Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)) - Rat Genome Database

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Gene: Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)) Mus musculus
Analyze
Symbol: Fau
Name: Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
RGD ID: 62231
MGI Page MGI
Description: Predicted to be a structural constituent of ribosome. Involved in antimicrobial humoral immune response mediated by antimicrobial peptide and defense response to Gram-positive bacterium. Predicted to be located in cytosolic ribosome and extracellular space. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in decidua; embryo; and uterus. Orthologous to human FAU (FAU ubiquitin like and ribosomal protein S30 fusion); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 40S ribosomal protein S30; MNSF-beta; MNSFb; MNSFbeta; monoclonal non-specific suppressor factor beta; monoclonal nonspecific suppressor factor beta; monoclonal nonspecific suppressor factor betamonoclonal nonspecific suppressor factor beta; ubiquitin-like protein FUBI
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Fau-ps1   Fau-ps2   Fau-ps3   Gm9843  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,107,977 - 6,109,554 (+)NCBIGRCm39mm39
GRCm39 Ensembl196,107,874 - 6,109,554 (+)Ensembl
GRCm38196,057,947 - 6,059,524 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl196,057,844 - 6,059,524 (+)EnsemblGRCm38mm10GRCm38
MGSCv37196,057,888 - 6,059,524 (+)NCBIGRCm37mm9NCBIm37
MGSCv36196,057,949 - 6,059,520 (+)NCBImm8
Celera195,928,748 - 5,930,387 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:7724584   PMID:7774934   PMID:8395683   PMID:8662789   PMID:9545498   PMID:9545499   PMID:10349636   PMID:10496312   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851  
PMID:11591653   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15344325   PMID:15489334   PMID:15543234   PMID:15649767   PMID:16141072   PMID:16141073   PMID:16621790  
PMID:17393421   PMID:19796172   PMID:20206555   PMID:20849826   PMID:22273981   PMID:22544055   PMID:23298187   PMID:25180634   PMID:26031240   PMID:26192119   PMID:27113764   PMID:27581120  
PMID:30196744   PMID:30710197   PMID:31339191  


Genomics

Comparative Map Data
Fau
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,107,977 - 6,109,554 (+)NCBIGRCm39mm39
GRCm39 Ensembl196,107,874 - 6,109,554 (+)Ensembl
GRCm38196,057,947 - 6,059,524 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl196,057,844 - 6,059,524 (+)EnsemblGRCm38mm10GRCm38
MGSCv37196,057,888 - 6,059,524 (+)NCBIGRCm37mm9NCBIm37
MGSCv36196,057,949 - 6,059,520 (+)NCBImm8
Celera195,928,748 - 5,930,387 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
FAU
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1165,120,630 - 65,122,177 (-)EnsemblGRCh38hg38GRCh38
GRCh381165,120,630 - 65,122,134 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371164,888,102 - 64,889,606 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,644,678 - 64,646,236 (-)NCBINCBI36hg18NCBI36
Build 341164,644,678 - 64,646,234NCBI
Celera1162,214,399 - 62,215,972 (-)NCBI
Cytogenetic Map11q13.1NCBI
HuRef1161,214,736 - 61,216,309 (-)NCBIHuRef
CHM1_11164,771,776 - 64,773,349 (-)NCBICHM1_1
Fau
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21203,350,226 - 203,351,741 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1203,350,189 - 203,351,742 (+)Ensembl
Rnor_6.01221,420,312 - 221,421,827 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,921,721 - 86,922,122 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,420,271 - 221,421,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,355,748 - 228,357,263 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,695,065 - 208,696,580 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11208,848,527 - 208,850,033 (+)NCBI
Celera1200,883,925 - 200,885,440 (+)NCBICelera
Cytogenetic Map1q43NCBI
Fau
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542220,078,393 - 20,080,855 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542220,078,393 - 20,080,855 (+)NCBIChiLan1.0ChiLan1.0
FAU
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11163,821,396 - 63,822,969 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1163,821,447 - 63,822,579 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01160,482,981 - 60,484,585 (-)NCBIMhudiblu_PPA_v0panPan3
FAU
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11852,072,705 - 52,074,337 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1852,072,796 - 52,074,336 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,680,756 - 50,682,405 (+)NCBI
ROS_Cfam_1.01853,114,764 - 53,116,413 (+)NCBI
UMICH_Zoey_3.11852,210,148 - 52,211,795 (+)NCBI
UNSW_CanFamBas_1.01851,784,114 - 51,785,763 (+)NCBI
UU_Cfam_GSD_1.01852,578,594 - 52,580,243 (+)NCBI
Fau
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,804,297 - 7,805,792 (+)NCBI
SpeTri2.0NW_0049365994,246,681 - 4,248,142 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAU
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl27,059,462 - 7,072,809 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.127,070,903 - 7,072,811 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.226,202,846 - 6,204,847 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FAU
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.119,106,708 - 9,108,284 (+)NCBI
ChlSab1.1 Ensembl19,106,252 - 9,109,304 (+)Ensembl
Vero_WHO_p1.0NW_023666038106,487,693 - 106,489,331 (+)NCBI
Fau
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476721,280,329 - 21,282,496 (+)NCBI

Position Markers
RH142169  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38196,058,525 - 6,059,425UniSTSGRCm38
GRCm381676,403,300 - 76,403,480UniSTSGRCm38
MGSCv371676,403,545 - 76,403,725UniSTSGRCm37
MGSCv37196,058,525 - 6,059,425UniSTSGRCm37
Celera1676,614,143 - 76,614,323UniSTS
Celera195,929,385 - 5,930,288UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map16C3.1UniSTS
cM Map193.0UniSTS
cM Map193.0UniSTS
RH93189  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38196,058,468 - 6,059,373UniSTSGRCm38
GRCm381676,403,352 - 76,403,537UniSTSGRCm38
MGSCv371676,403,597 - 76,403,782UniSTSGRCm37
MGSCv37196,058,468 - 6,059,373UniSTSGRCm37
Celera1676,614,195 - 76,614,380UniSTS
Celera195,929,328 - 5,930,236UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map16C3.1UniSTS
cM Map193.0UniSTS
cM Map193.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300776Lfp3_mlong free running period 3 (mouse)Not determined19120278703Mouse
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120645286Mouse
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122321310Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132362870Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132897810Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19167640035676563Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19320000035900000Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19327855120562299Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19334585237345984Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19334585237345984Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19334585237345984Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19334585237345984Mouse
25394536Skmw86_mskeletal muscle weight 86, TA (mouse)1950147898980461Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19533596239336106Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:381
Count of miRNA genes:118
Interacting mature miRNAs:127
Transcripts:ENSMUST00000043074, ENSMUST00000178310, ENSMUST00000179142
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001160239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB039084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB039092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV474170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV502224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC081463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY032057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D26610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L33715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X65922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000043074   ⟹   ENSMUSP00000042835
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,973 - 6,109,546 (+)Ensembl
GRCm38.p6 Ensembl196,057,943 - 6,059,516 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178310   ⟹   ENSMUSP00000136803
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,874 - 6,109,549 (+)Ensembl
GRCm38.p6 Ensembl196,057,844 - 6,059,519 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179142   ⟹   ENSMUSP00000136358
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,997 - 6,109,554 (+)Ensembl
GRCm38.p6 Ensembl196,057,967 - 6,059,524 (+)Ensembl
RefSeq Acc Id: ENSMUST00000236021
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,984 - 6,108,594 (+)Ensembl
GRCm38.p6 Ensembl196,057,954 - 6,058,564 (+)Ensembl
RefSeq Acc Id: ENSMUST00000236217   ⟹   ENSMUSP00000157416
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,999 - 6,109,549 (+)Ensembl
GRCm38.p6 Ensembl196,057,969 - 6,059,519 (+)Ensembl
RefSeq Acc Id: ENSMUST00000236336   ⟹   ENSMUSP00000158381
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,981 - 6,109,540 (+)Ensembl
GRCm38.p6 Ensembl196,057,951 - 6,059,510 (+)Ensembl
RefSeq Acc Id: ENSMUST00000236976
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,984 - 6,109,549 (+)Ensembl
GRCm38.p6 Ensembl196,057,954 - 6,059,519 (+)Ensembl
RefSeq Acc Id: ENSMUST00000237840   ⟹   ENSMUSP00000157878
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,108,253 - 6,109,546 (+)Ensembl
GRCm38.p6 Ensembl196,058,223 - 6,059,516 (+)Ensembl
RefSeq Acc Id: ENSMUST00000237859   ⟹   ENSMUSP00000157825
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl196,107,972 - 6,109,516 (+)Ensembl
GRCm38.p6 Ensembl196,057,942 - 6,059,486 (+)Ensembl
RefSeq Acc Id: NM_001160239   ⟹   NP_001153711
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39196,107,977 - 6,109,554 (+)NCBI
GRCm38196,057,947 - 6,059,524 (+)NCBI
MGSCv37196,057,888 - 6,059,524 (+)RGD
Celera195,928,748 - 5,930,387 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190436   ⟹   NP_001177365
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39196,107,977 - 6,109,554 (+)NCBI
GRCm38196,057,947 - 6,059,524 (+)NCBI
MGSCv37196,057,888 - 6,059,524 (+)RGD
Celera195,928,748 - 5,930,387 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_007990   ⟹   NP_032016
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39196,107,977 - 6,109,554 (+)NCBI
GRCm38196,057,947 - 6,059,524 (+)NCBI
MGSCv37196,057,888 - 6,059,524 (+)RGD
Celera195,928,748 - 5,930,387 (+)RGD
cM Map19 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001153711 (Get FASTA)   NCBI Sequence Viewer  
  NP_001177365 (Get FASTA)   NCBI Sequence Viewer  
  NP_032016 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA91564 (Get FASTA)   NCBI Sequence Viewer  
  AAH58691 (Get FASTA)   NCBI Sequence Viewer  
  AAH62873 (Get FASTA)   NCBI Sequence Viewer  
  AAH81463 (Get FASTA)   NCBI Sequence Viewer  
  BAA05655 (Get FASTA)   NCBI Sequence Viewer  
  BAB22034 (Get FASTA)   NCBI Sequence Viewer  
  BAB25684 (Get FASTA)   NCBI Sequence Viewer  
  BAB68608 (Get FASTA)   NCBI Sequence Viewer  
  BAB68610 (Get FASTA)   NCBI Sequence Viewer  
  BAB68611 (Get FASTA)   NCBI Sequence Viewer  
  BAB68612 (Get FASTA)   NCBI Sequence Viewer  
  BAB68613 (Get FASTA)   NCBI Sequence Viewer  
  BAB68614 (Get FASTA)   NCBI Sequence Viewer  
  BAB68615 (Get FASTA)   NCBI Sequence Viewer  
  BAB68616 (Get FASTA)   NCBI Sequence Viewer  
  BAE21333 (Get FASTA)   NCBI Sequence Viewer  
  BAE30206 (Get FASTA)   NCBI Sequence Viewer  
  BAE30423 (Get FASTA)   NCBI Sequence Viewer  
  BAE31458 (Get FASTA)   NCBI Sequence Viewer  
  BAE40285 (Get FASTA)   NCBI Sequence Viewer  
  CAA46715 (Get FASTA)   NCBI Sequence Viewer  
  EDL33198 (Get FASTA)   NCBI Sequence Viewer  
  EDL33199 (Get FASTA)   NCBI Sequence Viewer  
  P35545 (Get FASTA)   NCBI Sequence Viewer  
  P62862 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_032016   ⟸   NM_007990
- UniProtKB: P35545 (UniProtKB/Swiss-Prot),   Q642K5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153711   ⟸   NM_001160239
- UniProtKB: P35545 (UniProtKB/Swiss-Prot),   Q642K5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177365   ⟸   NM_001190436
- UniProtKB: P35545 (UniProtKB/Swiss-Prot),   Q642K5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000136803   ⟸   ENSMUST00000178310
RefSeq Acc Id: ENSMUSP00000157825   ⟸   ENSMUST00000237859
RefSeq Acc Id: ENSMUSP00000157878   ⟸   ENSMUST00000237840
RefSeq Acc Id: ENSMUSP00000158381   ⟸   ENSMUST00000236336
RefSeq Acc Id: ENSMUSP00000157416   ⟸   ENSMUST00000236217
RefSeq Acc Id: ENSMUSP00000136358   ⟸   ENSMUST00000179142
RefSeq Acc Id: ENSMUSP00000042835   ⟸   ENSMUST00000043074
Protein Domains
Ubiquitin-like

Promoters
RGD ID:6830029
Promoter ID:MM_KWN:26139
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_026246,   UC008GGR.1,   UC008GGS.1,   UC008GGT.1,   UC008GGU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36196,056,776 - 6,058,782 (+)MPROMDB
RGD ID:13678618
Promoter ID:EPDNEW_M23458
Type:initiation region
Name:Fau_1
Description:Mus musculus Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV)ubiquitously expressed , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38196,057,951 - 6,058,011EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:102547 AgrOrtholog
Ensembl Genes ENSMUSG00000038274 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000042835 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000136358 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000136803 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000157416 UniProtKB/TrEMBL
  ENSMUSP00000157825 UniProtKB/TrEMBL
  ENSMUSP00000157878 UniProtKB/TrEMBL
  ENSMUSP00000158381 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000043074 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000178310 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000179142 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000236217 UniProtKB/TrEMBL
  ENSMUST00000236336 UniProtKB/TrEMBL
  ENSMUST00000237840 UniProtKB/TrEMBL
  ENSMUST00000237859 UniProtKB/TrEMBL
InterPro FUBI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_S30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin UniProtKB/Swiss-Prot
  Ubiquitin-like_dom UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin_dom UniProtKB/Swiss-Prot
  Ubiquitin_dom UniProtKB/TrEMBL
KEGG Report mmu:14109 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:102547 ENTREZGENE
NCBI Gene 14109 ENTREZGENE
Pfam Ribosomal_S30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ubiquitin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fau PhenoGen
PRINTS UBIQUITIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE UBIQUITIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBIQUITIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART UBQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A494B9Z0_MOUSE UniProtKB/TrEMBL
  A0A494BBA8_MOUSE UniProtKB/TrEMBL
  P35545 ENTREZGENE
  P62862 ENTREZGENE
  Q3THB2_MOUSE UniProtKB/TrEMBL
  Q642K5 ENTREZGENE, UniProtKB/TrEMBL
  Q91V99_MOUSE UniProtKB/TrEMBL
  Q920W8_MOUSE UniProtKB/TrEMBL
  RS30_MOUSE UniProtKB/Swiss-Prot
  UBIM_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q05472 UniProtKB/Swiss-Prot
  Q95261 UniProtKB/Swiss-Prot
  Q9JJ24 UniProtKB/Swiss-Prot