Ezr (ezrin) - Rat Genome Database

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Gene: Ezr (ezrin) Mus musculus
Analyze
Symbol: Ezr
Name: ezrin
RGD ID: 732447
MGI Page MGI
Description: Enables disordered domain specific binding activity. Involved in several processes, including actin cytoskeleton organization; intestinal D-glucose absorption; and positive regulation of protein localization to plasma membrane. Acts upstream of or within establishment or maintenance of apical/basal cell polarity and receptor internalization. Located in several cellular components, including brush border; microvillus; and uropod. Is expressed in several structures, including alimentary system; brain; early conceptus; genitourinary system; and sensory organ. Orthologous to human EZR (ezrin).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW146364; cyt; cytovillin; ez; MGC107499; p8; p81; R75297; V; Vil2; villin 2; villin-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm17832   Gm5739  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39177,005,530 - 7,050,179 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl177,005,440 - 7,050,183 (-)EnsemblGRCm39 Ensembl
GRCm38176,738,131 - 6,782,780 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl176,738,041 - 6,782,784 (-)EnsemblGRCm38mm10GRCm38
MGSCv37176,942,480 - 6,987,129 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36176,587,789 - 6,632,438 (-)NCBIMGSCv36mm8
Celera1514,687,905 - 14,732,667 (+)NCBICelera
Cytogenetic Map17A1NCBI
cM Map174.38NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(S)-amphetamine  (EXP)
(S)-nicotine  (EXP,ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1,8-cineole  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP,ISO)
2-naphthylamine  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
ampicillin  (ISO)
aniline  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
atropine  (ISO)
benzalkonium chloride  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bicalutamide  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (ISO)
cadmium atom  (ISO)
caffeine  (EXP,ISO)
cannabidiol  (ISO)
carbon monoxide  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
choline  (EXP)
chromium(6+)  (ISO)
cisplatin  (EXP,ISO)
clofibric acid  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
cyclohexanols  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
D-glucose  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (EXP,ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP,ISO)
fipronil  (ISO)
flavonoids  (ISO)
folic acid  (EXP)
fructose  (ISO)
furan  (ISO)
genistein  (EXP)
gentamycin  (ISO)
glucose  (EXP)
haloperidol  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
inulin  (EXP)
isobutanol  (ISO)
isoflavones  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
lead nitrate  (EXP)
lead(0)  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
lithium atom  (ISO)
lithium hydride  (ISO)
menadione  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
metronidazole  (ISO)
microcystin-LR  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
naphthalene  (EXP)
neomycin  (ISO)
nicotine  (EXP,ISO)
nitric oxide  (ISO)
nitrogen dioxide  (ISO)
ochratoxin A  (ISO)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
parathion  (ISO)
PCB138  (ISO)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
Propiverine  (ISO)
rotenone  (ISO)
SB 203580  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium dodecyl sulfate  (ISO)
sodium fluoride  (EXP)
sodium hydroxide  (ISO)
Soman  (ISO)
starch  (ISO)
T-2 toxin  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
tributylstannane  (EXP)
Tributyltin oxide  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
Triton X-100  (ISO)
tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate  (ISO)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
withaferin A  (ISO)
Withanone  (ISO)
Y-27632  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
actin cytoskeleton organization  (ISO)
actin filament bundle assembly  (ISO,ISS)
astral microtubule organization  (IEA,ISO)
cellular response to cAMP  (IEA,ISO)
cortical microtubule organization  (IEA,ISO)
epithelial cell differentiation  (ISO)
establishment of centrosome localization  (IEA,ISO)
establishment of endothelial barrier  (IEA,ISO)
establishment of epithelial cell apical/basal polarity  (ISO)
establishment or maintenance of apical/basal cell polarity  (IMP)
filopodium assembly  (IEA,ISO)
gland morphogenesis  (ISO)
intestinal D-glucose absorption  (IGI)
leukocyte cell-cell adhesion  (IEA)
membrane to membrane docking  (IEA)
microvillus assembly  (IGI,ISO)
negative regulation of ERK1 and ERK2 cascade  (IEA,ISO)
negative regulation of interleukin-2 production  (IEA,ISO)
negative regulation of p38MAPK cascade  (IEA,ISO)
negative regulation of T cell receptor signaling pathway  (IEA,ISO)
negative regulation of transcription by RNA polymerase II  (IEA,ISO)
positive regulation of early endosome to late endosome transport  (IBA,IEA,ISO)
positive regulation of gene expression  (IEA,ISO)
positive regulation of multicellular organism growth  (IGI)
positive regulation of protein catabolic process  (IEA,ISO)
positive regulation of protein localization to early endosome  (IBA,IEA,ISO)
positive regulation of protein localization to plasma membrane  (IGI)
postsynaptic actin cytoskeleton organization  (IDA,IMP)
protein kinase A signaling  (IEA,ISO)
protein localization to cell cortex  (IEA,ISO)
protein localization to plasma membrane  (IEA,ISO)
protein-containing complex localization  (IEA,ISO)
receptor internalization  (IMP)
regulation of actin cytoskeleton organization  (ISO)
regulation of cell shape  (IBA,IEA,ISO)
regulation of cell size  (ISO)
regulation of microvillus length  (IGI)
regulation of non-canonical NF-kappaB signal transduction  (ISO)
regulation of organelle assembly  (IBA,IEA,ISO)
sphingosine-1-phosphate receptor signaling pathway  (IEA,ISO)
terminal web assembly  (IGI)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. ERM-dependent movement of CD43 defines a novel protein complex distal to the immunological synapse. Allenspach EJ, etal., Immunity 2001 Nov;15(5):739-50.
2. Normal development of mice and unimpaired cell adhesion/cell motility/actin-based cytoskeleton without compensatory up-regulation of ezrin or radixin in moesin gene knockout. Doi Y, etal., J Biol Chem 1999 Jan 22;274(4):2315-21.
3. The ezrin-like family of tyrosine kinase substrates: receptor-specific pattern of tyrosine phosphorylation and relationship to malignant transformation. Fazioli F, etal., Oncogene 1993 May;8(5):1335-45.
4. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
5. Sensitivity of CYP1A1 mRNA inducibility by dioxin is the same in Cyp1a2(+/+) wild-type and Cyp1a2(-/-) null mutant mice. Liang HC, etal., Biochem Pharmacol 1997 Nov 15;54(10):1127-31.
6. The parathyroid hormone receptorsome and the potential for therapeutic intervention. Mahon MJ Curr Drug Targets. 2012 Jan;13(1):116-28.
7. MGDs mouse GO annotations MGD data from the GO Consortium
8. MGD IEA MGD IEA
9. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
10. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
11. Mouse MP Annotation Import Pipeline RGD automated import pipeline
12. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
13. Localized effects of cAMP mediated by distinct routes of protein kinase A. Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.
Additional References at PubMed
PMID:1429901   PMID:1955455   PMID:7671812   PMID:7983158   PMID:9365271   PMID:9472040   PMID:10349636   PMID:10806479   PMID:10885754   PMID:10922068   PMID:11042159   PMID:11076861  
PMID:11180962   PMID:11544199   PMID:12068294   PMID:12360288   PMID:12477932   PMID:12520002   PMID:12840161   PMID:12904583   PMID:14610273   PMID:14613898   PMID:14625387   PMID:14681479  
PMID:14704789   PMID:14704791   PMID:14996907   PMID:15177033   PMID:15196952   PMID:15465499   PMID:15489334   PMID:15647482   PMID:15782199   PMID:15797715   PMID:15809309   PMID:15987432  
PMID:16141072   PMID:16141073   PMID:16274688   PMID:16289046   PMID:16365167   PMID:16510507   PMID:16648854   PMID:16996217   PMID:17079275   PMID:17122142   PMID:17138661   PMID:17507402  
PMID:17535745   PMID:17634366   PMID:17967808   PMID:17977945   PMID:17995939   PMID:18177851   PMID:18182570   PMID:18261459   PMID:18321067   PMID:18544931   PMID:18567601   PMID:18579745  
PMID:18670435   PMID:18799693   PMID:19060919   PMID:19064715   PMID:19084535   PMID:19124745   PMID:19170756   PMID:19255442   PMID:19321616   PMID:19348776   PMID:19461485   PMID:19737422  
PMID:19857202   PMID:20171124   PMID:20335315   PMID:20551175   PMID:20660156   PMID:20706633   PMID:20806059   PMID:21098570   PMID:21267068   PMID:21289089   PMID:21339367   PMID:21343695  
PMID:21377456   PMID:21451358   PMID:21659656   PMID:21666723   PMID:21677750   PMID:21712385   PMID:21730140   PMID:21745462   PMID:21873635   PMID:21880782   PMID:21965329   PMID:22072575  
PMID:22100262   PMID:22114352   PMID:22132106   PMID:22147261   PMID:22398208   PMID:22479204   PMID:22891241   PMID:22895514   PMID:23017497   PMID:23019340   PMID:23063725   PMID:23229862  
PMID:23249734   PMID:23284756   PMID:23313818   PMID:23338238   PMID:23341629   PMID:23405179   PMID:23468835   PMID:23555292   PMID:23684747   PMID:23707896   PMID:24043783   PMID:24043890  
PMID:24135232   PMID:24154525   PMID:24164893   PMID:24284068   PMID:24285636   PMID:24297905   PMID:24385580   PMID:24457600   PMID:24599031   PMID:24662291   PMID:24726496   PMID:24923387  
PMID:25144196   PMID:25144766   PMID:25311759   PMID:25572402   PMID:25588837   PMID:25636444   PMID:25715395   PMID:26033091   PMID:26062936   PMID:26067252   PMID:26184908   PMID:26201991  
PMID:26329936   PMID:26405179   PMID:26442671   PMID:26483553   PMID:26490995   PMID:26496610   PMID:26606857   PMID:26631503   PMID:26657766   PMID:26673134   PMID:26924049   PMID:27008858  
PMID:27019864   PMID:27068110   PMID:27217206   PMID:27542690   PMID:27568519   PMID:27616714   PMID:27641493   PMID:27870829   PMID:27914826   PMID:28190767   PMID:28302370   PMID:28340616  
PMID:28362853   PMID:28378742   PMID:28402857   PMID:28608644   PMID:28671696   PMID:28821013   PMID:28883468   PMID:29158444   PMID:29361573   PMID:29540766   PMID:29720403   PMID:29906485  
PMID:30021765   PMID:30196744   PMID:30385740   PMID:30562487   PMID:30651295   PMID:30973865   PMID:31040226   PMID:31068622   PMID:31562139   PMID:31940751   PMID:32155439   PMID:32179912  
PMID:32236127   PMID:32325033   PMID:32554809   PMID:33046507   PMID:33137126   PMID:33601422   PMID:33795534   PMID:33993983   PMID:34099675   PMID:34163435   PMID:34168324   PMID:34255829  
PMID:34267243   PMID:34321999   PMID:34588579   PMID:35065713   PMID:35173550   PMID:36293380   PMID:36580262   PMID:36796536   PMID:36989113   PMID:37190767   PMID:37442135   PMID:37467022  
PMID:37522872   PMID:38355793   PMID:38822427   PMID:39018199  


Genomics

Comparative Map Data
Ezr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39177,005,530 - 7,050,179 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl177,005,440 - 7,050,183 (-)EnsemblGRCm39 Ensembl
GRCm38176,738,131 - 6,782,780 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl176,738,041 - 6,782,784 (-)EnsemblGRCm38mm10GRCm38
MGSCv37176,942,480 - 6,987,129 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36176,587,789 - 6,632,438 (-)NCBIMGSCv36mm8
Celera1514,687,905 - 14,732,667 (+)NCBICelera
Cytogenetic Map17A1NCBI
cM Map174.38NCBI
EZR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386158,765,748 - 158,819,368 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6158,765,741 - 158,819,368 (-)EnsemblGRCh38hg38GRCh38
GRCh376159,186,780 - 159,240,400 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366159,106,764 - 159,159,247 (-)NCBINCBI36Build 36hg18NCBI36
Build 346159,157,186 - 159,209,668NCBI
Celera6159,834,789 - 159,888,323 (-)NCBICelera
Cytogenetic Map6q25.3NCBI
HuRef6156,657,307 - 156,711,123 (-)NCBIHuRef
CHM1_16159,449,491 - 159,503,058 (-)NCBICHM1_1
T2T-CHM13v2.06160,010,984 - 160,064,812 (-)NCBIT2T-CHM13v2.0
Ezr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8149,373,033 - 49,416,573 (-)NCBIGRCr8
mRatBN7.2146,967,961 - 47,011,505 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl146,967,658 - 47,011,505 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx147,516,906 - 47,560,444 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0153,504,177 - 53,547,825 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0147,592,352 - 47,635,890 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0147,287,872 - 47,331,412 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl147,287,874 - 47,331,412 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0148,590,971 - 48,634,511 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4141,178,195 - 41,221,735 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1141,181,139 - 41,224,680 (-)NCBI
Celera142,655,531 - 42,699,079 (-)NCBICelera
Cytogenetic Map1q11NCBI
Ezr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554393,703,013 - 3,740,345 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554393,701,722 - 3,740,345 (+)NCBIChiLan1.0ChiLan1.0
EZR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25178,869,668 - 178,923,683 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16176,774,286 - 176,828,291 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06156,656,146 - 156,709,986 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16161,670,483 - 161,723,102 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6161,670,483 - 161,723,102 (-)Ensemblpanpan1.1panPan2
EZR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1148,160,206 - 48,210,036 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl148,160,206 - 48,210,036 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha149,005,197 - 49,055,099 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0148,346,325 - 48,397,738 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl148,346,327 - 48,397,690 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1148,223,100 - 48,272,944 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0148,093,979 - 48,143,792 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0148,653,395 - 48,703,265 (-)NCBIUU_Cfam_GSD_1.0
Ezr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946143,161,383 - 143,205,800 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648910,412,710 - 10,458,201 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648910,413,374 - 10,457,771 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EZR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl18,403,453 - 8,452,742 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.118,403,362 - 8,452,750 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2110,423,530 - 10,432,162 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EZR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11386,342,954 - 86,399,827 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1386,344,051 - 86,370,622 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604058,721,321 - 58,778,578 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ezr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624929826,531 - 873,572 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624929827,275 - 873,743 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ezr
404 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1132
Count of miRNA genes:585
Interacting mature miRNAs:692
Transcripts:ENSMUST00000064234, ENSMUST00000131131
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse

Markers in Region
AW146364  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,738,978 - 6,739,079UniSTSGRCm38
MGSCv37176,943,327 - 6,943,428UniSTSGRCm37
Celera1514,731,719 - 14,731,820UniSTS
Cytogenetic Map17A1UniSTS
Whitehead/MRC_RH17112.02UniSTS
X60671  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,738,808 - 6,738,998UniSTSGRCm38
MGSCv37176,943,157 - 6,943,347UniSTSGRCm37
Celera1514,731,800 - 14,731,990UniSTS
Cytogenetic Map17A1UniSTS
Whitehead_YAC15 UniSTS
D15Mit19  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,762,584 - 6,762,702UniSTSGRCm38
MGSCv37176,966,933 - 6,967,051UniSTSGRCm37
Celera1514,708,102 - 14,708,220UniSTS
Cytogenetic Map17A1UniSTS
cM Map1515.6UniSTS
cM Map17 UniSTS
Whitehead Genetic1510.9UniSTS
Whitehead_YAC15 UniSTS
RH125205  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,741,505 - 6,742,486UniSTSGRCm38
MGSCv37176,945,854 - 6,946,835UniSTSGRCm37
Celera1514,728,310 - 14,729,291UniSTS
Cytogenetic Map17A1UniSTS
Vil2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,738,485 - 6,739,226UniSTSGRCm38
MGSCv37176,942,834 - 6,943,575UniSTSGRCm37
Celera1514,731,572 - 14,732,313UniSTS
Cytogenetic Map17A1UniSTS
cM Map17 UniSTS
cM MapUN UniSTS
cM Map17 UniSTS
UniSTS:237563  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,739,014 - 6,739,227UniSTSGRCm38
MGSCv37176,943,363 - 6,943,576UniSTSGRCm37
Celera1514,731,571 - 14,731,784UniSTS
Cytogenetic Map17A1UniSTS
D18S492  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381946,595,716 - 46,596,641UniSTSGRCm38
GRCm38176,752,049 - 6,752,403UniSTSGRCm38
MGSCv371946,670,206 - 46,671,131UniSTSGRCm37
MGSCv37176,956,398 - 6,956,752UniSTSGRCm37
Cytogenetic Map17A1UniSTS
Cytogenetic Map19D1UniSTS
Vil2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,753,840 - 6,754,067UniSTSGRCm38
MGSCv37176,958,189 - 6,958,416UniSTSGRCm37
Celera1514,716,730 - 14,716,957UniSTS
Cytogenetic Map17A1UniSTS
Vil2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17A1UniSTS
cM MapUN UniSTS
cM Map17 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_009510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC168090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC098502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X60671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000064234   ⟹   ENSMUSP00000063734
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl177,005,440 - 7,050,183 (-)Ensembl
GRCm38.p6 Ensembl176,738,041 - 6,782,784 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131131
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl177,008,236 - 7,010,220 (-)Ensembl
GRCm38.p6 Ensembl176,740,837 - 6,742,821 (-)Ensembl
RefSeq Acc Id: NM_009510   ⟹   NP_033536
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39177,005,530 - 7,050,179 (-)NCBI
GRCm38176,738,131 - 6,782,780 (-)ENTREZGENE
MGSCv37176,942,480 - 6,987,129 (-)RGD
Celera1514,687,905 - 14,732,667 (+)NCBI
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_033536   ⟸   NM_009510
- UniProtKB: Q80ZT8 (UniProtKB/Swiss-Prot),   Q9DCI1 (UniProtKB/Swiss-Prot),   P26040 (UniProtKB/Swiss-Prot),   Q3UL48 (UniProtKB/TrEMBL),   Q4KML7 (UniProtKB/TrEMBL),   Q3TCP5 (UniProtKB/TrEMBL),   Q3UXR4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000063734   ⟸   ENSMUST00000064234
Protein Domains
FERM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P26040-F1-model_v2 AlphaFold P26040 1-586 view protein structure

Promoters
RGD ID:13674668
Promoter ID:EPDNEW_M21483
Type:initiation region
Name:Ezr_1
Description:Mus musculus ezrin , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38176,782,755 - 6,782,815EPDNEW
RGD ID:6828082
Promoter ID:MM_KWN:22018
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung,   Spleen
Transcripts:OTTMUST00000044006
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36176,946,741 - 6,947,692 (-)MPROMDB
RGD ID:6828083
Promoter ID:MM_KWN:22019
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:ENSMUST00000097429
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36176,963,906 - 6,964,406 (-)MPROMDB
RGD ID:6828081
Promoter ID:MM_KWN:22020
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000064234
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36176,987,021 - 6,987,542 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:98931 AgrOrtholog
Ensembl Genes ENSMUSG00000052397 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000064234 ENTREZGENE
  ENSMUST00000064234.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.80.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.360.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERM_C_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERM_FERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERM_helical UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ez/rad/moesin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_central UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Moesin_tail_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:98931 ENTREZGENE
NCBI Gene 22350 ENTREZGENE
PANTHER EZRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23281 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERM_helical UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_M UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ezr PhenoGen
PIRSF ERM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS BAND41 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ERMFAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FERM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART B41 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47031 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48678 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt EZRI_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TCP5 ENTREZGENE, UniProtKB/TrEMBL
  Q3UL48 ENTREZGENE, UniProtKB/TrEMBL
  Q3UXR4 ENTREZGENE, UniProtKB/TrEMBL
  Q4KML7 ENTREZGENE, UniProtKB/TrEMBL
  Q80ZT8 ENTREZGENE
  Q8CBU4_MOUSE UniProtKB/TrEMBL
  Q9DCI1 ENTREZGENE
UniProt Secondary Q80ZT8 UniProtKB/Swiss-Prot
  Q9DCI1 UniProtKB/Swiss-Prot