Gabarap (gamma-aminobutyric acid receptor associated protein) - Rat Genome Database

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Gene: Gabarap (gamma-aminobutyric acid receptor associated protein) Mus musculus
Analyze
Symbol: Gabarap
Name: gamma-aminobutyric acid receptor associated protein
RGD ID: 62204
MGI Page MGI
Description: Enables microtubule binding activity. Acts upstream of or within microtubule cytoskeleton organization. Located in several cellular components, including cytoskeleton; smooth endoplasmic reticulum; and sperm midpiece. Part of microtubule associated complex. Is expressed in retina inner plexiform layer and spinal cord. Orthologous to human GABARAP (GABA type A receptor-associated protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GABA(A) receptor-associated protein; GABA-A receptor-associated protein; gamma-aminobutyric acid receptor-associated protein; gamma-aminobutyric acid reseptor associated protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,882,196 - 69,885,775 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,881,969 - 69,885,777 (+)EnsemblGRCm39 Ensembl
GRCm381169,991,370 - 69,994,949 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,991,143 - 69,994,951 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,804,872 - 69,808,451 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,807,565 - 69,811,141 (+)NCBIMGSCv36mm8
Celera1177,539,180 - 77,542,759 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
autophagy pathway  (IEA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Network organization of the human autophagy system. Behrends C, etal., Nature. 2010 Jul 1;466(7302):68-76. Epub 2010 Jun 20.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. LC3 conjugation system in mammalian autophagy. Tanida I, etal., Int J Biochem Cell Biol. 2004 Dec;36(12):2503-18.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10899939   PMID:10900017   PMID:11042159   PMID:11076861   PMID:11146101   PMID:11890701   PMID:12477932   PMID:14610273   PMID:15365296   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:16307606   PMID:16602821   PMID:16874098   PMID:16954214   PMID:17916189   PMID:18451111   PMID:18497328   PMID:18799693   PMID:19225049   PMID:20010802  
PMID:20354864   PMID:20577052   PMID:21267068   PMID:21383079   PMID:21388957   PMID:21677750   PMID:21873635   PMID:22033522   PMID:22049402   PMID:22948227   PMID:23427251   PMID:23671684  
PMID:24089209   PMID:24240096   PMID:24747438   PMID:27124579   PMID:27899360   PMID:28320742   PMID:28497576   PMID:28604719   PMID:30504823   PMID:32325033   PMID:32876528   PMID:33042141  
PMID:33436612   PMID:33591943   PMID:34338405   PMID:36113482   PMID:37434364  


Genomics

Comparative Map Data
Gabarap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,882,196 - 69,885,775 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,881,969 - 69,885,777 (+)EnsemblGRCm39 Ensembl
GRCm381169,991,370 - 69,994,949 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,991,143 - 69,994,951 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,804,872 - 69,808,451 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,807,565 - 69,811,141 (+)NCBIMGSCv36mm8
Celera1177,539,180 - 77,542,759 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.95NCBI
GABARAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,240,008 - 7,242,449 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,240,008 - 7,242,449 (-)EnsemblGRCh38hg38GRCh38
GRCh37177,143,327 - 7,145,768 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,084,462 - 7,086,477 (-)NCBINCBI36Build 36hg18NCBI36
Build 34177,084,462 - 7,086,477NCBI
Celera177,168,385 - 7,170,397 (-)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef177,035,144 - 7,037,156 (-)NCBIHuRef
CHM1_1177,152,530 - 7,154,546 (-)NCBICHM1_1
T2T-CHM13v2.0177,140,933 - 7,143,371 (-)NCBIT2T-CHM13v2.0
Gabarap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81055,213,465 - 55,216,787 (+)NCBIGRCr8
mRatBN7.21054,714,777 - 54,718,099 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,714,198 - 54,717,765 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1059,376,972 - 59,380,294 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01058,865,552 - 58,868,874 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01054,372,830 - 54,376,146 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01056,601,288 - 56,604,223 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,601,288 - 56,604,221 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,346,407 - 56,349,342 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,837,772 - 56,840,707 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11056,851,394 - 56,854,330 (+)NCBI
Celera1053,868,419 - 53,871,353 (+)NCBICelera
Cytogenetic Map10q24NCBI
Gabarap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,667,941 - 9,670,067 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,667,938 - 9,670,067 (+)NCBIChiLan1.0ChiLan1.0
GABARAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21914,833,095 - 14,836,107 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11716,799,099 - 16,801,668 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0177,270,316 - 7,272,365 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1177,257,659 - 7,260,276 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,257,659 - 7,260,276 (-)Ensemblpanpan1.1panPan2
GABARAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,207,879 - 32,209,976 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,207,887 - 32,209,908 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,346,200 - 32,348,297 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,313,526 - 32,315,623 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,313,534 - 32,315,555 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,278,810 - 32,280,907 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,237,838 - 32,239,935 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,414,791 - 32,416,888 (-)NCBIUU_Cfam_GSD_1.0
Gabarap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,059,854 - 47,061,872 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936595533,977 - 536,271 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936595534,042 - 536,289 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GABARAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,596,543 - 52,598,194 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,596,130 - 52,598,166 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,842,339 - 54,844,400 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GABARAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,614,478 - 6,616,516 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl166,614,688 - 6,616,443 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605914,793,285 - 14,796,280 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gabarap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247869,857,370 - 9,860,063 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247869,857,370 - 9,859,675 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gabarap
78 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:540
Count of miRNA genes:276
Interacting mature miRNAs:312
Transcripts:ENSMUST00000018711, ENSMUST00000108592, ENSMUST00000139007, ENSMUST00000144443
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116899082672490826Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116899082672490826Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116899082672490826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116899082672490826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116899082672490826Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116899082672490826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116899082672490826Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116899082672490826Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116899082672490826Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse

Markers in Region
RH128955  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,994,769 - 69,994,944UniSTSGRCm38
MGSCv371169,808,271 - 69,808,446UniSTSGRCm37
Celera1177,542,579 - 77,542,754UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map11B4UniSTS
cM Map1142.0UniSTS
UniSTS:224312  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,994,831 - 69,994,943UniSTSGRCm38
MGSCv371169,808,333 - 69,808,445UniSTSGRCm37
Celera1177,542,641 - 77,542,753UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map11B3UniSTS
cM Map1142.0UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000018711   ⟹   ENSMUSP00000018711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1169,881,969 - 69,885,777 (+)Ensembl
GRCm38.p6 Ensembl1169,991,143 - 69,994,951 (+)Ensembl
RefSeq Acc Id: ENSMUST00000108592   ⟹   ENSMUSP00000104233
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1169,882,465 - 69,885,766 (+)Ensembl
GRCm38.p6 Ensembl1169,991,639 - 69,994,940 (+)Ensembl
RefSeq Acc Id: ENSMUST00000139007
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1169,882,633 - 69,883,427 (+)Ensembl
GRCm38.p6 Ensembl1169,991,807 - 69,992,601 (+)Ensembl
RefSeq Acc Id: ENSMUST00000144443
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1169,882,510 - 69,885,761 (+)Ensembl
GRCm38.p6 Ensembl1169,991,684 - 69,994,935 (+)Ensembl
RefSeq Acc Id: NM_019749   ⟹   NP_062723
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,882,196 - 69,885,775 (+)NCBI
GRCm381169,991,370 - 69,994,949 (+)NCBI
MGSCv371169,804,872 - 69,808,451 (+)RGD
Celera1177,539,180 - 77,542,759 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_062723   ⟸   NM_019749
- UniProtKB: B1AR49 (UniProtKB/Swiss-Prot),   Q9QUI7 (UniProtKB/Swiss-Prot),   Q9DCD6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000104233   ⟸   ENSMUST00000108592
RefSeq Acc Id: ENSMUSP00000018711   ⟸   ENSMUST00000018711

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DCD6-F1-model_v2 AlphaFold Q9DCD6 1-117 view protein structure

Promoters
RGD ID:6820911
Promoter ID:MM_KWN:8165
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000108592,   OTTMUST00000013495,   OTTMUST00000013496,   OTTMUST00000013497
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361169,804,501 - 69,805,617 (+)MPROMDB
RGD ID:8675274
Promoter ID:EPDNEW_M15667
Type:initiation region
Name:Gabarap_1
Description:Mus musculus gamma-aminobutyric acid receptor associated protein, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381169,991,592 - 69,991,652EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1861742 AgrOrtholog
Ensembl Genes ENSMUSG00000018567 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018711 ENTREZGENE
  ENSMUST00000018711.15 UniProtKB/Swiss-Prot
  ENSMUST00000108592.2 UniProtKB/TrEMBL
InterPro Atg8-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56486 UniProtKB/Swiss-Prot
MGD MGI:1861742 ENTREZGENE
NCBI Gene 56486 ENTREZGENE
PANTHER GAMMA-AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10969 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Atg8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gabarap PhenoGen
Superfamily-SCOP SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1S6GWH0_MOUSE UniProtKB/TrEMBL
  B1AR49 ENTREZGENE
  B1AR50_MOUSE UniProtKB/TrEMBL
  GBRAP_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q9QUI7 ENTREZGENE
UniProt Secondary B1AR49 UniProtKB/Swiss-Prot
  Q9QUI7 UniProtKB/Swiss-Prot