Cnot2 (CCR4-NOT transcription complex, subunit 2) - Rat Genome Database
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Gene: Cnot2 (CCR4-NOT transcription complex, subunit 2) Mus musculus
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Symbol: Cnot2
Name: CCR4-NOT transcription complex, subunit 2
RGD ID: 1323254
Description: Predicted to have RNA polymerase II transcription corepressor binding activity and poly(A)-specific ribonuclease activity. Involved in regulation of stem cell population maintenance and trophectodermal cell differentiation. Predicted to localize to several cellular components, including CCR4-NOT core complex; P-body; and nucleoplasm. Is expressed in several structures, including 1st branchial arch; brain; genitourinary system; hemolymphoid system gland; and intestine. Orthologous to human CNOT2 (CCR4-NOT transcription complex subunit 2); PARTICIPATES IN microRNA pathway; INTERACTS WITH (-)-epigallocatechin 3-gallate; 1,2-dimethylhydrazine; 1,3-dichloropropan-2-ol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2600016M12Rik; 2810470K03Rik; AA537049; AA959607; AW557563; C79650; CCR4-associated factor 2; CCR4-NOT transcription complex subunit 2; MGC115808
Orthologs:
Homo sapiens (human) : CNOT2 (CCR4-NOT transcription complex subunit 2)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Cnot2 (CCR4-NOT transcription complex, subunit 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cnot2 (CCR4-NOT transcription complex subunit 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CNOT2 (CCR4-NOT transcription complex subunit 2)
Canis lupus familiaris (dog) : CNOT2 (CCR4-NOT transcription complex subunit 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cnot2 (CCR4-NOT transcription complex subunit 2)
Sus scrofa (pig) : CNOT2 (CCR4-NOT transcription complex subunit 2)
Chlorocebus sabaeus (African green monkey) : CNOT2 (CCR4-NOT transcription complex subunit 2)
Heterocephalus glaber (naked mole-rat) : Cnot2 (CCR4-NOT transcription complex subunit 2)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910116,321,065 - 116,418,891 (-)NCBI
GRCm3810116,485,160 - 116,581,900 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10116,485,161 - 116,581,511 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710115,922,217 - 116,018,567 (-)NCBIGRCm37mm9NCBIm37
MGSCv3610115,889,276 - 115,985,621 (-)NCBImm8
Celera10118,426,741 - 118,523,052 (-)NCBICelera
Cytogenetic Map10D2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334  
PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18287559   PMID:18799693   PMID:20059953   PMID:20412781   PMID:21267068   PMID:21677750   PMID:21741365  
PMID:21873635   PMID:22367759   PMID:24200330   PMID:26496610   PMID:27899360   PMID:30457570   PMID:30733279  


Genomics

Comparative Map Data
Cnot2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910116,321,065 - 116,418,891 (-)NCBI
GRCm3810116,485,160 - 116,581,900 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10116,485,161 - 116,581,511 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710115,922,217 - 116,018,567 (-)NCBIGRCm37mm9NCBIm37
MGSCv3610115,889,276 - 115,985,621 (-)NCBImm8
Celera10118,426,741 - 118,523,052 (-)NCBICelera
Cytogenetic Map10D2NCBI
CNOT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1270,242,994 - 70,354,993 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1270,242,994 - 70,355,257 (+)EnsemblGRCh38hg38GRCh38
GRCh381270,242,993 - 70,354,993 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371270,636,774 - 70,748,773 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361268,923,044 - 69,035,040 (+)NCBINCBI36hg18NCBI36
Build 341268,923,488 - 69,033,960NCBI
Celera1270,300,448 - 70,412,447 (+)NCBI
Cytogenetic Map12q15NCBI
HuRef1267,686,934 - 67,798,932 (+)NCBIHuRef
CHM1_11270,606,077 - 70,718,081 (+)NCBICHM1_1
Cnot2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0759,526,105 - 59,617,307 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl759,527,124 - 59,587,385 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0759,537,579 - 59,628,786 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4755,823,982 - 55,880,812 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1755,844,724 - 55,901,542 (-)NCBI
Celera748,914,667 - 48,971,519 (-)NCBICelera
Cytogenetic Map7q22NCBI
Cnot2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540510,451,414 - 10,547,229 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540510,451,414 - 10,547,229 (+)NCBIChiLan1.0ChiLan1.0
CNOT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11270,520,722 - 70,633,149 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1270,520,722 - 70,633,149 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01267,753,703 - 67,865,375 (+)NCBIMhudiblu_PPA_v0panPan3
CNOT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1012,009,762 - 12,172,427 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11012,057,269 - 12,174,405 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Cnot2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365457,938,934 - 8,040,409 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNOT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl534,426,394 - 34,549,313 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1534,470,911 - 34,548,968 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2537,132,108 - 37,207,783 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CNOT2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1165,861,353 - 65,934,042 (+)Ensembl
ChlSab1.11165,823,294 - 65,932,588 (+)NCBI
Cnot2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475027,433,671 - 27,529,545 (-)NCBI

Position Markers
RH126708  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,485,995 - 116,486,206UniSTSGRCm38
MGSCv3710115,923,051 - 115,923,262UniSTSGRCm37
Celera10118,427,575 - 118,427,786UniSTS
Cytogenetic Map10D2UniSTS
Whitehead/MRC_RH101312.23UniSTS
RH136131  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,518,859 - 116,519,035UniSTSGRCm38
MGSCv3710115,955,915 - 115,956,091UniSTSGRCm37
Celera10118,460,456 - 118,460,632UniSTS
Cytogenetic Map10D2UniSTS
RH136541  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,498,751 - 116,498,991UniSTSGRCm38
MGSCv3710115,935,807 - 115,936,047UniSTSGRCm37
Celera10118,440,331 - 118,440,571UniSTS
Cytogenetic Map10D2UniSTS
AA959607  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,485,658 - 116,485,743UniSTSGRCm38
MGSCv3710115,922,714 - 115,922,799UniSTSGRCm37
Celera10118,427,238 - 118,427,323UniSTS
Cytogenetic Map10D2UniSTS
Whitehead/MRC_RH101227.07UniSTS
Whitehead/MRC_RH101226.47UniSTS
RH124513  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,485,656 - 116,485,747UniSTSGRCm38
MGSCv3710115,922,712 - 115,922,803UniSTSGRCm37
Celera10118,427,236 - 118,427,327UniSTS
Cytogenetic Map10D2UniSTS
UniSTS:236463  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810116,582,360 - 116,582,565UniSTSGRCm38
MGSCv3710116,019,416 - 116,019,621UniSTSGRCm37
Celera10118,523,901 - 118,524,106UniSTS
Cytogenetic Map10D2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018383585125739363Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1019000000129800000Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024800000121200000Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039300000129800000Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039300000129800000Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045600000120800000Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059500000122500000Mouse
13208560Wght9_mweight 9 (mouse)1060000000121000000Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1068000000125000000Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069900000132500000Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1074151384125680038Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1074151384125680038Mouse
10043881Adip24_madiposity 24 (mouse)Not determined1082556941116557090Mouse
4141054mwfh_mmodifier of white forlock hypopigmentation (mouse)Not determined83181141117181274Mouse
1357779Tesq3_mtestis weight QTL 3 (mouse)Not determined1084243786122205623Mouse
4141479W10q8_mweight 10 weeks QTL 8 (mouse)Not determined84243786122205623Mouse
4141387Lgaq5_mlate growth adjusted QTL 5 (mouse)Not determined84243786122205623Mouse
4142496W6q8_mweight 6 weeks QTL 8 (mouse)Not determined84243786122205623Mouse
4142365Egq9_mearly growth QTL 9 (mouse)Not determined84243786122205623Mouse
1357594Estoq3_membryo survival total QTL 3 (mouse)Not determined1084243786122205623Mouse
1357622Espq3_membryo survival preimplantation QTL 3 (mouse)Not determined1084243786122205623Mouse
1357638Cia29_mcollagen induced arthritis 29 (mouse)Not determined1085619118118661448Mouse
1300797Sluc22_msusceptibility to lung cancer 22 (mouse)Not determined1086877747120877895Mouse
1301520Uvbi1_mUVB induced immunosuppression 1 (mouse)Not determined1087073224121073368Mouse
1300908Insq4_minsulin QTL 4 (mouse)Not determined1087073224121073368Mouse
1300921Skl4_mskeletal size (tail length) 4 (mouse)Not determined1088252393122252530Mouse
4142386Tgq20_mtriglyceride QTL 20 (mouse)Not determined89000595123000595Mouse
1301758Fcsa3_mfemoral cross-sectional area 3 (mouse)Not determined1090091790124091893Mouse
11039516Ltpr5_mLeishmania tropica response 5 (mouse)1090671039125739363Mouse
13208554Lgth11_mbody length 11 (mouse)1091000000121000000Mouse
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097381196130694993Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097381196130694993Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397381196130694993Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097381196130694993Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097700000130694993Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97922739130694993Mouse
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099384730130694993Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099384730130694993Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099384730130694993Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10101150611130694993Mouse
1357744Cfbw4_mcystic fibrosis body weight 4 (mouse)Not determined10101150611130694993Mouse
1301901Im5_mimmunoregulatory 5 (mouse)Not determined10101661259130694993Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101661259130694993Mouse
1300678Leg2_mlongevity extending gene 2 (mouse)Not determined10102671003130694993Mouse
27226725Tibw1_mtibia width 1, proximal, 5 week (mouse)10102900000123400000Mouse
1301895Exq1_mexploratory and excitability QTL 1 (mouse)Not determined10103011947130694993Mouse
14696727Kidrq2_mkidney weight, right QTL 2 (mouse)10103066603130694993Mouse
4141007Obrq10_mobesity resistance QTL 10 (mouse)Not determined103407822130694993Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104274116130694993Mouse
14746996Manh69_mmandible shape 69 (mouse)10104927733130694993Mouse
1357482Nhdlq4_mnon-HDL QTL 4 (mouse)Not determined10105205399130694993Mouse
1300679Nociq2_mnociceptive sensitivity inflammatory QTL 2 (mouse)Not determined10105205399130694993Mouse
1302200Sle12_msystematic lupus erythematosus susceptibility 12 (mouse)Not determined10105205399130694993Mouse
4141269Ipng2_mimprinted postnatal growth 2 (mouse)Not determined105252393118661448Mouse
11040594Lmr5f_mleishmaniasis resistance 5f (mouse)10105343808130694993Mouse
11040596Lmr5d_mleishmaniasis resistance 5d (mouse)10105343808130694993Mouse
11040598Lmr5b_mleishmaniasis resistance 5b (mouse)10105343808130694993Mouse
4142089Obrq9_mobesity resistance QTL 9 (mouse)Not determined108680038130694993Mouse
4141153Ltgq2_mliver triglyceride QTL 2 (mouse)Not determined108680038130694993Mouse
11039496Ltpr5b_mLeishmania tropica response 5b (mouse)10108739225130694993Mouse
11041664Lmr25_mleishmaniasis resistance 25 (mouse)10108739225130694993Mouse
11049563Lmr25a_mleishmaniasis resistance 25a (mouse)10108739225130694993Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108739225130694993Mouse
27226722Tibw7_mtibia width 7, proximal, 16 week (mouse)10108800000125600000Mouse
27095902Scvln11_msacral vertebrae length 2, 10 week (mouse)10110200000125600000Mouse
11353822Insq12_minsulin QTL 12 (mouse)10110617486125680038Mouse
11353823Homaq2_mhomeostatic model assessment QTL 2 (mouse)10110617486125680038Mouse
10412078Hylaq3_mHyperlocomotor activity related QTL 3 (mouse)Not determined10111732321118150744Mouse
26884391Skwq11_mskull length QTL 11, 16 week (mouse)10113700000121800000Mouse
26884433Zlq2_mzygomatic length QTL 2, 5 week (mouse)10113700000125900000Mouse
4141242Psrs2_mpsoriasis susceptibility 2 (mouse)Not determined10114381196118661448Mouse
26884383Bzwq3_mbi-zygomatic width QTL 3, 5 week (mouse)10114400000122900000Mouse
13506931Recrq11_mrecombination rate in male meiosis QTL 11 (mouse)10114500000123800000Mouse
26884377Skwq3_mskull length QTL 3, 5 week (mouse)10114800000122900000Mouse
1300796Lmr5_mleishmaniasis resistance 5 (mouse)Not determined10116384730122343923Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2886
Count of miRNA genes:753
Interacting mature miRNAs:932
Transcripts:ENSMUST00000020374, ENSMUST00000105265, ENSMUST00000105267, ENSMUST00000164088, ENSMUST00000164383, ENSMUST00000165527, ENSMUST00000166166, ENSMUST00000167644, ENSMUST00000167706, ENSMUST00000168036, ENSMUST00000169507, ENSMUST00000169576, ENSMUST00000169921, ENSMUST00000169937, ENSMUST00000171214, ENSMUST00000171944
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001037846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001037847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001037848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC139376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI428917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB345568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB353467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG067916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM245866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD578905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX562783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY499703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000020374   ⟹   ENSMUSP00000020374
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,509,791 - 116,581,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105265   ⟹   ENSMUSP00000100900
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,485,509 - 116,581,501 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105267   ⟹   ENSMUSP00000100902
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,485,166 - 116,581,500 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164088   ⟹   ENSMUSP00000127830
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,485,165 - 116,549,163 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164383
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,499,369 - 116,581,490 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165527
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,509,791 - 116,581,496 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166166
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,499,374 - 116,581,485 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167644
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,510,160 - 116,581,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167706   ⟹   ENSMUSP00000128837
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,486,197 - 116,581,502 (-)Ensembl
RefSeq Acc Id: ENSMUST00000168036   ⟹   ENSMUSP00000132315
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,485,161 - 116,581,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169507   ⟹   ENSMUSP00000128720
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,504,040 - 116,581,465 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169576   ⟹   ENSMUSP00000130192
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,485,165 - 116,581,496 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169921   ⟹   ENSMUSP00000132152
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,485,787 - 116,581,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169937
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,498,088 - 116,581,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171214
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,498,338 - 116,581,493 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171944
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,506,381 - 116,581,491 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218490   ⟹   ENSMUSP00000151847
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,506,232 - 116,580,538 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218744   ⟹   ENSMUSP00000151501
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,517,321 - 116,581,428 (-)Ensembl
RefSeq Acc Id: ENSMUST00000219544
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10116,497,985 - 116,499,478 (-)Ensembl
RefSeq Acc Id: NM_001037846   ⟹   NP_001032935
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,066 - 116,417,416 (-)NCBI
GRCm3810116,485,161 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001037847   ⟹   NP_001032936
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,066 - 116,417,416 (-)NCBI
GRCm3810116,485,161 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001037848   ⟹   NP_001032937
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,345,696 - 116,417,416 (-)NCBI
GRCm3810116,509,791 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001359247   ⟹   NP_001346176
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359248   ⟹   NP_001346177
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,416,441 (-)NCBI
GRCm3810116,485,160 - 116,580,536 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359249   ⟹   NP_001346178
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359250   ⟹   NP_001346179
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,416,441 (-)NCBI
GRCm3810116,485,160 - 116,580,536 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359251   ⟹   NP_001346180
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359252   ⟹   NP_001346181
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,416,441 (-)NCBI
GRCm3810116,485,160 - 116,580,536 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359253   ⟹   NP_001346182
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,363,854 (-)NCBI
GRCm3810116,485,160 - 116,527,949 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001359563   ⟹   NP_001346492
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,065 - 116,417,416 (-)NCBI
GRCm3810116,485,160 - 116,581,511 (-)NCBI
Sequence:
RefSeq Acc Id: NM_028082   ⟹   NP_082358
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,066 - 116,417,416 (-)NCBI
GRCm3810116,485,161 - 116,581,511 (-)NCBI
MGSCv3710115,922,217 - 116,018,567 (-)RGD
Celera10118,426,741 - 118,523,052 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514174   ⟹   XP_006514237
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,897 (-)NCBI
GRCm3810116,485,165 - 116,581,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514175   ⟹   XP_006514238
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,416,500 (-)NCBI
GRCm3810116,485,165 - 116,581,203 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514181   ⟹   XP_006514244
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,802 (-)NCBI
GRCm3810116,485,165 - 116,581,897 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514182   ⟹   XP_006514245
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,433 (-)NCBI
GRCm3810116,485,165 - 116,581,523 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514183   ⟹   XP_006514246
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514184   ⟹   XP_006514247
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,396 (-)NCBI
GRCm3810116,485,165 - 116,581,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514186   ⟹   XP_006514249
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,904 (-)NCBI
GRCm3810116,485,165 - 116,581,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514188   ⟹   XP_006514251
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,418,891 (-)NCBI
GRCm3810116,485,165 - 116,581,830 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514189   ⟹   XP_006514252
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514190   ⟹   XP_006514253
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514191   ⟹   XP_006514254
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,384 (-)NCBI
GRCm3810116,485,165 - 116,581,488 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314107   ⟹   XP_017169596
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314111   ⟹   XP_017169600
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245296   ⟹   XP_030101156
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,416,500 (-)NCBI
GRCm3810116,485,165 - 116,581,204 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245297   ⟹   XP_030101157
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,805 (-)NCBI
GRCm3810116,485,165 - 116,581,900 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245299   ⟹   XP_030101159
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,770 (-)NCBI
GRCm3810116,485,165 - 116,581,500 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245300   ⟹   XP_030101160
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,435 (-)NCBI
GRCm3810116,485,165 - 116,581,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245301   ⟹   XP_030101161
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245302   ⟹   XP_030101162
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
GRCm3810116,485,165 - 116,581,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156033   ⟹   XP_036011926
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,073 (-)NCBI
RefSeq Acc Id: XM_036156034   ⟹   XP_036011927
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,074 - 116,417,079 (-)NCBI
RefSeq Acc Id: XM_036156035   ⟹   XP_036011928
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
RefSeq Acc Id: XM_036156036   ⟹   XP_036011929
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,441 (-)NCBI
RefSeq Acc Id: XM_036156037   ⟹   XP_036011930
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,416,500 (-)NCBI
RefSeq Acc Id: XM_036156038   ⟹   XP_036011931
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,405 (-)NCBI
RefSeq Acc Id: XM_036156039   ⟹   XP_036011932
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,404 (-)NCBI
RefSeq Acc Id: XM_036156040   ⟹   XP_036011933
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,321,070 - 116,417,385 (-)NCBI
RefSeq Acc Id: XM_036156041   ⟹   XP_036011934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910116,346,252 - 116,417,435 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001032935 (Get FASTA)   NCBI Sequence Viewer  
  NP_001032936 (Get FASTA)   NCBI Sequence Viewer  
  NP_001032937 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346176 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346177 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346178 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346179 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346180 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346181 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346182 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346492 (Get FASTA)   NCBI Sequence Viewer  
  NP_082358 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514237 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514238 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514244 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514245 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514246 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514247 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514249 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514251 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514252 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514253 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514254 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169596 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169600 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101156 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101157 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101159 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101160 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101161 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101162 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011926 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011927 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011928 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011929 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011930 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011931 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011932 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011933 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011934 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH43133 (Get FASTA)   NCBI Sequence Viewer  
  AAH63105 (Get FASTA)   NCBI Sequence Viewer  
  AAH65171 (Get FASTA)   NCBI Sequence Viewer  
  AAH90624 (Get FASTA)   NCBI Sequence Viewer  
  AQS27624 (Get FASTA)   NCBI Sequence Viewer  
  BAB27481 (Get FASTA)   NCBI Sequence Viewer  
  BAC37134 (Get FASTA)   NCBI Sequence Viewer  
  BAE29072 (Get FASTA)   NCBI Sequence Viewer  
  BAE39856 (Get FASTA)   NCBI Sequence Viewer  
  EDL21790 (Get FASTA)   NCBI Sequence Viewer  
  EDL21791 (Get FASTA)   NCBI Sequence Viewer  
  EDL21792 (Get FASTA)   NCBI Sequence Viewer  
  EDL21793 (Get FASTA)   NCBI Sequence Viewer  
  EDL21794 (Get FASTA)   NCBI Sequence Viewer  
  EDL21795 (Get FASTA)   NCBI Sequence Viewer  
  EDL21796 (Get FASTA)   NCBI Sequence Viewer  
  EDL21797 (Get FASTA)   NCBI Sequence Viewer  
  EDL21798 (Get FASTA)   NCBI Sequence Viewer  
  EDL21799 (Get FASTA)   NCBI Sequence Viewer  
  EDL21800 (Get FASTA)   NCBI Sequence Viewer  
  EDL21801 (Get FASTA)   NCBI Sequence Viewer  
  EDL21802 (Get FASTA)   NCBI Sequence Viewer  
  EDL21803 (Get FASTA)   NCBI Sequence Viewer  
  Q8C5L3 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001032935   ⟸   NM_001037846
- Peptide Label: isoform a
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_082358   ⟸   NM_028082
- Peptide Label: isoform b
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot),   E9Q027 (UniProtKB/TrEMBL),   Q5CZY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001032936   ⟸   NM_001037847
- Peptide Label: isoform d
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot),   A0A1S6GWJ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001032937   ⟸   NM_001037848
- Peptide Label: isoform c
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot),   H7BWX6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514244   ⟸   XM_006514181
- Peptide Label: isoform X3
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006514237   ⟸   XM_006514174
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006514247   ⟸   XM_006514184
- Peptide Label: isoform X5
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006514254   ⟸   XM_006514191
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006514249   ⟸   XM_006514186
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006514245   ⟸   XM_006514182
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006514252   ⟸   XM_006514189
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006514253   ⟸   XM_006514190
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006514246   ⟸   XM_006514183
- Peptide Label: isoform X5
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006514251   ⟸   XM_006514188
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006514238   ⟸   XM_006514175
- Peptide Label: isoform X2
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017169600   ⟸   XM_017314111
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017169596   ⟸   XM_017314107
- Peptide Label: isoform X3
- UniProtKB: Q8C5L3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001346176   ⟸   NM_001359247
- Peptide Label: isoform e
RefSeq Acc Id: NP_001346492   ⟸   NM_001359563
- Peptide Label: isoform g
RefSeq Acc Id: NP_001346180   ⟸   NM_001359251
- Peptide Label: isoform e
RefSeq Acc Id: NP_001346178   ⟸   NM_001359249
- Peptide Label: isoform e
RefSeq Acc Id: NP_001346179   ⟸   NM_001359250
- Peptide Label: isoform e
RefSeq Acc Id: NP_001346177   ⟸   NM_001359248
- Peptide Label: isoform e
RefSeq Acc Id: NP_001346181   ⟸   NM_001359252
- Peptide Label: isoform e
RefSeq Acc Id: NP_001346182   ⟸   NM_001359253
- Peptide Label: isoform f
RefSeq Acc Id: XP_030101157   ⟸   XM_030245297
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030101162   ⟸   XM_030245302
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030101161   ⟸   XM_030245301
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030101160   ⟸   XM_030245300
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030101159   ⟸   XM_030245299
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030101156   ⟸   XM_030245296
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000151501   ⟸   ENSMUST00000218744
RefSeq Acc Id: ENSMUSP00000151847   ⟸   ENSMUST00000218490
RefSeq Acc Id: ENSMUSP00000100900   ⟸   ENSMUST00000105265
RefSeq Acc Id: ENSMUSP00000100902   ⟸   ENSMUST00000105267
RefSeq Acc Id: ENSMUSP00000127830   ⟸   ENSMUST00000164088
RefSeq Acc Id: ENSMUSP00000020374   ⟸   ENSMUST00000020374
RefSeq Acc Id: ENSMUSP00000130192   ⟸   ENSMUST00000169576
RefSeq Acc Id: ENSMUSP00000128720   ⟸   ENSMUST00000169507
RefSeq Acc Id: ENSMUSP00000132315   ⟸   ENSMUST00000168036
RefSeq Acc Id: ENSMUSP00000128837   ⟸   ENSMUST00000167706
RefSeq Acc Id: ENSMUSP00000132152   ⟸   ENSMUST00000169921
RefSeq Acc Id: XP_036011928   ⟸   XM_036156035
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036011929   ⟸   XM_036156036
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036011931   ⟸   XM_036156038
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011932   ⟸   XM_036156039
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011933   ⟸   XM_036156040
- Peptide Label: isoform X11
RefSeq Acc Id: XP_036011930   ⟸   XM_036156037
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036011927   ⟸   XM_036156034
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036011926   ⟸   XM_036156033
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036011934   ⟸   XM_036156041
- Peptide Label: isoform X12
Protein Domains
NOT2_3_5

Promoters
RGD ID:6819119
Promoter ID:MM_KWN:5666
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000105266
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610115,974,506 - 115,975,006 (-)MPROMDB
RGD ID:8673332
Promoter ID:EPDNEW_M14682
Type:multiple initiation site
Name:Cnot2_2
Description:Mus musculus CCR4-NOT transcription complex, subunit 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14683  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810116,559,278 - 116,559,338EPDNEW
RGD ID:8673304
Promoter ID:EPDNEW_M14683
Type:multiple initiation site
Name:Cnot2_1
Description:Mus musculus CCR4-NOT transcription complex, subunit 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14682  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810116,581,500 - 116,581,560EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919318 AgrOrtholog
Ensembl Genes ENSMUSG00000020166 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000020374 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000100900 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000100902 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000127830 UniProtKB/TrEMBL
  ENSMUSP00000128720 UniProtKB/TrEMBL
  ENSMUSP00000128837 UniProtKB/TrEMBL
  ENSMUSP00000130192 UniProtKB/TrEMBL
  ENSMUSP00000132152 UniProtKB/Swiss-Prot
  ENSMUSP00000132315 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151501 UniProtKB/TrEMBL
  ENSMUSP00000151847 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020374 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000105265 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000105267 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000164088 UniProtKB/TrEMBL
  ENSMUST00000167706 UniProtKB/TrEMBL
  ENSMUST00000168036 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000169507 UniProtKB/TrEMBL
  ENSMUST00000169576 UniProtKB/TrEMBL
  ENSMUST00000169921 UniProtKB/Swiss-Prot
  ENSMUST00000218490 UniProtKB/TrEMBL
  ENSMUST00000218744 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.1020 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CCR4-NOT_su2/3/5_N_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Not2/3/5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NOT2/3/5_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72068 UniProtKB/Swiss-Prot
MGD MGI:1919318 ENTREZGENE
NCBI Gene 72068 ENTREZGENE
PANTHER PTHR23326 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam NOT2_3_5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cnot2 PhenoGen
UniGene Mm.351553 ENTREZGENE
UniProt A0A1S6GWJ6 ENTREZGENE, UniProtKB/TrEMBL
  A0A1W2P771_MOUSE UniProtKB/TrEMBL
  CNOT2_MOUSE UniProtKB/Swiss-Prot
  E9Q027 ENTREZGENE, UniProtKB/TrEMBL
  E9Q7M5_MOUSE UniProtKB/TrEMBL
  E9Q8D5_MOUSE UniProtKB/TrEMBL
  E9Q8R6_MOUSE UniProtKB/TrEMBL
  H7BWX6 ENTREZGENE, UniProtKB/TrEMBL
  Q3TIJ0_MOUSE UniProtKB/TrEMBL
  Q5CZY5 ENTREZGENE, UniProtKB/TrEMBL
  Q8C5L3 ENTREZGENE
UniProt Secondary Q3UE39 UniProtKB/Swiss-Prot
  Q80YA5 UniProtKB/Swiss-Prot
  Q9D0P1 UniProtKB/Swiss-Prot