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ONTOLOGY REPORT - ANNOTATIONS


Term:aminoglycan catabolic process
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Accession:GO:0006026 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
Synonyms:exact_synonym: aminoglycan breakdown;   aminoglycan catabolism;   aminoglycan degradation


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chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:45,641,802...45,649,787 JBrowse link
G Chi3l3 chitinase 3-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:193,808,141...193,825,511 JBrowse link
G Chia chitinase, acidic involved_in IDA
IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:1931335|PMID:11085997)
PMID:21873635
(PMID:19435888)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11085997 PMID:19435888, PMID:11085997, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1931335, RGD:5000759, RGD:13792537 NCBI chr 2:193,614,374...193,656,532 JBrowse link
G Chit1 chitinase 1 involved_in ISO
IBA
(PMID:19725875)
PMID:21873635
RGD PMID:19725875, PMID:21873635 RGD:13792537 NCBI chr13:45,565,841...45,613,593 JBrowse link
G Ctbs chitobiase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:2751306, PMID:21873635 RGD:2301430, RGD:13792537 NCBI chr 2:235,340,520...235,355,091 JBrowse link
G RGD1309110 similar to Hypothetical protein MGC58999 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:193,858,038...193,879,133 JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal4 hyaluronidase 4 acts_upstream_of_or_within ISO (MGI:5490850|PMID:23086929) RGD PMID:23086929 MGI:5490850 NCBI chr 4:53,256,179...53,274,819 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
MGI:2176236|MGI:4415188 (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987)
RGD PMID:19751987 PMID:19834056 PMID:24036510 MGI:4397742 MGI:4414887 NCBI chr14:1,031,588...1,059,494 JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030903.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Hyal2 hyaluronidase 2 involved_in ISO
ISS
(PMID:9712871)
GO_REF:0000024
RGD
UniProt
PMID:9712871 GO_REF:0000024 NCBI chr 8:108,241,895...108,246,853 JBrowse link
G Hyal4 hyaluronidase 4 TAS RGD PMID:10989127 RGD:1331360 NCBI chr 4:53,256,179...53,274,819 JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO (PMID:28593992) RGD PMID:28593992 NCBI chr  X:149,025,977...149,046,639 JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within IDA
ISO
MGI:2176236|MGI:2651471|MGI:4415188 (MGI:3697540|PMID:16979922), (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987), (MGI:5295514|PMID:21873421), (MGI:5448924|PMID:22580166) RGD PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 PMID:22580166, PMID:6138357 MGI:3697540 MGI:4397742 MGI:4414887 MGI:5295514 MGI:5448924, RGD:1599427 NCBI chr14:1,031,588...1,059,494 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 acts_upstream_of_or_within ISO (MGI:2135409|PMID:11278811) RGD PMID:11278811 MGI:2135409 NCBI chr 1:164,962,872...164,976,309 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO (PMID:15146460), (PMID:7493035) RGD PMID:7493035 PMID:15146460 NCBI chr10:104,596,810...104,613,510 JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236|MGI:4415188 (MGI:4397742|PMID:19834056), (MGI:4414887|PMID:19751987), (MGI:5295514|PMID:21873421)
(PMID:21873421)
RGD PMID:19751987 PMID:19834056 PMID:21873421 MGI:4397742 MGI:4414887 MGI:5295514 NCBI chr14:1,031,588...1,059,494 JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (Indian blood group) involved_in IEA
ISO
GO_REF:0000107
(PMID:17170110)
Ensembl
RGD
PMID:17170110 GO_REF:0000107 NCBI chr 3:89,155,850...89,244,615 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5545862|PMID:24251095)
(PMID:23509262)
UniProt
RGD
PMID:23509262 PMID:24251095 GO_REF:0000024 MGI:5545862 NCBI chr 1:137,906,921...138,062,430 JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in ISO (PMID:28246172) RGD PMID:28246172 NCBI chr 1:219,330,295...219,407,760 JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 2:120,236,328...120,290,673 JBrowse link
G Hyal1 hyaluronidase 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11296287), (PMID:17170110), (PMID:20473947), (PMID:21695196), (PMID:21699545), (PMID:21829529)
(PMID:12084718)
Ensembl
RGD
PMID:11296287 PMID:12084718 PMID:17170110 PMID:20473947 PMID:21695196 PMID:21699545 PMID:21829529, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:108,250,654...108,254,526 JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
IEA
IBA
ISO
PMID:19635555
GO_REF:0000107
PMID:21873635
(PMID:17170110), (PMID:19443707), (PMID:20554532), (PMID:21699545)
Ensembl
RGD
PMID:17170110 PMID:19443707 PMID:20554532 PMID:21699545, PMID:19635555, PMID:21873635 GO_REF:0000107, RGD:8553259, RGD:13792537 NCBI chr 8:108,241,895...108,246,853 JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:4834982|PMID:20586096)
PMID:21873635
GO_REF:0000107
(PMID:21699545)
(PMID:12084718)
UniProt
RGD
Ensembl
PMID:12084718 PMID:20586096 PMID:21699545, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4834982, RGD:13792537 NCBI chr 8:108,254,385...108,260,020 JBrowse link
G Hyal4 hyaluronidase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,256,179...53,274,819 JBrowse link
G Hyal5 hyaluronoglucosaminidase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,341,105...53,412,280 JBrowse link
G Hyal6 hyaluronoglucosaminidase 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,238,118...53,250,783 JBrowse link
G Spam1 sperm adhesion molecule 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,302,745...53,312,913 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:17324121)
GO_REF:0000024
RGD
UniProt
PMID:17324121 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848 JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase IDA RGD PMID:3161730 RGD:1600571 NCBI chr 7:56,889,139...56,923,170 JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067422.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Lyg1 lysozyme G1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:40,171,123...40,182,869 JBrowse link
G Lyg2 lysozyme G2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:40,141,144...40,150,821 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:78,531,815...78,537,001 JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:11,418,674...11,432,162 JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:177,479,693...177,490,867 JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:176,202,654...176,322,859 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      organic substance metabolic process 11334
        macromolecule metabolic process 9790
          aminoglycan metabolic process 111
            aminoglycan catabolic process 31
              chitin catabolic process + 6
              glycosaminoglycan catabolic process + 25
              poly-N-acetyllactosamine catabolic process 0
paths to the root