Arih2 (ariadne RBR E3 ubiquitin protein ligase 2) - Rat Genome Database
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Gene: Arih2 (ariadne RBR E3 ubiquitin protein ligase 2) Mus musculus
Analyze
Symbol: Arih2
Name: ariadne RBR E3 ubiquitin protein ligase 2
RGD ID: 1314114
MGI Page MGI
Description: Predicted to have ubiquitin conjugating enzyme binding activity and ubiquitin protein ligase activity. Involved in ubiquitin-dependent protein catabolic process. Predicted to colocalize with Cul5-RING ubiquitin ligase complex. Orthologous to human ARIH2 (ariadne RBR E3 ubiquitin protein ligase 2); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4'-tetrachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI843547; ARI-2; ARI2; ariadne 2; ariadne homolog 2; E3 ubiquitin-protein ligase ARIH2; protein ariadne-2 homolog; RING-type E3 ubiquitin transferase ARIH2; TRI; TRIAD1; ubcM4-interacting protein 48; UIP48
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm12263  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,480,141 - 108,531,917 (-)NCBIGRCm39mm39
GRCm389108,602,942 - 108,653,681 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,602,942 - 108,649,386 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,505,273 - 108,551,711 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,460,279 - 108,506,785 (-)NCBImm8
Celera9108,214,330 - 108,260,897 (-)NCBICelera
Cytogenetic Map9F2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10422847   PMID:10431818   PMID:10880484   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11722579   PMID:12477932   PMID:12520002   PMID:12904583  
PMID:14610273   PMID:15489334   PMID:15782199   PMID:16118314   PMID:16141072   PMID:16141073   PMID:18799693   PMID:19256485   PMID:21454682   PMID:21873635   PMID:22819825   PMID:23179078  
PMID:24486325   PMID:25895533  


Genomics

Comparative Map Data
Arih2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,480,141 - 108,531,917 (-)NCBIGRCm39mm39
GRCm389108,602,942 - 108,653,681 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,602,942 - 108,649,386 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,505,273 - 108,551,711 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,460,279 - 108,506,785 (-)NCBImm8
Celera9108,214,330 - 108,260,897 (-)NCBICelera
Cytogenetic Map9F2NCBI
ARIH2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl348,918,821 - 48,986,382 (+)EnsemblGRCh38hg38GRCh38
GRCh38348,918,821 - 48,986,382 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37348,956,275 - 49,023,815 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37348,956,265 - 49,022,974 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36348,931,285 - 48,997,978 (+)NCBINCBI36hg18NCBI36
Build 34348,935,201 - 48,997,973NCBI
Celera348,912,042 - 48,977,617 (+)NCBI
Cytogenetic Map3p21.31NCBI
HuRef349,014,398 - 49,080,892 (+)NCBIHuRef
CHM1_1348,908,366 - 48,975,548 (+)NCBICHM1_1
Arih2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,296,738 - 109,355,909 (-)NCBI
Rnor_6.0 Ensembl8117,387,010 - 117,446,019 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08117,387,004 - 117,446,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08116,731,507 - 116,790,857 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,647,000 - 113,705,922 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18113,667,741 - 113,725,377 (-)NCBI
Celera8108,592,510 - 108,651,513 (-)NCBICelera
Cytogenetic Map8q32NCBI
Arih2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955532933,749 - 1,008,619 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955532933,749 - 1,008,619 (+)NCBIChiLan1.0ChiLan1.0
ARIH2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1349,926,429 - 49,991,929 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl349,926,453 - 49,991,924 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0348,844,161 - 48,910,183 (+)NCBIMhudiblu_PPA_v0panPan3
ARIH2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2040,179,168 - 40,230,880 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12040,178,560 - 40,230,870 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Arih2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936529648,661 - 713,616 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARIH2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,570,088 - 31,625,226 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,570,026 - 31,623,833 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,821,469 - 34,873,436 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103227609
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,319,039 - 10,398,244 (+)NCBI
ChlSab1.1 Ensembl2210,328,154 - 10,385,184 (+)Ensembl
Arih2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247302,953,649 - 3,023,716 (+)NCBI

Position Markers
RH127724  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,603,102 - 108,603,305UniSTSGRCm38
MGSCv379108,505,433 - 108,505,636UniSTSGRCm37
Celera9108,214,490 - 108,214,693UniSTS
Cytogenetic Map9F2UniSTS
D9Mit116  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,641,085 - 108,641,214UniSTSGRCm38
MGSCv379108,543,416 - 108,543,545UniSTSGRCm37
Celera9108,252,602 - 108,252,731UniSTS
Cytogenetic Map9F2UniSTS
cM Map961.0UniSTS
Whitehead Genetic960.1UniSTS
D9Mit212  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,641,084 - 108,641,186UniSTSGRCm38
MGSCv379108,543,415 - 108,543,517UniSTSGRCm37
Celera9108,252,601 - 108,252,703UniSTS
Cytogenetic Map9F2UniSTS
cM Map961.0UniSTS
Whitehead Genetic960.1UniSTS
D9Dcr112  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,623,129 - 108,623,234UniSTSGRCm38
MGSCv379108,525,460 - 108,525,565UniSTSGRCm37
Celera9108,234,662 - 108,234,787UniSTS
Cytogenetic Map9F2UniSTS
cM Map9 UniSTS
D9Dcr113  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,641,087 - 108,641,194UniSTSGRCm38
MGSCv379108,543,418 - 108,543,525UniSTSGRCm37
Celera9108,252,604 - 108,252,711UniSTS
Cytogenetic Map9F2UniSTS
cM Map9 UniSTS
AJ130975  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,604,836 - 108,604,968UniSTSGRCm38
GRCm381159,474,038 - 59,474,170UniSTSGRCm38
MGSCv379108,507,167 - 108,507,299UniSTSGRCm37
MGSCv371159,287,540 - 59,287,672UniSTSGRCm37
Celera9108,216,224 - 108,216,356UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map9F2UniSTS
Whitehead/MRC_RH91110.84UniSTS
AI843547  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389108,603,265 - 108,603,355UniSTSGRCm38
MGSCv379108,505,596 - 108,505,686UniSTSGRCm37
Celera9108,214,653 - 108,214,743UniSTS
Cytogenetic Map9F2UniSTS
Whitehead/MRC_RH91112.65UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:877
Count of miRNA genes:497
Interacting mature miRNAs:595
Transcripts:ENSMUST00000013338
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001357283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_151664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC173341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF124664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ130975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT571271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000013338   ⟹   ENSMUSP00000013338
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,602,942 - 108,649,380 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192686
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,604,943 - 108,607,355 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192853
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,605,274 - 108,607,958 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193190   ⟹   ENSMUSP00000141914
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,604,686 - 108,649,385 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193197   ⟹   ENSMUSP00000141911
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,609,896 - 108,649,386 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193552   ⟹   ENSMUSP00000142102
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,609,980 - 108,644,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193643   ⟹   ENSMUSP00000141369
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,616,785 - 108,649,342 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193923
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,602,947 - 108,606,610 (-)Ensembl
RefSeq Acc Id: ENSMUST00000194073   ⟹   ENSMUSP00000141364
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,604,808 - 108,608,683 (-)Ensembl
RefSeq Acc Id: ENSMUST00000194290
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,615,768 - 108,649,318 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195623
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,644,701 - 108,649,369 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195741
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9108,614,768 - 108,630,144 (-)Ensembl
RefSeq Acc Id: NM_001357283   ⟹   NP_001344212
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,526,607 (-)NCBI
GRCm389108,602,942 - 108,649,408 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357285   ⟹   NP_001344214
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,530,880 (-)NCBI
GRCm389108,602,942 - 108,653,681 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357286   ⟹   NP_001344215
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,526,607 (-)NCBI
GRCm389108,602,942 - 108,649,408 (-)NCBI
Sequence:
RefSeq Acc Id: NM_011790   ⟹   NP_035920
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,526,607 (-)NCBI
GRCm389108,602,942 - 108,649,408 (-)NCBI
MGSCv379108,505,273 - 108,551,711 (-)RGD
Celera9108,214,330 - 108,260,897 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_151664
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,526,607 (-)NCBI
GRCm389108,602,942 - 108,649,408 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242881   ⟹   XP_011241183
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,487,153 - 108,531,917 (-)NCBI
GRCm389108,609,954 - 108,649,410 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244351   ⟹   XP_030100211
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,523,290 (-)NCBI
GRCm389108,602,942 - 108,646,100 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244352   ⟹   XP_030100212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,525,795 (-)NCBI
GRCm389108,602,942 - 108,648,596 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244353   ⟹   XP_030100213
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,526,610 (-)NCBI
GRCm389108,602,942 - 108,649,410 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154928   ⟹   XP_036010821
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,480,141 - 108,523,286 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_035920   ⟸   NM_011790
- Peptide Label: isoform a
- UniProtKB: Q9Z1K6 (UniProtKB/Swiss-Prot),   Q3TK92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011241183   ⟸   XM_011242881
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001344214   ⟸   NM_001357285
- Peptide Label: isoform a
RefSeq Acc Id: XP_030100213   ⟸   XM_030244353
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001344212   ⟸   NM_001357283
- Peptide Label: isoform a
RefSeq Acc Id: NP_001344215   ⟸   NM_001357286
- Peptide Label: isoform b precursor
RefSeq Acc Id: XP_030100212   ⟸   XM_030244352
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100211   ⟸   XM_030244351
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000013338   ⟸   ENSMUST00000013338
RefSeq Acc Id: ENSMUSP00000141364   ⟸   ENSMUST00000194073
RefSeq Acc Id: ENSMUSP00000142102   ⟸   ENSMUST00000193552
RefSeq Acc Id: ENSMUSP00000141369   ⟸   ENSMUST00000193643
RefSeq Acc Id: ENSMUSP00000141911   ⟸   ENSMUST00000193197
RefSeq Acc Id: ENSMUSP00000141914   ⟸   ENSMUST00000193190
RefSeq Acc Id: XP_036010821   ⟸   XM_036154928
- Peptide Label: isoform X2
Protein Domains
RING-type

Promoters
RGD ID:6844182
Promoter ID:MM_KWN:58818
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Lung
Transcripts:NM_011790,   UC009RQP.1,   UC009RQR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369108,551,399 - 108,551,899 (-)MPROMDB
RGD ID:6844206
Promoter ID:MM_KWN:58819
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:AK010698_2410049M19RIK,   ENSMUST00000116704,   UC009RQQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369108,555,931 - 108,557,372 (-)MPROMDB
RGD ID:8670922
Promoter ID:EPDNEW_M13492
Type:initiation region
Name:Arih2_1
Description:Mus musculus ariadne RBR E3 ubiquitin protein ligase 2 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389108,649,397 - 108,649,457EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1344361 AgrOrtholog
Ensembl Genes ENSMUSG00000064145 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000013338 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000141364 UniProtKB/TrEMBL
  ENSMUSP00000141369 UniProtKB/TrEMBL
  ENSMUSP00000141911 UniProtKB/TrEMBL
  ENSMUSP00000141914 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000142102 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000013338 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000193190 UniProtKB/TrEMBL
  ENSMUST00000193197 UniProtKB/TrEMBL
  ENSMUST00000193552 UniProtKB/TrEMBL
  ENSMUST00000193643 UniProtKB/TrEMBL
  ENSMUST00000194073 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ariadne-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  E3_UB_ligase_RBR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IBR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRIAD_supradom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:23807 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1344361 ENTREZGENE
NCBI Gene 23807 ENTREZGENE
PANTHER PTHR11685 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11685:SF210 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam IBR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arih2 PhenoGen
PROSITE TRIAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_RING_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_RING_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IBR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A6YW24_MOUSE UniProtKB/TrEMBL
  A0A0A6YW29_MOUSE UniProtKB/TrEMBL
  A0A0A6YXA7_MOUSE UniProtKB/TrEMBL
  A0A0A6YXB0_MOUSE UniProtKB/TrEMBL
  A0A0A6YXR5_MOUSE UniProtKB/TrEMBL
  ARI2_MOUSE UniProtKB/Swiss-Prot
  Q3TK92 ENTREZGENE, UniProtKB/TrEMBL
  Q9Z1K6 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-22 Arih2  ariadne RBR E3 ubiquitin protein ligase 2    ariadne homolog 2 (Drosophila)  Symbol and/or name change 5135510 APPROVED