Pygl (liver glycogen phosphorylase) - Rat Genome Database

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Gene: Pygl (liver glycogen phosphorylase) Mus musculus
Analyze
Symbol: Pygl
Name: liver glycogen phosphorylase
RGD ID: 731804
MGI Page MGI
Description: Enables glycogen phosphorylase activity. Involved in glycogen catabolic process. Acts upstream of or within necroptotic process and response to bacterium. Predicted to be active in cytoplasm. Is expressed in several structures, including alimentary system; central nervous system; cranium; sensory organ; and urinary system. Used to study glycogen storage disease VI. Human ortholog(s) of this gene implicated in glycogen storage disease; glycogen storage disease VI; and lactic acidosis. Orthologous to human PYGL (glycogen phosphorylase L).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: glycogen phosphorylase, liver form
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391270,237,589 - 70,274,457 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1270,237,585 - 70,278,262 (-)EnsemblGRCm39 Ensembl
GRCm381270,190,815 - 70,227,683 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1270,190,811 - 70,231,488 (-)EnsemblGRCm38mm10GRCm38
MGSCv371271,291,802 - 71,328,670 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361271,109,416 - 71,146,222 (-)NCBIMGSCv36mm8
Celera1271,292,479 - 71,327,360 (-)NCBICelera
Cytogenetic Map12C2NCBI
cM Map1229.01NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
1H-pyrazole  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4'-hydroxyacetophenone  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acetylsalicylic acid  (ISO)
acrylamide  (ISO)
acrylamides  (ISO)
aldehydo-D-glucose  (ISO)
aluminium phosphide  (ISO)
alvocidib  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
atrazine  (ISO)
benzamide  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (EXP,ISO)
buspirone  (ISO)
cadmium dichloride  (ISO)
Calcimycin  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
chloroacetaldehyde  (ISO)
chloroacetic acid  (EXP)
chloroform  (ISO)
chloropicrin  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (ISO)
dexamethasone  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dichlorvos  (ISO)
Diosbulbin B  (EXP)
dioxygen  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
erythromycin estolate  (ISO)
fenofibrate  (ISO)
Geniposide  (EXP)
glafenine  (ISO)
glucose  (ISO)
glyphosate  (EXP)
ibuprofen  (ISO)
ifosfamide  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
ketoconazole  (ISO)
L-ethionine  (ISO)
malathion  (ISO)
metformin  (ISO)
methylarsonite  (EXP)
methylmercury chloride  (ISO)
Muraglitazar  (ISO)
N-acetyl-L-cysteine  (ISO)
N-nitrosomorpholine  (ISO)
nefazodone  (ISO)
neostigmine  (ISO)
nickel dichloride  (ISO)
nicotinamide  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
omeprazole  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
phentolamine  (ISO)
phenylephrine  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
procyanidin B1  (EXP,ISO)
pyrogallol  (EXP)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium dichromate  (ISO)
streptozocin  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
Triptolide  (ISO)
troglitazone  (ISO)
tungsten  (EXP)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vanillin  (ISO)
vorinostat  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. High frequency of missense mutations in glycogen storage disease type VI. Beauchamp NJ, etal., J Inherit Metab Dis. 2007 Oct;30(5):722-34. Epub 2007 Aug 21.
2. Structural relationships among regulated and unregulated phosphorylases. Buchbinder JL, etal., Annu Rev Biophys Biomol Struct. 2001;30:191-209.
3. Identification of a mutation in liver glycogen phosphorylase in glycogen storage disease type VI. Chang S, etal., Hum Mol Genet. 1998 May;7(5):865-70.
4. Liver glycogen storage diseases due to phosphorylase system deficiencies: diagnosis thanks to non invasive blood enzymatic and molecular studies. Davit-Spraul A, etal., Mol Genet Metab. 2011 Sep-Oct;104(1-2):137-43. doi: 10.1016/j.ymgme.2011.05.010. Epub 2011 May 17.
5. Defect in glucokinase translocation in Zucker diabetic fatty rats. Fujimoto Y, etal., Am J Physiol Endocrinol Metab. 2004 Sep;287(3):E414-23. Epub 2004 May 11.
6. Localization of the muscle, liver, and brain glycogen phosphorylase genes on linkage maps of mouse chromosomes 19, 12, and 2, respectively. Glaser T, etal., Genomics 1989 Oct;5(3):510-21.
7. Glycogen phosphorylase: control by phosphorylation and allosteric effectors. Johnson LN FASEB J. 1992 Mar;6(6):2274-82.
8. Response of glucose metabolism enzymes in an acute porphyria model. Role of reactive oxygen species. Lelli SM, etal., Toxicology. 2005 Dec;216(1):49-58. Epub 2005 Aug 24.
9. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
10. MGDs mouse GO annotations MGD data from the GO Consortium
11. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
12. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
13. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
14. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
15. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. Glycogen-binding protein components of rat tissues. Satoh K and Sato K, Biochem Biophys Res Commun. 1980 Sep 16;96(1):28-33.
18. Proteomic investigation of signatures for geniposide-induced hepatotoxicity. Wei J, etal., J Proteome Res. 2014 Dec 5;13(12):5724-33. doi: 10.1021/pr5007119. Epub 2014 Oct 30.
Additional References at PubMed
PMID:2459056   PMID:8275705   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11960689   PMID:12477932   PMID:14681479   PMID:16141072   PMID:16141073  
PMID:17937387   PMID:18973680   PMID:19275933   PMID:19498109   PMID:21184805   PMID:21565611   PMID:21677750   PMID:21873635   PMID:22225877   PMID:22323595   PMID:22794259   PMID:23012479  
PMID:23260145   PMID:24275123   PMID:26930384   PMID:27215380   PMID:27689697   PMID:27754788   PMID:30457570   PMID:31524221   PMID:31693883   PMID:31701076   PMID:32325033   PMID:32798765  
PMID:33230847   PMID:34673295   PMID:36077341  


Genomics

Comparative Map Data
Pygl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391270,237,589 - 70,274,457 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1270,237,585 - 70,278,262 (-)EnsemblGRCm39 Ensembl
GRCm381270,190,815 - 70,227,683 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1270,190,811 - 70,231,488 (-)EnsemblGRCm38mm10GRCm38
MGSCv371271,291,802 - 71,328,670 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361271,109,416 - 71,146,222 (-)NCBIMGSCv36mm8
Celera1271,292,479 - 71,327,360 (-)NCBICelera
Cytogenetic Map12C2NCBI
cM Map1229.01NCBI
PYGL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381450,905,217 - 50,944,483 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1450,857,891 - 50,944,483 (-)EnsemblGRCh38hg38GRCh38
GRCh371451,371,935 - 51,411,201 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361450,441,687 - 50,480,984 (-)NCBINCBI36Build 36hg18NCBI36
Build 341450,441,688 - 50,480,984NCBI
Celera1431,238,983 - 31,278,301 (-)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1431,497,509 - 31,536,798 (-)NCBIHuRef
CHM1_11451,310,446 - 51,349,770 (-)NCBICHM1_1
T2T-CHM13v2.01445,111,656 - 45,150,908 (-)NCBIT2T-CHM13v2.0
Pygl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2688,697,598 - 88,740,260 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl688,697,593 - 88,740,310 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx689,096,834 - 89,133,820 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0689,396,285 - 89,433,272 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0688,835,817 - 88,872,806 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0692,597,759 - 92,643,734 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl692,597,706 - 92,643,847 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06102,045,144 - 102,091,119 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4692,298,339 - 92,341,347 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1692,301,796 - 92,344,803 (-)NCBI
Celera687,191,869 - 87,228,313 (-)NCBICelera
Cytogenetic Map6q24NCBI
Pygl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540911,970,112 - 12,007,102 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540911,970,112 - 12,007,102 (+)NCBIChiLan1.0ChiLan1.0
PYGL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan11451,234,331 - 51,299,970 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01431,494,172 - 31,533,545 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11449,793,210 - 49,832,786 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1449,746,309 - 49,832,786 (-)Ensemblpanpan1.1panPan2
PYGL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1827,264,778 - 27,307,977 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl827,223,273 - 27,307,977 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha827,018,142 - 27,061,230 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0827,443,863 - 27,486,861 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl827,401,678 - 27,486,986 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1827,098,985 - 27,141,894 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0827,171,662 - 27,214,570 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0827,519,107 - 27,562,008 (-)NCBIUU_Cfam_GSD_1.0
Pygl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864059,463,043 - 59,498,992 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649514,692,332 - 14,730,231 (+)EnsemblSpeTri2.0
SpeTri2.0NW_00493649514,692,688 - 14,728,663 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PYGL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1180,620,314 - 180,719,979 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11180,645,849 - 180,704,124 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21200,933,155 - 200,991,988 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PYGL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12427,987,676 - 28,030,919 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2427,987,649 - 28,030,869 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605316,283,872 - 16,325,710 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pygl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473117,990,977 - 18,028,186 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473117,990,877 - 18,028,351 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pygl
1210 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:450
Count of miRNA genes:284
Interacting mature miRNAs:312
Transcripts:ENSMUST00000071250, ENSMUST00000161083, ENSMUST00000161840, ENSMUST00000162613, ENSMUST00000166609
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
12832727Ahrq1_mairway hyperresponsiveness QTL 1 (mouse)125469591082665939Mouse
13504832Bacszq2_mbaculum size QTL 2 (mouse)125694579875345787Mouse
27226728Tibl20_mtibia length 20, 16 week (mouse)125914678693866774Mouse
27226776Tibl6_mtibia length 6, 5 week (mouse)126064678692666774Mouse
10043948Pbft6_mpercent body fat 6 (mouse)Not determined126120542795205427Mouse
1301476Pbwg12_mpostnatal body weight growth 12 (mouse)Not determined126204016496040364Mouse
27226797Scvln19_msacral vertebrae length 2, 16 week (mouse)126214678699466259Mouse
10043895Bw20_mbody weight QTL 20 (mouse)Not determined126230825296308252Mouse
1301046Par3_mpulmonary adenoma resistance 3 (mouse)Not determined126395670897956883Mouse
1301337Cdcs8_mcytokine deficiency colitis susceptibility 8 (mouse)Not determined126468908398689229Mouse
1300633Cdcs7_mcytokine deficiency colitis susceptibility 7 (mouse)Not determined126468908398689229Mouse
14746976Manh73_mmandible shape 73 (mouse)126585713199857131Mouse
27226771Tibl14_mtibia length 14, 10 week (mouse)126834677498766259Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse

Markers in Region
Pygl  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12C2UniSTS
cM Map1230.0UniSTS
Pygl  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12C2UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000071250   ⟹   ENSMUSP00000071231
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1270,237,585 - 70,274,457 (-)Ensembl
GRCm38.p6 Ensembl1270,190,811 - 70,227,683 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161083   ⟹   ENSMUSP00000125585
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1270,237,593 - 70,278,262 (-)Ensembl
GRCm38.p6 Ensembl1270,190,819 - 70,231,488 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161840
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1270,257,565 - 70,274,386 (-)Ensembl
GRCm38.p6 Ensembl1270,210,791 - 70,227,612 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162613
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1270,244,173 - 70,244,615 (-)Ensembl
GRCm38.p6 Ensembl1270,197,399 - 70,197,841 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166609
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1270,261,122 - 70,274,119 (-)Ensembl
GRCm38.p6 Ensembl1270,214,348 - 70,227,345 (-)Ensembl
RefSeq Acc Id: ENSMUST00000222093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1270,250,973 - 70,254,122 (-)Ensembl
GRCm38.p6 Ensembl1270,204,199 - 70,207,348 (-)Ensembl
RefSeq Acc Id: NM_133198   ⟹   NP_573461
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391270,237,589 - 70,274,457 (-)NCBI
GRCm381270,190,815 - 70,227,683 (-)ENTREZGENE
MGSCv371271,291,802 - 71,328,670 (-)RGD
Celera1271,292,479 - 71,327,360 (-)RGD
cM Map12 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_573461   ⟸   NM_133198
- UniProtKB: Q3UKJ0 (UniProtKB/Swiss-Prot),   Q9ET01 (UniProtKB/Swiss-Prot),   Q91WP9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000071231   ⟸   ENSMUST00000071250
RefSeq Acc Id: ENSMUSP00000125585   ⟸   ENSMUST00000161083

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ET01-F1-model_v2 AlphaFold Q9ET01 1-850 view protein structure

Promoters
RGD ID:6823303
Promoter ID:MM_KWN:11842
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Spleen
Transcripts:OTTMUST00000063918
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361271,298,456 - 71,298,956 (-)MPROMDB
RGD ID:6823356
Promoter ID:MM_KWN:11843
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000063841,   OTTMUST00000063915,   OTTMUST00000063917
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361271,327,801 - 71,328,752 (+)MPROMDB
RGD ID:6823301
Promoter ID:MM_KWN:11844
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:OTTMUST00000063916
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361271,332,406 - 71,333,102 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97829 AgrOrtholog
Ensembl Genes ENSMUSG00000021069 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000071231 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000125585.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000071250 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000161083.2 UniProtKB/TrEMBL
Gene3D-CATH Glycogen Phosphorylase B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Glycg_phsphrylas UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_trans_35 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pyridoxal_P_attach_site UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:110095 UniProtKB/Swiss-Prot
MGD MGI:97829 ENTREZGENE
NCBI Gene 110095 ENTREZGENE
PANTHER GLYCOGEN PHOSPHORYLASE, LIVER FORM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11468 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Phosphorylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pygl PhenoGen
PIRSF Pprylas_GlgP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PHOSPHORYLASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt PYGL_MOUSE UniProtKB/Swiss-Prot
  Q3TJQ7_MOUSE UniProtKB/TrEMBL
  Q3UEJ6_MOUSE UniProtKB/TrEMBL
  Q3UKJ0 ENTREZGENE
  Q8BLV0_MOUSE UniProtKB/TrEMBL
  Q91WP9 ENTREZGENE, UniProtKB/TrEMBL
  Q9ET01 ENTREZGENE
UniProt Secondary Q3UKJ0 UniProtKB/Swiss-Prot