Arrdc4 (arrestin domain containing 4) - Rat Genome Database

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Gene: Arrdc4 (arrestin domain containing 4) Mus musculus
Analyze
Symbol: Arrdc4
Name: arrestin domain containing 4
RGD ID: 1323389
MGI Page MGI
Description: Enables ubiquitin ligase-substrate adaptor activity. Involved in extracellular vesicle biogenesis; protein transport; and protein ubiquitination. Located in extracellular vesicle and plasma membrane. Orthologous to human ARRDC4 (arrestin domain containing 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2410003C09Rik; arrestin domain-containing protein 4; AV216361
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39768,386,742 - 68,398,986 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl768,386,743 - 68,398,989 (-)EnsemblGRCm39 Ensembl
GRCm38768,736,994 - 68,749,238 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl768,736,995 - 68,749,241 (-)EnsemblGRCm38mm10GRCm38
MGSCv37775,881,880 - 75,894,124 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36768,615,124 - 68,622,716 (-)NCBIMGSCv36mm8
Celera766,193,576 - 66,206,534 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map737.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
15-acetyldeoxynivalenol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (ISO)
ampicillin  (ISO)
antimycin A  (ISO)
aristolochic acid A  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
Benzo[k]fluoranthene  (EXP)
bisphenol A  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
capsaicin  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
dibenz[a,h]anthracene  (EXP)
dibenzo[a,l]pyrene  (EXP)
dibutyl phthalate  (EXP)
diethyl maleate  (EXP)
difenoconazole  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethanol  (ISO)
fenpyroximate  (ISO)
fluoranthene  (EXP)
flusilazole  (ISO)
folic acid  (EXP)
furan  (ISO)
gentamycin  (ISO)
iron dichloride  (ISO)
lead diacetate  (EXP,ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
N(4)-hydroxycytidine  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nickel dichloride  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
paraquat  (ISO)
parathion  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
propiconazole  (ISO)
pyrimidifen  (ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
succimer  (EXP)
tebufenpyrad  (ISO)
Tesaglitazar  (ISO)
testosterone  (EXP)
tetrachloromethane  (ISO)
tetraphene  (EXP)
thifluzamide  (ISO)
trichostatin A  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vanadyl sulfate  (ISO)
vinclozolin  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16766796   PMID:19605364   PMID:21677750  
PMID:21873635   PMID:24398455   PMID:26514267   PMID:27462458   PMID:31541165   PMID:34188787   PMID:34916487   PMID:35950500   PMID:37451484  


Genomics

Comparative Map Data
Arrdc4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39768,386,742 - 68,398,986 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl768,386,743 - 68,398,989 (-)EnsemblGRCm39 Ensembl
GRCm38768,736,994 - 68,749,238 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl768,736,995 - 68,749,241 (-)EnsemblGRCm38mm10GRCm38
MGSCv37775,881,880 - 75,894,124 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36768,615,124 - 68,622,716 (-)NCBIMGSCv36mm8
Celera766,193,576 - 66,206,534 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map737.81NCBI
ARRDC4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381597,960,703 - 97,973,833 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1597,960,703 - 97,973,833 (+)EnsemblGRCh38hg38GRCh38
GRCh371598,503,933 - 98,517,063 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361596,304,947 - 96,318,064 (+)NCBINCBI36Build 36hg18NCBI36
Build 341596,304,951 - 96,318,064NCBI
Celera1574,920,256 - 74,933,391 (+)NCBICelera
Cytogenetic Map15q26.2NCBI
HuRef1574,633,884 - 74,647,021 (+)NCBIHuRef
CHM1_11598,345,926 - 98,359,059 (+)NCBICHM1_1
T2T-CHM13v2.01595,726,358 - 95,739,492 (+)NCBIT2T-CHM13v2.0
Arrdc4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81131,779,436 - 131,793,438 (-)NCBIGRCr8
mRatBN7.21122,369,355 - 122,383,351 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1122,369,360 - 122,383,290 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1130,366,117 - 130,380,105 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01137,536,216 - 137,550,204 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01130,337,167 - 130,351,155 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01129,766,097 - 129,780,076 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1129,766,100 - 129,780,356 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01130,819,069 - 130,833,129 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41123,522,706 - 123,531,698 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11123,602,320 - 123,613,916 (-)NCBI
Celera1114,557,876 - 114,566,923 (-)NCBICelera
Cytogenetic Map1q22NCBI
Arrdc4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541625,573,265 - 25,587,127 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541625,573,265 - 25,583,928 (+)NCBIChiLan1.0ChiLan1.0
ARRDC4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21687,505,885 - 87,519,147 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11591,202,496 - 91,215,647 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01576,643,796 - 76,657,525 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11595,830,793 - 95,843,939 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1595,830,793 - 95,843,939 (+)Ensemblpanpan1.1panPan2
ARRDC4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1342,650,257 - 42,663,526 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl342,652,728 - 42,664,401 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha345,351,735 - 45,364,995 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0343,060,856 - 43,074,118 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl343,060,868 - 43,074,103 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1342,584,579 - 42,597,841 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0342,816,780 - 42,830,047 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0343,037,496 - 43,050,757 (-)NCBIUU_Cfam_GSD_1.0
Arrdc4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640140,932,378 - 140,945,035 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364835,389,422 - 5,402,076 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364835,389,448 - 5,401,995 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARRDC4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl781,656,755 - 81,669,536 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1781,656,760 - 81,669,584 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2787,586,099 - 87,598,949 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARRDC4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12916,536,541 - 16,551,386 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2916,538,408 - 16,548,743 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605930,040,508 - 30,053,676 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arrdc4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247686,248,082 - 6,260,600 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Arrdc4
482 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:866
Count of miRNA genes:576
Interacting mature miRNAs:662
Transcripts:ENSMUST00000048068, ENSMUST00000118110, ENSMUST00000132396
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74524974879249748Mouse
25314302Vmm2_mvariable multisystem mineralization 2, heart (mouse)74714974874149748Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75214974886149748Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
13432171Rosd1_mrotarod saline difference 1 (mouse)75919437869004862Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
13506750Tbthq2_mtrabecular bone thickness QTL 2 (mouse)76565974877549748Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
25314306Micab7_mMicrobial abundance of Bacteroidales Porphyromonadaceae Odoribacter 7 (mouse)76675405570749713Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse

Markers in Region
AV216361  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38768,741,700 - 68,741,780UniSTSGRCm38
MGSCv37775,886,586 - 75,886,666UniSTSGRCm37
Celera766,198,283 - 66,198,363UniSTS
Cytogenetic Map7D1UniSTS
Whitehead/MRC_RH7855.11UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000048068   ⟹   ENSMUSP00000044578
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl768,386,743 - 68,398,989 (-)Ensembl
GRCm38.p6 Ensembl768,736,995 - 68,749,241 (-)Ensembl
RefSeq Acc Id: ENSMUST00000118110   ⟹   ENSMUSP00000112962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl768,391,259 - 68,398,936 (-)Ensembl
GRCm38.p6 Ensembl768,741,511 - 68,749,188 (-)Ensembl
RefSeq Acc Id: NM_001042592   ⟹   NP_001036057
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39768,386,742 - 68,398,986 (-)NCBI
GRCm38768,736,994 - 68,749,238 (-)ENTREZGENE
MGSCv37775,881,880 - 75,894,124 (-)RGD
Celera766,193,576 - 66,206,534 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_025549   ⟹   NP_079825
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39768,391,341 - 68,398,986 (-)NCBI
GRCm38768,741,593 - 68,749,238 (-)NCBI
MGSCv37775,881,880 - 75,894,124 (-)RGD
Celera766,193,576 - 66,206,534 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_001036057   ⟸   NM_001042592
- Peptide Label: isoform 1
- UniProtKB: Q8VD69 (UniProtKB/Swiss-Prot),   A0A0B4J1F4 (UniProtKB/TrEMBL),   Q0GJK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_079825   ⟸   NM_025549
- Peptide Label: isoform 2
- UniProtKB: Q9D6S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000112962   ⟸   ENSMUST00000118110
RefSeq Acc Id: ENSMUSP00000044578   ⟸   ENSMUST00000048068
Protein Domains
Arrestin C-terminal-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0B4J1F4-F1-model_v2 AlphaFold A0A0B4J1F4 1-415 view protein structure

Promoters
RGD ID:8664421
Promoter ID:EPDNEW_M10241
Type:initiation region
Name:Arrdc4_1
Description:Mus musculus arrestin domain containing 4 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38768,749,212 - 68,749,272EPDNEW
RGD ID:6840652
Promoter ID:MM_KWN:51011
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4
Transcripts:NM_025549,   OTTMUST00000072913
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36775,893,819 - 75,894,319 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913662 AgrOrtholog
Ensembl Genes ENSMUSG00000042659 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000048068 ENTREZGENE
  ENSMUST00000048068.15 UniProtKB/Swiss-Prot
  ENSMUST00000118110 ENTREZGENE
  ENSMUST00000118110.3 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.640 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Arrestin-like_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_C-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66412 UniProtKB/Swiss-Prot
MGD MGI:1913662 ENTREZGENE
NCBI Gene 66412 ENTREZGENE
PANTHER ARRESTIN DOMAIN CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARRESTIN DOMAIN-CONTAINING PROTEIN 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arrdc4 PhenoGen
SMART Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0B4J1F4 ENTREZGENE, UniProtKB/Swiss-Prot
  Q0GJK1 ENTREZGENE, UniProtKB/TrEMBL
  Q8VD69 ENTREZGENE
  Q9D6S6 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q8VD69 UniProtKB/Swiss-Prot