Ybx2 (Y box protein 2) - Rat Genome Database
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Gene: Ybx2 (Y box protein 2) Mus musculus
Analyze
Symbol: Ybx2
Name: Y box protein 2
RGD ID: 1332070
MGI Page MGI
Description: Is expressed in early conceptus; eye; gonad; and trunk somite. Orthologous to human YBX2 (Y-box binding protein 2); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: FRGY2 homolog; germ cell-specific Y-box-binding protein; MGC118270; MSY; Msy2; Y-box protein MSY2; Y-box-binding protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,826,711 - 69,832,429 (+)NCBIGRCm39mm39
GRCm39 Ensembl1169,826,622 - 69,832,431 (+)Ensembl
GRCm381169,935,805 - 69,941,604 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,935,796 - 69,941,605 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,749,401 - 69,755,101 (+)NCBIGRCm37mm9NCBIm37
MGSCv361169,752,170 - 69,757,792 (+)NCBImm8
Celera1177,461,940 - 77,489,570 (+)NCBICelera
Cytogenetic Map11B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:9780336   PMID:10076007   PMID:10349636   PMID:10772793   PMID:11023867   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11564883   PMID:11566752   PMID:12297523   PMID:12466851  
PMID:12477932   PMID:12648488   PMID:14736745   PMID:15031116   PMID:15326356   PMID:15665108   PMID:15824319   PMID:15944199   PMID:16141072   PMID:16141073   PMID:16690745   PMID:16954378  
PMID:17015433   PMID:17035640   PMID:18606161   PMID:19597149   PMID:20059953   PMID:20075394   PMID:21613634   PMID:21621532   PMID:21677750   PMID:21873635   PMID:23151479   PMID:25336347  
PMID:26646932   PMID:26773323   PMID:27929740   PMID:28378742   PMID:28970281   PMID:29087293   PMID:29329290   PMID:29688375   PMID:30295753   PMID:31598710  


Genomics

Comparative Map Data
Ybx2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,826,711 - 69,832,429 (+)NCBIGRCm39mm39
GRCm39 Ensembl1169,826,622 - 69,832,431 (+)Ensembl
GRCm381169,935,805 - 69,941,604 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,935,796 - 69,941,605 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,749,401 - 69,755,101 (+)NCBIGRCm37mm9NCBIm37
MGSCv361169,752,170 - 69,757,792 (+)NCBImm8
Celera1177,461,940 - 77,489,570 (+)NCBICelera
Cytogenetic Map11B3NCBI
YBX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl177,288,263 - 7,294,639 (-)EnsemblGRCh38hg38GRCh38
GRCh38177,288,254 - 7,294,639 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37177,191,582 - 7,197,958 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,132,295 - 7,138,600 (-)NCBINCBI36hg18NCBI36
Celera177,216,218 - 7,222,523 (-)NCBI
Cytogenetic Map17p13.1NCBI
HuRef177,082,931 - 7,089,197 (-)NCBIHuRef
CHM1_1177,200,354 - 7,206,659 (-)NCBICHM1_1
Ybx2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21054,659,719 - 54,665,371 (+)NCBI
Rnor_6.0 Ensembl1056,546,710 - 56,551,863 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01056,546,689 - 56,552,339 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01056,291,832 - 56,297,457 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,780,431 - 56,786,061 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11056,794,180 - 56,799,676 (+)NCBI
Celera1053,813,694 - 53,819,309 (+)NCBICelera
Cytogenetic Map10q24NCBI
Ybx2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,624,019 - 9,629,904 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,624,506 - 9,629,904 (+)NCBIChiLan1.0ChiLan1.0
YBX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1177,306,548 - 7,312,632 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,306,548 - 7,312,632 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0177,319,186 - 7,325,594 (-)NCBIMhudiblu_PPA_v0panPan3
YBX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl532,245,056 - 32,251,985 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1532,244,536 - 32,250,130 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ybx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936595574,264 - 579,959 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
YBX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,635,383 - 52,641,651 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,635,383 - 52,642,443 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23139,910,595 - 139,916,577 (-)NCBISscrofa10.2Sscrofa10.2susScr3
YBX2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,660,861 - 6,667,495 (-)NCBI
Ybx2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247869,909,464 - 9,915,335 (-)NCBI

Position Markers
AI505953  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,916,472 - 69,916,554UniSTSGRCm38
MGSCv371169,729,974 - 69,730,056UniSTSGRCm37
Celera1177,464,360 - 77,464,442UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map11B4UniSTS
Whitehead/MRC_RH11912.86UniSTS
Ybx2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B4UniSTS
cM Map11 UniSTS
RH126545  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381917,693,264 - 17,693,509UniSTSGRCm38
GRCm381169,916,745 - 69,916,994UniSTSGRCm38
MGSCv371917,767,754 - 17,767,999UniSTSGRCm37
MGSCv371169,730,247 - 69,730,496UniSTSGRCm37
Celera1177,464,633 - 77,464,882UniSTS
Celera1918,373,033 - 18,373,278UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map19BUniSTS
Cytogenetic Map11B3UniSTS
cM Map1915.0UniSTS
cM Map11 UniSTS
Ybx2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,940,087 - 69,941,424UniSTSGRCm38
Celera1177,488,058 - 77,489,395UniSTS
Cytogenetic Map11B4UniSTS
Ybx2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116910000072600000Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116910000072600000Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116910000072600000Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116910000072600000Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116910000072600000Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116910000072600000Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116910000072600000Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116910000072600000Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116910000072600000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1075
Count of miRNA genes:411
Interacting mature miRNAs:471
Transcripts:ENSMUST00000018698, ENSMUST00000108601, ENSMUST00000130377, ENSMUST00000148395, ENSMUST00000149194
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001347634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF073954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF073955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV661016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000018698   ⟹   ENSMUSP00000018698
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,935,796 - 69,941,605 (+)Ensembl
RefSeq Acc Id: ENSMUST00000108601   ⟹   ENSMUSP00000104242
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,936,327 - 69,941,597 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130377
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,939,847 - 69,940,662 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148395
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,940,544 - 69,941,595 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149194   ⟹   ENSMUSP00000136684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,935,914 - 69,941,576 (+)Ensembl
RefSeq Acc Id: NM_001347634   ⟹   NP_001334563
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,827,154 - 69,832,429 (+)NCBI
GRCm381169,936,328 - 69,941,603 (+)NCBI
Sequence:
RefSeq Acc Id: NM_016875   ⟹   NP_058571
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,826,725 - 69,832,429 (+)NCBI
GRCm381169,935,899 - 69,941,603 (+)NCBI
MGSCv371169,749,401 - 69,755,101 (+)RGD
Celera1177,461,940 - 77,489,570 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036156844   ⟹   XP_036012737
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,826,711 - 69,832,424 (+)NCBI
RefSeq Acc Id: XM_036156845   ⟹   XP_036012738
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,826,711 - 69,832,424 (+)NCBI
RefSeq Acc Id: XM_036156846   ⟹   XP_036012739
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,827,234 - 69,832,424 (+)NCBI
RefSeq Acc Id: XM_036156847   ⟹   XP_036012740
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,830,414 - 69,832,424 (+)NCBI
RefSeq Acc Id: XM_036156848   ⟹   XP_036012741
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,830,064 - 69,832,424 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_058571   ⟸   NM_016875
- Peptide Label: isoform 1
- UniProtKB: B2RUF0 (UniProtKB/TrEMBL),   Q3TTC8 (UniProtKB/TrEMBL),   Q497N3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001334563   ⟸   NM_001347634
- Peptide Label: isoform 2
- UniProtKB: A0A0A0MQD2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000136684   ⟸   ENSMUST00000149194
RefSeq Acc Id: ENSMUSP00000104242   ⟸   ENSMUST00000108601
RefSeq Acc Id: ENSMUSP00000018698   ⟸   ENSMUST00000018698
RefSeq Acc Id: XP_036012737   ⟸   XM_036156844
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036012738   ⟸   XM_036156845
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012739   ⟸   XM_036156846
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036012741   ⟸   XM_036156848
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036012740   ⟸   XM_036156847
- Peptide Label: isoform X4
Protein Domains
CSD

Promoters
RGD ID:6822502
Promoter ID:MM_KWN:8153
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   Kidney
Transcripts:OTTMUST00000013545,   UC007JSX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361169,752,381 - 69,754,182 (+)MPROMDB
RGD ID:8675258
Promoter ID:EPDNEW_M15659
Type:initiation region
Name:Ybx2_1
Description:Mus musculus Y box protein 2 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381169,935,826 - 69,935,886EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1096372 AgrOrtholog
Ensembl Genes ENSMUSG00000018554 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000018698 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000104242 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000136684 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018698 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000108601 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000149194 UniProtKB/TrEMBL
InterPro CSD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CSD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CSP_DNA-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NA-bd_OB-fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:53422 UniProtKB/TrEMBL
MGD MGI:1096372 ENTREZGENE
NCBI Gene 53422 ENTREZGENE
Pfam CSD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ybx2 PhenoGen
PRINTS COLDSHOCK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CSD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CSD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CSP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50249 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A0MQD2 ENTREZGENE, UniProtKB/TrEMBL
  B2RUF0 ENTREZGENE, UniProtKB/TrEMBL
  J3QNB9_MOUSE UniProtKB/TrEMBL
  Q3TTC8 ENTREZGENE, UniProtKB/TrEMBL
  Q497N3 ENTREZGENE, UniProtKB/TrEMBL
  Q9Z2C8 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q5NCW8 UniProtKB/Swiss-Prot
  Q5NCW9 UniProtKB/Swiss-Prot
  Q9Z2C7 UniProtKB/Swiss-Prot