Anxa2 (annexin A2) - Rat Genome Database
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Gene: Anxa2 (annexin A2) Mus musculus
Analyze
Symbol: Anxa2
Name: annexin A2
RGD ID: 731825
MGI Page MGI
Description: Predicted to have several functions, including enzyme binding activity; enzyme inhibitor activity; and phospholipid binding activity. Involved in several processes, including collagen fibril organization; fibrinolysis; and negative regulation of low-density lipoprotein particle receptor catabolic process. Localizes to several cellular components, including Schmidt-Lanterman incisure; basolateral plasma membrane; and myelin sheath adaxonal region. Predicted to colocalize with membrane raft. Is expressed in several structures, including central nervous system; dorsal aorta; oral epithelium; primary palate; and yolk sac blood vessel. Human ortholog(s) of this gene implicated in osteonecrosis. Orthologous to several human genes including ANXA2 (annexin A2); INTERACTS WITH 1,1-dichloroethene; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 33-kDa calcimedin; 33-kDa lymphocyte Ca<2+>- binding protein; 33kDa lymphocyte Ca<2+>- binding protein; 36-kDa calelectrin; annexin II; annexin-2; AW215814; Cal; Cal1h; calpactin I heavy chain; calpactin-1 heavy chain; chromobindin 8; chromobindin-8; lipocortin II; p36; PAP-IV; placental anticoagulant protein IV; protein I
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm17235   Gm17869  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39969,360,965 - 69,399,074 (+)NCBIGRCm39mm39
GRCm39 Ensembl969,360,902 - 69,399,077 (+)Ensembl
GRCm38969,453,683 - 69,491,792 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl969,453,620 - 69,491,795 (+)EnsemblGRCm38mm10GRCm38
MGSCv37969,301,490 - 69,339,592 (+)NCBIGRCm37mm9NCBIm37
MGSCv36969,252,847 - 69,290,949 (+)NCBImm8
Celera966,675,333 - 66,713,431 (+)NCBICelera
Cytogenetic Map9CNCBI
cM Map938.58NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-schisandrin B  (ISO)
(-)-demecolcine  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1,3-dinitrobenzene  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-dimethoxynaphthalene-1,4-dione  (ISO)
2-[cyclohexyl(oxo)methyl]-3,6,7,11b-tetrahydro-1H-pyrazino[2,1-a]isoquinolin-4-one  (ISO)
2-hydroxypropanoic acid  (ISO)
2-nitrofluorene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
9-cis-retinoic acid  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
aniline  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
asbestos  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bleomycin A2  (ISO)
bucladesine  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
carbonyl sulfide  (ISO)
chloroform  (ISO)
chloropicrin  (ISO)
cholesterol  (EXP)
choline  (EXP)
chromium atom  (ISO)
ciprofibrate  (EXP)
cisplatin  (EXP)
clofibrate  (EXP)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
daunorubicin  (ISO)
diarsenic trioxide  (ISO)
dichlorine  (ISO)
dichlorvos  (ISO)
dicrotophos  (ISO)
dihydroartemisinin  (ISO)
dioxygen  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
fenamidone  (EXP)
folic acid  (EXP)
fumonisin B1  (EXP)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glyphosate  (EXP)
griseofulvin  (EXP)
hexadecanoic acid  (ISO)
hyaluronic acid  (ISO)
hydralazine  (ISO)
hydrogen peroxide  (ISO)
ibuprofen  (ISO)
ICI D1694  (ISO)
irinotecan  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
iron(III) nitrilotriacetate  (ISO)
isobutanol  (ISO)
isoflavones  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
lead(2+)  (ISO)
leflunomide  (ISO)
levofloxacin  (ISO)
lipopolysaccharide  (EXP)
lithium atom  (ISO)
lithium hydride  (ISO)
lithocholic acid  (EXP)
mancozeb  (EXP)
medroxyprogesterone acetate  (ISO)
mercury atom  (ISO)
mercury dibromide  (ISO)
mercury(0)  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
microcystin-LR  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
ochratoxin A  (ISO)
oleic acid  (ISO)
ouabain  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
p-toluidine  (ISO)
panobinostat  (ISO)
paracetamol  (EXP)
paraquat  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
pirinixic acid  (EXP)
poly(propylene imine) macromolecule  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (ISO)
quinoline  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rimonabant  (EXP)
rotenone  (EXP,ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
sodium fluoride  (EXP)
Soman  (ISO)
sulfasalazine  (EXP)
tamibarotene  (ISO)
tamoxifen  (EXP)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
thalidomide  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
tributylstannane  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenylstannane  (ISO)
triptonide  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vincristine  (ISO)
vitamin D  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
1. Badea L, etal., Hepatogastroenterology. 2008 Nov-Dec;55(88):2016-27.
2. Baldwin C, etal., Blood. 2005 Jul 1;106(1):372-5. Epub 2005 Mar 22.
3. Chuthapisith S, etal., Eur J Cancer. 2009 May;45(7):1274-81. doi: 10.1016/j.ejca.2008.12.026. Epub 2009 Jan 24.
4. Easterday MC, etal., Dev Biol 2003 Dec 15;264(2):309-22.
5. el Btaouri H, etal., Eur J Biochem. 1996 Dec 15;242(3):506-11.
6. Esposito I, etal., J Pathol. 2006 Apr;208(5):673-85.
7. Ghitescu LD, etal., Diabetes. 2001 Jul;50(7):1666-74.
8. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
9. Kirsch T, etal., Osteoarthritis Cartilage. 2000 Jul;8(4):294-302.
10. Li R, etal., J Immunol. 2015 Oct 15;195(8):3901-11. doi: 10.4049/jimmunol.1500967. Epub 2015 Sep 14.
11. Ling Q, etal., J Clin Invest 2004 Jan;113(1):38-48.
12. Liu N, etal., J Neurosci Res. 2004 Aug 1;77(3):391-401.
13. MGD and Homologene mouse data transfer
14. MGD data from the GO Consortium
15. MGD IEA
16. Moraru II, etal., Ann N Y Acad Sci. 1998 Sep 16;853:329-32.
17. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
18. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
19. Patel SK, etal., Mol Carcinog. 2003 Nov;38(3):141-54.
20. RGD automated import pipeline
21. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
22. RGD automated import pipeline for gene-chemical interactions
23. Rodrigo JP, etal., Hum Pathol. 2011 Jan;42(1):88-94. doi: 10.1016/j.humpath.2010.05.017. Epub 2010 Oct 20.
24. Yonglitthipagon P, etal., Int J Parasitol. 2010 May 19.
Additional References at PubMed
PMID:1676980   PMID:2138915   PMID:2969496   PMID:3013423   PMID:3038891   PMID:7706559   PMID:8602221   PMID:8634333   PMID:8719346   PMID:10036317   PMID:10349636   PMID:10922068  
PMID:11042159   PMID:11076861   PMID:11239426   PMID:12431980   PMID:12477932   PMID:12611902   PMID:12663500   PMID:14506282   PMID:14594209   PMID:14610273   PMID:14726447   PMID:15064349  
PMID:15078881   PMID:15169834   PMID:15251432   PMID:15489334   PMID:15654879   PMID:16141072   PMID:16141073   PMID:16512683   PMID:16602821   PMID:16731532   PMID:16919269   PMID:17360942  
PMID:17549680   PMID:17690254   PMID:18174463   PMID:18289715   PMID:18434302   PMID:18608216   PMID:18799458   PMID:19022301   PMID:19243017   PMID:19536308   PMID:19580511   PMID:19587120  
PMID:19628708   PMID:19841537   PMID:19965653   PMID:20237282   PMID:20405035   PMID:20460368   PMID:20607799   PMID:20817051   PMID:20826156   PMID:20847146   PMID:21108988   PMID:21115493  
PMID:21267068   PMID:21486955   PMID:21518694   PMID:21565611   PMID:21572519   PMID:21677750   PMID:21737841   PMID:21788340   PMID:21873635   PMID:21995826   PMID:22083510   PMID:22159717  
PMID:22185818   PMID:22223826   PMID:22453828   PMID:22517898   PMID:22673621   PMID:22677557   PMID:22848640   PMID:23148505   PMID:23415230   PMID:23525114   PMID:23721211   PMID:23792445  
PMID:24006456   PMID:24014035   PMID:24357721   PMID:24623780   PMID:24742684   PMID:24808179   PMID:24952961   PMID:25053437   PMID:25139998   PMID:25222280   PMID:25355205   PMID:25574848  
PMID:25597631   PMID:26182056   PMID:26243191   PMID:26370502   PMID:26416603   PMID:26438731   PMID:26462467   PMID:26496610   PMID:26527544   PMID:26963384   PMID:27034005   PMID:27045038  
PMID:27371724   PMID:27389701   PMID:27451051   PMID:27470587   PMID:27480124   PMID:28071719   PMID:28130864   PMID:28258160   PMID:28283478   PMID:28334824   PMID:28378742   PMID:28407732  
PMID:28535371   PMID:28536720   PMID:28634551   PMID:28694388   PMID:28706196   PMID:28857429   PMID:29030970   PMID:29217762   PMID:29459677   PMID:29518331   PMID:29786451   PMID:30462534  
PMID:30550785   PMID:30595499   PMID:30760886   PMID:30902828   PMID:31160583   PMID:31253864   PMID:31817350   PMID:32325033   PMID:32687500  


Genomics

Comparative Map Data
Anxa2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39969,360,965 - 69,399,074 (+)NCBIGRCm39mm39
GRCm39 Ensembl969,360,902 - 69,399,077 (+)Ensembl
GRCm38969,453,683 - 69,491,792 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl969,453,620 - 69,491,795 (+)EnsemblGRCm38mm10GRCm38
MGSCv37969,301,490 - 69,339,592 (+)NCBIGRCm37mm9NCBIm37
MGSCv36969,252,847 - 69,290,949 (+)NCBImm8
Celera966,675,333 - 66,713,431 (+)NCBICelera
Cytogenetic Map9CNCBI
cM Map938.58NCBI
ANXA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1560,347,134 - 60,402,883 (-)EnsemblGRCh38hg38GRCh38
GRCh381560,347,151 - 60,398,025 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371560,639,350 - 60,690,185 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361558,426,642 - 58,477,477 (-)NCBINCBI36hg18NCBI36
Build 341558,426,642 - 58,477,477NCBI
Celera1537,527,343 - 37,578,364 (-)NCBI
Cytogenetic Map15q22.2NCBI
HuRef1537,461,790 - 37,512,581 (-)NCBIHuRef
CHM1_11560,757,784 - 60,809,419 (-)NCBICHM1_1
Anxa2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2870,105,268 - 70,141,663 (+)NCBI
Rnor_6.0 Ensembl875,687,100 - 75,723,594 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0875,687,134 - 75,723,589 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0880,014,390 - 80,050,845 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4873,897,618 - 73,934,041 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1873,916,671 - 73,953,094 (+)NCBI
Celera871,583,756 - 71,620,002 (-)NCBICelera
Cytogenetic Map8q24NCBI
Anxa2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545014,512,381 - 14,574,696 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545014,545,586 - 14,574,161 (+)NCBIChiLan1.0ChiLan1.0
ANXA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11557,625,425 - 57,674,250 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1557,625,425 - 57,674,250 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01539,322,303 - 39,371,565 (-)NCBIMhudiblu_PPA_v0panPan3
ANXA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13025,176,845 - 25,210,244 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3025,115,842 - 25,218,281 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3025,157,930 - 25,191,332 (-)NCBI
ROS_Cfam_1.03025,352,698 - 25,398,461 (-)NCBI
UMICH_Zoey_3.13025,281,799 - 25,315,191 (-)NCBI
UNSW_CanFamBas_1.03025,357,572 - 25,390,987 (-)NCBI
UU_Cfam_GSD_1.03025,587,160 - 25,620,802 (-)NCBI
Anxa2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640103,426,049 - 103,466,543 (-)NCBI
SpeTri2.0NW_00493647121,274,112 - 21,329,286 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANXA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1111,588,306 - 111,635,064 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11111,588,721 - 111,635,064 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21123,368,065 - 123,414,406 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANXA2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12623,100,000 - 23,147,687 (+)NCBI
Anxa2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478111,781,893 - 11,820,440 (+)NCBI

Position Markers
AW215814  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38969,491,515 - 69,491,595UniSTSGRCm38
MGSCv37969,339,322 - 69,339,402UniSTSGRCm37
Celera966,713,161 - 66,713,241UniSTS
Cytogenetic Map9CUniSTS
cM Map937.0UniSTS
Whitehead/MRC_RH9674.16UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93406754473531973Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93739490198819654Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93791224471912244Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93819229172192291Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93819229172192291Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93819229172192291Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93949260173492601Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94050829874700643Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94089776474897921Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94357343177573577Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94357343177573577Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94452089278520980Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94892377482923895Mouse
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94892377482923895Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49541121101528921Mouse
14746993Manh66_mmandible shape 66 (mouse)94990676683906766Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95024403884244166Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95212317899910428Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95465267888652678Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95653182690531973Mouse
1301549Bbaa9_mB.burgdorferi-associated arthritis 9 (mouse)Not determined95789776471574472Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95789776486239920Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95911710593117252Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95911710593117252Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95946266493462846Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95946266493462846Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95946266493462846Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96224248596242599Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
11081165Psl6_mpromotion susceptibility QTL 6 (mouse)96513390995640755Mouse
1301290Smgd1_msubmucosal gland distribution 1 (mouse)Not determined96592377486695914Mouse
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966207024100207122Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967124167101124167Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968897510102897652Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968897510102897652Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969239845103239920Mouse
10412174Habiir4_mhyperoxic acute lung injury imprinted region 4 (mouse)Not determined96936046598819654Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:992
Count of miRNA genes:524
Interacting mature miRNAs:604
Transcripts:ENSMUST00000034756, ENSMUST00000123470, ENSMUST00000134907, ENSMUST00000136282, ENSMUST00000143878, ENSMUST00000154591
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_007585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC000399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH001866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D10024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M14044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U34811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000034756   ⟹   ENSMUSP00000034756
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl969,453,620 - 69,491,795 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123470   ⟹   ENSMUSP00000122175
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl969,453,716 - 69,485,257 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134907   ⟹   ENSMUSP00000117979
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl969,454,066 - 69,483,859 (+)Ensembl
RefSeq Acc Id: ENSMUST00000136282   ⟹   ENSMUSP00000117855
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl969,480,111 - 69,491,513 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143878
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl969,478,465 - 69,491,795 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154591
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl969,486,783 - 69,488,108 (+)Ensembl
RefSeq Acc Id: NM_007585   ⟹   NP_031611
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,360,965 - 69,399,067 (+)NCBI
GRCm38969,453,683 - 69,491,785 (+)NCBI
MGSCv37969,301,490 - 69,339,592 (+)RGD
Celera966,675,333 - 66,713,431 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006510796   ⟹   XP_006510859
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39969,361,026 - 69,399,074 (+)NCBI
GRCm38969,453,744 - 69,491,792 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_031611   ⟸   NM_007585
- UniProtKB: P07356 (UniProtKB/Swiss-Prot),   Q542G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510859   ⟸   XM_006510796
- Peptide Label: isoform X1
- UniProtKB: P07356 (UniProtKB/Swiss-Prot),   Q542G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000034756   ⟸   ENSMUST00000034756
RefSeq Acc Id: ENSMUSP00000117979   ⟸   ENSMUST00000134907
RefSeq Acc Id: ENSMUSP00000122175   ⟸   ENSMUST00000123470
RefSeq Acc Id: ENSMUSP00000117855   ⟸   ENSMUST00000136282

Promoters
RGD ID:6844162
Promoter ID:MM_KWN:57948
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000076481,   OTTMUST00000076483,   OTTMUST00000076484
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,301,279 - 69,301,779 (+)MPROMDB
RGD ID:6844166
Promoter ID:MM_KWN:57949
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000076482,   OTTMUST00000076485
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,325,276 - 69,327,502 (+)MPROMDB
RGD ID:6844164
Promoter ID:MM_KWN:57951
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000076486
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,333,751 - 69,335,207 (+)MPROMDB
RGD ID:6848377
Promoter ID:MM_ACW:51097
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B4,   MEF_B6
Transcripts:ANXA2.GSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36969,339,026 - 69,339,526 (+)MPROMDB
RGD ID:8670070
Promoter ID:EPDNEW_M13066
Type:initiation region
Name:Anxa2_1
Description:Mus musculus annexin A2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38969,453,696 - 69,453,756EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88246 AgrOrtholog
Ensembl Genes ENSMUSG00000032231 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000034756 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000117855 UniProtKB/TrEMBL
  ENSMUSP00000117979 UniProtKB/TrEMBL
  ENSMUSP00000122175 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000034756 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000123470 UniProtKB/TrEMBL
  ENSMUST00000134907 UniProtKB/TrEMBL
  ENSMUST00000136282 UniProtKB/TrEMBL
Gene3D-CATH 1.10.220.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Annexin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANX2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12306 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:88246 ENTREZGENE
NCBI Gene 12306 ENTREZGENE
PANTHER PTHR10502:SF18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Annexin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Anxa2 PhenoGen
PRINTS ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXINII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANNEXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANNEXIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ANXA2_MOUSE UniProtKB/Swiss-Prot
  B0V2N5_MOUSE UniProtKB/TrEMBL
  B0V2N7_MOUSE UniProtKB/TrEMBL
  B0V2N8_MOUSE UniProtKB/TrEMBL
  P07356 ENTREZGENE
  Q3UCD3_MOUSE UniProtKB/TrEMBL
  Q542G9 ENTREZGENE, UniProtKB/TrEMBL
  Q99KH3_MOUSE UniProtKB/TrEMBL
  Q9CZI7_MOUSE UniProtKB/TrEMBL