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ONTOLOGY REPORT - ANNOTATIONS


Term:aminoglycan catabolic process
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Accession:GO:0006026 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
Synonyms:exact_synonym: aminoglycan breakdown;   aminoglycan catabolism;   aminoglycan degradation


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chia chitinase, acidic JBrowse link 2 208,750,348 208,797,388 RGD:1600115
RGD:1624291
chitin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chi3l1 chitinase 3 like 1 JBrowse link 13 51,022,844 51,030,797 RGD:13792537
G Chi3l3 chitinase 3-like 3 JBrowse link 2 208,899,871 208,936,858 RGD:13792537
G Chia chitinase, acidic JBrowse link 2 208,750,348 208,797,388 RGD:5000759
RGD:13792537
RGD:1624291
RGD:1600115
G Chit1 chitinase 1 JBrowse link 13 50,947,020 50,994,644 RGD:1624291
RGD:13792537
G Ctbs chitobiase JBrowse link 2 252,305,874 252,320,387 RGD:2301430
RGD:13792537
G RGD1309110 similar to Hypothetical protein MGC58999 JBrowse link 2 208,982,251 209,004,270 RGD:13792537
chondroitin sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hyal4 hyaluronidase 4 JBrowse link 4 52,147,641 52,166,276 RGD:1624291
dermatan sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idua alpha-L-iduronidase JBrowse link 14 2,041,828 2,056,762 RGD:1624291
glycosaminoglycan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07030903.1 RGD:13792537
G Hyal2 hyaluronidase 2 JBrowse link 8 116,324,062 116,328,978 RGD:1624291
RGD:1600115
G Hyal4 hyaluronidase 4 JBrowse link 4 52,147,641 52,166,276 RGD:1331360
G Ids iduronate 2-sulfatase JBrowse link 8 69,447,971 69,466,708 RGD:1624291
G Idua alpha-L-iduronidase JBrowse link 14 2,041,828 2,056,762 RGD:1599427
RGD:1624291
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 JBrowse link 1 175,663,266 175,676,699 RGD:1624291
G Sgsh N-sulfoglucosamine sulfohydrolase JBrowse link 10 108,469,312 108,479,094 RGD:1624291
heparin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idua alpha-L-iduronidase JBrowse link 14 2,041,828 2,056,762 RGD:1624291
hyaluronan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:1600115
RGD:1624291
G Cemip cell migration inducing hyaluronidase JBrowse link 1 146,069,774 146,226,320 RGD:1624291
RGD:1600115
G Cemip2 cell migration inducing hyaluronidase 2 JBrowse link 1 239,397,322 239,474,931 RGD:1624291
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:1624291
G Hyal1 hyaluronidase 1 JBrowse link 8 116,332,834 116,337,522 RGD:1600115
RGD:1624291
G Hyal2 hyaluronidase 2 JBrowse link 8 116,324,062 116,328,978 RGD:8553259
RGD:1624291
RGD:1600115
G Hyal3 hyaluronidase 3 JBrowse link 8 116,336,512 116,342,147 RGD:1600115
RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
keratan sulfate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gns glucosamine (N-acetyl)-6-sulfatase JBrowse link 7 63,467,027 63,501,054 RGD:1600571
peptidoglycan catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07067422.1 RGD:1600115
G LOC100910070 lysozyme g-like protein 1-like JBrowse link 9 44,605,306 44,611,810 RGD:1600115
G LOC103693222 lysozyme g-like protein 2 JBrowse link 9 44,574,626 44,590,028 RGD:1600115
G Lyg1 lysozyme G1 JBrowse link 9 44,527,596 44,539,320 RGD:1600115
G Lyg2 lysozyme G2 JBrowse link 9 44,497,508 44,509,921 RGD:1600115
G Pglyrp1 peptidoglycan recognition protein 1 JBrowse link 1 79,790,879 79,796,064 RGD:1600115
G Pglyrp2 peptidoglycan recognition protein 2 JBrowse link 7 14,426,481 14,435,987 RGD:1600115
G Pglyrp3 peptidoglycan recognition protein 3 JBrowse link 2 191,903,626 192,264,872 RGD:1600115
G Pglyrp3b peptidoglycan recognition protein 3b JBrowse link 2 191,900,147 191,916,863 RGD:1600115
G Pglyrp4 peptidoglycan recognition protein 4 JBrowse link 2 190,125,655 190,204,230 RGD:1600115

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  biological_process 19678
    metabolic process 11954
      organic substance metabolic process 11359
        macromolecule metabolic process 9815
          aminoglycan metabolic process 111
            aminoglycan catabolic process 31
              chitin catabolic process + 6
              glycosaminoglycan catabolic process + 25
              poly-N-acetyllactosamine catabolic process 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.