Fmn2 (formin 2) - Rat Genome Database

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Gene: Fmn2 (formin 2) Mus musculus
Analyze
Symbol: Fmn2
Name: formin 2
RGD ID: 1316778
MGI Page MGI
Description: Predicted to enable actin binding activity. Involved in several processes, including cytoskeleton organization; meiotic nuclear division; and oogenesis. Acts upstream of or within actin filament bundle assembly and meiotic chromosome movement towards spindle pole. Located in several cellular components, including endoplasmic reticulum membrane; microvillus; and spindle. Is expressed in several structures, including brain; ganglia; neural ectoderm; otocyst; and testis. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 47. Orthologous to human FMN2 (formin 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU024104; formin-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391174,324,079 - 174,650,295 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1174,329,391 - 174,650,295 (+)EnsemblGRCm39 Ensembl
GRCm381174,501,752 - 174,822,729 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1174,501,825 - 174,822,729 (+)EnsemblGRCm38mm10GRCm38
MGSCv371176,431,956 - 176,752,860 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361176,325,847 - 176,658,752 (+)NCBIMGSCv36mm8
Celera1181,581,367 - 181,911,120 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map181.04NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouseautosomal recessive intellectual developmental disorder 47  ISOFMN2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
Fmn2Mousegastrointestinal stromal tumor  ISOFMN2 (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
Fmn2Mousegenetic disease  ISOFMN2 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
Fmn2MouseHereditary Leiomyomatosis and Renal Cell Cancer  ISOFMN2 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary leiomyomatosis and renal cell cancerClinVarPMID:29909963
Fmn2MouseHirschsprung's disease  ISOFMN2 (Homo sapiens)8554872ClinVar Annotator: match by term: Aganglionic megacolonClinVar 
Fmn2Mouseintellectual disability  ISOFMN2 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25741868
Fmn2MouseNeurodevelopmental Disorders  ISOFMN2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
Fmn2Mouseparathyroid carcinoma  ISOFMN2 (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouserenal cell carcinoma  ISOFMN2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22138691
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouseautosomal recessive intellectual developmental disorder 47  ISOFMN2 (Homo sapiens)7240710 OMIM 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of FMN2 mRNACTDPMID:17942748
Fmn2Mouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of FMN2 mRNACTDPMID:39298647
Fmn2Mouse2,2',5,5'-tetrachlorobiphenyl decreases expressionISOFMN2 (Homo sapiens)64804642 more ...CTDPMID:36804509
Fmn2Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of FMN2 mRNACTDPMID:17942748
Fmn2Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of FMN2 mRNACTDPMID:21570461 more ...
Fmn2Mouse2,4-dibromophenyl 2,4,5-tribromophenyl ether increases expressionISOFMN2 (Homo sapiens)64804642 more ...CTDPMID:26705709
Fmn2Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of FMN2 mRNACTDPMID:39298647
Fmn2Mouse5-aza-2'-deoxycytidine multiple interactionsISOFMN2 (Homo sapiens)6480464Decitabine inhibits the reaction [Smoke results in decreased expression of FMN2 mRNA]CTDPMID:21095227
Fmn2Mouseaflatoxin B1 decreases methylationISOFMN2 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of FMN2 exon and Aflatoxin B1 results in decreased methylation of FMN2 geneCTDPMID:27153756 and PMID:30157460
Fmn2Mouseall-trans-retinoic acid increases expressionISOFMN2 (Homo sapiens)6480464Tretinoin results in increased expression of FMN2 mRNACTDPMID:23724009
Fmn2Mousearsane affects methylationISOFMN2 (Homo sapiens)6480464Arsenic affects the methylation of FMN2 geneCTDPMID:25304211
Fmn2Mousearsenic atom affects methylationISOFMN2 (Homo sapiens)6480464Arsenic affects the methylation of FMN2 geneCTDPMID:25304211
Fmn2Mousearsenite(3-) multiple interactionsISOFMN2 (Homo sapiens)6480464arsenite inhibits the reaction [G3BP1 protein binds to FMN2 mRNA]CTDPMID:32406909
Fmn2Mousearsenous acid increases expressionISOFMN2 (Homo sapiens)6480464Arsenic Trioxide results in increased expression of FMN2 mRNACTDPMID:20458559
Fmn2Mousebenzo[a]pyrene increases methylationISOFMN2 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of FMN2 5' UTR and Benzo(a)pyrene results in increased methylation of FMN2 exonCTDPMID:27901495
Fmn2Mousebenzo[a]pyrene affects methylationISOFMN2 (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of FMN2 exon more ...CTDPMID:27901495 and PMID:30157460
Fmn2Mousebenzo[b]fluoranthene increases expressionEXP 6480464benzo(b)fluoranthene results in increased expression of FMN2 mRNACTDPMID:26377693
Fmn2Mousebenzo[e]pyrene decreases methylationISOFMN2 (Homo sapiens)6480464benzo(e)pyrene results in decreased methylation of FMN2 intronCTDPMID:30157460
Fmn2Mousebis(2-ethylhexyl) phthalate decreases expressionISOFMN2 (Homo sapiens)6480464Diethylhexyl Phthalate results in decreased expression of FMN2 mRNACTDPMID:31163220
Fmn2Mousebisphenol A decreases expressionISOFmn2 (Rattus norvegicus)6480464bisphenol A results in decreased expression of FMN2 mRNACTDPMID:25181051

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Biological Process
1 to 20 of 28 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouseactin cytoskeleton organization involved_inIBAPANTHER:PTN004399475 more ...2290270 GO_CentralGO_REF:0000033
Fmn2Mouseactin cytoskeleton organization involved_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mouseactin filament bundle assembly acts_upstream_of_or_withinIMP 2290270 PMID:23439682MGIPMID:23439682
Fmn2Mouseactin nucleation involved_inIEAInterPro:IPR0012652290270 InterProGO_REF:0000002
Fmn2Mousecell migration involved_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mousecell migration involved_inIEAUniProtKB:Q9NZ56 and ensembl:ENSP000003188842290270 EnsemblGO_REF:0000107
Fmn2Mousecellular response to hypoxia involved_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mousecellular response to hypoxia involved_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2MouseDNA damage response involved_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2MouseDNA damage response involved_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mouseestablishment of meiotic spindle localization involved_inIMP 2290270 PMID:12447394 and PMID:21620703UniProtPMID:12447394 and PMID:21620703
Fmn2Mouseformin-nucleated actin cable assembly involved_inIBAPANTHER:PTN002660381 more ...2290270 GO_CentralGO_REF:0000033
Fmn2Mouseformin-nucleated actin cable assembly involved_inIMP 2290270 PMID:21620703UniProtPMID:21620703
Fmn2Mouseformin-nucleated actin cable assembly involved_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mouseformin-nucleated actin cable assembly involved_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mousehomologous chromosome movement towards spindle pole in meiosis I anaphase involved_inIMP 2290270 PMID:12447394BHF-UCLPMID:12447394
Fmn2Mouseintracellular transport involved_inIMP 2290270 PMID:21983562UniProtPMID:21983562
Fmn2Mousemeiotic chromosome movement towards spindle pole acts_upstream_of_or_withinIMP 2290270 PMID:23439682MGIPMID:23439682
Fmn2Mousenegative regulation of apoptotic process involved_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mousenegative regulation of apoptotic process involved_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
1 to 20 of 28 rows

Cellular Component
1 to 19 of 19 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouseactin cytoskeleton located_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mouseactin cytoskeleton located_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mouseactin filament located_inIEAInterPro:IPR0012652290270 InterProGO_REF:0000002
Fmn2Mousecell cortex located_inIDA 2290270 PMID:21983562UniProtPMID:21983562
Fmn2Mousecytoplasmic vesicle membrane located_inIDA 2290270 PMID:21983562UniProtPMID:21983562
Fmn2Mousecytosol located_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mousecytosol located_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mouseendoplasmic reticulum located_inIDA 2290270 PMID:23439682 and PMID:28992324MGIPMID:23439682 and PMID:28992324
Fmn2Mouseendoplasmic reticulum membrane is_active_inIBAPANTHER:PTN008545163 and MGI:18592522290270 GO_CentralGO_REF:0000033
Fmn2Mouseendoplasmic reticulum membrane located_inIDA 2290270 PMID:23439682MGIPMID:23439682
Fmn2Mousemicrovillus located_inIDA 2290270 PMID:23439682MGIPMID:23439682
Fmn2Mousenucleolus located_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mousenucleolus located_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mousenucleus located_inISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mousenucleus is_active_inIBAPANTHER:PTN008545163 more ...2290270 GO_CentralGO_REF:0000033
Fmn2Mousenucleus located_inISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mouseperinuclear region of cytoplasm located_inIEAUniProtKB-SubCell:SL-01982290270 UniProtGO_REF:0000044
Fmn2Mouseplasma membrane located_inIEAUniProtKB-SubCell:SL-00392290270 UniProtGO_REF:0000044
Fmn2Mousespindle located_inIDA 2290270 PMID:23439682MGIPMID:23439682
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Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fmn2Mouseactin binding enablesISOUniProtKB:Q9NZ562290270 GO_CentralGO_REF:0000119
Fmn2Mouseactin binding enablesISSUniProtKB:Q9NZ562290270 UniProtGO_REF:0000024
Fmn2Mousemicrotubule binding enablesIEAInterPro:IPR0012652290270 InterProGO_REF:0000002


#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:10349636   PMID:10781961   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12447394   PMID:12477932   PMID:12520002   PMID:12775772   PMID:15053972  
PMID:15572359   PMID:15747579   PMID:15866570   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17114649   PMID:17967808   PMID:18836438   PMID:18848445   PMID:19008955   PMID:19062278  
PMID:20448184   PMID:21135260   PMID:21267068   PMID:21620703   PMID:21653611   PMID:21705804   PMID:21873635   PMID:21983562   PMID:23110170   PMID:23264738   PMID:23439682   PMID:24586110  
PMID:24722338   PMID:25480035   PMID:26272686   PMID:26668326   PMID:26718007   PMID:27789627   PMID:27991490   PMID:28768717   PMID:28839045   PMID:28992324   PMID:29240780   PMID:29659741  
PMID:31040226   PMID:31607652   PMID:31937754   PMID:32245998   PMID:32325033   PMID:33547291   PMID:37248263   PMID:38086376   PMID:38387459  



Fmn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391174,324,079 - 174,650,295 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1174,329,391 - 174,650,295 (+)EnsemblGRCm39 Ensembl
GRCm381174,501,752 - 174,822,729 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1174,501,825 - 174,822,729 (+)EnsemblGRCm38mm10GRCm38
MGSCv371176,431,956 - 176,752,860 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361176,325,847 - 176,658,752 (+)NCBIMGSCv36mm8
Celera1181,581,367 - 181,911,120 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map181.04NCBI
FMN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381240,091,883 - 240,475,187 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1240,014,348 - 240,475,187 (+)EnsemblGRCh38hg38GRCh38
GRCh371240,255,183 - 240,638,487 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361238,321,604 - 238,705,112 (+)NCBINCBI36Build 36hg18NCBI36
Celera1213,510,402 - 213,893,529 (+)NCBICelera
Cytogenetic Map1q43NCBI
HuRef1210,713,436 - 211,096,763 (+)NCBIHuRef
CHM1_11241,528,744 - 241,910,469 (+)NCBICHM1_1
T2T-CHM13v2.01239,505,207 - 239,886,446 (+)NCBIT2T-CHM13v2.0
Fmn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81388,986,863 - 89,303,789 (+)NCBIGRCr8
mRatBN7.21386,454,256 - 86,771,437 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1386,453,926 - 86,771,411 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01392,569,256 - 92,887,302 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1392,569,785 - 92,672,821 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01397,035,682 - 97,352,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41390,205,332 - 90,520,323 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1386,056,421 - 86,372,278 (+)NCBICelera
Cytogenetic Map13q24NCBI
Fmn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540611,358,585 - 11,666,102 (-)NCBIChiLan1.0ChiLan1.0
FMN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan118,909,570 - 9,303,709 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01215,626,889 - 216,023,590 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11220,621,414 - 221,008,892 (+)NCBIpanpan1.1PanPan1.1panPan2
FMN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1731,657,371 - 32,024,777 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl731,697,245 - 32,023,472 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha731,194,870 - 31,564,912 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0731,478,304 - 31,849,271 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1731,315,799 - 31,687,109 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0731,348,230 - 31,718,511 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0731,586,597 - 31,957,372 (+)NCBIUU_Cfam_GSD_1.0
Fmn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934444,577,814 - 44,914,520 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365269,833,128 - 10,169,267 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365269,832,790 - 10,169,488 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FMN2
(Sus scrofa - pig)
No map positions available.
FMN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12577,187,572 - 77,585,773 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605579,293,686 - 79,693,875 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fmn2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477110,642,515 - 10,953,480 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477110,641,845 - 10,956,213 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Fmn2
21105 total Variants

Predicted Target Of
Summary Value
Count of predictions:387
Count of miRNA genes:288
Interacting mature miRNAs:313
Transcripts:ENSMUST00000030039
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 106 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
4141878Qrr1_mQTL rich region on chromosome 1 (mouse)Not determined170878743175320066Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1357854Sle16_msystematic lupus erythematosus susceptibility 16 (mouse)Not determined1169038741177377587Mouse
4142389Scfr1_mstem cell frequency regulator 1 (mouse)Not determined171632048189303617Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
1301016Szs1_mseizure susceptibility 1 (mouse)Not determined1170878743174456436Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160097157194097157Mouse

1 to 10 of 106 rows
G67086  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381174,602,815 - 174,603,333UniSTSGRCm38
MGSCv371176,532,946 - 176,533,464UniSTSGRCm37
Celera1181,690,512 - 181,691,031UniSTS
Cytogenetic Map1H3UniSTS
cM Map196.0UniSTS
D1Mit150  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381174,628,733 - 174,628,870UniSTSGRCm38
MGSCv371176,558,864 - 176,559,001UniSTSGRCm37
Celera1181,715,980 - 181,716,105UniSTS
Cytogenetic Map1H3UniSTS
cM Map1100.0UniSTS
Whitehead Genetic199.5UniSTS
Whitehead_YAC1 UniSTS
AU024104  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381174,822,567 - 174,822,647UniSTSGRCm38
MGSCv371176,752,698 - 176,752,778UniSTSGRCm37
Celera1181,910,958 - 181,911,038UniSTS
Cytogenetic Map1H3UniSTS
cM Map196.0UniSTS
Whitehead/MRC_RH12191.93UniSTS
Fmn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381174,821,811 - 174,822,012UniSTSGRCm38
MGSCv371176,751,942 - 176,752,143UniSTSGRCm37
Celera1181,910,202 - 181,910,403UniSTS
Cytogenetic Map1H3UniSTS
cM Map196.0UniSTS
D1Sta14  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381174,648,173 - 174,648,252UniSTSGRCm38
MGSCv371176,578,304 - 176,578,383UniSTSGRCm37
Celera1181,735,556 - 181,735,635UniSTS
Cytogenetic Map1H3UniSTS
cM Map197.7UniSTS
C85956  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381174,821,769 - 174,821,866UniSTSGRCm38
MGSCv371176,751,900 - 176,751,997UniSTSGRCm37
Celera1181,910,160 - 181,910,257UniSTS
Cytogenetic Map1H3UniSTS
cM Map196.0UniSTS
Whitehead/MRC_RH12191.93UniSTS
ha1938  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3889,371,339 - 9,372,238UniSTSGRCm38
GRCm381174,591,327 - 174,591,506UniSTSGRCm38
MGSCv3789,371,339 - 9,372,238UniSTSGRCm37
MGSCv371176,521,458 - 176,521,637UniSTSGRCm37
Celera89,543,465 - 9,544,364UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map1H3UniSTS
cM Map196.0UniSTS
Fmn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H3UniSTS







Ensembl Acc Id: ENSMUST00000030039   ⟹   ENSMUSP00000030039
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1174,329,391 - 174,650,295 (+)Ensembl
GRCm38.p6 Ensembl1174,501,825 - 174,822,729 (+)Ensembl
Ensembl Acc Id: ENSMUST00000191821
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1174,364,611 - 174,410,118 (+)Ensembl
GRCm38.p6 Ensembl1174,537,045 - 174,582,552 (+)Ensembl
Ensembl Acc Id: ENSMUST00000191971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1174,440,115 - 174,527,974 (+)Ensembl
GRCm38.p6 Ensembl1174,612,549 - 174,700,408 (+)Ensembl
Ensembl Acc Id: ENSMUST00000193905
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1174,541,892 - 174,648,837 (+)Ensembl
GRCm38.p6 Ensembl1174,714,326 - 174,821,271 (+)Ensembl
Ensembl Acc Id: ENSMUST00000195300
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1174,437,374 - 174,443,212 (+)Ensembl
GRCm38.p6 Ensembl1174,609,808 - 174,615,646 (+)Ensembl
Ensembl Acc Id: ENSMUST00000195621   ⟹   ENSMUSP00000142288
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1174,437,375 - 174,522,049 (+)Ensembl
GRCm38.p6 Ensembl1174,609,809 - 174,694,483 (+)Ensembl
RefSeq Acc Id: NM_019445   ⟹   NP_062318
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391174,329,391 - 174,650,295 (+)NCBI
GRCm381174,501,825 - 174,822,729 (+)ENTREZGENE
MGSCv371176,431,956 - 176,752,860 (+)RGD
Celera1181,581,367 - 181,911,120 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030255545   ⟹   XP_030111405
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391174,329,318 - 174,649,962 (+)NCBI
GRCm381174,501,752 - 174,822,396 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152433   ⟹   XP_036008326
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391174,324,079 - 174,460,592 (+)NCBI
Sequence:
1 to 10 of 10 rows
Protein RefSeqs NP_062318 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111405 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008326 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF72883 (Get FASTA)   NCBI Sequence Viewer  
  AAH94606 (Get FASTA)   NCBI Sequence Viewer  
  BAE24306 (Get FASTA)   NCBI Sequence Viewer  
  EDL13214 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000030039
  ENSMUSP00000030039.8
GenBank Protein Q9JL04 (Get FASTA)   NCBI Sequence Viewer  
1 to 10 of 10 rows
RefSeq Acc Id: NP_062318   ⟸   NM_019445
- UniProtKB: Q505D3 (UniProtKB/Swiss-Prot),   Q9JL04 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030111405   ⟸   XM_030255545
- Peptide Label: isoform X2
Ensembl Acc Id: ENSMUSP00000030039   ⟸   ENSMUST00000030039
Ensembl Acc Id: ENSMUSP00000142288   ⟸   ENSMUST00000195621
RefSeq Acc Id: XP_036008326   ⟸   XM_036152433
- Peptide Label: isoform X1
FH1   FH2

Name Modeler Protein Id AA Range Protein Structure
AF-Q9JL04-F1-model_v2 AlphaFold Q9JL04 1-1578 view protein structure

RGD ID:6875832
Promoter ID:EPDNEW_M1367
Type:initiation region
Name:Fmn2_1
Description:Mus musculus formin 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1368  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381174,501,838 - 174,501,898EPDNEW
RGD ID:6875834
Promoter ID:EPDNEW_M1368
Type:single initiation site
Name:Fmn2_2
Description:Mus musculus formin 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1367  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381174,624,227 - 174,624,287EPDNEW
RGD ID:6817732
Promoter ID:MM_KWN:2996
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell
Transcripts:ENSMUST00000085858,   NM_019445,   UC007DTC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361176,432,031 - 176,433,582 (+)MPROMDB


1 to 24 of 24 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000028354 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000030039 ENTREZGENE
  ENSMUST00000030039.13 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.58.2220 UniProtKB/Swiss-Prot
InterPro FH2_Formin UniProtKB/Swiss-Prot
  FH2_Formin_sf UniProtKB/Swiss-Prot
  Formin_Cappuccino_subfam UniProtKB/Swiss-Prot
KEGG Report mmu:54418 UniProtKB/Swiss-Prot
MGD MGI:1859252 ENTREZGENE
NCBI Gene 54418 ENTREZGENE
PANTHER FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I UniProtKB/Swiss-Prot
  FORMIN-G UniProtKB/Swiss-Prot
Pfam FH2 UniProtKB/Swiss-Prot
PhenoGen Fmn2 PhenoGen
PRINTS FORMIN UniProtKB/Swiss-Prot
PROSITE FH2 UniProtKB/Swiss-Prot
SMART FH2 UniProtKB/Swiss-Prot
Superfamily-SCOP Formin homology 2 domain (FH2 domain) UniProtKB/Swiss-Prot
UniProt A0A0A6YY57_MOUSE UniProtKB/TrEMBL
  FMN2_MOUSE UniProtKB/Swiss-Prot
  Q3USM5_MOUSE UniProtKB/TrEMBL
  Q505D3 ENTREZGENE
  Q9JL04 ENTREZGENE
UniProt Secondary Q505D3 UniProtKB/Swiss-Prot
1 to 24 of 24 rows