Gid4 (GID complex subunit 4, VID24 homolog) - Rat Genome Database

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Gene: Gid4 (GID complex subunit 4, VID24 homolog) Mus musculus
Analyze
Symbol: Gid4
Name: GID complex subunit 4, VID24 homolog
RGD ID: 1322086
MGI Page MGI
Description: Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of ubiquitin ligase complex. Orthologous to human GID4 (GID complex subunit 4 homolog).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4933439F18Rik; glucose-induced degradation protein 4 homolog; hypothetical protein LOC66771; RP23-135F6.5; uncharacterized protein C17orf39 homolog; vacuolar import and degradation protein 24 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391160,307,971 - 60,336,103 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1160,307,971 - 60,341,753 (+)EnsemblGRCm39 Ensembl
GRCm381160,417,145 - 60,445,277 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1160,417,145 - 60,450,927 (+)EnsemblGRCm38mm10GRCm38
MGSCv371160,230,647 - 60,258,779 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,233,498 - 60,261,472 (+)NCBIMGSCv36mm8
Celera1166,422,835 - 66,451,172 (-)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1137.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16778019   PMID:18799693   PMID:21873635  


Genomics

Comparative Map Data
Gid4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391160,307,971 - 60,336,103 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1160,307,971 - 60,341,753 (+)EnsemblGRCm39 Ensembl
GRCm381160,417,145 - 60,445,277 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1160,417,145 - 60,450,927 (+)EnsemblGRCm38mm10GRCm38
MGSCv371160,230,647 - 60,258,779 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,233,498 - 60,261,472 (+)NCBIMGSCv36mm8
Celera1166,422,835 - 66,451,172 (-)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1137.81NCBI
GID4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381718,039,408 - 18,068,405 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1718,039,408 - 18,068,405 (+)EnsemblGRCh38hg38GRCh38
GRCh371717,942,722 - 17,971,719 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361717,883,336 - 17,912,443 (+)NCBINCBI36Build 36hg18NCBI36
Build 341717,883,335 - 17,912,443NCBI
Celera1718,883,766 - 18,912,866 (+)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1717,696,381 - 17,725,271 (+)NCBIHuRef
CHM1_11717,951,442 - 17,980,554 (+)NCBICHM1_1
T2T-CHM13v2.01717,986,211 - 18,015,201 (+)NCBIT2T-CHM13v2.0
Gid4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81045,721,055 - 45,747,132 (+)NCBIGRCr8
mRatBN7.21045,221,556 - 45,247,627 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1045,221,579 - 45,245,169 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1045,245,754 - 45,247,621 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1049,921,761 - 49,947,809 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01049,412,139 - 49,438,197 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01044,915,742 - 44,941,799 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01046,784,124 - 46,810,517 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1046,783,979 - 46,810,524 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01046,539,451 - 46,565,841 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41046,684,548 - 46,685,415 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1044,478,592 - 44,504,744 (+)NCBICelera
Cytogenetic Map10q22NCBI
Gid4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547811,226,449 - 11,243,935 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547811,223,083 - 11,242,986 (-)NCBIChiLan1.0ChiLan1.0
GID4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21952,555,739 - 52,585,045 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11757,267,982 - 57,297,284 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01733,226,374 - 33,256,146 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GID4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1541,455,823 - 41,477,478 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl541,458,936 - 41,474,358 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha541,595,313 - 41,619,753 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0541,562,631 - 41,587,075 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl541,565,026 - 41,587,075 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1541,530,387 - 41,554,816 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0541,477,802 - 41,502,240 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0541,669,675 - 41,694,110 (-)NCBIUU_Cfam_GSD_1.0
Gid4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560261,231,466 - 61,253,168 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367411,620,359 - 1,635,799 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367411,618,522 - 1,635,776 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GID4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,601,003 - 60,617,454 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,600,993 - 60,617,601 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GID4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11617,079,643 - 17,108,651 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1617,079,800 - 17,105,526 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660593,799,976 - 3,828,905 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gid4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248493,386,101 - 3,408,924 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248493,385,312 - 3,408,842 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gid4
974 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1241
Count of miRNA genes:673
Interacting mature miRNAs:822
Transcripts:ENSMUST00000070681, ENSMUST00000139477
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113776858060402716Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5406567063319522Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115406567067078411Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115408094165103841Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse

Markers in Region
BE105349  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381160,443,075 - 60,443,226UniSTSGRCm38
MGSCv371160,256,577 - 60,256,728UniSTSGRCm37
Celera1166,424,886 - 66,425,037UniSTS
Cytogenetic Map11B2UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_025757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AJ404329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC044901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY716798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ695121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000070681   ⟹   ENSMUSP00000064926
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1160,308,088 - 60,336,103 (+)Ensembl
GRCm38.p6 Ensembl1160,417,262 - 60,445,277 (+)Ensembl
RefSeq Acc Id: ENSMUST00000139477   ⟹   ENSMUSP00000135441
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1160,307,971 - 60,341,753 (+)Ensembl
GRCm38.p6 Ensembl1160,417,145 - 60,450,927 (+)Ensembl
RefSeq Acc Id: NM_025757   ⟹   NP_080033
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391160,307,971 - 60,336,103 (+)NCBI
GRCm381160,417,145 - 60,445,277 (+)ENTREZGENE
MGSCv371160,230,647 - 60,258,779 (+)RGD
Celera1166,422,835 - 66,451,172 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_080033   ⟸   NM_025757
- UniProtKB: Q7TT31 (UniProtKB/Swiss-Prot),   Q3TP79 (UniProtKB/Swiss-Prot),   Q99JE9 (UniProtKB/Swiss-Prot),   Q9CPY6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000135441   ⟸   ENSMUST00000139477
RefSeq Acc Id: ENSMUSP00000064926   ⟸   ENSMUST00000070681

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CPY6-F1-model_v2 AlphaFold Q9CPY6 1-217 view protein structure

Promoters
RGD ID:6821777
Promoter ID:MM_KWN:7704
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_025757,   NM_145427,   OTTMUST00000012888,   OTTMUST00000012911,   OTTMUST00000012912,   OTTMUST00000012913,   OTTMUST00000012914
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361160,229,606 - 60,231,742 (+)MPROMDB
RGD ID:8674876
Promoter ID:EPDNEW_M15469
Type:initiation region
Name:Gid4_1
Description:Mus musculus GID complex subunit 4, VID24 homolog , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381160,417,164 - 60,417,224EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914021 AgrOrtholog
Ensembl Genes ENSMUSG00000018415 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000070681 ENTREZGENE
  ENSMUST00000070681.7 UniProtKB/Swiss-Prot
  ENSMUST00000139477.8 UniProtKB/Swiss-Prot
InterPro Vacuolar_import/degrad_Vid24 UniProtKB/Swiss-Prot
KEGG Report mmu:66771 UniProtKB/Swiss-Prot
MGD MGI:1914021 ENTREZGENE
NCBI Gene 66771 ENTREZGENE
PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 UniProtKB/Swiss-Prot
  VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 UniProtKB/Swiss-Prot
Pfam Vac_ImportDeg UniProtKB/Swiss-Prot
PhenoGen Gid4 PhenoGen
UniProt GID4_MOUSE UniProtKB/Swiss-Prot
  Q3TP79 ENTREZGENE
  Q7TT31 ENTREZGENE
  Q99JE9 ENTREZGENE
  Q9CPY6 ENTREZGENE
UniProt Secondary Q3TP79 UniProtKB/Swiss-Prot
  Q7TT31 UniProtKB/Swiss-Prot
  Q99JE9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-29 Gid4  GID complex subunit 4, VID24 homolog    GID complex subunit 4, VID24 homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED
2012-09-19 Gid4  GID complex subunit 4, VID24 homolog (S. cerevisiae)  4933439F18Rik  RIKEN cDNA 4933439F18 gene  Symbol and/or name change 5135510 APPROVED