Ids (iduronate 2-sulfatase) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Ids (iduronate 2-sulfatase) Mus musculus
Analyze
Symbol: Ids
Name: iduronate 2-sulfatase
RGD ID: 1557423
MGI Page MGI
Description: Enables iduronate-2-sulfatase activity. Involved in dermatan sulfate catabolic process and heparan sulfate proteoglycan catabolic process. Located in lysosome. Is active in lysosomal lumen. Is expressed in nervous system and neural retina. Used to study mucopolysaccharidosis II. Human ortholog(s) of this gene implicated in mucopolysaccharidosis II. Orthologous to human IDS (iduronate 2-sulfatase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha-L-iduronate sulfate sulfatase; AW214631; iduronate sulfatase; iduronate-2-sulfatase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X69,386,675 - 69,429,437 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX69,386,675 - 69,408,690 (-)EnsemblGRCm39 Ensembl
GRCm38X70,343,069 - 70,385,834 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX70,343,069 - 70,365,084 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X67,596,244 - 67,618,260 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X66,603,734 - 66,625,640 (-)NCBIMGSCv36mm8
CeleraX61,343,214 - 61,364,574 (-)NCBICelera
Cytogenetic MapXA7.2NCBI
cM MapX36.01NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2-methylcholine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carmustine  (ISO)
CGP 52608  (ISO)
chloroacetaldehyde  (ISO)
chromium(6+)  (ISO)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
ethanol  (EXP,ISO)
folic acid  (ISO)
formaldehyde  (ISO)
ibuprofen  (ISO)
ifosfamide  (ISO)
isoflurane  (EXP)
lead(0)  (ISO)
lithium chloride  (ISO)
maneb  (EXP)
mercury dibromide  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
miconazole  (EXP)
nickel sulfate  (ISO)
ozone  (EXP)
paraquat  (EXP)
parathion  (EXP)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
potassium chromate  (ISO)
resveratrol  (ISO)
sarin  (ISO)
SB 431542  (ISO)
sevoflurane  (EXP)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
testosterone enanthate  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
Yessotoxin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
lysosomal lumen  (IDA)
lysosome  (IDA,IMP,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal appendicular skeleton morphology  (IAGP)
abnormal basilar membrane morphology  (IAGP)
abnormal body weight  (IAGP)
abnormal bone structure  (IAGP)
abnormal brain morphology  (IAGP)
abnormal brainstem morphology  (IAGP)
abnormal calcaneum morphology  (IAGP)
abnormal clavicle morphology  (IAGP)
abnormal coat/ hair morphology  (IAGP)
abnormal cochlear ganglion morphology  (IAGP)
abnormal cranium morphology  (IAGP)
abnormal digit morphology  (IAGP)
abnormal facial morphology  (IAGP)
abnormal foam cell morphology  (IAGP)
abnormal gait  (IAGP)
abnormal glycosaminoglycan level  (IAGP)
abnormal hand joint morphology  (IAGP)
abnormal hindlimb joint morphology  (IAGP)
abnormal joint morphology  (IAGP)
abnormal long bone diaphysis morphology  (IAGP)
abnormal lymph node morphology  (IAGP)
abnormal lysosome physiology  (IAGP)
abnormal mandible morphology  (IAGP)
abnormal neurocranium morphology  (IAGP)
abnormal neuron morphology  (IAGP)
abnormal Reissner membrane morphology  (IAGP)
abnormal skeleton morphology  (IAGP)
abnormal snout morphology  (IAGP)
abnormal spatial working memory  (IAGP)
abnormal spinal cord morphology  (IAGP)
abnormal spiral ligament morphology  (IAGP)
abnormal tendon morphology  (IAGP)
abnormal tympanic membrane morphology  (IAGP)
abnormal vertebrae morphology  (IAGP)
abnormal zygomatic bone morphology  (IAGP)
alopecia  (IAGP)
brain vacuoles  (IAGP)
broad snout  (IAGP)
calcified calcaneal tendon  (IAGP)
coarse facial features  (IAGP)
coarse hair  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased cranium height  (IAGP)
decreased joint mobility  (IAGP)
decreased locomotor activity  (IAGP)
distended urinary bladder  (IAGP)
enlarged neurocranium  (IAGP)
enlarged seminal vesicle  (IAGP)
exostosis  (IAGP)
increased anxiety-related response  (IAGP)
increased bone mineral content  (IAGP)
increased bone mineral density  (IAGP)
increased bone ossification  (IAGP)
increased brain weight  (IAGP)
increased diameter of long bones  (IAGP)
increased epididymis weight  (IAGP)
increased kidney weight  (IAGP)
increased liver weight  (IAGP)
increased lung weight  (IAGP)
increased or absent threshold for auditory brainstem response  (IAGP)
increased spleen weight  (IAGP)
increased testis weight  (IAGP)
increased thyroid gland weight  (IAGP)
increased urine glycosaminoglycan level  (IAGP)
joint swelling  (IAGP)
large face  (IAGP)
lysosomal protein accumulation  (IAGP)
macrophthalmia  (IAGP)
middle ear effusion  (IAGP)
osteosclerosis  (IAGP)
premature death  (IAGP)
round snout  (IAGP)
short stride length  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Genetic and physical mapping of the biglycan gene on the mouse X chromosome. Chatterjee A, etal., Mamm Genome 1993;4(1):33-6.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Intermediate form of mucopolysaccharidosis type II (Hunter disease): a C1327 to T substitution in the iduronate sulfatase gene. Sukegawa K, etal., Biochem Biophys Res Commun. 1992 Mar 16;183(2):809-13.
9. Identification and characterization of 20 novel pathogenic variants in 60 unrelated Indian patients with mucopolysaccharidoses type I and type II. Uttarilli A, etal., Clin Genet. 2016 Dec;90(6):496-508. doi: 10.1111/cge.12795. Epub 2016 May 26.
Additional References at PubMed
PMID:1572654   PMID:1937018   PMID:8325651   PMID:8352760   PMID:8439729   PMID:8678976   PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12572850  
PMID:15149955   PMID:15293786   PMID:15962010   PMID:16141072   PMID:16141073   PMID:16174644   PMID:16505002   PMID:17876721   PMID:19679226   PMID:20503373   PMID:20643830   PMID:20652491  
PMID:20876612   PMID:21873635   PMID:22096577   PMID:22279584   PMID:22704483   PMID:22847837   PMID:23568409   PMID:27228099   PMID:27590924   PMID:28207863   PMID:28334757   PMID:29606503  
PMID:29648648   PMID:30064964   PMID:32751752   PMID:34108486   PMID:34681597   PMID:35226042   PMID:35816218   PMID:37188686   PMID:37196079   PMID:37860991  


Genomics

Comparative Map Data
Ids
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X69,386,675 - 69,429,437 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX69,386,675 - 69,408,690 (-)EnsemblGRCm39 Ensembl
GRCm38X70,343,069 - 70,385,834 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX70,343,069 - 70,365,084 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X67,596,244 - 67,618,260 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X66,603,734 - 66,625,640 (-)NCBIMGSCv36mm8
CeleraX61,343,214 - 61,364,574 (-)NCBICelera
Cytogenetic MapXA7.2NCBI
cM MapX36.01NCBI
IDS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X149,476,988 - 149,505,306 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX149,476,988 - 149,521,096 (-)EnsemblGRCh38hg38GRCh38
GRCh37X148,558,519 - 148,586,836 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X148,368,206 - 148,394,698 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X148,274,422 - 148,292,552NCBI
CeleraX148,909,049 - 148,935,639 (-)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX137,513,419 - 137,540,564 (-)NCBIHuRef
CHM1_1X148,521,322 - 148,547,912 (-)NCBICHM1_1
T2T-CHM13v2.0X147,742,730 - 147,771,047 (-)NCBIT2T-CHM13v2.0
Ids
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X154,070,781 - 154,093,681 (-)NCBIGRCr8
mRatBN7.2X149,025,976 - 149,046,641 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX149,025,976 - 149,046,663 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX151,220,193 - 151,240,858 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X154,754,522 - 154,775,046 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X152,295,942 - 152,316,605 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0869,447,971 - 69,466,708 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl869,449,801 - 69,466,618 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0869,156,152 - 69,176,554 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X156,641,266 - 156,661,031 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1132,362,983 - 132,383,553 (+)NCBICelera
Cytogenetic MapXq37NCBI
Ids
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554981,860,628 - 1,886,867 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554981,863,002 - 1,886,720 (-)NCBIChiLan1.0ChiLan1.0
IDS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X148,782,502 - 148,809,520 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X148,786,110 - 148,813,018 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X138,493,117 - 138,520,017 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X148,919,692 - 148,946,441 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX148,912,475 - 148,946,441 (-)Ensemblpanpan1.1panPan2
IDS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X117,490,749 - 117,515,566 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX117,491,548 - 117,515,496 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX103,387,036 - 103,407,466 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X119,549,981 - 119,574,777 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX119,549,985 - 119,574,802 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X116,666,069 - 116,686,486 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X118,877,384 - 118,897,818 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X118,605,631 - 118,626,060 (-)NCBIUU_Cfam_GSD_1.0
Ids
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X115,525,779 - 115,551,763 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651362,993 - 88,774 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651362,966 - 88,844 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IDS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX121,572,807 - 121,596,513 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X121,572,797 - 121,596,525 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X139,050,899 - 139,063,575 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103232717
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X124,187,554 - 124,214,764 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX124,191,390 - 124,214,157 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236675231,986 - 13,481 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ids
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248832,030,783 - 2,055,519 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248832,031,208 - 2,056,379 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ids
1061 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1765
Count of miRNA genes:756
Interacting mature miRNAs:972
Transcripts:ENSMUST00000101509, ENSMUST00000130519
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
12880401Emlq3_memotional learning QTL 3 (mouse)X5799218370090431Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse

Markers in Region
AW214631  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X70,343,416 - 70,343,506UniSTSGRCm38
MGSCv37X67,596,591 - 67,596,681UniSTSGRCm37
CeleraX61,343,561 - 61,343,651UniSTS
Cytogenetic MapXA7.1UniSTS
Whitehead/MRC_RHX729.73UniSTS
IDS  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X70,362,996 - 70,363,854UniSTSGRCm38
MGSCv37X67,616,171 - 67,617,029UniSTSGRCm37
CeleraX61,362,480 - 61,363,338UniSTS
Cytogenetic MapXA7.1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001401926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC002315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF538870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ627044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BN000750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX294168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX510361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD740869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L07921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02003185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X75636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000101509   ⟹   ENSMUSP00000099046
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX69,386,675 - 69,408,690 (-)Ensembl
GRCm38.p6 EnsemblX70,343,069 - 70,365,084 (-)Ensembl
Ensembl Acc Id: ENSMUST00000130519   ⟹   ENSMUSP00000118732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX69,394,676 - 69,404,697 (-)Ensembl
GRCm38.p6 EnsemblX70,351,070 - 70,361,091 (-)Ensembl
RefSeq Acc Id: NM_001401926   ⟹   NP_001388855
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,429,437 (-)NCBI
RefSeq Acc Id: NM_001401927   ⟹   NP_001388856
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,408,695 (-)NCBI
RefSeq Acc Id: NM_001401929   ⟹   NP_001388858
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,408,695 (-)NCBI
RefSeq Acc Id: NM_001401930   ⟹   NP_001388859
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,393,768 - 69,408,695 (-)NCBI
RefSeq Acc Id: NM_001401931   ⟹   NP_001388860
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,429,437 (-)NCBI
RefSeq Acc Id: NM_001401932   ⟹   NP_001388861
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,429,437 (-)NCBI
RefSeq Acc Id: NM_001401933   ⟹   NP_001388862
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,429,169 (-)NCBI
RefSeq Acc Id: NM_001401934   ⟹   NP_001388863
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,429,169 (-)NCBI
RefSeq Acc Id: NM_001401935   ⟹   NP_001388864
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,428,902 (-)NCBI
RefSeq Acc Id: NM_001401936   ⟹   NP_001388865
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,428,902 (-)NCBI
RefSeq Acc Id: NM_001401937   ⟹   NP_001388866
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,428,902 (-)NCBI
RefSeq Acc Id: NM_010498   ⟹   NP_034628
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,675 - 69,408,695 (-)NCBI
GRCm38X70,343,069 - 70,365,085 (-)NCBI
MGSCv37X67,596,244 - 67,618,260 (-)RGD
CeleraX61,343,214 - 61,364,574 (-)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006527846   ⟹   XP_006527909
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,753 - 69,408,720 (-)NCBI
GRCm38X70,343,147 - 70,365,116 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318393   ⟹   XP_017173882
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,753 - 69,429,426 (-)NCBI
GRCm38X70,343,147 - 70,385,820 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318394   ⟹   XP_017173883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,753 - 69,429,426 (-)NCBI
GRCm38X70,343,147 - 70,385,820 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251229   ⟹   XP_030107089
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,753 - 69,429,156 (-)NCBI
GRCm38X70,343,147 - 70,385,550 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251230   ⟹   XP_030107090
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X69,386,753 - 69,429,376 (-)NCBI
GRCm38X70,343,147 - 70,385,770 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001388855 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388856 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388858 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388859 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388860 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388861 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388862 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388863 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388864 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388865 (Get FASTA)   NCBI Sequence Viewer  
  NP_001388866 (Get FASTA)   NCBI Sequence Viewer  
  NP_034628 (Get FASTA)   NCBI Sequence Viewer  
  XP_006527909 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173882 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173883 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107089 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107090 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37880 (Get FASTA)   NCBI Sequence Viewer  
  AAN16453 (Get FASTA)   NCBI Sequence Viewer  
  BAE21082 (Get FASTA)   NCBI Sequence Viewer  
  BAE38612 (Get FASTA)   NCBI Sequence Viewer  
  CAF25312 (Get FASTA)   NCBI Sequence Viewer  
  CAI84996 (Get FASTA)   NCBI Sequence Viewer  
  EDL26597 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000099046
  ENSMUSP00000099046.3
  ENSMUSP00000118732.2
GenBank Protein Q08890 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034628   ⟸   NM_010498
- Peptide Label: isoform 1 precursor
- UniProtKB: Q32KI7 (UniProtKB/Swiss-Prot),   Q3TM30 (UniProtKB/Swiss-Prot),   Q08890 (UniProtKB/Swiss-Prot),   Q3V1R8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006527909   ⟸   XM_006527846
- Peptide Label: isoform X3
- UniProtKB: Q684Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173883   ⟸   XM_017318394
- Peptide Label: isoform X2
- UniProtKB: Q684Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173882   ⟸   XM_017318393
- Peptide Label: isoform X2
- UniProtKB: Q684Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030107090   ⟸   XM_030251230
- Peptide Label: isoform X2
- UniProtKB: Q684Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030107089   ⟸   XM_030251229
- Peptide Label: isoform X2
- UniProtKB: Q684Q4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000118732   ⟸   ENSMUST00000130519
Ensembl Acc Id: ENSMUSP00000099046   ⟸   ENSMUST00000101509
RefSeq Acc Id: NP_001388861   ⟸   NM_001401932
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388860   ⟸   NM_001401931
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388855   ⟸   NM_001401926
- Peptide Label: isoform 2 precursor
RefSeq Acc Id: NP_001388862   ⟸   NM_001401933
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388863   ⟸   NM_001401934
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388866   ⟸   NM_001401937
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388865   ⟸   NM_001401936
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388864   ⟸   NM_001401935
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001388858   ⟸   NM_001401929
- Peptide Label: isoform 3 precursor
RefSeq Acc Id: NP_001388856   ⟸   NM_001401927
- Peptide Label: isoform 2 precursor
RefSeq Acc Id: NP_001388859   ⟸   NM_001401930
- Peptide Label: isoform 4 precursor
Protein Domains
Sulfatase N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q08890-F1-model_v2 AlphaFold Q08890 1-552 view protein structure

Promoters
RGD ID:6845847
Promoter ID:MM_KWN:60605
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000038111,   ENSMUST00000101509,   ENSMUST00000114633,   NM_010498_IDS,   UC009TJE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X67,618,056 - 67,618,556 (-)MPROMDB
RGD ID:13680636
Promoter ID:EPDNEW_M24467
Type:initiation region
Name:Ids_1
Description:Mus musculus iduronate 2-sulfatase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X70,365,074 - 70,365,134EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96417 AgrOrtholog
Ensembl Genes ENSMUSG00000035847 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000101509 ENTREZGENE
  ENSMUST00000101509.9 UniProtKB/Swiss-Prot
  ENSMUST00000130519.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.720.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Alkaline_phosphatase_core_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IDS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfatase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfatase_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15931 UniProtKB/Swiss-Prot
MGD MGI:96417 ENTREZGENE
NCBI Gene 15931 ENTREZGENE
PANTHER IDURONATE 2-SULFATASE UniProtKB/Swiss-Prot
  IDURONATE 2-SULFATASE UniProtKB/Swiss-Prot
  IDURONATE 2-SULFATASE UniProtKB/TrEMBL
  IDURONATE 2-SULFATASE UniProtKB/TrEMBL
Pfam Sulfatase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ids PhenoGen
PROSITE SULFATASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SULFATASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53649 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F6X9C5_MOUSE UniProtKB/TrEMBL
  IDS_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q32KI7 ENTREZGENE
  Q3TM30 ENTREZGENE
  Q3V1R8 ENTREZGENE, UniProtKB/TrEMBL
  Q684Q4 ENTREZGENE, UniProtKB/TrEMBL
  Q8CJ15_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q32KI7 UniProtKB/Swiss-Prot
  Q3TM30 UniProtKB/Swiss-Prot