Psmc6 (proteasome (prosome, macropain) 26S subunit, ATPase, 6) - Rat Genome Database

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Gene: Psmc6 (proteasome (prosome, macropain) 26S subunit, ATPase, 6) Mus musculus
Analyze
Symbol: Psmc6
Name: proteasome (prosome, macropain) 26S subunit, ATPase, 6
RGD ID: 1318820
MGI Page MGI
Description: Predicted to enable identical protein binding activity and proteasome-activating activity. Predicted to be involved in ERAD pathway; positive regulation of RNA polymerase II transcription preinitiation complex assembly; and positive regulation of inclusion body assembly. Part of proteasome accessory complex. Is expressed in several structures, including brain; genitourinary system; gut; integumental system; and vascular system. Orthologous to human PSMC6 (proteasome 26S subunit, ATPase 6).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2300001E01Rik; 26S protease regulatory subunit 10B; 26S protease regulatory subunit S10B; 26S proteasome AAA-ATPase subunit RPT4; 26S proteasome regulatory subunit 10B; AI451058; MGC151129; proteasome 26S subunit ATPase 6; proteasome subunit p42
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm13260  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,567,285 - 45,587,150 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,567,245 - 45,587,162 (+)EnsemblGRCm39 Ensembl
GRCm381445,329,823 - 45,349,074 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,329,788 - 45,349,705 (+)EnsemblGRCm38mm10GRCm38
MGSCv371445,949,499 - 45,968,746 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361444,251,701 - 44,270,948 (+)NCBIMGSCv36mm8
Celera1441,509,669 - 41,529,121 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.89NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R,R,R)-alpha-tocopherol  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
1H-pyrazole  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-di-tert-butyl-4-methylphenol  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
alpha-pinene  (ISO)
aripiprazole  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
butylated hydroxyanisole  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
Calphostin C  (EXP)
clofibrate  (EXP)
clothianidin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (EXP)
decabromodiphenyl ether  (ISO)
dicrotophos  (ISO)
doxorubicin  (ISO)
elesclomol  (ISO)
ethanol  (EXP)
fenofibrate  (EXP)
finasteride  (ISO)
fipronil  (ISO)
flutamide  (ISO)
folic acid  (EXP)
glafenine  (ISO)
hydralazine  (ISO)
hydrogen peroxide  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
kojic acid  (ISO)
lead diacetate  (EXP)
miconazole  (EXP)
mifepristone  (ISO)
monocrotaline  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
nefazodone  (ISO)
ozone  (ISO)
paracetamol  (ISO)
Pentoxifylline  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
phenytoin  (ISO)
phlorizin  (EXP)
phorbol 13-acetate 12-myristate  (EXP)
pirinixic acid  (EXP)
reactive oxygen species  (EXP)
resveratrol  (ISO)
rotenone  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
Soman  (ISO)
sulindac  (ISO)
temozolomide  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
trichloroethene  (EXP)
tungsten  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15456882   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821  
PMID:16857966   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24194600   PMID:26222436   PMID:27113764   PMID:27325702   PMID:28190767   PMID:28378742   PMID:30457570  
PMID:31040226   PMID:31138677   PMID:31162944   PMID:32017075   PMID:32325033   PMID:36599955  


Genomics

Comparative Map Data
Psmc6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,567,285 - 45,587,150 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,567,245 - 45,587,162 (+)EnsemblGRCm39 Ensembl
GRCm381445,329,823 - 45,349,074 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,329,788 - 45,349,705 (+)EnsemblGRCm38mm10GRCm38
MGSCv371445,949,499 - 45,968,746 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361444,251,701 - 44,270,948 (+)NCBIMGSCv36mm8
Celera1441,509,669 - 41,529,121 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.89NCBI
PSMC6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,707,200 - 52,728,590 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1452,707,178 - 52,728,590 (+)EnsemblGRCh38hg38GRCh38
GRCh371453,173,918 - 53,195,308 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361452,243,668 - 52,264,466 (+)NCBINCBI36Build 36hg18NCBI36
Build 341452,243,667 - 52,264,465NCBI
Celera1433,041,500 - 33,062,289 (+)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1433,334,988 - 33,355,703 (+)NCBIHuRef
CHM1_11453,112,814 - 53,133,601 (+)NCBICHM1_1
T2T-CHM13v2.01446,915,014 - 46,936,383 (+)NCBIT2T-CHM13v2.0
Psmc6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81521,022,314 - 21,043,785 (+)NCBIGRCr8
mRatBN7.21518,542,585 - 18,564,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,542,563 - 18,564,055 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,337,420 - 21,358,885 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,294,373 - 22,315,842 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,550,951 - 20,572,416 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,667,453 - 19,688,916 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,667,453 - 19,688,914 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,631,640 - 23,653,072 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,217,367 - 21,239,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11521,217,379 - 21,238,663 (+)NCBI
Celera1518,970,916 - 18,992,439 (+)NCBICelera
Cytogenetic Map15p14NCBI
Psmc6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,452,615 - 10,475,100 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,454,210 - 10,474,872 (-)NCBIChiLan1.0ChiLan1.0
PSMC6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21553,838,194 - 53,859,022 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11453,054,704 - 53,075,532 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01433,303,689 - 33,324,502 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11451,587,467 - 51,608,044 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,587,467 - 51,608,044 (+)Ensemblpanpan1.1panPan2
LOC100687259
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13235,814,756 - 35,816,311 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha326,196,263 - 6,197,815 (+)NCBIDog10K_Boxer_Tasha
Psmc6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,348,572 - 76,369,833 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366972,121,677 - 2,144,066 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366972,122,727 - 2,143,988 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PSMC6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,328,521 - 182,354,958 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,329,070 - 182,354,959 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,599,698 - 202,625,501 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PSMC6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,784,825 - 29,807,701 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,784,826 - 29,807,490 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605318,060,172 - 18,082,302 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Psmc6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,386,194 - 16,414,485 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,386,194 - 16,414,554 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Psmc6
725 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:131
Count of miRNA genes:102
Interacting mature miRNAs:122
Transcripts:ENSMUST00000022380
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse

Markers in Region
AI451058  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381445,349,377 - 45,349,517UniSTSGRCm38
MGSCv371445,969,052 - 45,969,192UniSTSGRCm37
Celera1441,529,427 - 41,529,567UniSTS
Cytogenetic Map14C1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000022380   ⟹   ENSMUSP00000022380
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,567,245 - 45,587,162 (+)Ensembl
GRCm38.p6 Ensembl1445,329,788 - 45,349,705 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226431
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,567,304 - 45,574,977 (+)Ensembl
GRCm38.p6 Ensembl1445,329,847 - 45,337,520 (+)Ensembl
RefSeq Acc Id: ENSMUST00000226739
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,577,911 - 45,584,254 (+)Ensembl
GRCm38.p6 Ensembl1445,340,454 - 45,346,797 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,567,293 - 45,578,124 (+)Ensembl
GRCm38.p6 Ensembl1445,329,836 - 45,340,667 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227385
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,572,087 - 45,578,224 (+)Ensembl
GRCm38.p6 Ensembl1445,334,630 - 45,340,767 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,567,302 - 45,578,308 (+)Ensembl
GRCm38.p6 Ensembl1445,329,845 - 45,340,851 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228300   ⟹   ENSMUSP00000153960
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,567,285 - 45,572,137 (+)Ensembl
GRCm38.p6 Ensembl1445,329,828 - 45,334,680 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228479   ⟹   ENSMUSP00000153924
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,567,318 - 45,578,308 (+)Ensembl
GRCm38.p6 Ensembl1445,329,861 - 45,340,851 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228831
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,568,212 - 45,578,348 (+)Ensembl
GRCm38.p6 Ensembl1445,330,755 - 45,340,891 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228870
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1445,571,864 - 45,575,229 (+)Ensembl
GRCm38.p6 Ensembl1445,334,407 - 45,337,772 (+)Ensembl
RefSeq Acc Id: NM_001416015   ⟹   NP_001402944
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391445,567,285 - 45,587,150 (+)NCBI
RefSeq Acc Id: NM_025959   ⟹   NP_080235
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391445,567,285 - 45,587,150 (+)NCBI
GRCm381445,329,824 - 45,349,071 (+)ENTREZGENE
MGSCv371445,949,499 - 45,968,746 (+)RGD
Celera1441,509,669 - 41,529,121 (+)RGD
cM Map14 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_080235   ⟸   NM_025959
- Peptide Label: isoform 1
- UniProtKB: Q810A6 (UniProtKB/Swiss-Prot),   Q3TKK1 (UniProtKB/Swiss-Prot),   Q9CXH9 (UniProtKB/Swiss-Prot),   P62334 (UniProtKB/Swiss-Prot),   Q14AQ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000153960   ⟸   ENSMUST00000228300
RefSeq Acc Id: ENSMUSP00000022380   ⟸   ENSMUST00000022380
RefSeq Acc Id: ENSMUSP00000153924   ⟸   ENSMUST00000228479
RefSeq Acc Id: NP_001402944   ⟸   NM_001416015
- Peptide Label: isoform 2
- UniProtKB: Q8QZS9 (UniProtKB/TrEMBL)
Protein Domains
AAA+ ATPase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62334-F1-model_v2 AlphaFold P62334 1-389 view protein structure

Promoters
RGD ID:8682032
Promoter ID:EPDNEW_M19047
Type:initiation region
Name:Psmc6_1
Description:Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase,6 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381445,329,828 - 45,329,888EPDNEW
RGD ID:6825302
Promoter ID:MM_KWN:16418
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000022380
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361445,948,786 - 45,949,702 (+)MPROMDB
RGD ID:6848643
Promoter ID:MM_TRO:3076
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:MTR002991.14.929.3
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361445,949,781 - 45,950,281 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914339 AgrOrtholog
Ensembl Genes ENSMUSG00000021832 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000022380 ENTREZGENE
  ENSMUST00000022380.9 UniProtKB/Swiss-Prot
  ENSMUST00000228300.2 UniProtKB/TrEMBL
  ENSMUST00000228479.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.8.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.40.50.140 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AAA_lid_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATPase_AAA_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATPase_AAA_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NA-bd_OB-fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_ATP_ID_OB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67089 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1914339 ENTREZGENE
NCBI Gene 67089 ENTREZGENE
PANTHER 26S PROTEASOME REGULATORY SUBUNIT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  26S PROTEASOME REGULATORY SUBUNIT 10B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AAA_lid_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_ATP_ID_OB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Psmc6 PhenoGen
PROSITE AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2I3BQ49_MOUSE UniProtKB/TrEMBL
  A0A2I3BQ79_MOUSE UniProtKB/TrEMBL
  P62334 ENTREZGENE, UniProtKB/Swiss-Prot
  Q14AQ1 ENTREZGENE, UniProtKB/TrEMBL
  Q3TKK1 ENTREZGENE
  Q810A6 ENTREZGENE
  Q8QZS9 ENTREZGENE, UniProtKB/TrEMBL
  Q9CXH9 ENTREZGENE
UniProt Secondary P49719 UniProtKB/Swiss-Prot
  Q3TKK1 UniProtKB/Swiss-Prot
  Q810A6 UniProtKB/Swiss-Prot
  Q92524 UniProtKB/Swiss-Prot
  Q9CXH9 UniProtKB/Swiss-Prot