FMN2 (formin 2) - Rat Genome Database

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Gene: FMN2 (formin 2) Pan paniscus
Analyze
Symbol: FMN2
Name: formin 2
RGD ID: 11727005
Description: ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 47 (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: formin-2; formin-2-like; LOC106634280
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan118,909,570 - 9,303,709 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01215,626,889 - 216,023,590 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11220,621,414 - 221,008,892 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FMN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan118,909,570 - 9,303,709 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01215,626,889 - 216,023,590 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11220,621,414 - 221,008,892 (+)NCBIpanpan1.1PanPan1.1panPan2
FMN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381240,091,883 - 240,475,187 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1240,014,348 - 240,475,187 (+)EnsemblGRCh38hg38GRCh38
GRCh371240,255,183 - 240,638,487 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361238,321,604 - 238,705,112 (+)NCBINCBI36Build 36hg18NCBI36
Celera1213,510,402 - 213,893,529 (+)NCBICelera
Cytogenetic Map1q43NCBI
HuRef1210,713,436 - 211,096,763 (+)NCBIHuRef
CHM1_11241,528,744 - 241,910,469 (+)NCBICHM1_1
T2T-CHM13v2.01239,505,207 - 239,886,446 (+)NCBIT2T-CHM13v2.0
Fmn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391174,324,079 - 174,650,295 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1174,329,391 - 174,650,295 (+)EnsemblGRCm39 Ensembl
GRCm381174,501,752 - 174,822,729 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1174,501,825 - 174,822,729 (+)EnsemblGRCm38mm10GRCm38
MGSCv371176,431,956 - 176,752,860 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361176,325,847 - 176,658,752 (+)NCBIMGSCv36mm8
Celera1181,581,367 - 181,911,120 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map181.04NCBI
Fmn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81388,986,863 - 89,303,789 (+)NCBIGRCr8
mRatBN7.21386,454,256 - 86,771,437 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1386,453,926 - 86,771,411 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01392,569,256 - 92,887,302 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1392,569,785 - 92,672,821 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01397,035,682 - 97,352,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41390,205,332 - 90,520,323 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1386,056,421 - 86,372,278 (+)NCBICelera
Cytogenetic Map13q24NCBI
Fmn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540611,358,585 - 11,666,102 (-)NCBIChiLan1.0ChiLan1.0
FMN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1731,657,371 - 32,024,777 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl731,697,245 - 32,023,472 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha731,194,870 - 31,564,912 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0731,478,304 - 31,849,271 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1731,315,799 - 31,687,109 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0731,348,230 - 31,718,511 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0731,586,597 - 31,957,372 (+)NCBIUU_Cfam_GSD_1.0
Fmn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934444,577,814 - 44,914,520 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365269,833,128 - 10,169,267 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365269,832,790 - 10,169,488 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FMN2
(Sus scrofa - pig)		 No map positions available.
FMN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12577,187,572 - 77,585,773 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605579,293,686 - 79,693,875 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fmn2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477110,642,515 - 10,953,480 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477110,641,845 - 10,956,213 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_034949691   ⟹   XP_034805582
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBI
NHGRI_mPanPan118,909,570 - 9,303,701 (-)NCBI
Mhudiblu_PPA_v01215,626,889 - 216,023,590 (+)NCBI
RefSeq Acc Id: XM_055098048   ⟹   XP_054954023
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBI
NHGRI_mPanPan118,909,570 - 9,303,702 (-)NCBI
RefSeq Acc Id: XM_055098105   ⟹   XP_054954080
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBI
NHGRI_mPanPan118,909,570 - 9,303,698 (-)NCBI
RefSeq Acc Id: XM_055098129   ⟹   XP_054954104
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBI
NHGRI_mPanPan118,909,570 - 9,303,699 (-)NCBI
RefSeq Acc Id: XM_063594660   ⟹   XP_063450730
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,922,737 - 9,078,536 (-)NCBI
RefSeq Acc Id: XM_063594698   ⟹   XP_063450768
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,686,548 - 9,078,536 (-)NCBI
RefSeq Acc Id: XR_010109223
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v218,909,916 - 9,078,536 (-)NCBI
RefSeq Acc Id: XP_034805582   ⟸   XM_034949691
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054954023   ⟸   XM_055098048
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054954104   ⟸   XM_055098129
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054954080   ⟸   XM_055098105
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063450768   ⟸   XM_063594698
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063450730   ⟸   XM_063594660
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
NCBI Gene FMN2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-08 FMN2  formin 2  LOC106634280  formin-2-like  Data merged from RGD:12040996 737654 PROVISIONAL