury chloride	increases expression	ISO	STYX (Homo sapiens)	6480464	methylmercuric chloride results in increased expression of STYX mRNA	CTD	PMID:26272509
Styx	Mouse	methylmercury chloride	decreases expression	ISO	STYX (Homo sapiens)	6480464	methylmercuric chloride results in decreased expression of STYX mRNA	CTD	PMID:28001369
Styx	Mouse	paracetamol	affects expression	EXP		6480464	Acetaminophen affects the expression of STYX mRNA	CTD	PMID:17562736
Styx	Mouse	perfluorooctane-1-sulfonic acid	decreases expression	ISO	STYX (Homo sapiens)	6480464	perfluorooctane sulfonic acid results in decreased expression of STYX mRNA	CTD	PMID:27153767
Styx	Mouse	phenobarbital	affects expression	EXP		6480464	Phenobarbital affects the expression of STYX mRNA	CTD	PMID:23091169
Styx	Mouse	phenylmercury acetate	decreases expression	ISO	STYX (Homo sapiens)	6480464	Phenylmercuric Acetate results in decreased expression of STYX mRNA	CTD	PMID:26272509
Styx	Mouse	phenylmercury acetate	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of STYX mRNA	CTD	PMID:27188386
Styx	Mouse	propiconazole	decreases expression	EXP		6480464	propiconazole results in decreased expression of STYX mRNA	CTD	PMID:21278054
Styx	Mouse	quercetin	decreases expression	ISO	STYX (Homo sapiens)	6480464	Quercetin results in decreased expression of STYX mRNA	CTD	PMID:21632981
Styx	Mouse	rac-lactic acid	decreases expression	ISO	STYX (Homo sapiens)	6480464	Lactic Acid results in decreased expression of STYX mRNA	CTD	PMID:30851411
Styx	Mouse	SB 431542	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Styx	Mouse	sodium arsenate	increases expression	EXP		6480464	sodium arsenate results in increased expression of STYX mRNA	CTD	PMID:21795629
Styx	Mouse	thimerosal	decreases expression	ISO	STYX (Homo sapiens)	6480464	Thimerosal results in decreased expression of STYX mRNA	CTD	PMID:27188386
Styx	Mouse	titanium dioxide	decreases methylation	EXP		6480464	titanium dioxide results in decreased methylation of STYX gene	CTD	PMID:35295148
Styx	Mouse	trichostatin A	decreases expression	ISO	STYX (Homo sapiens)	6480464	trichostatin A results in decreased expression of STYX mRNA	CTD	PMID:24935251 and PMID:26272509
Styx	Mouse	trichostatin A	affects expression	ISO	STYX (Homo sapiens)	6480464	trichostatin A affects the expression of STYX mRNA	CTD	PMID:28542535
Styx	Mouse	trichostatin A	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of STYX mRNA	CTD	PMID:27188386
Styx	Mouse	triphenyl phosphate	affects expression	ISO	STYX (Homo sapiens)	6480464	triphenyl phosphate affects the expression of STYX mRNA	CTD	PMID:37042841
Styx	Mouse	valproic acid	multiple interactions	ISO	STYX (Homo sapiens)	6480464	[Hydralazine co-treated with Valproic Acid] results in increased expression of STYX mRNA	CTD	PMID:17183730
Styx	Mouse	vorinostat	decreases expression	ISO	STYX (Homo sapiens)	6480464	vorinostat results in decreased expression of STYX mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Styx	Mouse	negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process	involved_in	IBA	PANTHER:PTN000016920 and UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000033
Styx	Mouse	negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process	involved_in	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119
Styx	Mouse	regulation of ERK1 and ERK2 cascade	involved_in	ISS	UniProtKB:Q8WUJ0	2290270		UniProt	GO_REF:0000024
Styx	Mouse	regulation of ERK1 and ERK2 cascade	involved_in	IBA	PANTHER:PTN000016920 and UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000033
Styx	Mouse	regulation of ERK1 and ERK2 cascade	involved_in	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119
Styx	Mouse	spermatogenesis	acts_upstream_of_or_within	IMP	MGI:2179177	2290270	PMID:11842224	MGI	PMID:11842224

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Styx	Mouse	cytoplasm	is_active_in	IBA	PANTHER:PTN000016920 more ...	2290270		GO_Central	GO_REF:0000033
Styx	Mouse	cytoplasm	located_in	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119
Styx	Mouse	cytoplasm	located_in	IDA		2290270	PMID:11842224	MGI	PMID:11842224
Styx	Mouse	cytosol	located_in	IEA	UniProtKB-SubCell:SL-0091	2290270		UniProt	GO_REF:0000044
Styx	Mouse	nucleoplasm	is_active_in	IBA	PANTHER:PTN000016920 and UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000033
Styx	Mouse	nucleoplasm	located_in	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119
Styx	Mouse	nucleus	located_in	ISS	UniProtKB:Q8WUJ0	2290270		UniProt	GO_REF:0000024
Styx	Mouse	nucleus	located_in	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Styx	Mouse	F-box domain binding	enables	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119
Styx	Mouse	protein binding	enables	IPI	PR:Q9CR86	2290270	PMID:11842224	MGI	PMID:11842224
Styx	Mouse	pseudophosphatase activity	enables	ISO	UniProtKB:Q8WUJ0	2290270		GO_Central	GO_REF:0000119

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Styx	Mouse	abnormal germ cell morphology		IAGP		5509061		MGI	PMID:11842224
Styx	Mouse	abnormal spermatogenesis		IAGP		5509061		MGI	PMID:11842224
Styx	Mouse	asthenozoospermia		IAGP		5509061		MGI	PMID:11842224
Styx	Mouse	decreased spermatid number		IAGP		5509061		MGI	PMID:11842224
Styx	Mouse	globozoospermia		IAGP		5509061		MGI	PMID:11842224
Styx	Mouse	male infertility		IAGP		5509061		MGI	PMID:11842224
Styx	Mouse	teratozoospermia		IAGP		5509061		MGI	PMID:11842224

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	MGD IEA	MGD IEA
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:7592916	PMID:8000140	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11842224	PMID:12477932	PMID:14610273	PMID:15489334	PMID:16141072	PMID:16141073
PMID:18799693	PMID:21873635	PMID:35338113

Styx
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	45,588,534 - 45,614,608 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	45,588,550 - 45,660,277 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	45,351,186 - 45,376,884 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	45,351,093 - 45,422,820 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	45,970,861 - 45,996,559 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	44,273,063 - 44,298,761 (+)	NCBI		MGSCv36	mm8
Celera	14	41,531,156 - 41,556,813 (+)	NCBI		Celera
Cytogenetic Map	14	C1	NCBI
cM Map	14	22.9	NCBI

STYX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	52,730,166 - 52,774,989 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	52,730,166 - 52,774,989 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	53,196,884 - 53,241,707 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	52,266,682 - 52,309,232 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	52,266,681 - 52,309,230	NCBI
Celera	14	33,246,562 - 33,291,384 (+)	NCBI		Celera
Cytogenetic Map	14	q22.1	NCBI
HuRef	14	33,357,870 - 33,402,695 (+)	NCBI		HuRef
CHM1_1	14	53,135,768 - 53,180,604 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	46,937,959 - 46,982,783 (+)	NCBI		T2T-CHM13v2.0

Styx
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	21,043,738 - 21,075,515 (+)	NCBI		GRCr8
mRatBN7.2	15	18,565,214 - 18,595,797 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	18,564,633 - 18,593,524 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	21,360,166 - 21,387,716 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	22,317,123 - 22,344,673 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	20,573,697 - 20,601,247 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	19,690,079 - 19,720,683 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	19,690,194 - 19,717,774 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	23,654,221 - 23,684,839 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	21,241,269 - 21,257,477 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	15	18,993,717 - 19,021,297 (+)	NCBI		Celera
Cytogenetic Map	15	p14	NCBI

Styx
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	10,428,556 - 10,445,880 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	10,428,556 - 10,445,384 (-)	NCBI	ChiLan1.0	ChiLan1.0

STYX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	53,861,108 - 53,905,919 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	53,077,618 - 53,122,386 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	33,326,587 - 33,371,399 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	51,610,195 - 51,654,978 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	51,610,523 - 51,651,096 (+)	Ensembl	panpan1.1		panPan2

STYX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	28,949,732 - 28,990,455 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	28,950,061 - 28,986,812 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	28,694,245 - 28,734,942 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	29,115,959 - 29,157,083 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	29,116,029 - 29,157,068 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	28,790,130 - 28,830,989 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	28,862,414 - 28,903,709 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	29,191,141 - 29,232,324 (+)	NCBI		UU_Cfam_GSD_1.0

Styx
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	76,312,721 - 76,346,356 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936697	2,088,043 - 2,120,586 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936697	2,087,689 - 2,120,507 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STYX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	182,357,607 - 182,407,782 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	182,357,597 - 182,407,792 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	202,628,192 - 202,678,332 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STYX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	29,809,827 - 29,860,475 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	29,809,806 - 29,856,608 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	18,084,438 - 18,132,386 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Styx
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	16,352,503 - 16,384,624 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	16,342,926 - 16,384,673 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Styx
898 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	70
Count of miRNA genes:	70
Interacting mature miRNAs:	70
Transcripts:	ENSMUST00000111835
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357589	Kdnw2_m	kidney weight 2 (mouse)			Not determined		14	20887473	121269804	Mouse
1300625	Cosz2_m	cocaine seizure 2 (mouse)			Not determined		14	35045797	68785736	Mouse
1301777	Bglq15_m	body growth late QTL 15 (mouse)			Not determined		14	42962416	76962593	Mouse
1357527	Epfpq1_m	epididymal fat percentage QTL 1 (mouse)			Not determined		14	21062450	71885801	Mouse
27226775	Tibl7_m	tibia length 7, 5 week (mouse)					14	30321957	48837457	Mouse
27226774	Tibl15_m	tibia length 15, 10 week (mouse)					14	30321957	87937436	Mouse
1300544	Hypn_m	hyperinsulinemia (mouse)			Not determined		14	15160616	49160765	Mouse
1300998	Cia17_m	collagen induced arthritis 17 (mouse)			Not determined		14	30335250	64335381	Mouse
1300805	Mors3_m	modifier of obesity related sterility 3 (mouse)			Not determined		14	43037270	77037418	Mouse
4141864	Mrdq4_m	modifier of retinal degeneration QTL 4 (mouse)			Not determined			9923245	48765082	Mouse
27226752	Femd4_m	femur midshaft diameter 4, 5 week (mouse)					14	13769273	47237457	Mouse
27226748	Femd8_m	femur midshaft diameter 8, 10 week (mouse)					14	13769273	46737457	Mouse
1301424	Skull21_m	skull morphology 21 (mouse)			Not determined		14	42962416	76962593	Mouse
27226744	Metcl6_m	metatarsal-calcaneal length 6, 5 week (mouse)					14	30321957	52937457	Mouse
4141400	Nilac8_m	nicotine induced locomotor activity 8 (mouse)			Not determined		14	43065847	77066045	Mouse
4142485	Modor2_m	modifier of ocular retardation 2 (mouse)			Not determined		14	24926248	58179769	Mouse
4142419	Tgq26_m	triglyceride QTL 26 (mouse)			Not determined			40337319	74337319	Mouse
27226737	Metcl12_m	metatarsal-calcaneal length 12, 10 week (mouse)					14	33221957	59437449	Mouse
1301372	Sluc13_m	susceptibility to lung cancer 13 (mouse)			Not determined		14	18827604	52827726	Mouse
1301091	Bbaa21_m	B.burgdorferi-associated arthritis 21 (mouse)			Not determined		14	43065847	77066045	Mouse
10043887	Cia50_m	collagen induced arthritis QTL 50 (mouse)			Not determined		14	37430185	71430320	Mouse
10043886	Cia49_m	collagen induced arthritis QTL 49 (mouse)			Not determined		14	29996994	63997133	Mouse
1300779	Dyscalc4_m	dystrophic cardiac calcinosis 4 (mouse)			Not determined		14	12212871	46213007	Mouse
27226727	Tibl21_m	tibia length 21, 16 week (mouse)					14	34121957	52937457	Mouse
14746973	Manh76_m	mandible shape 76 (mouse)					14	22287217	56287217	Mouse
1300909	Ath13_m	atherosclerosis 13 (mouse)			Not determined		14	30335250	64335381	Mouse
13506929	Recrq10_m	recombination rate in male meiosis QTL 10 (mouse)					14	27921957	61137449	Mouse

AI451058

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	14	45,349,377 - 45,349,517	UniSTS	GRCm38
MGSCv37	14	45,969,052 - 45,969,192	UniSTS	GRCm37
Celera	14	41,529,427 - 41,529,567	UniSTS
Cytogenetic Map	14	C1	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_019637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036158766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC154575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK002822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK014193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK030122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK031186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK042741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK046970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC038608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC096674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT025535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U34973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000111835 ⟹ ENSMUSP00000107466

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,684 - 45,611,233 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,227 - 45,373,776 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000226303 ⟹ ENSMUSP00000154228

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,679 - 45,611,758 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,222 - 45,374,301 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000226603 ⟹ ENSMUSP00000154323

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,696 - 45,609,037 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,239 - 45,371,580 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000226785 ⟹ ENSMUSP00000154662

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,634 - 45,614,340 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,177 - 45,376,883 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000226873 ⟹ ENSMUSP00000153854

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,550 - 45,622,964 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,093 - 45,385,507 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000227538

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,605,822 - 45,611,079 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,368,365 - 45,373,622 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000228311 ⟹ ENSMUSP00000154148

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,699 - 45,660,277 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,242 - 45,422,820 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000228321

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,608,964 - 45,611,263 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,371,507 - 45,373,806 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000228818 ⟹ ENSMUSP00000154485

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	45,588,679 - 45,604,067 (+)	Ensembl
GRCm38.p6 Ensembl	14	45,351,222 - 45,366,610 (+)	Ensembl

RefSeq Acc Id:

NM_019637 ⟹ NP_062611

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	45,588,643 - 45,614,341 (+)	NCBI
GRCm38	14	45,351,186 - 45,376,884 (+)	NCBI
MGSCv37	14	45,970,861 - 45,996,559 (+)	RGD
Celera	14	41,531,156 - 41,556,813 (+)	RGD
cM Map	14		ENTREZGENE

Sequence:

show sequence

GGAGACGGTTATGGGCTCGTGCCTGGGTCGGATCCCGGCTCTCTGAGGGGCGCGGAGACCTGCGGGAGGGACACGGCCGCAGCATGGCGGCCGGCAGCGCACCGCCCTGCCCTCCGCCTTCCTGTCGC
AGCCGCTTGGATCCTGTGGTCCGCGAGTGCTTGCTGTGAGCCTGCCGCGCGTCAGCCCCCCCACCGCTCGCCCGCCCGCCCGCCCTCCTTCCCTTGTCGCCTCTGCCAGCCCGGAGGGCGGCCGGGCG
CACCGCGCCCACCCACCGGGGCCCTGGGACCATGGAGGACGTGAAACTGGAGTTCCCCTCGCTCCCGCAGTGCAAAGACGACGCCGAGGAGTGGACTTACCCTATGAGACGAGAGATGCAGGAAGTTT
TGCCTGGATTGTTCTTAGGCCCATACTCTTCTGCTATGAAAAGCAAGCTACCTATACTTCAGAAACATGGCATAACTCATATAATTTGCATACGGCAAAATATTGAAGCAAACTTTATTAAACCAAAC
TTTCAACAATTATTTAGATATTTAGTTTTGGATATTGCTGATAATCCAGTTGAAAACATAATACGTTTTTTCCCTATGACTAAAGAGTTTATTGATGGAAGCTTACAAAATGGAGGAAAAGTTCTTGT
CCATGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGATGCATTTGCTTATGTCCAAGAAAGGAGATTTTGTATTAATCCTAATG
CTGGATTTGTCCACCAACTTCAGGAATATGAAGCCATCTACTTAGCAAAATTAACAATACAGATGATGTCACCACTCCAAATAGAAAGGTCCTTAGCTGTTCATTCTGGTACCACAGGTAGTGTGAAG
AGAACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATGGGTGTGAGCTTCCATCTGGAAAGGAGAGGATCCTAGTGATGATAA
TGTGAAATGGTAAACTCACAAATACTTTCTTTTCAATTATACATTGCTTCCAGACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCACTGATGGGTGATGGGTTTACTTAA
AAAAAAGAGAAAAAAAGAAACAAAAAAACCTTTATGGTTTTATTATAAACCAAGAATTTTGGACTTGCAAAGAGGTATTATTGCAATAATGCACTTTTCATACTTGAAATTTATTTGTATGATATAAA
GTTATTACTTTAAACAAAATACAAGTTAGGGGGATTTGTTTATAGATTTTGGATAATTTATAACAAAAAAATTTCCTAATGTTTCCTAAAAACTCATTTTGTGTTATATATATTACATTTAAGGTAAT
TTTACAGTTCAATTTTATGATGAAGCCTCTTACAAAAACATTAACAAAATGTAGAACTTGTCCACATTTTTTAGTATAATTCAGTAACTTGATTACCATTTTTTTAAACTTCTTGGTCCCGTATCTTT
AAATCATGACTTTAGCCAACTAGCCTACTTTACAATTTAATACAGTTAATACTTCCTTTCTAATTGCCTCCCTTATTCTAAATGAGAAAAGTTGAAATGATTAAAGAAAGAGGTCTTACTTTCTAAAA
CCAGATACTCCAAAAAATAAGGATAGTGTTATATTTTCCACATGACTTTTTTCTCTTTGCTGTTTAAGCCAAATGTAGACTTGGTCTTTTCAGAGTTGCTGAGCTCTTCTAACTTTTGTCCAAAATGG
TTCAAAGTAGACCAAACCAATGTAGCACTGTTTCTTCAATATGAAACCCCCAAAAGAAAAGTGCCTTGCATCAACAAACAAGCAAATCCTCATGACTTCTAAATTAGTATATAAAGCAGTGAACAGCT
ATTAACGTTTTTCTGTAATTTCTTGTTTTAAAATCATAAATTAAATCTGATGCTTGAAGAAAGTAAATTATTTGGAATGAGACACTTCCTTCTATTTTCTGTTAATTATTTCTCTGAGGTTCAGCTGA
CAGCTTTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGGCTTCAGTGTATTGTAGATTACTGTTTTAACTTGTTCCTAAATTAATTCAAATTTGTACCATAATTTGCATTAGCAAAAT
CATTTTATGGCTCTTTAGTTTTCCATGTTTTTATCTATATGTATAAAAGTTGTTCTACAAAAAACATTTTACTACTGTAAATGTGATGTGCAGAAGAGAGAAGTGTTTTTAACTTTTGTACATGATGA
CTTTAGGGTAGCACAAACACAGCTCCTTTATATATATATAGCTCACGTGTCTCAGCCCTCTTTCGAGGTGCTTTACGGTTGGGAATGATGCCCGCACACTCCCAGGGTACCATGAGGCACTGTGTAAG
GTAACAGGTTGCACTTAAGTTCCTTGCTTTGCTCACCACCCTATGACATCAACAGTATAGAAAGGTTCTTTGTCCTTCACAGTAGGAGCCTGAATATAAACCAGAATTACTGTTACCTTGATTTCTAG
CCTCTTCTGGTTTCCCATCCCATCTCCTATCTTTCAGCTCTGAAAAAAAGCATTGCTTTTAATTCTGTTGTGTCACAGGCATGGTGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCT
GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCACTGAACAGAAATTGTGATTAAAGCAATCTCTATTTTAAAAAAATTGGATTTTCAAGATGAGACATGTGAAG
TAACTTTTTAAAATAAGTTTTATAAAAATACATGTTCCTCTTTAAATAGGAGTCTGTCCAAAAACAGAGGTTATTGACATTCATTTGTAGCTGGTAATTTTCCATTTTTCTATCCACTGTCATTTTTT
TCTTCTCACATAAAGTGCCTATCCAGCACGATATACTGGAGACAGTCTCAGACACTAGGGACTGCCACCATGTTGAGCACAGTTGATGTGGACAGATGAAGTTTGTCCTTTCATAAGAAGCCTCCAAG
TTTCTTTTCTTCCTCTGTATTTACTGTCAGTAGCTGTCTTAGGTTCCATTTCTAGTGATGTTTTGTAAGTTAACTATGATAAATTTATCCAATCATGATTTATTCTCTAGACAACTTGAATAATGTAT
GAATGTCCACCCAGTTTCAGTATTAAATATGAAAGCTGGGTTCATAATTAAAACTATACATTTTCTTATCAAAACTTAGGGAACTTCATTACTCCCCATTTGAAAGTTTGAGACAGCTCCTGGAAACT
GGAGTGGAGAAGGGAGTCTTCTCCTAGTTTAACTGATTCATGCTAGTTTCTTGTCTATTAGATGTTATACCAACTCTATAGTAGGAATGTTCAAGTGTGATAACTTTGCTACCAACTTTCAACCGCTT
GTAGAACAGAATATTCATTTGAAGGGGTGTAGGGCTGTACTTAATCTACTTAATCTGAGTCTAGAAGTAATGTCAGAAAATGCTAAGCATGTCCTTTGTAATAAAACATAAGGTTCTTAATTGTTTAA
CTGCTATGGAATTCACATGAATTAGAAGTATTTAAGTGCAATCTTGAATTATGAAGTTGGATGTATATATTAGGATGTCAACTTGATGTAAAGTAAATGAGCAGTTACCTGATGGATCTTTTTAAATA
ACCGGTTTAATTCACAATCCTAAAGCATAACTTCACGTCAGTATTTACAGTATCTTTGTCCATTCAACAACACTCCAATGAGCAAATAGTAGGAAATAGCTGAGAATTACTCAAGGATTTTGTTTATT
TATTTTTATTAGGAAAATAAGTTTCTAGAGTCTTGAGTGCTGGATAATTCTTTTGTCTTTCCCATCCATGGCAGCTAAAAAAAAAATCACTCAAAATATTCAGGTTTACATGTTCTGCTCTCTTACAG
GGAGCTACCATACCTCACAGTTCAAAGTGTTTTCTCAATCAGTAACATGATACTGACATGTAATTGCAATTTACTATGCAGCAAAAATGACTCAAGAACAGTAACATATGTGTCTCTTTACCTCTGTA
TAGGCAATTGCTTACGTTATTCTACTTTTAACATTTGTACTCAGATAAAATGCTTATGTATGTATAGGAATGTCACAGTGCAAGATGCTGCTAGCCTGGGCACAAAGTATTAAAATTATTTTGTGAAG
ACTGGTGGTTGTATTAAAACTCTTGTGCCATTGT

hide sequence

RefSeq Acc Id:

XM_036158766 ⟹ XP_036014659

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	45,588,534 - 45,614,608 (+)	NCBI

Sequence:

show sequence

TGCGCGCTCGCGGACGGGCGGGGCGGAGGCGCGCTGACACCTGGCGGCGGGGGCGGGCCGTCGG
CGAGCGTGGGCTGGGATTGGCTGGGCCGCGTGGGCTGGGGCGGGAGGAGACGGTTATGGGCTCGTGCCTGGGTCGGATCCCGGCTCTCTGAGGGGCGCGGAGACCTGCGGGAGGGACACGGCCGCAGC
ATGGCGGCCGGCAGCGCACCGCCCTGCCCTCCGCCTTCCTGTCGCAGCCGCTTGGATCCTGTGGTCCGCGAGTGCTTGCTGTGAGCCTGCCGCGCGTCAGCCCCCCCACCGCTCGCCCGCCCGCCCGC
CCTCCTTCCCTTGTCGCCTCTGCCAGCCCGGAGGGCGGCCGGGCGCACCGCGCCCACCCACCGGGGCCCTGGGACCATGGAGGACGTGAAACTGGAGTTCCCCTCGCTCCCGCAGTGCAAAGACGACG
CCGAGGAGTGGACTTACCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGGATTGTTCTTAGGCCCATACTCTTCTGCTATGAAAAGCAAGCTACCTATACTTCAGAAACATGGCATAACTCATATA
ATTTGCATACGGCAAAATATTGAAGCAAACTTTATTAAACCAAACTTTCAACAATTATTTAGATATTTAGTTTTGGATATTGCTGATAATCCAGTTGAAAACATAATACGTTTTTTCCCTATGACTAA
AGAGTTTATTGATGGAAGCTTACAAAATGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGATG
CATTTGCTTATGTCCAAGAAAGGAGATTTTGTATTAATCCTAATGCTGGATTTGTCCACCAACTTCAGGTAGTGTGAAGAGAACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCG
CACAGAACGGCTGACCTGTGAGGACTGTTACATGGGTGTGAGCTTCCATCTGGAAAGGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTTTTCAATTATACATTGCTT
CCAGACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCACTGATGGGTGATGGGTTTACTTAAAAAAAAGAGAAAAAAAGAAACAAAAAAACCTTTATGGTTTTATTATAAA
CCAAGAATTTTGGACTTGCAAAGAGGTATTATTGCAATAATGCACTTTTCATACTTGAAATTTATTTGTATGATATAAAGTTATTACTTTAAACAAAATACAAGTTAGGGGGATTTGTTTATAGATTT
TGGATAATTTATAACAAAAAAATTTCCTAATGTTTCCTAAAAACTCATTTTGTGTTATATATATTACATTTAAGGTAATTTTACAGTTCAATTTTATGATGAAGCCTCTTACAAAAACATTAACAAAA
TGTAGAACTTGTCCACATTTTTTAGTATAATTCAGTAACTTGATTACCATTTTTTTAAACTTCTTGGTCCCGTATCTTTAAATCATGACTTTAGCCAACTAGCCTACTTTACAATTTAATACAGTTAA
TACTTCCTTTCTAATTGCCTCCCTTATTCTAAATGAGAAAAGTTGAAATGATTAAAGAAAGAGGTCTTACTTTCTAAAACCAGATACTCCAAAAAATAAGGATAGTGTTATATTTTCCACATGACTTT
TTTCTCTTTGCTGTTTAAGCCAAATGTAGACTTGGTCTTTTCAGAGTTGCTGAGCTCTTCTAACTTTTGTCCAAAATGGTTCAAAGTAGACCAAACCAATGTAGCACTGTTTCTTCAATATGAAACCC
CCAAAAGAAAAGTGCCTTGCATCAACAAACAAGCAAATCCTCATGACTTCTAAATTAGTATATAAAGCAGTGAACAGCTATTAACGTTTTTCTGTAATTTCTTGTTTTAAAATCATAAATTAAATCTG
ATGCTTGAAGAAAGTAAATTATTTGGAATGAGACACTTCCTTCTATTTTCTGTTAATTATTTCTCTGAGGTTCAGCTGACAGCTTTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGG
CTTCAGTGTATTGTAGATTACTGTTTTAACTTGTTCCTAAATTAATTCAAATTTGTACCATAATTTGCATTAGCAAAATCATTTTATGGCTCTTTAGTTTTCCATGTTTTTATCTATATGTATAAAAG
TTGTTCTACAAAAAACATTTTACTACTGTAAATGTGATGTGCAGAAGAGAGAAGTGTTTTTAACTTTTGTACATGATGACTTTAGGGTAGCACAAACACAGCTCCTTTATATATATATAGCTCACGTG
TCTCAGCCCTCTTTCGAGGTGCTTTACGGTTGGGAATGATGCCCGCACACTCCCAGGGTACCATGAGGCACTGTGTAAGGTAACAGGTTGCACTTAAGTTCCTTGCTTTGCTCACCACCCTATGACAT
CAACAGTATAGAAAGGTTCTTTGTCCTTCACAGTAGGAGCCTGAATATAAACCAGAATTACTGTTACCTTGATTTCTAGCCTCTTCTGGTTTCCCATCCCATCTCCTATCTTTCAGCTCTGAAAAAAA
GCATTGCTTTTAATTCTGTTGTGTCACAGGCATGGTGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCTGTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCC
ATGGCTCACTGAACAGAAATTGTGATTAAAGCAATCTCTATTTTAAAAAAATTGGATTTTCAAGATGAGACATGTGAAGTAACTTTTTAAAATAAGTTTTATAAAAATACATGTTCCTCTTTAAATAG
GAGTCTGTCCAAAAACAGAGGTTATTGACATTCATTTGTAGCTGGTAATTTTCCATTTTTCTATCCACTGTCATTTTTTTCTTCTCACATAAAGTGCCTATCCAGCACGATATACTGGAGACAGTCTC
AGACACTAGGGACTGCCACCATGTTGAGCACAGTTGATGTGGACAGATGAAGTTTGTCCTTTCATAAGAAGCCTCCAAGTTTCTTTTCTTCCTCTGTATTTACTGTCAGTAGCTGTCTTAGGTTCCAT
TTCTAGTGATGTTTTGTAAGTTAACTATGATAAATTTATCCAATCATGATTTATTCTCTAGACAACTTGAATAATGTATGAATGTCCACCCAGTTTCAGTATTAAATATGAAAGCTGGGTTCATAATT
AAAACTATACATTTTCTTATCAAAACTTAGGGAACTTCATTACTCCCCATTTGAAAGTTTGAGACAGCTCCTGGAAACTGGAGTGGAGAAGGGAGTCTTCTCCTAGTTTAACTGATTCATGCTAGTTT
CTTGTCTATTAGATGTTATACCAACTCTATAGTAGGAATGTTCAAGTGTGATAACTTTGCTACCAACTTTCAACCGCTTGTAGAACAGAATATTCATTTGAAGGGGTGTAGGGCTGTACTTAATCTAC
TTAATCTGAGTCTAGAAGTAATGTCAGAAAATGCTAAGCATGTCCTTTGTAATAAAACATAAGGTTCTTAATTGTTTAACTGCTATGGAATTCACATGAATTAGAAGTATTTAAGTGCAATCTTGAAT
TATGAAGTTGGATGTATATATTAGGATGTCAACTTGATGTAAAGTAAATGAGCAGTTACCTGATGGATCTTTTTAAATAACCGGTTTAATTCACAATCCTAAAGCATAACTTCACGTCAGTATTTACA
GTATCTTTGTCCATTCAACAACACTCCAATGAGCAAATAGTAGGAAATAGCTGAGAATTACTCAAGGATTTTGTTTATTTATTTTTATTAGGAAAATAAGTTTCTAGAGTCTTGAGTGCTGGATAATT
CTTTTGTCTTTCCCATCCATGGCAGCTAAAAAAAAAATCACTCAAAATATTCAGGTTTACATGTTCTGCTCTCTTACAGGGAGCTACCATACCTCACAGTTCAAAGTGTTTTCTCAATCAGTAACATG
ATACTGACATGTAATTGCAATTTACTATGCAGCAAAAATGACTCAAGAACAGTAACATATGTGTCTCTTTACCTCTGTATAGGCAATTGCTTACGTTATTCTACTTTTAACATTTGTACTCAGATAAA
ATGCTTATGTATGTATAGGAATGTCACAGTGCAAGATGCTGCTAGCCTGGGCACAAAGTATTAAAATTATTTTGTGAAGACTGGTGGTTGTATTAAAACTCTTGTGCCATTGTACTTGCAATGATTGA
GAAGCTCATTCATATTCCTTATGCCTCAAGACCTCTTTGTCTTCTGGGTAGAAGTAACCCAGCTTTACTCCCACAGATTAAGGTGAGTAAAAATTTAATAATATTAAAACGGTTTCAGTTGGTGACAT
GCTACAACTGTTTCTGTAAGACGATTTAAGAGAAAACACAACTCCATGGGTTTTATTGAAATACTAACATCACAGACTGTCTTACCAAAGAGTTTAATGTTAAAAAATAAAGTGCTAAATTTTA

hide sequence


Protein RefSeqs	NP_062611	(Get FASTA)	NCBI Sequence Viewer
	XP_036014659	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA87036	(Get FASTA)	NCBI Sequence Viewer
	AAA87037	(Get FASTA)	NCBI Sequence Viewer
	AAH38608	(Get FASTA)	NCBI Sequence Viewer
	AAH85089	(Get FASTA)	NCBI Sequence Viewer
	AAH96674	(Get FASTA)	NCBI Sequence Viewer
	BAB22384	(Get FASTA)	NCBI Sequence Viewer
	BAC26793	(Get FASTA)	NCBI Sequence Viewer
	BAC32931	(Get FASTA)	NCBI Sequence Viewer
	BAE32400	(Get FASTA)	NCBI Sequence Viewer
	BAE38539	(Get FASTA)	NCBI Sequence Viewer
	BAE43317	(Get FASTA)	NCBI Sequence Viewer
	EDL20693	(Get FASTA)	NCBI Sequence Viewer
	EDL20694	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000094153.3
	ENSMUSP00000107466
	ENSMUSP00000153854
	ENSMUSP00000153854.2
	ENSMUSP00000154148.2
GenBank Protein	Q60969	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_062611 ⟸ NM_019637
- UniProtKB:	Q60970 (UniProtKB/Swiss-Prot), Q3TMA3 (UniProtKB/Swiss-Prot), Q9DCF8 (UniProtKB/Swiss-Prot), Q60969 (UniProtKB/Swiss-Prot), Q3U4N1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEDVKLEFPSLPQCKDDAEEWTYPMRREMQEVLPGLFLGPYSSAMKSKLPILQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQNGGKVLVHGNAGISRSA AFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIYLAKLTIQMMSPLQIERSLAVHSGTTGSVKRTHEEDDDFGNMQVATAQNG hide sequence

Ensembl Acc Id:

ENSMUSP00000107466 ⟸ ENSMUST00000111835

Ensembl Acc Id:

ENSMUSP00000154148 ⟸ ENSMUST00000228311

Ensembl Acc Id:

ENSMUSP00000154228 ⟸ ENSMUST00000226303

Ensembl Acc Id:

ENSMUSP00000154323 ⟸ ENSMUST00000226603

Protein Domains

Tyrosine specific protein phosphatases Tyrosine-protein phosphatase

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q60969-F1-model_v2	AlphaFold	Q60969	1-223	view protein structure

RGD ID:

8682034

Promoter ID:

EPDNEW_M19048

Type:

initiation region

Name:

Styx_1

Description:

Mus musculus serine/threonine/tyrosine interaction protein ,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	14	45,351,204 - 45,351,264	EPDNEW

RGD ID:

6824983

Promoter ID:

MM_KWN:16419

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6

Transcripts:

ENSMUST00000095952, ENSMUST00000111835, XM_001473727_2_GM14698

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	14	45,970,156 - 45,970,977 (+)	MPROMDB

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000053205	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSG00000071748	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000096420.3	UniProtKB/Swiss-Prot
	ENSMUST00000111835	ENTREZGENE
	ENSMUST00000226873	ENTREZGENE
	ENSMUST00000226873.2	UniProtKB/Swiss-Prot
	ENSMUST00000228311.2	UniProtKB/Swiss-Prot
Gene3D-CATH	3.90.190.10	UniProtKB/Swiss-Prot
InterPro	Dual-sp_phosphatase_cat-dom	UniProtKB/Swiss-Prot
	Prot-tyrosine_phosphatase-like	UniProtKB/Swiss-Prot
	STYX-Interacting_Phosphatase	UniProtKB/Swiss-Prot
	TYR_PHOSPHATASE_dom	UniProtKB/Swiss-Prot
	TYR_PHOSPHATASE_DUAL_dom	UniProtKB/Swiss-Prot
KEGG Report	mmu:56291	UniProtKB/Swiss-Prot
MGD	MGI:1891150	ENTREZGENE
NCBI Gene	56291	ENTREZGENE
PANTHER	SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN	UniProtKB/Swiss-Prot
	SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN	UniProtKB/Swiss-Prot
Pfam	DSPc	UniProtKB/Swiss-Prot
PhenoGen	Styx	PhenoGen
PROSITE	TYR_PHOSPHATASE_2	UniProtKB/Swiss-Prot
	TYR_PHOSPHATASE_DUAL	UniProtKB/Swiss-Prot
SMART	DSPc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52799	UniProtKB/Swiss-Prot
UniProt	A0A2I3BQL4_MOUSE	UniProtKB/TrEMBL
	A0A2I3BRI3_MOUSE	UniProtKB/TrEMBL
	A0A2I3BRP4_MOUSE	UniProtKB/TrEMBL
	A0A2K6EDL3	ENTREZGENE, UniProtKB/TrEMBL
	Q3TMA3	ENTREZGENE
	Q3U4N1	ENTREZGENE, UniProtKB/TrEMBL
	Q4V9V2_MOUSE	UniProtKB/TrEMBL
	Q5U4H6_MOUSE	UniProtKB/TrEMBL
	Q60969	ENTREZGENE
	Q60970	ENTREZGENE
	Q9DCF8	ENTREZGENE
	STYX_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	Q3TMA3	UniProtKB/Swiss-Prot
	Q60970	UniProtKB/Swiss-Prot
	Q9DCF8	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Mammalian Phenotype