Fbxo43 (F-box protein 43) - Rat Genome Database

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Gene: Fbxo43 (F-box protein 43) Mus musculus
Analyze
Symbol: Fbxo43
Name: F-box protein 43
RGD ID: 1553428
MGI Page MGI
Description: Predicted to enable zinc ion binding activity. Acts upstream of or within negative regulation of meiotic nuclear division and negative regulation of protein catabolic process. Located in female germ cell nucleus. Is expressed in early conceptus and gonad. Human ortholog(s) of this gene implicated in spermatogenic failure 64. Orthologous to human FBXO43 (F-box protein 43).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930533G20Rik; early mitotic inhibitor 2; Emi; Emi2; endogenous meiotic inhibitor 2; F-box only protein 43; MGC107440; XErp1 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391536,150,206 - 36,170,086 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1536,150,206 - 36,165,030 (-)EnsemblGRCm39 Ensembl
GRCm381536,150,060 - 36,169,940 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1536,150,060 - 36,164,884 (-)EnsemblGRCm38mm10GRCm38
MGSCv371536,079,815 - 36,094,639 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361536,094,649 - 36,109,473 (-)NCBIMGSCv36mm8
Celera1536,777,573 - 36,792,407 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1514.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Systematic analysis and nomenclature of mammalian F-box proteins. Jin J, etal., Genes Dev 2004 Nov 1;18(21):2573-80.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16456547   PMID:16966421   PMID:18550795  
PMID:18799693   PMID:20724447   PMID:21267068   PMID:21677750   PMID:21873635   PMID:21924255   PMID:22302686   PMID:24920040   PMID:25161877   PMID:26991553   PMID:28723571   PMID:30850578  
PMID:32232159   PMID:34052850   PMID:38310234  


Genomics

Comparative Map Data
Fbxo43
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391536,150,206 - 36,170,086 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1536,150,206 - 36,165,030 (-)EnsemblGRCm39 Ensembl
GRCm381536,150,060 - 36,169,940 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1536,150,060 - 36,164,884 (-)EnsemblGRCm38mm10GRCm38
MGSCv371536,079,815 - 36,094,639 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361536,094,649 - 36,109,473 (-)NCBIMGSCv36mm8
Celera1536,777,573 - 36,792,407 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1514.46NCBI
FBXO43
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388100,133,351 - 100,150,569 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8100,133,351 - 100,145,817 (-)EnsemblGRCh38hg38GRCh38
GRCh378101,145,579 - 101,158,045 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368101,214,835 - 101,227,252 (-)NCBINCBI36Build 36hg18NCBI36
Celera897,330,985 - 97,343,496 (-)NCBICelera
Cytogenetic Map8q22.2NCBI
HuRef896,348,421 - 96,360,932 (-)NCBIHuRef
CHM1_18101,185,882 - 101,198,393 (-)NCBICHM1_1
T2T-CHM13v2.08101,258,131 - 101,275,344 (-)NCBIT2T-CHM13v2.0
Fbxo43
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8769,218,298 - 69,231,873 (-)NCBIGRCr8
mRatBN7.2767,333,161 - 67,346,751 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl767,333,162 - 67,346,751 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx769,221,626 - 69,235,193 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0771,424,242 - 71,437,811 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0771,292,102 - 71,305,672 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0774,925,091 - 74,938,796 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl774,925,092 - 74,938,663 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0775,081,329 - 75,094,991 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4771,670,329 - 71,683,901 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1771,691,059 - 71,704,631 (-)NCBI
Celera764,414,991 - 64,428,564 (-)NCBICelera
Cytogenetic Map7q22NCBI
Fbxo43
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541715,390,969 - 15,406,751 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541715,394,481 - 15,406,751 (-)NCBIChiLan1.0ChiLan1.0
FBXO43
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27117,474,806 - 117,498,887 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1893,013,613 - 93,037,589 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0896,774,246 - 96,786,933 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1898,948,145 - 98,960,382 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl898,948,145 - 98,960,382 (-)Ensemblpanpan1.1panPan2
FBXO43
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1132,037,270 - 2,057,465 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl132,038,408 - 2,052,741 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha132,035,158 - 2,054,848 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0132,189,300 - 2,210,531 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl132,191,213 - 2,203,034 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1132,033,543 - 2,054,732 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0132,145,577 - 2,166,765 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0132,148,055 - 2,167,777 (-)NCBIUU_Cfam_GSD_1.0
Fbxo43
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530335,662,044 - 35,674,874 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647043,088,714 - 43,100,973 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647043,091,516 - 43,100,973 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBXO43
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl436,856,937 - 36,871,618 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1436,856,662 - 36,872,753 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2439,772,435 - 39,787,507 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FBXO43
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1894,983,189 - 94,996,480 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl894,983,640 - 94,994,672 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603945,685,902 - 45,699,132 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Fbxo43
580 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:529
Count of miRNA genes:323
Interacting mature miRNAs:386
Transcripts:ENSMUST00000058643
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11252136Modvl4_mmodifier of vacuolated lens (mouse)15562049439620614Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
1302165Yv_myellow value (mouse)Not determined151384700647847148Mouse
12904003Opfaq12_mopen field activity QTL 12 (mouse)153435891138447901Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
1301406Egrd2_mearly growth rate (mouse)Not determined152631178060311880Mouse
1301020Pheo_mpheomelanin (mouse)Not determined151384700647847148Mouse
4141358Ath22_matherosclerosis 22 (mouse)Not determined346465237464652Mouse
10412172Habiir5_mhyperoxic acute lung injury imprinted region 5 (mouse)Not determined15927302243311880Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
1301760Dob9_mdietary obesity 9 (mouse)Body fat amountadiposity index152603568037781301Mouse
27226759Feml17_mfemur length 17, 10 week (mouse)15762948155263396Mouse
27095940Ulnl8_mulna length 8, 10 week (mouse)15722948155263396Mouse
27226755Feml22_mfemur length 22, 16 week (mouse)15762948159271849Mouse
26884409Bzwq16_mbi-zygomatic width QTL 16, 16 week (mouse)15612948138000244Mouse
26884412Bzwq10_mbi-zygomatic width QTL 10, 10 week (mouse)15612948171471849Mouse
1301557Bbaa22_mB.burgdorferi-associated arthritis 22 (mouse)Not determined152446257258462805Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1301951Eila3_methanol induced locomotor activity 3 (mouse)Not determined151492758748927756Mouse
27226800Scvln20_msacral vertebrae length 2, 16 week (mouse)152660008666371849Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
4141192Ssrq2_mstress response QTL 2 (mouse)Not determined927302256186850Mouse
1300772Bglq16_mbody growth late QTL 16 (mouse)Not determined152631178060311880Mouse
26884387Skwq8_mskull length QTL 8, 10 week (mouse)15612948168271849Mouse
26884384Skwq12_mskull length QTL 12, 16 week (mouse)15612948150763396Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
26884439Sklq11_mskull length QTL 11, 10 week (mouse)15812948447663396Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
4141423Nstr2_mnerve sheath tumor resistance QTL 2 (mouse)Not determined1492758748927756Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
26884429Zlq6_mzygomatic length QTL 6, 10 week (mouse)15682948144963396Mouse
1301450Bpq6_mblood pressure QTL 6 (mouse)Not determined152828264662282739Mouse
14928313Manh78_mmandible shape 78 (mouse)152148464155484641Mouse
26884417Bzwq4_mbi-zygomatic width QTL 4, 5 week (mouse)15612948172471849Mouse
12859288Criq1_mCitrobacter rodentium infection QTL 1 (mouse)151603395450033954Mouse
1357512Bsbob5_mBSB obesity 5 (mouse)Not determined152828264662282739Mouse
26884423Zlq10_mzygomatic length QTL 10, 16 week (mouse)152060008650763396Mouse
12859289Criq3_mCitrobacter rodentium infection QTL 3 (mouse)152259376556593765Mouse
4141409Radsvq1_mradiation sensitivity QTL 1 (mouse)Not determined2548497859484978Mouse
1357514Mbis3_mMycobacterium bovis-induced systemic lupus erythematosus 3 (mouse)Not determined162631178060311880Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
1301324Cdif_mcolor difference (mouse)Not determined153597590669976019Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1302007Bbaa14_mB.burgdorferi-associated arthritis 14 (mouse)Not determined151492758748927756Mouse
1301499Bdln2_mbody length 2 (mouse)Not determined151564534349645470Mouse
27095922Pglq11_mpelvic girdle length QTL 11, 10 week (mouse)15812948438763395Mouse
4142160Femwf10_mfemur work to failure 10 (mouse)Not determined2289301456893160Mouse
10401902Sicd2_mseizure-induced cell death 2 (mouse)Not determined15347438971197538Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
1300578Cd8ts3_mCD8 T cell subset 3 (mouse)Not determined153400469468004804Mouse
1301345Bgeq14_mbody growth early QTL 14 (mouse)Not determined152631178060311880Mouse
1300967Bdt6_mbone density traits 6 (mouse)Not determined152529580659295928Mouse
4140994Shali3_msurvival time to hyperoxic acute lung injury 3 (mouse)Not determined927302243311880Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
26884452Sklq17_mskull length QTL 17, 16 week (mouse)153020014657963396Mouse

Markers in Region
Fbxo43  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15B3.1UniSTS
cM Map15 UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000058643   ⟹   ENSMUSP00000054125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1536,150,206 - 36,165,030 (-)Ensembl
GRCm38.p6 Ensembl1536,150,060 - 36,164,884 (-)Ensembl
Ensembl Acc Id: ENSMUST00000227781
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1536,163,227 - 36,164,963 (-)Ensembl
GRCm38.p6 Ensembl1536,163,081 - 36,164,817 (-)Ensembl
Ensembl Acc Id: ENSMUST00000227793   ⟹   ENSMUSP00000154351
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1536,162,718 - 36,164,963 (-)Ensembl
GRCm38.p6 Ensembl1536,162,572 - 36,164,817 (-)Ensembl
RefSeq Acc Id: NM_001081253   ⟹   NP_001074722
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391536,150,206 - 36,165,007 (-)NCBI
GRCm381536,150,060 - 36,164,861 (-)NCBI
MGSCv371536,079,815 - 36,094,639 (-)RGD
Celera1536,777,573 - 36,792,407 (-)RGD
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001368658   ⟹   NP_001355587
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391536,150,206 - 36,165,007 (-)NCBI
GRCm381536,150,060 - 36,164,861 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006520197   ⟹   XP_006520260
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391536,150,206 - 36,165,597 (-)NCBI
GRCm381536,150,060 - 36,165,451 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006520198   ⟹   XP_006520261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391536,152,272 - 36,165,597 (-)NCBI
GRCm381536,152,126 - 36,165,451 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245385   ⟹   XP_011243687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391536,150,206 - 36,164,765 (-)NCBI
GRCm381536,150,060 - 36,164,619 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017316803   ⟹   XP_017172292
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391536,150,206 - 36,170,086 (-)NCBI
GRCm381536,150,060 - 36,169,940 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001074722   ⟸   NM_001081253
- Peptide Label: isoform 2
- UniProtKB: Q8R0R1 (UniProtKB/Swiss-Prot),   Q8CDI2 (UniProtKB/Swiss-Prot),   Q4G0C8 (UniProtKB/Swiss-Prot),   G3X9B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006520260   ⟸   XM_006520197
- Peptide Label: isoform X1
- UniProtKB: Q8R0R1 (UniProtKB/Swiss-Prot),   Q8CDI2 (UniProtKB/Swiss-Prot),   Q4G0C8 (UniProtKB/Swiss-Prot),   G3X9B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006520261   ⟸   XM_006520198
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011243687   ⟸   XM_011245385
- Peptide Label: isoform X1
- UniProtKB: Q8R0R1 (UniProtKB/Swiss-Prot),   Q8CDI2 (UniProtKB/Swiss-Prot),   Q4G0C8 (UniProtKB/Swiss-Prot),   G3X9B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017172292   ⟸   XM_017316803
- Peptide Label: isoform X1
- UniProtKB: Q8R0R1 (UniProtKB/Swiss-Prot),   Q8CDI2 (UniProtKB/Swiss-Prot),   Q4G0C8 (UniProtKB/Swiss-Prot),   G3X9B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001355587   ⟸   NM_001368658
- Peptide Label: isoform 1
- UniProtKB: Q8R0R1 (UniProtKB/Swiss-Prot),   Q8CDI2 (UniProtKB/Swiss-Prot),   Q4G0C8 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000154351   ⟸   ENSMUST00000227793
Ensembl Acc Id: ENSMUSP00000054125   ⟸   ENSMUST00000058643
Protein Domains
F-box   ZBR-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8CDI2-F1-model_v2 AlphaFold Q8CDI2 1-640 view protein structure

Promoters
RGD ID:6826016
Promoter ID:MM_KWN:18256
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:AK006948_1700074I03RIK,   NM_001081253
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361536,094,641 - 36,095,141 (-)MPROMDB
RGD ID:8683582
Promoter ID:EPDNEW_M19822
Type:initiation region
Name:Fbxo43_1
Description:Mus musculus F-box protein 43 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381536,164,846 - 36,164,906EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926053 AgrOrtholog
Ensembl Genes ENSMUSG00000048230 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000058643 ENTREZGENE
Gene3D-CATH 1.20.1280.50 UniProtKB/Swiss-Prot
  2.20.25.20 UniProtKB/Swiss-Prot
InterPro FBX5_43 UniProtKB/Swiss-Prot
  IBR_dom UniProtKB/Swiss-Prot
  ZF_ZBR UniProtKB/Swiss-Prot
MGD MGI:1926053 ENTREZGENE
NCBI Gene 78803 ENTREZGENE
PANTHER F-BOX ONLY PROTEIN 43 UniProtKB/Swiss-Prot
  F-BOX ONLY PROTEIN 5 AND 43 UniProtKB/Swiss-Prot
PhenoGen Fbxo43 PhenoGen
PROSITE ZF_ZBR UniProtKB/Swiss-Prot
SMART IBR UniProtKB/Swiss-Prot
Superfamily-SCOP RING/U-box UniProtKB/Swiss-Prot
UniProt A0A2I3BQX6_MOUSE UniProtKB/TrEMBL
  FBX43_MOUSE UniProtKB/Swiss-Prot
  G3X9B2 ENTREZGENE, UniProtKB/TrEMBL
  Q4G0C8 ENTREZGENE
  Q8CDI2 ENTREZGENE
  Q8R0R1 ENTREZGENE
UniProt Secondary Q4G0C8 UniProtKB/Swiss-Prot
  Q8R0R1 UniProtKB/Swiss-Prot