Trex1 (three prime repair exonuclease 1) - Rat Genome Database
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Gene: Trex1 (three prime repair exonuclease 1) Mus musculus
Analyze
Symbol: Trex1
Name: three prime repair exonuclease 1
RGD ID: 1320018
MGI Page MGI
Description: Used to study Aicardi-Goutieres syndrome and cutaneous lupus erythematosus. Human ortholog(s) of this gene implicated in Aicardi-Goutieres syndrome; Chilblain lupus; retinal vasculopathy with cerebral leukodystrophy; and systemic lupus erythematosus. Orthologous to human TREX1 (three prime repair exonuclease 1); PARTICIPATES IN DNA replication pathway; G2/M DNA damage checkpoint pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1661; 3'-5' exonuclease TREX1; AU041952; DNase III; three prime exonuclease 1; three-prime repair exonuclease 1; trophoblast expressed 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,887,000 - 108,888,791 (-)NCBIGRCm39mm39
GRCm39 Ensembl9108,887,001 - 108,888,802 (-)Ensembl
GRCm389109,057,932 - 109,059,723 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9109,057,933 - 109,059,734 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,960,446 - 108,962,237 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,915,338 - 108,917,129 (-)NCBImm8
Celera9108,616,714 - 108,618,505 (-)NCBICelera
Cytogenetic Map9F2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of immune response  (IMP)
adaptive immune response  (IMP)
apoptotic cell clearance  (IMP)
atrial cardiac muscle tissue development  (IMP)
blood vessel development  (IMP)
CD86 biosynthetic process  (IMP)
cellular response to DNA damage stimulus  (IDA)
cellular response to gamma radiation  (IMP)
cellular response to hydroxyurea  (IMP)
cellular response to interferon-beta  (IDA)
cellular response to organic substance  (IMP)
cellular response to oxidative stress  (IMP)
cellular response to reactive oxygen species  (IMP)
cellular response to type I interferon  (IMP)
cellular response to UV  (IDA)
defense response to virus  (IMP)
detection of DNA damage stimulus involved in DNA damage checkpoint  (IMP)
detection of stimulus involved in cell cycle checkpoint  (IMP)
determination of adult lifespan  (IGI,IMP)
DNA catabolic process  (IDA,IMP)
DNA catabolic process, exonucleolytic  (IBA)
DNA duplex unwinding  (IDA)
DNA metabolic process  (IDA)
DNA modification  (IMP)
DNA replication  (IMP)
DNA synthesis involved in UV-damage excision repair  (IMP)
establishment of protein localization  (IMP)
generation of precursor metabolites and energy  (IMP)
heart morphogenesis  (IMP)
heart process  (IMP)
immune complex formation  (IMP)
immune response  (IMP)
immune response in brain or nervous system  (IMP)
inflammatory response  (IMP)
inflammatory response to antigenic stimulus  (IMP)
innate immune response  (IMP)
kidney development  (IMP)
lymphoid progenitor cell differentiation  (IMP)
macrophage activation involved in immune response  (IMP)
negative regulation of type I interferon-mediated signaling pathway  (IMP)
organ or tissue specific immune response  (IMP)
protein stabilization  (IDA)
regulation of catalytic activity  (IMP)
regulation of cellular metabolic process  (IGI,IMP)
regulation of cellular respiration  (IMP)
regulation of fatty acid metabolic process  (IMP)
regulation of gene expression  (IGI,IMP)
regulation of glycolytic process  (IMP)
regulation of immunoglobulin production  (IGI,IMP)
regulation of inflammatory response  (IGI)
regulation of innate immune response  (IMP)
regulation of lipid biosynthetic process  (IGI)
regulation of lysosome organization  (IMP)
regulation of protein complex stability  (IMP)
regulation of T cell activation  (IGI)
regulation of tumor necrosis factor production  (IMP)
regulation of type I interferon production  (IGI,IMP)
response to UV  (IMP)
signal transduction involved in DNA damage checkpoint  (IMP)
T cell antigen processing and presentation  (IMP)
transposition, RNA-mediated  (IMP)
type I interferon signaling pathway  (IMP)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal atrial thrombosis  (IAGP)
abnormal heart morphology  (IAGP)
abnormal immune system organ morphology  (IAGP)
abnormal interferon secretion  (IAGP)
abnormal kidney morphology  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal spleen B cell follicle morphology  (IAGP)
abnormal spleen marginal zone morphology  (IAGP)
abnormal T cell activation  (IAGP)
atelectasis  (IAGP)
bronchiolitis  (IAGP)
cardiac fibrosis  (IAGP)
cardiomyopathy  (IAGP)
colitis  (IAGP)
congestive heart failure  (IAGP)
decreased litter size  (IAGP)
dermatitis  (IAGP)
dilated heart atrium  (IAGP)
dilated heart ventricle  (IAGP)
enlarged heart  (IAGP)
enlarged lymph nodes  (IAGP)
enlarged spleen  (IAGP)
folliculitis  (IAGP)
glomerulonephritis  (IAGP)
heart inflammation  (IAGP)
hepatic necrosis  (IAGP)
increased anti-double stranded DNA antibody level  (IAGP)
increased anti-nuclear antigen antibody level  (IAGP)
increased autoantibody level  (IAGP)
increased B cell number  (IAGP)
increased CD4-positive, alpha beta T cell number  (IAGP)
increased IgG level  (IAGP)
increased inflammatory response  (IAGP)
increased plasma cell number  (IAGP)
increased regulatory T cell number  (IAGP)
increased spleen weight  (IAGP)
increased splenocyte number  (IAGP)
increased susceptibility to autoimmune disorder  (IAGP)
increased susceptibility to Retroviridae infection  (IAGP)
increased susceptibility to systemic lupus erythematosus  (IAGP)
kidney inflammation  (IAGP)
lacrimal gland inflammation  (IAGP)
liver vascular congestion  (IAGP)
lymphoid hyperplasia  (IAGP)
myocardial fiber degeneration  (IAGP)
myocarditis  (IAGP)
myositis  (IAGP)
pancreas inflammation  (IAGP)
premature death  (IAGP)
renal glomerular immunoglobulin deposits  (IAGP)
renal necrosis  (IAGP)
salivary gland inflammation  (IAGP)
skin inflammation  (IAGP)
skin lesions  (IAGP)
stomach inflammation  (IAGP)
thymus cortex hypoplasia  (IAGP)
tubular nephritis  (IAGP)
tubulointerstitial nephritis  (IAGP)
vascular inflammation  (IAGP)
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10391904   PMID:10501965   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11278605   PMID:11279105   PMID:12466851  
PMID:12477932   PMID:14610273   PMID:15254239   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16713580   PMID:16783635   PMID:17293595   PMID:17355961   PMID:17660818   PMID:18045533  
PMID:18724932   PMID:18799693   PMID:19158679   PMID:19442247   PMID:19923437   PMID:20511593   PMID:20871604   PMID:21677750   PMID:21873635   PMID:22071149   PMID:22284419   PMID:23160154  
PMID:23263557   PMID:23972988   PMID:23993650   PMID:24154727   PMID:24205360   PMID:24218451   PMID:24270665   PMID:24598055   PMID:24670800   PMID:24813208   PMID:25300616   PMID:25848017  
PMID:26223655   PMID:26320659   PMID:26371324   PMID:26744331   PMID:27113764   PMID:27184854   PMID:27233670   PMID:27496731   PMID:27511730   PMID:28069950   PMID:28297665   PMID:28351661  
PMID:28598415   PMID:28835460   PMID:28963528   PMID:29706455   PMID:29734329   PMID:30566866   PMID:30872080   PMID:31826941  


Genomics

Comparative Map Data
Trex1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,887,000 - 108,888,791 (-)NCBIGRCm39mm39
GRCm39 Ensembl9108,887,001 - 108,888,802 (-)Ensembl
GRCm389109,057,932 - 109,059,723 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9109,057,933 - 109,059,734 (-)EnsemblGRCm38mm10GRCm38
MGSCv379108,960,446 - 108,962,237 (-)NCBIGRCm37mm9NCBIm37
MGSCv369108,915,338 - 108,917,129 (-)NCBImm8
Celera9108,616,714 - 108,618,505 (-)NCBICelera
Cytogenetic Map9F2NCBI
TREX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl348,465,811 - 48,467,645 (+)EnsemblGRCh38hg38GRCh38
GRCh38348,465,830 - 48,467,645 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37348,507,229 - 48,509,044 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36348,482,233 - 48,484,048 (+)NCBINCBI36hg18NCBI36
Build 34348,463,221 - 48,482,058NCBI
Celera348,458,088 - 48,459,903 (+)NCBI
Cytogenetic Map3p21.31NCBI
HuRef348,560,949 - 48,563,074 (+)NCBIHuRef
CHM1_1348,459,219 - 48,461,344 (+)NCBICHM1_1
Trex1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,706,613 - 109,707,913 (-)NCBI
Rnor_6.0 Ensembl8117,796,128 - 117,797,427 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.08117,796,127 - 117,797,427 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08117,147,872 - 117,149,172 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48114,071,508 - 114,072,509 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18114,092,776 - 114,106,801 (-)NCBI
Celera8108,998,058 - 108,999,059 (-)NCBICelera
Cytogenetic Map8q32NCBI
Trex1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955532533,877 - 535,767 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955532533,877 - 535,767 (+)NCBIChiLan1.0ChiLan1.0
TREX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1349,469,406 - 49,471,371 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl349,470,222 - 49,471,331 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0348,387,762 - 48,389,693 (+)NCBIMhudiblu_PPA_v0panPan3
TREX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2040,624,891 - 40,626,906 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12040,624,845 - 40,626,840 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Trex1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936529264,535 - 266,451 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TREX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,178,601 - 31,180,592 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,177,604 - 31,180,764 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,561,987 - 34,563,735 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TREX1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1229,869,502 - 9,871,659 (+)NCBI
Trex1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247302,431,270 - 2,433,010 (+)NCBI

Position Markers
RH131155  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389109,057,461 - 109,057,641UniSTSGRCm38
MGSCv379108,959,975 - 108,960,155UniSTSGRCm37
Celera9108,616,243 - 108,616,423UniSTS
Cytogenetic Map9F2UniSTS
AU041952  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389109,057,990 - 109,058,100UniSTSGRCm38
MGSCv379108,960,504 - 108,960,614UniSTSGRCm37
Celera9108,616,772 - 108,616,882UniSTS
Cytogenetic Map9F2UniSTS
Whitehead/MRC_RH91110.61UniSTS
UniSTS:236254  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389109,057,954 - 109,058,153UniSTSGRCm38
MGSCv379108,960,468 - 108,960,667UniSTSGRCm37
Celera9108,616,736 - 108,616,935UniSTS
Cytogenetic Map9F2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse
13515058Adip20d_madiposity 20d (mouse)9108915010118915010Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:629
Count of miRNA genes:312
Interacting mature miRNAs:341
Transcripts:ENSMUST00000061973, ENSMUST00000112053, ENSMUST00000128062
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000061973   ⟹   ENSMUSP00000050971
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9109,057,933 - 109,059,734 (-)Ensembl
RefSeq Acc Id: ENSMUST00000112053   ⟹   ENSMUSP00000107684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9109,057,938 - 109,059,251 (-)Ensembl
RefSeq Acc Id: NM_001012236   ⟹   NP_001012236
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,887,000 - 108,888,319 (-)NCBI
GRCm389109,057,932 - 109,059,251 (-)NCBI
MGSCv379108,960,446 - 108,962,237 (-)RGD
Celera9108,616,714 - 108,618,505 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_011637   ⟹   NP_035767
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399108,887,000 - 108,888,791 (-)NCBI
GRCm389109,057,932 - 109,059,723 (-)ENTREZGENE
MGSCv379108,960,446 - 108,962,237 (-)RGD
Celera9108,616,714 - 108,618,505 (-)RGD
cM Map9 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035767   ⟸   NM_011637
- UniProtKB: Q91XB0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001012236   ⟸   NM_001012236
- UniProtKB: Q91XB0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000107684   ⟸   ENSMUST00000112053
RefSeq Acc Id: ENSMUSP00000050971   ⟸   ENSMUST00000061973

Promoters
RGD ID:6845278
Promoter ID:MM_KWN:58848
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000048743,   OTTMUST00000084780,   UC009RRS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369108,961,711 - 108,963,612 (-)MPROMDB
RGD ID:8670992
Promoter ID:EPDNEW_M13507
Type:initiation region
Name:Atrip-trex1_1
Description:Mus musculus Atrip-Trex1 readthrough (Atrip-trex1), long non-codingRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13509  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389109,059,225 - 109,059,285EPDNEW
RGD ID:8670954
Promoter ID:EPDNEW_M13508
Type:initiation region
Name:Trex1_1
Description:Mus musculus three prime repair exonuclease 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389109,059,697 - 109,059,757EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1328317 AgrOrtholog
Ensembl Genes ENSMUSG00000049734 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000050971 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000107684 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000061973 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000112053 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.420.10 UniProtKB/Swiss-Prot
InterPro Exonuclease_RNaseT/DNA_pol3 UniProtKB/Swiss-Prot
  RNaseH-like_sf UniProtKB/Swiss-Prot
  RNaseH_sf UniProtKB/Swiss-Prot
KEGG Report mmu:22040 UniProtKB/Swiss-Prot
MGD MGI:1328317 ENTREZGENE
NCBI Gene 22040 ENTREZGENE
PhenoGen Trex1 PhenoGen
SMART EXOIII UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53098 UniProtKB/Swiss-Prot
UniProt Q91XB0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3TAD7 UniProtKB/Swiss-Prot
  Q9D6W2 UniProtKB/Swiss-Prot
  Q9R1B0 UniProtKB/Swiss-Prot