Pcid2 (PCI domain containing 2) - Rat Genome Database

Name: Pcid2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Pcid2 (PCI domain containing 2) Mus musculus

Analyze

Symbol:

Pcid2

Name:

PCI domain containing 2

RGD ID:

1316002

MGI Page

MGI

Description:

Predicted to enable RNA binding activity and double-stranded DNA binding activity. Involved in several processes, including positive regulation of mitotic cell cycle spindle assembly checkpoint; regulation of DNA-templated transcription; and spleen development. Predicted to be located in cytoplasm and nucleus. Predicted to be part of nuclear pore nuclear basket and transcription export complex 2. Is expressed in lung; nervous system; retina layer; and skeletal muscle. Orthologous to human PCID2 (PCI domain containing 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

A730042J05Rik; CSN12-like protein; PCI domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PCID2 (PCI domain containing 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Pcid2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pcid2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PCID2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PCID2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pcid2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PCID2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PCID2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pcid2 (PCI domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Pcid2 (PCI domain containing 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PCID2 (PCI domain containing 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pcid2 (PCI domain containing 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	C27F2.10	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	PCID2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	THP1	Alliance	DIOPT (Ensembl Compara\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YJR084W	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	pcid2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	13,125,476 - 13,155,343 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	13,127,189 - 13,155,459 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	13,075,476 - 13,105,343 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	13,077,189 - 13,105,459 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	13,077,525 - 13,105,343 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	13,077,167 - 13,105,382 (-)	NCBI		MGSCv36	mm8
Celera	8	13,244,463 - 13,272,258 (-)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	5.73	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

blood coagulation disease (ISO)

factor X deficiency (ISO)

hemorrhagic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

butan-1-ol (ISO)

cannabidiol (ISO)

CGP 52608 (ISO)

copper atom (EXP)

copper(0) (EXP)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

ethanol (EXP)

folic acid (EXP)

formaldehyde (ISO)

hexane (ISO)

ivermectin (ISO)

methyl methanesulfonate (ISO)

ozone (ISO)

paracetamol (ISO)

potassium chromate (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

titanium dioxide (EXP)

trimellitic anhydride (EXP)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

heterochromatin organization (IMP)

mRNA transport (IEA)

negative regulation of apoptotic process (IMP,ISO)

negative regulation of cysteine-type endopeptidase activity (ISO)

negative regulation of lymphoid progenitor cell differentiation (IMP)

negative regulation of transcription initiation by RNA polymerase II (IMP)

poly(A)+ mRNA export from nucleus (IBA)

positive regulation of B cell differentiation (IMP)

positive regulation of DNA-templated transcription (IMP,ISO)

positive regulation of mitotic cell cycle spindle assembly checkpoint (IMP,ISO)

post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery (IBA)

protein transport (IEA)

regulation of mRNA stability (ISO,ISS)

spleen development (IMP)

transcription elongation by RNA polymerase II (IBA)

Cellular Component

cytoplasm (ISO,ISS)

nuclear pore nuclear basket (ISO,ISS)

nucleus (ISO,ISS)

transcription export complex 2 (IBA,ISO,ISS)

Molecular Function

double-stranded DNA binding (IBA,IEA)

protein binding (IPI)

RNA binding (IBA,IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal definitive hematopoiesis (IAGP)

abnormal enterocyte morphology (IAGP)

abnormal leukocyte morphology (IAGP)

abnormal small intestine crypts of Lieberkuhn morphology (IAGP)

abnormal spleen B cell follicle morphology (IAGP)

abnormal spleen capsule morphology (IAGP)

abnormal spleen morphology (IAGP)

decreased bone marrow cell number (IAGP)

decreased follicular B cell number (IAGP)

decreased hematocrit (IAGP)

decreased hematopoietic stem cell number (IAGP)

decreased lymphocyte cell number (IAGP)

decreased marginal zone B cell number (IAGP)

decreased mature B cell number (IAGP)

decreased monocyte cell number (IAGP)

decreased neutrophil cell number (IAGP)

decreased spleen red pulp amount (IAGP)

decreased spleen weight (IAGP)

decreased spleen white pulp amount (IAGP)

embryonic lethality before implantation, complete penetrance (IAGP)

impaired hematopoiesis (IAGP)

increased enterocyte apoptosis (IAGP)

premature death (IAGP)

small intestinal villus atrophy (IAGP)

small thymus (IAGP)

spleen hypoplasia (IAGP)

thrombocytopenia (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
2.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12077329	PMID:12393421	PMID:12477932	PMID:15226823	PMID:15782199	PMID:16141072
PMID:16141073	PMID:16467204	PMID:17616641	PMID:18287559	PMID:18339895	PMID:19481525	PMID:20870947	PMID:21677750	PMID:21873635	PMID:24167073	PMID:28378742	PMID:29138493
PMID:30196744	PMID:32325033	PMID:34255829	PMID:36114006

Genomics

Comparative Map Data

Pcid2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	13,125,476 - 13,155,343 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	13,127,189 - 13,155,459 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	13,075,476 - 13,105,343 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	13,077,189 - 13,105,459 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	13,077,525 - 13,105,343 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	13,077,167 - 13,105,382 (-)	NCBI		MGSCv36	mm8
Celera	8	13,244,463 - 13,272,258 (-)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	5.73	NCBI

PCID2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	113,165,002 - 113,208,669 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	113,177,536 - 113,208,715 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	113,831,850 - 113,862,983 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	112,879,927 - 112,910,984 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	13	94,658,168 - 94,689,275 (-)	NCBI		Celera
Cytogenetic Map	13	q34	NCBI
HuRef	13	94,270,740 - 94,301,913 (-)	NCBI		HuRef
CHM1_1	13	113,800,717 - 113,831,888 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	112,427,103 - 112,461,015 (-)	NCBI		T2T-CHM13v2.0

Pcid2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	83,125,386 - 83,150,851 (+)	NCBI		GRCr8
mRatBN7.2	16	76,423,245 - 76,448,712 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	76,423,245 - 76,448,712 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	81,703,795 - 81,729,260 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	85,156,372 - 85,181,837 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	80,405,044 - 80,431,334 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	81,757,582 - 81,783,047 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	81,756,971 - 81,783,047 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	81,242,949 - 81,268,414 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	81,280,427 - 81,305,892 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	81,279,932 - 81,305,288 (+)	NCBI
Celera	16	74,229,279 - 74,254,744 (+)	NCBI		Celera
Cytogenetic Map	16	q12.5	NCBI

Pcid2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955404	618,092 - 639,704 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955404	618,092 - 639,424 (+)	NCBI	ChiLan1.0	ChiLan1.0

PCID2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	114,681,970 - 114,713,034 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	113,369,041 - 113,400,323 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	94,319,699 - 94,350,763 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	113,388,251 - 113,419,523 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	113,388,251 - 113,419,251 (-)	Ensembl	panpan1.1		panPan2

PCID2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	60,602,440 - 60,623,811 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	60,602,888 - 60,623,719 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	60,314,829 - 60,336,177 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	61,228,565 - 61,250,676 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	61,228,122 - 61,309,216 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	60,726,462 - 60,747,819 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	60,728,651 - 60,750,011 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	60,760,103 - 60,781,453 (-)	NCBI		UU_Cfam_GSD_1.0

Pcid2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	195,488,082 - 195,511,764 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	446,712 - 465,039 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	440,440 - 464,116 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PCID2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	78,541,318 - 78,556,733 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	78,541,278 - 78,556,784 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	86,178,780 - 86,194,261 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PCID2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	91,163,158 - 91,212,450 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	91,177,463 - 91,211,735 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666046	48,212,929 - 48,249,687 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pcid2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624793	722,762 - 744,743 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624793	722,743 - 744,824 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Pcid2
959 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1852
Count of miRNA genes:	667
Interacting mature miRNAs:	817
Transcripts:	ENSMUST00000164416, ENSMUST00000165097, ENSMUST00000166881, ENSMUST00000167198, ENSMUST00000168164, ENSMUST00000172443
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357525	Pnhdlc3_m	plasma non-HDL cholesterol 3 (mouse)			Not determined		8	7212499	23753815	Mouse
11533914	Mts5_m	mammary tumor susceptibility 5 (mouse)					8	1	30447432	Mouse
13432571	Scvg1_m	subcutaneous vessel growth QTL 1 (mouse)					8	1	24751082	Mouse
14697703	Stsl1_m	Salmonella typhimurium susceptibility locus 1 (mouse)					8	11350000	17050016	Mouse
1300906	Ap8q_m	alcohol preference 8 QTL (mouse)			Not determined		8	7984189	41984342	Mouse
1301929	Eae24_m	susceptibility to experimental allergic encephalomyelitis 24 (mouse)			Not determined		8	8103201	42103372	Mouse
27226756	Femd2_m	femur midshaft diameter 2, 5 week (mouse)					8	4950000	35067154	Mouse
1301128	Sluc20_m	susceptibility to lung cancer 20 (mouse)			Not determined		8	8103201	42103372	Mouse
4140978	Nilac5_m	nicotine induced locomotor activity 5 (mouse)			Not determined		8	1	31773288	Mouse
1301532	Scc8_m	colon tumor susceptibility 8 (mouse)			Not determined		8	7212499	35110107	Mouse
10412209	Cypr7_m	cytokine production 7 (mouse)			Not determined		8	8103201	42103372	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_178708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006508761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC127308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC133520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK042945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK045796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK048722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK082891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK163697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC006047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC072621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC118533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY281425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000164416 ⟹ ENSMUSP00000133204

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	13,127,189 - 13,155,459 (-)	Ensembl
GRCm38.p6 Ensembl	8	13,077,189 - 13,105,459 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000165097

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	13,129,724 - 13,136,683 (-)	Ensembl
GRCm38.p6 Ensembl	8	13,079,724 - 13,086,683 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000166881

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	13,129,896 - 13,154,831 (-)	Ensembl
GRCm38.p6 Ensembl	8	13,079,896 - 13,104,831 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000167198 ⟹ ENSMUSP00000130059

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	13,135,325 - 13,148,607 (-)	Ensembl
GRCm38.p6 Ensembl	8	13,085,325 - 13,098,607 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000168164 ⟹ ENSMUSP00000128207

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	13,127,189 - 13,155,459 (-)	Ensembl
GRCm38.p6 Ensembl	8	13,077,189 - 13,105,459 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000172443 ⟹ ENSMUSP00000127622

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	13,135,374 - 13,154,821 (-)	Ensembl
GRCm38.p6 Ensembl	8	13,085,374 - 13,104,821 (-)	Ensembl

RefSeq Acc Id:

NM_178708 ⟹ NP_848823

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	13,127,525 - 13,155,343 (-)	NCBI
GRCm38	8	13,077,525 - 13,105,343 (-)	NCBI
MGSCv37	8	13,077,525 - 13,105,343 (-)	RGD
Celera	8	13,244,463 - 13,272,258 (-)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

GGATGCTCAGGGATGCTGCTCCGTGCGCTAGCGCGCCGAGGGGTTGGGGACGGGATGCTCTGCA
CCCATTTATCTGGGGTGCCCCAGTGTGAGATGTGGGAGGACTCAGGAACACATCCTAGGAGTGC
GCGGGACGCCTTCCCAGTGGGCTCTGGACTTTGGTTCCGGGAGAGTCAGGAGCGCCTCTGCACA
CGGAGGGTTGGGGATCGGGTCACCCTCATGGGAGAGGGGTGCGAGGAATCGGGTCGCTAGCACA
CCGACGTGACCAGGGACACGTTCCCAAGTCGGTTGGGAACTCCTCCACGTCAGTCCTCCGCCCT
CGCGCGCGCCCCCGCCGCACCCGAGGCGTCCCGGCGACCGCGCTGACAGCTGCCCCCAAAGAAG
TGCTCTCACCACCGGCTCGGCTCGGCTCGGCTCGGCTCGCTCCACCTTCACCCGCTCCGGAACC
AACGTGCAGAGGTTACCGTGTGGGGACAAGGAGCGGAAACGGACCTGCGCCGGAAGTGAGGCAC
TCAACACCCGCGGCCGCCGCTATGGCGCACATCACCATTAACCAGTACCTACAGCAGGTATATG
AAGCCATCGACACCAGAGATGGAGCATCCTGTGCAGAGCTGGTATCCTTTAAGCACCCTCATGT
TGCGAACCCACGGCTCCAGATGGCCTCTCCAGAAGAGAAATGCCAGCAAGTTCTGGAGCCCCCA
TATGATGAAATGTTTGCAGCTCATTTAAGGTGTACCTATGCTGTGGGGAATCACGACTTCATAG
AAGCGTACAAGTGCCAGACGGTGATAGTCCAATCATTCCTCCGGGCATTCCAGGCTCACAAAGA
GGAAAACTGGGCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTTCGGATATTTGCCAATAAT
GCAGACCAGCAGTTGGTAAAGAAAGGGAAGAGCAAAGTTGGAGACATGCTGGAAAAAGCTGCCG
AGCTGCTGATGAGCTGCTTCCGAGTCTGTGCCAGTGACACCCGTGCCGGCATAGAAGACTCTAA
GAAGTGGGGGATGCTGTTCCTGGTGAACCAGCTATTTAAAATCTACTTTAAGATCAACAAACTC
CATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAAAGATGACTATAGCACAG
CGCAGAGGATCACGTACAAGTACTACGTGGGGCGCAAGGCCATGTTTGACAGTGACTTCAAGCA
AGCGGAGGAGTACCTGTCGTTTGCCTTTGAACACTGCCATCGCTCCAGCCAGAAGAACAAGAGG
ATGATTCTGATCTACCTGCTGCCAGTGAAGATGCTGCTGGGTCACATGCCGACCATCGAGCTCC
TGAGGAAATACCACCTGATGCAGTTTTCAGAAGTGACCAAAGCCGTCAGTGAGGGCAACCTGCT
GCTGCTCAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCATCCGCTGTGGCATCTTCCTCATC
CTGGAGAAGCTGAAGATCATCACGTACAGGAACCTCTTCAAGAAAGTGTATTTGTTACTCAAGA
CACATCAGCTGTCCCTAGACGCCTTTCTGGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGA
CATTGACGAGGTCCAGTGCATTCTGGCCAACTTGATATACATGGGTCACATTAAAGGCTACATC
TCCCATCAGCATCAGAAACTGGTCGTCAGCAAGCAGAACCCTTTCCCTCCGCTGTCCACAGTGT
GCTGATGCCCAGGCCTTGCCAACAGCGTGCTCCTGCTACCGCTGCCCGCTGGAGCTCACATCTC
CTGGTGCAGTCGCCAGCACCTGAGGCACTCACTGTGGTTTCCAGTGTCCTAACTCATGCCAGCC
TTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCTCC
TGAGCGTCCGGGAAGGAGACAGCTGGGCTTCGGTTTGTTTATGGAGGCTACCTTTGTGACATCT
TGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT
CTTTCTTAAAAAGGTAACCCAAGTTTATACAAGTGGCACGAGTTCTTTACTGTCTGTTATGTAA
CACATCTGTTTTCATATGCAAAATGTCAGCATTGTGAGCTCGGAATGCTGGGTTAACTTGAGGC
TTCTTTTTAAAAGTAGAATTTAGGGGGAGGAGAGACGGTTCAGGCGAGAACAGCTACTGCTCTG
CCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCT
AGGGGACCCATTGCCTTCGTTGGCCTCCACGGGCTCCTGCACACGTGTACAAAAGCTCACTCAG
GCAAACAGGCATGCATACATAAATAAATACACCTTTTTTT

hide sequence

RefSeq Acc Id:

XM_006508761 ⟹ XP_006508824

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	13,125,476 - 13,140,164 (-)	NCBI
GRCm38	8	13,075,476 - 13,090,102 (-)	NCBI

Sequence:

show sequence

TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATTTTTGAGACAGGGTTTCTGTGTGGCCCTGG
CTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCATAAATCCACTGCTTCTGCCT
CCCAAGTGCGAGGATTAAAGGTCTGCACTCCCACTGCCCAGCTTGCTTATTATATTTTTTAATA
TTTAATTTTTATATCCTTTTGATCACTCCCCCACTTTTATTTTGTGTAATTTGTCTTAGCTGGT
TTGCAACACAGCTGGTTTAATTTTTTTCTTAACCTTCTGTCAGAAAGTGTTTCCATCTTTTTCC
TAAAACTATCTCCACCAATCATTCCATCATGTTATTTGATTATGCGTTTACAGGAAATGGACTC
GTGTTAAGTTGAGCATGGTTTTGCTGTATTATCCTCGCTGCCCTCCCATGGTTGAAGGTCTAAG
CTGTCTCAAGGCTTTCCTTTCCCCCGTATTCTAATTGGCTGGTTTGTGTTGCTGTTGCTGTTTT
GTTTTTGTGATTGGAGACCCTGGCTGTCTTTGTGTCCTCCCGTGATTAGAGGTCTCGGCTGTTT
CTCACTTCTCACCACCAGTCTTAACTGACTGTAGGTGAAGGTCTCAGCCATCTCTAGGCTCTCA
CTGCCCATCCCACGGTGGATGGAGTTTCTGCCCATAAGCTCCCACAGTGCAGTGCACTTAGCAC
TGTCATGTGTGGATGCTGGTGACTAAAGACAGAGGGGACAACTGAGGAAGGCTCCTTGTCTCTC
ACCATCTGTTTCCTGCCATAGTAGCTTGATATCTGTTTATTGAATGGACAGTTGAGGTCCTTGT
GGTTCTGTACAACAACCCCTCCTTGATCTTTGAACTCTCGGTGGTTTCTCATCAGATTGCAAAA
AAACCAAGCAGAGTAAAAACACCTGTGTTTCAAAGGACACTGCCACAAGTCAAACAGCCATATT
TGAAAAACATTTGAAATAACATACCGATAAAGGTCTAATATGGGCTCTACAGTGAACTGTTAGA
ACTGAAGGGCAGCCCATGCTTAAATGAACACTCCTTGGTTTTTTGTTTTTGTTTTTGTTTTTAA
GACAGGATTTCTCTGGGTAGTCCCAGCTGTCCTGGAATTTATAGACCAAGCTGGCCTCAAACTC
ACAAAGATCTACCTGCTTCTGTGAGTGCTAGGATTAAAGGTGTATTTTACATGCCCAGCTGTAA
TGATCTATATATTTGAAAAATCTTGAGAGGGGGGAGAGAGAGAGAGAGAGAGAGGAAGAAGAAA
AAAAGACAGGTTTCTAGTGAGCAGGTCCTAGCCCGCTCTAAATCAGCAGTATCCGAGGCCACAG
TGAGCTGCCTCCTATGCCCGTTACAATGGCTGTGATCACAGAGTAGGAAGTGCACACTACTGAG
GGCCATGTGCCACAGTAGCCAGATGCTGCCCGGAAGGCAGGCAAACTGAGCAGTCTCCTGGGCT
TTGCCTTTTCTTGTGCCTCCTGGGCCAGGTCAGCAAGGCAGTACCAGTGTGGCTCACCCGTGCT
TGCCTATTCATTTCTCACTGCCTGAGTTTGCTTTCTGAGTTTGAGTTTCTGCTGTGACTCTTCA
AGTAGATTGAACATCTAAATTCTTTATCACACTTGGGTGTGAGAACATTGACCTAGCGAGCAAG
TGTCTTTTTGGGCTACCGGTTGGAACAATTTATGAGAGAGAGCAGGTAGAGCAGCTAGCTGGGC
AGCTGGCATAGAGCAGGCCTTGTTCTGTGGACAGCGGACAGCATTTACACCAGTGTCATTGGAG
ACAGTTCACTTCCCTGCCATGAGTACCCTGCAGTTTCTGCTGTGTCCTGAGTTTGAGCTCTGAG
TCCCATGTTCCCAGAAGCTGCCACTGGTCCAGCACCCCTGCAGTCAGGGACTACTTGGAGGGGA
GTCACAGAACTAATTCAACTCTGAGTTTTGTTTTCCCAATGTTTTATCATGAACATCTACAAAT
ATTCAGCAGAATTGAGGTAATTTTATAGGACGACCTCTAACTACCACTTCTGTGAGTTTATTAC
GCTTGTTCTTGTCTGTGTCTTCTCCCTGTCCATTTGTCAAATTATCTCAATATTTCTCTTCATC
CTTTTTTTAGAAAAAGCACATTTTTATACACATTTTCCTCCAAGGACTCCAAGTTCCTGTTTGA
CTTTTGGGGTGAAGTAGACCTTCAGAACCACACAGACCCTGCTGTGCTGAGTTTGACGTTGGCG
CCTTTGGTAGGGCCTGGTCAGCAGTGTCCTGGCGTTTCTTCACCAGGGCCACTCAGTTGTTATT
TACCGTAAGGTCACCTGTGAGAGCTTCTGCAGAGGGTTTGTCACTCTCTGTGACTCCCTCCTTG
GGCTCCTCCTTATGTGTTTACAGAGGATTTTTGTGGTGCTGTTGCTAGGAAAAAAAAATGTTCT
TCCAAAAATGCCTCCTATCAATCTCCACCTATAGAGTTTTGCTAATGCTGCAGAGGGCCTGCAG
TTGTTTAACGGGGTTAGAATTCTGGGGCTGCTTTTTCTTCTCTTGGCAGCTGTAGTAAACTTCA
CTGATGGTGTTCAAGAGAATAGACTCCCAAGGGCCCTTTGTCTCTGGATTCTGAGCTAGAAGCC
GTGAGGGCAGATACTCAGGGTAGGGAGCTGACTTGGGACAAGGACGCCTCAACAGCTGAGGTCC
CTCTCTTCCTCTCCGTTCTTTCTGGGGAAAGTGGTCCAGGTCTTCTTGCTCTTGGAGGACATGC
AGGCCGTGAGGTCCACCACCCTGTTGCTGTAGTGTTGTTTGTTGTCATACCAAGAAATGATCTT
TACAGAGTTGTCATTGAGAGAAATGCCAGCCCCAGCATCCAAGGTAAAACGGTGGGTTTCACTG
TTAAAGTCACAGGAGACAGCCTGGTTCTCACTGTAGCCTGGGATGCCCTTCAGTGGGCCTTCTT
CTTGATGCCATCATCCTTGTCAGCTTTCTTCAGGTGGCACAGCAGATCCACAGCAGACATACCG
GGGATAAGAACACAGACGGCCATGCTTGCCCCTGAGCAACCTGTTGGTTCTGGGGTGACCTCGC
GCATAGTCTTGGCAGTACCAGTGAATCCAGGGATGATACTCTGAGTATCCTCAGCCGTATACCA
CGGCTTTCCAGAGGGGCTGTCCACAGTCTTGTGGATGGCGGTGATAGCGTGGATGACCTCAGCC
GTCCGTGACGGGGCTGAACAAGGTGGAGGTGCAGGAGACATTGCTAACAAAGCTGAGAGAGTTA
TCCTACTTGTCACGGTTCACACCTATCACAGTCACAGGGTCATCAGCACAAGGTAGATAGGATA
ACCTTTTGTCTCTATTCTCCATGATGGTGAAGACACAGTAAGCTCCACAACACAGTGGGCACCA
GCACCGCCTCATCTGATGTTGGCCGGATTTCACTCCTGGAAGATGGAGCTGGCCTTCCCATTGA
TGACAGGTTTCCTGTTCTGTCTTGACTGTGCCATGGAACTTGCTGTGGATAGAGTTGTGCTGGG
ACATGGAGACCTTGAGGTCAATGAGGGGGTCACTGATGGCAGCGACATCCACAACAGTCAGCAC
GGAAGGCAGCTCTGGTGACCAGCCGTGCCGGCATAGAAGACTCTAAGAAGTGGGGGATGCTGTT
CCTGGTGAACCAGCTATTTAAAATCTACTTTAAGATCAACAAACTCCATTTGTGTAAACCTCTT
ATCAGAGCCATCGACAGCTCGAATCTGAAAGATGACTATAGCACAGCGCAGAGGATCACGTACA
AGTACTACGTGGGGCGCAAGGCCATGTTTGACAGTGACTTCAAGCAAGCGGAGGAGTACCTGTC
GTTTGCCTTTGAACACTGCCATCGCTCCAGCCAGAAGAACAAGAGGATGATTCTGATCTACCTG
CTGCCAGTGAAGATGCTGCTGGGTCACATGCCGACCATCGAGCTCCTGAGGAAATACCACCTGA
TGCAGTTTTCAGAAGTGACCAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAATGAGGCGCT
GGCAAAGCACGAGACGTTCTTCATCCGCTGTGGCATCTTCCTCATCCTGGAGAAGCTGAAGATC
ATCACGTACAGGAACCTCTTCAAGAAAGTGTATTTGTTACTCAAGACACATCAGCTGTCCCTAG
ACGCCTTTCTGGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGACATTGACGAGGTCCAGTG
CATTCTGGCCAACTTGATATACATGGGTCACATTAAAGGCTACATCTCCCATCAGCATCAGAAA
CTGGTCGTCAGCAAGCAGAACCCTTTCCCTCCGCTGTCCACAGTGTGCTGATGCCCAGGCCTTG
CCAACAGCGTGCTCCTGCTACCGCTGCCCGCTGGAGCTCACATCTCCTGGTGCAGTCGCCAGCA
CCTGAGGCACTCACTGTGGTTTCCAGTGTCCTAACTCATGCCAGCCTTGCCAAGACCTGGAGTT
CTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTCCGGGAAGGAG
ACAGCTGGGCTTCGGTTTGTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCTC
CCTCCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAAC
CCAAGTTTATACAAGTGGCACGAGTTCTTTACTGTCTGTTATGTAACACATCTGTTTTCATATG
CAAAATGTCAGCATTGTGAGCTCGGAATGCTGGGTTAACTTGAGGCTTCTTTTTAAAAGTAGAA
TTTAGGGGGAGGAGAGACGGTTCAGGCGAGAACAGCTACTGCTCTGCCAGAGGATGTGTGTTTG
ATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCTAGGGGACCCATTGCCTTC
GTTGGCCTCCACGGGCTCCTGCACACGTGTACAAAAGCTCACTCAGGCAAACAGGCATGCATAC
ATAAATAAATACACCTTTTTTTAAGAAAAGCAAGAGTTAGTCTAATGTAAATTCCAACAGTTGT
AAAGGCTGTGCAGTACTAAGACAGGACCTGGCTGTTGGGCTCTGGTTATGGCCCCTTCTGAGCC
TTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCCTCACCCTGCAGCTTC
ATCCAGCTTAGCCCCTTCCAGAGACCCTTCCTCTAGACAGTTAGCCTGGGTGGGCTTCAGCAGA
GGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCAGCTCTCCCTCTTCCTTCCTCCT
CCTCTTCCTTTTTTTAAATAAATAGTTTATTTATTTTATGTGCATTTGTGTTTTGTCCGCATGT
ATGTCTGTTTGAGGGGGGTCAGATCCTGGAGTTACAAATAGCTGTGGATGTTGGGAATTGAACC
CAAGTCCTCTGGAAGAGCAGCTAGTGTTCCTTACCACTGAGCCAGCTCTCCAGCCCCTAATACT
CCAACTTCTTAAGAGTGTCTGTTTCCTCTGTGTGTTGTTTATTTTGTTCACTTGTCTATCATCT
CTGTATTTCTCTGCCTGCCCGCCCACCCGCACATCTGTCCATCCATTTGTCTGTCTGAGGTAGG
GTCTCTTTATATAGCCTGGCTGGCCTGGAACTCTATGTAGACCATGCTTCCACATGATGCTATT
CTTGCCTCTGTGTCCCCAGACCAGGTGGGTGCCACGATGTGAGGCTTGTCCCCCGTTTATGAGA
AGTGCACTAATGTGGAAAGGCTAACAATTTGTTAGTCTCTGCAGAGTTTTTGTAGTCAGAAGCC
ATTCCTTTTGCAGACGAACTGTGGGGGAGCTTACGTGGTCTCCACGGGGCATGGTGCAGGACGT
CCCCTTACGTGGCTGCTTCATTAGCATCCTCTTGCAGGATGGCAAAATCACCCAAACTATGCCA
TGAGGCATCAATATCCTGACTTTATCCCAAATCTTTGCCTGGTCAAGGCTTTGTGGCTTTAGGC
AACTGCTCCATGTGATGGTCCTGGGGGCTAGAAGGTGGCTCACTCCTGAATATGGGCTTGGATA
TTGGGCTCAGTGGGGTGGGCGTGGACAGCTTGTATTCTCCATGTGGCCATCTCCAGCAGCTAAA
GCTGGGTTCCAGAACAGGGCCAAAGGAAGAGGTGCCTGTGGTATGAATTGTACCACTTTCCAGC
TGAGAACACTGCCTTTGCCATGTCCATGGTCATGTCCCTACTCTCTGAACCATTCGCCCACGGT
GTGCAGAGAGGCATCTGGCATTGAGCGTGGCCCCTCATAGGCTGGTAGAGCTTATGAGCTCCAC
CAAGGCTAAGCCTGCCCTCCTGTGTCCTCTGTGTCCATGTCTATGGTGTTACCTCCTGCAGAGC
TGCCATGAAGAGCTGATCCAGTAGAGTGGTATCCTTGTAACCATTCAAATATTAGGGTTGCTAT
GAGCGTCCAGGGTCCCATAGTTCTGAGTTTAGAAGCAACAGAATCAACTTTTCAGGCTGCTCCA
GGTAATTTATTAAACAGTGACGTCGTAAGTCAGAACCTGATTGAAGTGACGAATAGTTGAATTT
AGAAATTAAAGAAGCAACCTCTCTACAGTGTGTGCTGTGTCCACAGTATGTGTCTGTGTGCTGT
CTCCACACTGTGTGCTGTGTCCACAGTGTGTGTCTGTGTGCTGTCTCCACACTGTGTGCTGTGT
CCACAGTGTGTGTCTGTGTGCTGTCTCCACACTGTTTGTCTGTGTGATGTCTCCACAGTGTGTG
CTGTGTGCTGTCTCCACACTGTGTGCTGTCTTCACACTGTGTGCTGTCTCCACAGTGTGTGTCT
GTGTGATGTCTCCACAGTGTGTGTCTGTGTGCTGTCTCCACACTGTGTGTCTGTGTGATGTCTC
CACAGTGTGTGCTGTGTGATGTCTCCACAGTGTGTGTCTGTGTGCTGTCTCCACACTGTGCTGT
GTGCTGTCTCTGGTGTCCTAGTTCGTGGGCACACAGACCCATACATTATTGTAACTAGTTTGCA
TCAACATTAAATACTCACACTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_848823	(Get FASTA)	NCBI Sequence Viewer
	XP_006508824	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH06047	(Get FASTA)	NCBI Sequence Viewer
	AAI18534	(Get FASTA)	NCBI Sequence Viewer
	BAC31414	(Get FASTA)	NCBI Sequence Viewer
	BAC32494	(Get FASTA)	NCBI Sequence Viewer
	BAC33434	(Get FASTA)	NCBI Sequence Viewer
	BAC38672	(Get FASTA)	NCBI Sequence Viewer
	BAE37463	(Get FASTA)	NCBI Sequence Viewer
	EDL22115	(Get FASTA)	NCBI Sequence Viewer
	EDL22116	(Get FASTA)	NCBI Sequence Viewer
	EDL22117	(Get FASTA)	NCBI Sequence Viewer
	EDL22118	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000127622.2
	ENSMUSP00000128207.2
	ENSMUSP00000130059.2
	ENSMUSP00000133204
	ENSMUSP00000133204.2
GenBank Protein	Q8BFV2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_848823 ⟸ NM_178708

- UniProtKB:

Q147Z6 (UniProtKB/Swiss-Prot), Q8C951 (UniProtKB/Swiss-Prot), Q8BFV2 (UniProtKB/Swiss-Prot), A0JLQ7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAHITINQYLQQVYEAIDTRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAA
HLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVK
KGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI
RAIDSSNLKDDYSTAQRITYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLL
PVKMLLGHMPTIELLRKYHLMQFSEVTKAVSEGNLLLLNEALAKHETFFIRCGIFLILEKLKII
TYRNLFKKVYLLLKTHQLSLDAFLVALKFMHVEDVDIDEVQCILANLIYMGHIKGYISHQHQKL
VVSKQNPFPPLSTVC

hide sequence

RefSeq Acc Id:

XP_006508824 ⟸ XM_006508761

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRITYKYYVGRKAMFDSDFKQAEE
YLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFSEVTKAVSEGNLLLLN
EALAKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMHVEDVDIDE
VQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC

hide sequence

Ensembl Acc Id:

ENSMUSP00000133204 ⟸ ENSMUST00000164416

Ensembl Acc Id:

ENSMUSP00000127622 ⟸ ENSMUST00000172443

Ensembl Acc Id:

ENSMUSP00000128207 ⟸ ENSMUST00000168164

Ensembl Acc Id:

ENSMUSP00000130059 ⟸ ENSMUST00000167198

Protein Domains

PCI

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8BFV2-F1-model_v2	AlphaFold	Q8BFV2	1-399	view protein structure

Promoters

RGD ID:

6843586

Promoter ID:

MM_KWN:53681

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000046904, ENSMUST00000121426, NM_178708, OTTMUST00000076734, OTTMUST00000076736, OTTMUST00000076769

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	8	13,104,701 - 13,106,112 (-)	MPROMDB

RGD ID:

8666477

Promoter ID:

EPDNEW_M11270

Type:

multiple initiation site

Name:

Pcid2_1

Description:

Mus musculus PCI domain containing 2 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M11271

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	13,104,833 - 13,104,893	EPDNEW

RGD ID:

8666481

Promoter ID:

EPDNEW_M11271

Type:

multiple initiation site

Name:

Pcid2_2

Description:

Mus musculus PCI domain containing 2 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M11270

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	13,105,360 - 13,105,420	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2443003	AgrOrtholog
Ensembl Genes	ENSMUSG00000038542	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000164416	ENTREZGENE
	ENSMUST00000164416.8	UniProtKB/Swiss-Prot
	ENSMUST00000167198.2	UniProtKB/TrEMBL
	ENSMUST00000168164.8	UniProtKB/TrEMBL
	ENSMUST00000172443.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Csn12-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PCI_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	WH-like_DNA-bd_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:234069	UniProtKB/Swiss-Prot
MGD	MGI:2443003	ENTREZGENE
NCBI Gene	234069	ENTREZGENE
PANTHER	PCI DOMAIN-CONTAINING PROTEIN 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR12732	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	PCI	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Pcid2	PhenoGen
PROSITE	PCI	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	PAM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0JLQ7	ENTREZGENE, UniProtKB/TrEMBL
	E9Q1H5_MOUSE	UniProtKB/TrEMBL
	E9Q5V9_MOUSE	UniProtKB/TrEMBL
	F6QZZ3_MOUSE	UniProtKB/TrEMBL
	PCID2_MOUSE	UniProtKB/Swiss-Prot
	Q147Z6	ENTREZGENE
	Q8BFV2	ENTREZGENE
	Q8BNM3_MOUSE	UniProtKB/TrEMBL
	Q8C951	ENTREZGENE
UniProt Secondary	Q147Z6	UniProtKB/Swiss-Prot
	Q8C951	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype