ONTOLOGY REPORT - ANNOTATIONS
Term: heart development
Accession: GO:0007507
browse the term
Definition: The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
Synonyms: narrow_synonym: dorsal vessel development
related_synonym: cardiac development
alt_id: GO:0007511
xref: Wikipedia:Heart_development
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
AABR07063281.1
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
G
Abcc9
ATP binding cassette subfamily C member 9
acts_upstream_of_or_within
ISO
MGI:2155916 (PMID:19675276), (PMID:24936167)
RGD
PMID:19675276 PMID:24936167
NCBI chr 4:177,262,848...177,386,837
Ensembl chr 4:175,532,547...175,655,356
G
Acadm
acyl-CoA dehydrogenase medium chain
acts_upstream_of_or_within
ISO IEA
MGI:3692446 (PMID:16121256) GO_REF:0000107
RGD Ensembl
PMID:16121256
GO_REF:0000107
NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147
G
Acan
aggrecan
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:142,390,951...142,453,779
Ensembl chr 1:132,981,582...133,043,627
G
Acvr1
activin A receptor type 1
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2136412|MGI:2386570|MGI:2651395 (PMID:15226263), (PMID:16140292), (PMID:17078885)
GO_Central Ensembl RGD
PMID:15226263 PMID:16140292 PMID:17078885
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Acvr2b
activin A receptor type 2B
acts_upstream_of_or_within
ISO IEA
MGI:108051|MGI:1857709 (PMID:17849440), (PMID:9242489) GO_REF:0000107
RGD Ensembl
PMID:9242489 PMID:17849440
GO_REF:0000107
NCBI chr 8:128,016,589...128,056,193
Ensembl chr 8:119,138,812...119,170,458
G
Acvrl1
activin A receptor like type 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:132,239,729...132,256,591
G
Adam19
ADAM metallopeptidase domain 19
acts_upstream_of_or_within
ISO
MGI:3028702|MGI:3620562 (PMID:14673146), (PMID:14975714)
RGD
PMID:14673146 PMID:14975714
NCBI chr10:30,491,362...30,583,115
Ensembl chr10:30,491,405...30,583,105
G
Adamts6
ADAM metallopeptidase with thrombospondin type 1 motif, 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
G
Adap2
ArfGAP with dual PH domains 2
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:16138909)
UniProt GO_Central RGD
PMID:16138909
GO_REF:0000024 GO_REF:0000033
NCBI chr10:65,635,891...65,665,019
Ensembl chr10:65,138,020...65,165,604
G
Adcy5
adenylate cyclase 5
IEP
RGD
PMID:19734365
RGD:13464133
NCBI chr11:78,976,861...79,123,343
Ensembl chr11:65,471,612...65,618,974
G
Adipor2
adiponectin receptor 2
IEP
RGD
PMID:15754086
RGD:1625767
NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
G
Adm
adrenomedullin
acts_upstream_of_or_within involved_in
ISO
MGI:2176598 (PMID:16537897), (PMID:16981008) (PMID:18097473)
RGD
PMID:16537897 PMID:16981008 PMID:18097473
NCBI chr 1:174,164,178...174,182,372
Ensembl chr 1:164,745,466...164,747,654
G
Agtr1a
angiotensin II receptor, type 1a
acts_upstream_of_or_within
ISO IEA
(PMID:16585392) GO_REF:0000107
RGD Ensembl
PMID:16585392
GO_REF:0000107
NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,174,429...34,226,946
G
Akap13
A-kinase anchoring protein 13
involved_in
ISS ISO
GO_REF:0000024 (PMID:20139090)
UniProt RGD
PMID:20139090
GO_REF:0000024
NCBI chr 1:138,722,445...139,029,401
Ensembl chr 1:129,314,402...129,619,646
G
Alpk3
alpha-kinase 3
acts_upstream_of_or_within
ISO IEA
(PMID:11418590) GO_REF:0000107
RGD Ensembl
PMID:11418590
GO_REF:0000107
NCBI chr 1:135,014,455...135,062,294
Ensembl chr 1:135,014,499...135,062,302
G
Ankrd11
ankyrin repeat domain containing 11
acts_upstream_of_or_within
ISO
(PMID:38951500)
RGD
PMID:38951500
NCBI chr19:67,848,836...68,007,491
Ensembl chr19:50,940,299...51,098,962
G
Anks6
ankyrin repeat and sterile alpha motif domain containing 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 5:66,104,770...66,146,186
Ensembl chr 5:61,309,183...61,350,596
G
Ap1b1
adaptor related protein complex 1 subunit beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr14:84,093,529...84,144,835
Ensembl chr14:79,879,533...79,930,778
G
Ap2b1
adaptor related protein complex 2 subunit beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:68,596,925...68,702,547
Ensembl chr10:68,099,547...68,205,013
G
Apela
apelin receptor early endogenous ligand
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465
G
Aplnr
apelin receptor
involved_in
ISS IBA
GO_REF:0000024 GO_REF:0000033
UniProt GO_Central
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Asb2
ankyrin repeat and SOCS box-containing 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:128,239,550...128,275,833
Ensembl chr 6:122,474,756...122,510,854
G
Ascl1
achaete-scute family bHLH transcription factor 1
IEP
RGD
PMID:11803116
RGD:704410
NCBI chr 7:23,790,642...23,793,509
Ensembl chr 7:21,903,126...21,905,993
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of_or_within
ISO
MGI:3840841 (PMID:19270745)
RGD
PMID:19270745
NCBI chr 6:32,090,497...32,234,487
Ensembl chr 6:26,425,954...26,507,477
G
Atf2
activating transcription factor 2
involved_in
ISO
MGI:2443472 (PMID:17699753)
RGD
PMID:17699753
NCBI chr 3:79,125,814...79,202,896
Ensembl chr 3:58,718,332...58,795,236
G
Atf7
activating transcription factor 7
involved_in
ISO
MGI:109349 (PMID:17699753)
RGD
PMID:17699753
NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
G
Atm
ATM serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:104779 (PMID:16687486)
RGD
PMID:16687486
NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437
G
Bbs7
Bardet-Biedl syndrome 7
acts_upstream_of_or_within
ISO IEA
MGI:98715 (PMID:22228099) GO_REF:0000107
RGD Ensembl
PMID:22228099
GO_REF:0000107
NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
G
Bcor
BCL6 co-repressor
involved_in
ISO IEA
(PMID:17517692) GO_REF:0000107
RGD Ensembl
PMID:17517692
GO_REF:0000107
NCBI chr X:13,282,431...13,402,254
Ensembl chr X:10,687,732...10,729,613
G
Bicc1
BicC family RNA binding protein 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr20:17,448,745...17,685,887
Ensembl chr20:17,449,560...17,686,776
G
Bmp10
bone morphogenetic protein 10
acts_upstream_of_or_within
ISO IEA
MGI:3042354 (PMID:15073151) GO_REF:0000107
RGD Ensembl
PMID:15073151
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:3583785 (PMID:16314491) (PMID:18545679)
UniProt Ensembl RGD
PMID:16314491 PMID:18545679
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO IEA
MGI:2181190|MGI:3042751 (PMID:12975322), (PMID:15070745) GO_REF:0000107
RGD Ensembl
PMID:12975322 PMID:15070745
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO IEA
MGI:2158390|MGI:2176182 (PMID:16556916) GO_REF:0000107
RGD Ensembl
PMID:16556916
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Borcs8
BLOC-1 related complex subunit 8
involved_in
ISO
(PMID:10458488)
RGD
PMID:10458488
NCBI chr16:19,274,305...19,280,969
Ensembl chr16:19,274,023...19,280,339
G
C16h10orf71
similar to human chromosome 10 open reading frame 71
acts_upstream_of_or_within
ISO
(PMID:38950288)
RGD
PMID:38950288
NCBI chr16:7,910,597...7,961,900
Ensembl chr16:7,910,433...7,961,958
G
Cacna1c
calcium voltage-gated channel subunit alpha1 C
involved_in
ISO
(PMID:15454078)
RGD
PMID:15454078
NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648
G
Cacna1d
calcium voltage-gated channel subunit alpha1 D
IEP
RGD
PMID:21378599
RGD:6906917
NCBI chr16:5,233,682...5,527,549
Ensembl chr16:5,228,306...5,668,215
G
Cacybp
calcyclin binding protein
involved_in
IEP IBA
mRNA:increased expression:heart GO_REF:0000033
GO_Central RGD
PMID:16440310
GO_REF:0000033, RGD:2326117
NCBI chr13:72,437,485...72,447,810
Ensembl chr13:72,437,490...72,450,177
G
Cad
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
IEP
RGD
PMID:14160653
RGD:2303538
NCBI chr 6:31,012,091...31,035,098
Ensembl chr 6:25,292,133...25,319,861
G
Calcrl
calcitonin receptor like receptor
acts_upstream_of_or_within
ISO IEA
(PMID:16537897) GO_REF:0000107
RGD Ensembl
PMID:16537897
GO_REF:0000107
NCBI chr 3:69,428,348...69,525,910
Ensembl chr 3:69,430,120...69,525,910
G
Casp3
caspase 3
acts_upstream_of_or_within
ISO IEA
MGI:109383 (PMID:16469926) GO_REF:0000107
RGD Ensembl
PMID:16469926
GO_REF:0000107
NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648
G
Casp7
caspase 7
acts_upstream_of_or_within
ISO IEA
MGI:107739 (PMID:16469926) GO_REF:0000107
RGD Ensembl
PMID:16469926
GO_REF:0000107
NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:255,437,172...255,476,729
G
Casp8
caspase 8
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:31748744) MGI:3609638 (PMID:12404118)
UniProt RGD
PMID:12404118 PMID:31748744
GO_REF:0000024
NCBI chr 9:67,747,109...67,806,699
Ensembl chr 9:60,264,075...60,312,542
G
Cc2d2a
coiled-coil and C2 domain containing 2A
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr14:71,563,835...71,648,352
Ensembl chr14:67,351,353...67,435,949
G
Ccdc39
coiled-coil domain 39 molecular ruler complex subunit
acts_upstream_of_or_within
ISO IEA
MGI:5316786 (PMID:25807483), (PMID:28289722) GO_REF:0000107
RGD Ensembl
PMID:25807483 PMID:28289722
GO_REF:0000107
NCBI chr 2:118,593,881...118,631,584
Ensembl chr 2:116,665,261...116,703,350
G
Ccm2
CCM2 scaffold protein
acts_upstream_of_or_within involved_in
ISO IEA IBA
MGI:1924696|MGI:3512761 (PMID:19151727) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:19151727
GO_REF:0000033 GO_REF:0000107
NCBI chr14:85,632,338...85,678,016
Ensembl chr14:81,418,236...81,464,116
G
Cdkl1
cyclin dependent kinase like 1
IEP
RGD
PMID:9620176
RGD:2316160
NCBI chr 6:88,224,154...88,273,434
Ensembl chr 6:88,224,143...88,270,276
G
Cdkn1a
cyclin-dependent kinase inhibitor 1A
involved_in
ISO
(PMID:24380855)
RGD
PMID:24380855
NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585
G
Cdkn1b
cyclin-dependent kinase inhibitor 1B
involved_in
ISO
(PMID:24380855)
RGD
PMID:24380855
NCBI chr 4:169,491,273...169,496,500
Ensembl chr 4:167,760,181...167,764,982
G
Cep290
centrosomal protein 290
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:35,310,199...35,399,392
G
Cfc1
cripto, FRL-1, cryptic family 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:44,234,997...44,247,846
Ensembl chr 9:36,739,071...36,751,930
G
Chrna3
cholinergic receptor nicotinic alpha 3 subunit
IEP
RGD
PMID:15549397
RGD:1599606
NCBI chr 8:64,297,755...64,311,251
Ensembl chr 8:55,401,702...55,415,165
G
Ciroz
ciliated left-right organizer protein containing ZP-N domains
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 5:164,358,333...164,393,758
Ensembl chr 5:159,075,343...159,105,369
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
ISO ISS
(PMID:16287139) (PMID:15750185) GO_REF:0000024
RGD UniProt
PMID:15750185 PMID:16287139
GO_REF:0000024
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Ckmt2
creatine kinase, mitochondrial 2
IEP
RGD
PMID:8086475
RGD:11565082
NCBI chr 2:23,079,918...23,110,518
Ensembl chr 2:23,079,918...23,110,430
G
Col3a1
collagen type III alpha 1 chain
involved_in
ISO
(PMID:7546986)
RGD
PMID:7546986
NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO IEA
MGI:2153356 (PMID:22343710) GO_REF:0000107
RGD Ensembl
PMID:22343710
GO_REF:0000107
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Cox17
cytochrome c oxidase copper chaperone COX17
IEP
RGD
PMID:11054125
RGD:632610
NCBI chr11:75,906,245...75,912,036
G
Cplane1
ciliogenesis and planar polarity effector complex subunit 1
acts_upstream_of_or_within
ISO
MGI:5297398 (PMID:25877302)
RGD
PMID:25877302
NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
G
Cripto
cripto, EGF-CFC family member
involved_in
ISO IBA
(PMID:9576836) GO_REF:0000033
RGD GO_Central
PMID:9576836
GO_REF:0000033
NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308
G
Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:98493 (PMID:16399080)
RGD
PMID:16399080
NCBI chr11:97,033,033...97,067,457
Ensembl chr11:83,526,530...83,563,238
G
Cs
citrate synthase
IEP
RGD
PMID:14984324
RGD:329328931
NCBI chr 7:1,348,389...1,374,624
Ensembl chr 7:758,345...791,421
G
Csrp3
cysteine and glycine rich protein 3
acts_upstream_of_or_within
ISO IEA
MGI:1328311 (PMID:28706255) GO_REF:0000107
RGD Ensembl
PMID:28706255
GO_REF:0000107
NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
G
Ctcf
CCCTC-binding factor
acts_upstream_of_or_within
ISO IEA
(PMID:28846746) GO_REF:0000107
RGD Ensembl
PMID:28846746
GO_REF:0000107
NCBI chr19:50,431,478...50,481,013
Ensembl chr19:33,529,319...33,571,123
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO IEA
MGI:2148569 (PMID:12464179) GO_REF:0000107
RGD Ensembl
PMID:12464179
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Cxadr
CXADR, Ig-like cell adhesion molecule
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:3583765|MGI:3587803|MGI:3711226 (PMID:15864812), (PMID:16079292), (PMID:16543498)
UniProt RGD
PMID:15864812 PMID:16079292 PMID:16543498
GO_REF:0000024
NCBI chr11:16,982,864...17,030,078
Ensembl chr11:16,982,860...17,030,046
G
Dag1
dystroglycan 1
acts_upstream_of_or_within
ISO IEA
MGI:2387358 (PMID:19797173) GO_REF:0000107
RGD Ensembl
PMID:19797173
GO_REF:0000107
NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:108,890,929...108,952,325
G
Daw1
dynein assembly factor with WD repeats 1
acts_upstream_of_or_within
ISO
MGI:5431501 (PMID:25807483), (PMID:28289722)
RGD
PMID:25807483 PMID:28289722
NCBI chr 9:91,883,656...91,920,733
Ensembl chr 9:84,435,552...84,472,635
G
Dnaaf3
dynein, axonemal, assembly factor 3
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:78,333,985...78,342,034
Ensembl chr 1:69,291,454...69,299,344
G
Dnaaf4
dynein axonemal assembly factor 4
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:25807483)
GO_Central Ensembl RGD
PMID:25807483
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:82,577,044...82,601,653
Ensembl chr 8:73,698,103...73,711,292
G
Dnah11
dynein, axonemal, heavy chain 11
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:144,982,130...145,298,523
Ensembl chr 6:138,839,177...139,155,536
G
Dnah5
dynein, axonemal, heavy chain 5
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 2:80,668,182...80,985,918
Ensembl chr 2:78,937,800...79,254,890
G
Dnai1
dynein, axonemal, intermediate chain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 5:61,526,079...61,596,806
Ensembl chr 5:56,730,179...56,800,925
G
Drc1
dynein regulatory complex subunit 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 6:31,744,849...31,779,996
Ensembl chr 6:26,025,005...26,059,414
G
Dvl2
dishevelled segment polarity protein 2
acts_upstream_of_or_within
ISO IEA
MGI:2429760 (PMID:12421720), (PMID:12464179) GO_REF:0000107
RGD Ensembl
PMID:12421720 PMID:12464179
GO_REF:0000107
NCBI chr10:55,222,245...55,231,506
Ensembl chr10:54,723,411...54,732,820
G
Dync2h1
dynein cytoplasmic 2 heavy chain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 8:12,473,955...12,697,075
Ensembl chr 8:4,189,257...4,412,183
G
Dzip1
DAZ interacting zinc finger protein 1
involved_in
ISO IEA
(PMID:31118289) GO_REF:0000107
RGD Ensembl
PMID:31118289
GO_REF:0000107
NCBI chr15:102,363,392...102,417,085
Ensembl chr15:95,956,398...96,010,066
G
Ece1
endothelin converting enzyme 1
involved_in
ISO IEA
(PMID:9915973) GO_REF:0000107
RGD Ensembl
PMID:9915973
GO_REF:0000107
NCBI chr 5:155,361,031...155,462,723
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857637 (PMID:7615798) GO_REF:0000107 MGI:1857473 (PMID:24875861)
RGD Ensembl
PMID:7615798 PMID:24875861
GO_REF:0000107
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1347481 (PMID:15664398) GO_REF:0000107 MGI:1857473|MGI:2687362 (PMID:24875861), (PMID:25197047)
RGD Ensembl
PMID:15664398 PMID:24875861 PMID:25197047
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Eif4g2
eukaryotic translation initiation factor 4, gamma 2
IEP
RGD
PMID:10471355
RGD:70273
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
G
Eng
endoglin
acts_upstream_of_or_within
ISO
MGI:2177822|MGI:2177824 (PMID:10562296), (PMID:10625534)
RGD
PMID:10562296 PMID:10625534
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:3785162 (PMID:26624227)
RGD
PMID:26624227
NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715
G
Ep300
E1A binding protein p300
acts_upstream_of_or_within
ISO
MGI:2679374 (PMID:14517255)
RGD
PMID:14517255
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Epas1
endothelial PAS domain protein 1
IEP
RGD
PMID:9398602
RGD:625724
NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228
G
Epor
erythropoietin receptor
acts_upstream_of_or_within
ISO IEA
MGI:1857575 (PMID:11807041) GO_REF:0000107
RGD Ensembl
PMID:11807041
GO_REF:0000107
NCBI chr 8:20,489,678...20,494,257
Ensembl chr 8:20,489,678...20,494,257
G
Erbb2
erb-b2 receptor tyrosine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:1928827|MGI:2177255 (PMID:12072561), (PMID:9362461) GO_REF:0000107
RGD Ensembl
PMID:9362461 PMID:12072561
GO_REF:0000107
NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:1929607 (PMID:7477376)
UniProt Ensembl RGD
PMID:7477376
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:69,531,481...70,596,595
G
Eva1a
eva-1 homolog A, regulator of programmed cell death
acts_upstream_of_or_within
ISO
(PMID:28151473)
RGD
PMID:28151473
NCBI chr 4:114,593,773...114,643,011
Ensembl chr 4:114,593,341...114,643,011
G
Fbn1
fibrillin 1
involved_in
ISO IEA
(PMID:15781745) GO_REF:0000107
RGD Ensembl
PMID:15781745
GO_REF:0000107
NCBI chr 3:133,007,693...133,204,277
Ensembl chr 3:112,554,925...112,750,889
G
Fgf19
fibroblast growth factor 19
acts_upstream_of_or_within
ISO IEA
MGI:3044957 (PMID:15789410) GO_REF:0000107
RGD Ensembl
PMID:15789410
GO_REF:0000107
NCBI chr 1:209,485,813...209,490,267
Ensembl chr 1:200,056,644...200,060,287
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO IEA
MGI:2654594|MGI:2686864|MGI:3639735 (PMID:16720879), (PMID:16720880) GO_REF:0000107
RGD Ensembl
PMID:16720879 PMID:16720880
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Fkrp
fukutin related protein
acts_upstream_of_or_within
ISO
MGI:4834518 (PMID:27711214), (PMID:28663375), (PMID:29571322), (PMID:30150693)
RGD
PMID:27711214 PMID:28663375 PMID:29571322 PMID:30150693
NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
G
Flrt3
fibronectin leucine rich transmembrane protein 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:18448090)
UniProt Ensembl RGD
PMID:18448090
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
G
Fn1
fibronectin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:73,196,044...73,264,678
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO IEA
(PMID:10474162) GO_REF:0000107 MGI:1347481|MGI:1857869 (PMID:10479458), (PMID:16839542)
RGD Ensembl
PMID:10474162 PMID:10479458 PMID:16839542
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
involved_in acts_upstream_of_or_within
ISO
(PMID:21457232) MGI:105923|MGI:1347466|MGI:1857865 (PMID:10479458), (PMID:15664398), (PMID:16839542)
RGD
PMID:10479458 PMID:15664398 PMID:16839542 PMID:21457232
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
G
Foxf1
forkhead box F1
involved_in
ISO IEA
(PMID:19500772) GO_REF:0000107
RGD Ensembl
PMID:19500772
GO_REF:0000107
NCBI chr19:66,062,635...66,066,427
Ensembl chr19:49,153,699...49,157,738
G
Foxj1
forkhead box J1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:102,065,163...102,069,945
Ensembl chr10:101,566,304...101,570,237
G
Foxl1
forkhead box L1
involved_in
ISO
(PMID:21457232)
RGD
PMID:21457232
NCBI chr19:49,197,269...49,200,682
Ensembl chr19:49,197,400...49,198,425
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:3056542 (PMID:15342473)
RGD
PMID:15342473
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:3055161 (PMID:15361625)
RGD
PMID:15361625
NCBI chr 9:20,556,270...20,612,967
Ensembl chr 9:13,058,476...13,114,879
G
Frem2
FRAS1 related extracellular matrix 2
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 2:139,753,055...139,891,046
Ensembl chr 2:137,602,784...137,740,785
G
Fto
FTO, alpha-ketoglutarate dependent dioxygenase
IEP
RGD
PMID:36426889
RGD:329951015
NCBI chr19:31,456,749...31,865,011
Ensembl chr19:15,349,696...15,692,083
G
Gab1
GRB2-associated binding protein 1
acts_upstream_of_or_within
ISO
MGI:1926435 (PMID:10779359)
RGD
PMID:10779359
NCBI chr19:44,035,693...44,143,617
Ensembl chr19:27,131,262...27,239,236
G
Gata4
GATA binding protein 4
involved_in acts_upstream_of_or_within
TAS IEA ISO
GO_REF:0000117 MGI:2386764|MGI:3526853|MGI:3526854|MGI:3526856 (PMID:11297508), (PMID:15464586)
UniProt RGD
PMID:11297508 PMID:15464586 PMID:11994297
GO_REF:0000117, RGD:727369
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gata5
GATA binding protein 5
involved_in
ISO IEA
(PMID:21633169) GO_REF:0000107 GO_REF:0000117
RGD Ensembl UniProt
PMID:21633169
GO_REF:0000107 GO_REF:0000117
NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
G
Gata6
GATA binding protein 6
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Gja1
gap junction protein, alpha 1
involved_in acts_upstream_of_or_within
IEP ISO IBA IEA
(PMID:7892609) MGI:2176205|MGI:3051881 (PMID:16624854) GO_REF:0000033 GO_REF:0000002
RGD GO_Central InterPro
PMID:7892609 PMID:16624854 PMID:8944820
GO_REF:0000002 GO_REF:0000033, RGD:7207856
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Gja5
gap junction protein, alpha 5
involved_in
IEP IBA
GO_REF:0000033
GO_Central RGD
PMID:8944820
GO_REF:0000033, RGD:7207856
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Gja6
gap junction protein, alpha 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:33,840,689...33,845,585
Ensembl chr X:33,840,549...33,845,614
G
Gjc1
gap junction protein, gamma 1
acts_upstream_of_or_within
ISO
MGI:2177600|MGI:3608701 (PMID:14681043)
RGD
PMID:14681043
NCBI chr10:88,262,840...88,285,646
Ensembl chr10:87,760,528...87,785,867
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:11172440)
RGD
PMID:11172440
NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO IEA
MGI:95728 (PMID:11172440) GO_REF:0000107
RGD Ensembl
PMID:11172440
GO_REF:0000107
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
G
Gna11
G protein subunit alpha 11
acts_upstream_of_or_within
ISO IEA
MGI:2151589 (PMID:9687499) GO_REF:0000107
RGD Ensembl
PMID:9687499
GO_REF:0000107
NCBI chr 7:8,814,285...8,828,628
Ensembl chr 7:8,162,750...8,179,812
G
Gnaq
G protein subunit alpha q
acts_upstream_of_or_within
ISO
MGI:2151661 (PMID:9687499)
RGD
PMID:9687499
NCBI chr 1:222,852,453...223,098,754
Ensembl chr 1:213,424,465...213,667,672
G
Grk2
G protein-coupled receptor kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2180127 (PMID:8917529) GO_REF:0000107
RGD Ensembl
PMID:8917529
GO_REF:0000107
NCBI chr 1:211,010,259...211,031,013
Ensembl chr 1:201,581,480...201,601,582
G
Gys1
glycogen synthase 1
acts_upstream_of_or_within
ISO IEA
MGI:3052742 (PMID:15282316) GO_REF:0000107
RGD Ensembl
PMID:15282316
GO_REF:0000107
NCBI chr 1:105,051,916...105,071,763
Ensembl chr 1:95,915,443...95,935,292
G
Hand1
heart and neural crest derivatives expressed 1
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:103580|MGI:2153824|MGI:2386742|MGI:3514024|MGI:3514028 (PMID:15576406), (PMID:9500550)
GO_Central Ensembl RGD
PMID:9500550 PMID:15576406
GO_REF:0000033 GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
IEP IEA ISO IBA
PMID:15486975 GO_REF:0000107 MGI:103577 (PMID:15576406) GO_REF:0000033
Ensembl RGD GO_Central
PMID:15576406 PMID:15486975
GO_REF:0000033 GO_REF:0000107, RGD:8554739
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Hdac5
histone deacetylase 5
acts_upstream_of_or_within
ISO
MGI:1931221 (PMID:15367668)
RGD
PMID:15367668
NCBI chr10:87,653,139...87,688,078
Ensembl chr10:87,152,978...87,188,235
G
Hdac9
histone deacetylase 9
acts_upstream_of_or_within
ISO
MGI:1333784 (PMID:15367668)
RGD
PMID:15367668
NCBI chr 6:56,489,472...57,351,654
Ensembl chr 6:50,763,590...51,625,333
G
Heg1
heart development protein with EGF-like domains 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2384924|MGI:3838392 (PMID:19151727)
GO_Central RGD
PMID:19151727
GO_REF:0000033
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
G
Hexim1
HEXIM P-TEFb complex subunit 1
acts_upstream_of_or_within
ISO
MGI:3052225 (PMID:15172687)
RGD
PMID:15172687
NCBI chr10:88,062,808...88,064,920
Ensembl chr10:88,062,803...88,066,189
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
IEP
RGD
PMID:10692439
RGD:5132871
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Hif1a
hypoxia inducible factor 1 subunit alpha
IEP
RGD
PMID:9398602
RGD:625724
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261
G
Hmga1
high mobility group AT-hook 1
acts_upstream_of_or_within
ISO
MGI:3621126 (PMID:24728959), (PMID:32123163)
RGD
PMID:24728959 PMID:32123163
NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,611,694...5,618,752
G
Hopx
HOP homeobox
acts_upstream_of_or_within
ISO IEA
MGI:2389233|MGI:2389236|MGI:2389244 (PMID:12297045), (PMID:12297046) GO_REF:0000107
RGD Ensembl
PMID:12297045 PMID:12297046
GO_REF:0000107
NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909
G
Hspb7
heat shock protein family B (small) member 7
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:153,727,782...153,731,268
Ensembl chr 5:153,727,588...153,731,266
G
Htr2b
5-hydroxytryptamine receptor 2B
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1888735 (PMID:10944220) GO_REF:0000107 GO_REF:0000002
RGD Ensembl InterPro
PMID:10944220
GO_REF:0000002 GO_REF:0000107
NCBI chr 9:94,184,442...94,206,851
Ensembl chr 9:86,742,102...86,755,108
G
Id1
inhibitor of DNA binding 1
acts_upstream_of_or_within
ISO IEA
MGI:96397|MGI:96398 (PMID:15472070) GO_REF:0000107
RGD Ensembl
PMID:15472070
GO_REF:0000107
NCBI chr 3:161,671,525...161,672,691
Ensembl chr 3:141,211,267...141,212,419
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:96396|MGI:96398 (PMID:15472070)
RGD
PMID:15472070
NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
G
Id3
inhibitor of DNA binding 3
acts_upstream_of_or_within
ISO
MGI:96396|MGI:96397 (PMID:15472070)
RGD
PMID:15472070
NCBI chr 5:153,656,253...153,657,860
Ensembl chr 5:148,372,762...148,374,349
G
Ifitm1
interferon induced transmembrane protein 1
IEP
RGD
PMID:22021094
RGD:7495752
NCBI chr 1:205,496,757...205,498,796
Ensembl chr 1:196,067,963...196,069,169
G
Ifitm2
interferon induced transmembrane protein 2
IEP
RGD
PMID:22021094
RGD:7495752
NCBI chr 1:205,481,168...205,482,348
Ensembl chr 1:196,051,537...196,052,741
G
Ifitm3
interferon induced transmembrane protein 3
IEP
RGD
PMID:22021094
RGD:7495752
NCBI chr 1:205,540,649...205,541,758
Ensembl chr 1:196,111,043...196,112,203
G
Ift140
intraflagellar transport 140
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:14,537,134...14,624,926
Ensembl chr10:14,032,648...14,120,433
G
Ift172
intraflagellar transport 172
acts_upstream_of_or_within
ISO IEA
MGI:4821824 (PMID:21653639) GO_REF:0000107
RGD Ensembl
PMID:21653639
GO_REF:0000107
NCBI chr 6:30,801,841...30,841,239
Ensembl chr 6:25,081,980...25,120,860
G
Ift25
intraflagellar transport 25
acts_upstream_of_or_within
ISO
MGI:4432759|MGI:5426875 (PMID:22595669)
RGD
PMID:22595669
NCBI chr 5:127,264,450...127,291,225
Ensembl chr 5:122,035,581...122,062,421
G
Ift74
intraflagellar transport 74
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 5:114,576,106...114,679,581
Ensembl chr 5:109,474,255...109,563,833
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:1918742 (PMID:22228099)
RGD
PMID:22228099
NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147
G
Il1a
interleukin 1 alpha
IEP
RGD
PMID:1297459
RGD:7794762
NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:116,526,604...116,536,822
G
Irx4
iroquois homeobox 4
acts_upstream_of_or_within
ISO IEA
MGI:2180895 (PMID:11238910) GO_REF:0000107
RGD Ensembl
PMID:11238910
GO_REF:0000107
NCBI chr 1:31,859,101...31,868,089
Ensembl chr 1:30,030,561...30,039,549
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2182246 (PMID:14667410)
UniProt Ensembl RGD
PMID:14667410
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Itga3
integrin subunit alpha 3
IEP
RGD
PMID:1835909
RGD:2325829
NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
G
Itga4
integrin subunit alpha 4
acts_upstream_of_or_within
ISO
MGI:1857206|MGI:2180843 (PMID:12021259), (PMID:7539359)
RGD
PMID:7539359 PMID:12021259
NCBI chr 3:84,569,487...84,646,276
Ensembl chr 3:64,163,085...64,233,715
G
Jmjd6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
acts_upstream_of_or_within
ISO IEA
MGI:3580706 (PMID:15615595) GO_REF:0000107
RGD Ensembl
PMID:15615595
GO_REF:0000107
NCBI chr10:102,539,935...102,545,986
Ensembl chr10:102,041,120...102,047,182
G
Kcnab1
potassium voltage-gated channel subfamily A regulatory beta subunit 1
IEP
RGD
PMID:12652645
RGD:9743957
NCBI chr 2:151,446,975...151,913,636
Ensembl chr 2:149,137,041...149,603,534
G
Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO IEA
MGI:3720053 (PMID:18026101) GO_REF:0000107
RGD Ensembl
PMID:18026101
GO_REF:0000107
NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603
G
Kcnq1
potassium voltage-gated channel subfamily Q member 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:15498462)
Ensembl RGD
PMID:15498462
GO_REF:0000107
NCBI chr 1:207,721,134...208,054,073
Ensembl chr 1:198,291,766...198,624,669
G
Kctd10
potassium channel tetramerization domain containing 10
acts_upstream_of_or_within
ISO
MGI:5751542 (PMID:25401743)
RGD
PMID:25401743
NCBI chr12:42,230,159...42,248,792
Ensembl chr12:42,230,269...42,248,783
G
Kdm6a
lysine demethylase 6A
acts_upstream_of_or_within involved_in
ISO IEA IBA
MGI:5448825 (PMID:22949634) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:22949634
GO_REF:0000033 GO_REF:0000107
NCBI chr X:6,920,374...7,060,027
Ensembl chr X:4,337,750...4,477,062
G
Kdm6b
lysine demethylase 6B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:54,619,520...54,641,014
Ensembl chr10:54,121,848...54,130,794
G
Kif3a
kinesin family member 3a
acts_upstream_of_or_within
ISO
MGI:2386464 (PMID:18729223)
RGD
PMID:18729223
NCBI chr10:38,226,388...38,263,062
Ensembl chr10:37,725,970...37,759,191
G
Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO IEA
MGI:1856965 (PMID:21628317) GO_REF:0000107
RGD Ensembl
PMID:21628317
GO_REF:0000107
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
G
Lcn10
lipocalin 10
acts_upstream_of_or_within
ISO IEA
(PMID:35757735) GO_REF:0000107
RGD Ensembl
PMID:35757735
GO_REF:0000107
NCBI chr 3:8,490,781...8,494,334
Ensembl chr 3:8,490,781...8,494,333
G
Ldb3
LIM domain binding 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:9,862,161...9,926,338
Ensembl chr16:9,855,927...9,918,532
G
Lox
lysyl oxidase
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr18:48,162,889...48,175,640
Ensembl chr18:45,967,343...46,041,477
G
Lrp2
LDL receptor related protein 2
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (PMID:19705442)
RGD
PMID:19705442
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
G
Lrrc25
leucine rich repeat containing 25
acts_upstream_of_or_within
ISO
(PMID:30340835)
RGD
PMID:30340835
NCBI chr16:18,806,888...18,813,723
Ensembl chr16:18,806,890...18,813,671
G
Map2k1
mitogen activated protein kinase kinase 1
acts_upstream_of_or_within
ISO IEA
MGI:1346867 (PMID:18952847) GO_REF:0000107
RGD Ensembl
PMID:18952847
GO_REF:0000107
NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:1346866 (PMID:18952847) GO_REF:0000107
RGD Ensembl
PMID:18952847
GO_REF:0000107
NCBI chr 7:9,241,449...9,264,216
Ensembl chr 7:8,580,905...8,610,243
G
Map2k3
mitogen activated protein kinase kinase 3
IEP
RGD
PMID:9779826
RGD:70317
NCBI chr10:46,107,639...46,128,986
Ensembl chr10:45,607,163...45,629,492
G
Map2k5
mitogen activated protein kinase kinase 5
acts_upstream_of_or_within
ISO IEA
MGI:3526901 (PMID:15601854) GO_REF:0000107
RGD Ensembl
PMID:15601854
GO_REF:0000107
NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983
G
Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO IEA
(PMID:18952847) GO_REF:0000107
RGD Ensembl
PMID:18952847
GO_REF:0000107
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
G
Mb
myoglobin
acts_upstream_of_or_within
ISO IEA
MGI:2159349 (PMID:11304494) GO_REF:0000107
RGD Ensembl
PMID:11304494
GO_REF:0000107
NCBI chr 7:108,759,903...108,767,134
Ensembl chr 7:108,759,904...108,767,383
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934|MGI:2385439|MGI:98834 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Med1
mediator complex subunit 1
acts_upstream_of_or_within
ISO IEA
MGI:1861125 (PMID:10882104) GO_REF:0000107
RGD Ensembl
PMID:10882104
GO_REF:0000107
NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299
G
Med12
mediator complex subunit 12
acts_upstream_of_or_within
ISO IEA
MGI:4839484 (PMID:20630950) GO_REF:0000107
RGD Ensembl
PMID:20630950
GO_REF:0000107
NCBI chr X:70,444,615...70,467,780
Ensembl chr X:66,404,760...66,428,387
G
Mef2a
myocyte enhancer factor 2a
involved_in
ISO IEA
(PMID:10458488) GO_REF:0000107 GO_REF:0000117
RGD Ensembl UniProt
PMID:10458488
GO_REF:0000107 GO_REF:0000117
NCBI chr 1:120,847,874...120,982,488
Ensembl chr 1:120,850,080...120,981,948
G
Mef2b
myocyte enhancer factor 2B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:19,253,008...19,269,514
Ensembl chr16:19,253,010...19,268,967
G
Mef2c
myocyte enhancer factor 2C
involved_in acts_upstream_of_or_within
IEP IBA IEA ISO
PMID:15486975 GO_REF:0000033 GO_REF:0000117 MGI:1857491 (PMID:10395786), (PMID:9778514) (PMID:10458488)
GO_Central UniProt RGD
PMID:9778514 PMID:10395786 PMID:10458488 PMID:15486975
GO_REF:0000033 GO_REF:0000117, RGD:8554739
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Megf8
multiple EGF-like-domains 8
acts_upstream_of_or_within
ISO IEA
MGI:2447670 (PMID:32203821), (PMID:32966817) GO_REF:0000107
RGD Ensembl
PMID:32203821 PMID:32966817
GO_REF:0000107
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613
G
Mgrn1
mahogunin ring finger 1
acts_upstream_of_or_within
ISO
MGI:2446294 (PMID:32966817)
RGD
PMID:32966817
NCBI chr10:11,142,626...11,194,773
Ensembl chr10:10,638,880...10,688,315
G
Mib1
MIB E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO IEA
MGI:3603514 (PMID:16000382) GO_REF:0000107
RGD Ensembl
PMID:16000382
GO_REF:0000107
NCBI chr18:2,075,309...2,199,774
Ensembl chr18:1,802,519...1,920,689
G
Mical2
microtubule associated monooxygenase, calponin and LIM domain containing 2
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 1:175,780,441...175,965,157
Ensembl chr 1:166,345,859...166,471,719 Ensembl chr 1:166,345,859...166,471,719
G
Mixl1
Mix paired-like homeobox 1
acts_upstream_of_or_within
ISO IEA
MGI:2387828 (PMID:12117810) GO_REF:0000107
RGD Ensembl
PMID:12117810
GO_REF:0000107
NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065
G
Mmp13
matrix metallopeptidase 13
IDA
RGD
PMID:12061388
RGD:10043157
NCBI chr 8:12,782,829...12,793,108
Ensembl chr 8:4,497,960...4,508,239
G
Mmp2
matrix metallopeptidase 2
IDA
RGD
PMID:12061388
RGD:10043157
NCBI chr19:30,327,643...30,355,856
Ensembl chr19:14,154,657...14,182,870
G
Mmp9
matrix metallopeptidase 9
IDA
RGD
PMID:12061388
RGD:10043157
NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:153,683,858...153,692,120
G
Mosmo
modulator of smoothened
acts_upstream_of_or_within
ISO IEA
(PMID:34486668) GO_REF:0000107
RGD Ensembl
PMID:34486668
GO_REF:0000107
NCBI chr 1:184,648,985...184,719,820
Ensembl chr 1:175,217,545...175,288,334
G
Mospd3
motile sperm domain containing 3
acts_upstream_of_or_within
ISO IEA
MGI:3510668 (PMID:15464766) GO_REF:0000107
RGD Ensembl
PMID:15464766
GO_REF:0000107
NCBI chr12:24,728,012...24,737,078
Ensembl chr12:19,095,242...19,099,477
G
Mre11
MRE11 homolog, double strand break repair nuclease
IEP
RGD
PMID:10908350
RGD:68816
NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
G
Mrtfb
myocardin related transcription factor B
acts_upstream_of_or_within
ISO
MGI:3608959 (PMID:16204380)
RGD
PMID:16204380
NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (PMID:17601530), (PMID:18667074)
RGD
PMID:17601530 PMID:18667074
NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966
G
Msx2
msh homeobox 2
acts_upstream_of_or_within
ISO
MGI:97168 (PMID:18667074)
RGD
PMID:18667074
NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879
G
Mterf4
mitochondrial transcription termination factor 4
acts_upstream_of_or_within
ISO IEA
MGI:5288506 (PMID:21531335) GO_REF:0000107
RGD Ensembl
PMID:21531335
GO_REF:0000107
NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864
G
Mthfd1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
involved_in
ISO
(PMID:23704330)
RGD
PMID:23704330
NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Myl2
myosin light chain 2
involved_in acts_upstream_of_or_within
ISS ISO IBA
GO_REF:0000024 (PMID:10409661) GO_REF:0000033 MGI:2385922 (PMID:9422794)
UniProt RGD GO_Central
PMID:9422794 PMID:10409661
GO_REF:0000024 GO_REF:0000033
NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
G
Myocd
myocardin
acts_upstream_of_or_within involved_in
ISO
(PMID:11439182) (PMID:24068960)
RGD
PMID:11439182 PMID:24068960
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO IEA
MGI:1934018 (PMID:26147524) GO_REF:0000107
RGD Ensembl
PMID:26147524
GO_REF:0000107
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
G
Nat8f5
N-acetyltransferase 8 (GCN5-related) family member 5
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 4:119,817,788...119,842,503
Ensembl chr 4:118,260,252...118,285,704
G
Ncoa6
nuclear receptor coactivator 6
acts_upstream_of_or_within
ISO
MGI:2445463|MGI:2450859 (PMID:12368298), (PMID:12556486)
RGD
PMID:12368298 PMID:12556486
NCBI chr 3:164,351,062...164,422,079
Ensembl chr 3:143,890,896...143,952,268
G
Ndst1
N-deacetylase and N-sulfotransferase 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
G
Nek8
NIMA-related kinase 8
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:63,558,940...63,570,954
Ensembl chr10:63,061,253...63,072,416
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:1857444|MGI:1857478|MGI:2176057|MGI:2450311 (PMID:10419687), (PMID:12469121), (PMID:16906226), (PMID:7920653), (PMID:7926784)
HGNC-UCL Ensembl RGD
PMID:7920653 PMID:7926784 PMID:10419687 PMID:12469121 PMID:16906226
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (PMID:15339668)
RGD
PMID:15339668
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Nfatc3
nuclear factor of activated T-cells 3
acts_upstream_of_or_within
ISO
MGI:1920431 (PMID:12750314), (PMID:17229811)
RGD
PMID:12750314 PMID:17229811
NCBI chr19:50,870,464...50,944,992
Ensembl chr19:33,960,852...34,035,150
G
Nfatc4
nuclear factor of activated T-cells 4
acts_upstream_of_or_within
ISO
MGI:103296 (PMID:12750314), (PMID:17229811)
RGD
PMID:12750314 PMID:17229811
NCBI chr15:33,256,912...33,284,522
Ensembl chr15:29,305,535...29,314,610
G
Nipbl
NIPBL, cohesin loading factor
acts_upstream_of_or_within
ISO IEA
MGI:4332250 (PMID:19763162) GO_REF:0000107
RGD Ensembl
PMID:19763162
GO_REF:0000107
NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857618|MGI:97351 (PMID:10021345), (PMID:11390666), (PMID:15085192) GO_REF:0000107 (PMID:16510504)
RGD Ensembl
PMID:10021345 PMID:11390666 PMID:15085192 PMID:16510504
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nkx2-6
NK2 homeobox 6
acts_upstream_of_or_within
ISO
MGI:97350 (PMID:11390666)
RGD
PMID:11390666
NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
G
Nkx3-1
NK3 homeobox 1
involved_in
ISO
(PMID:9621431)
RGD
PMID:9621431
NCBI chr15:50,883,661...50,886,253
Ensembl chr15:44,473,851...44,476,441
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO IEA
MGI:2158732 (PMID:11311163) GO_REF:0000107
RGD Ensembl
PMID:11311163
GO_REF:0000107
NCBI chr20:29,911,258...29,919,659
Ensembl chr20:29,368,436...29,376,837
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21457232) GO_REF:0000107
RGD Ensembl
PMID:21457232
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Nppa
natriuretic peptide A
involved_in
TAS
PMID:15486975
UniProt
PMID:15486975
RGD:8554739
NCBI chr 5:163,712,184...163,713,493
Ensembl chr 5:158,429,042...158,430,351
G
Nppb
natriuretic peptide B
IEP
RGD
PMID:8027030
RGD:1580142
NCBI chr 5:163,699,955...163,701,314
Ensembl chr 5:158,416,866...158,418,168
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
MGI:1928490|MGI:1928491|MGI:1928825 (PMID:7477375), (PMID:8643489), (PMID:9362461)
RGD
PMID:7477375 PMID:8643489 PMID:9362461
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
ISO IEA
MGI:1100492 (PMID:12852851) GO_REF:0000107
RGD Ensembl
PMID:12852851
GO_REF:0000107
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
acts_upstream_of_or_within
ISO IEA
MGI:106206 (PMID:12852851) GO_REF:0000107
RGD Ensembl
PMID:12852851
GO_REF:0000107
NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958
G
Ntrk3
neurotrophic receptor tyrosine kinase 3
involved_in
ISO IEA ISS
(PMID:25196463) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25196463
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286
G
Odad2
outer dynein arm docking complex subunit 2
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr17:59,910,665...60,104,929
Ensembl chr17:55,218,991...55,409,399
G
Odad3
outer dynein arm docking complex subunit 3
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:28,796,909...28,810,587
Ensembl chr 8:20,520,898...20,534,499
G
Odad4
outer dynein arm docking complex subunit 4
acts_upstream_of_or_within
ISO IEA
MGI:6110171 (PMID:27486780) GO_REF:0000107
RGD Ensembl
PMID:27486780
GO_REF:0000107
NCBI chr10:85,980,440...86,008,943
Ensembl chr10:85,480,094...85,508,603
G
Osr1
odd-skipped related transcription factor 1
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:16223478), (PMID:16790474) MGI:3613748 (PMID:16223478)
UniProt Ensembl RGD
PMID:16223478 PMID:16790474
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO IEA
MGI:3522498 (PMID:16423343) GO_REF:0000107
RGD Ensembl
PMID:16423343
GO_REF:0000107
NCBI chr 3:152,130,767...152,160,487
Ensembl chr 3:131,677,391...131,708,359
G
Oxct1
3-oxoacid CoA transferase 1
IEP
RGD
PMID:5166591
RGD:2326169
NCBI chr 2:53,236,370...53,384,715
Ensembl chr 2:53,236,368...53,384,714
G
Oxt
oxytocin/neurophysin I prepropeptide
IEP
RGD
PMID:15316117
RGD:2304180
NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:117,782,650...117,783,490
G
Oxtr
oxytocin receptor
IEP
RGD
PMID:15316117
RGD:2304180
NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
G
Pam
peptidylglycine alpha-amidating monooxygenase
IEP
RGD
PMID:9441675
RGD:2302426
NCBI chr 9:97,998,581...98,271,966
Ensembl chr 9:98,122,916...98,271,965
G
Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:1856173 (PMID:10231856)
RGD
PMID:10231856
NCBI chr 9:87,015,960...87,112,531
Ensembl chr 9:79,568,634...79,664,042
G
Pbrm1
polybromo 1
acts_upstream_of_or_within
ISO
MGI:3526660 (PMID:15601824)
RGD
PMID:15601824
NCBI chr16:6,219,933...6,319,336
Ensembl chr16:6,213,300...6,311,780
G
Pcdha10
protocadherin alpha 10
acts_upstream_of_or_within
ISO
(PMID:34888534)
RGD
PMID:34888534
Ensembl chr18:28,581,225...28,846,211
G
Pcna
proliferating cell nuclear antigen
IEP
RGD
PMID:12389741
RGD:1299002
NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995
G
Pcsk5
proprotein convertase subtilisin/kexin type 5
involved_in
ISO IEA
(PMID:18519639) GO_REF:0000107
RGD Ensembl
PMID:18519639
GO_REF:0000107
NCBI chr 1:224,263,823...224,694,350
Ensembl chr 1:214,837,927...215,267,600
G
Pde2a
phosphodiesterase 2A
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
G
Pdgfb
platelet derived growth factor subunit B
involved_in
ISS ISO
GO_REF:0000024 (PMID:15084468)
UniProt RGD
PMID:15084468
GO_REF:0000024
NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984
G
Pdlim1
PDZ and LIM domain 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:248,991,818...249,040,409
Ensembl chr 1:239,042,385...239,091,076
G
Pdlim2
PDZ and LIM domain 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:51,647,195...51,659,904
Ensembl chr15:45,237,477...45,249,242
G
Pdlim3
PDZ and LIM domain 3
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2388199 (PMID:11329061) GO_REF:0000033
RGD GO_Central
PMID:11329061
GO_REF:0000033
NCBI chr16:46,352,460...46,383,680
Ensembl chr16:46,352,467...46,383,657
G
Pdlim4
PDZ and LIM domain 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:38,198,686...38,212,935
Ensembl chr10:38,198,689...38,212,938
G
Pdlim5
PDZ and LIM domain 5
involved_in
NAS IBA
PMID:10833443 GO_REF:0000033
GO_Central
PMID:10833443
GO_REF:0000033, RGD:8554583
NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
G
Pdlim7
PDZ and LIM domain 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:9,124,565...9,139,814
Ensembl chr17:9,124,649...9,139,811
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:1857846|MGI:1857880|MGI:2136268|MGI:2384494|MGI:2445428|MGI:98493 (PMID:10498698), (PMID:10499585), (PMID:10572050), (PMID:11493526), (PMID:12397115), (PMID:12464179), (PMID:16556915)
RGD
PMID:10498698 PMID:10499585 PMID:10572050 PMID:11493526 PMID:12397115 PMID:12464179 PMID:16556915 More...
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Pkd1
polycystin 1, transient receptor potential channel interacting
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:11891195) GO_REF:0000107 MGI:2152589 (PMID:11593033), (PMID:25807483)
RGD Ensembl
PMID:11593033 PMID:11891195 PMID:25807483
GO_REF:0000107
NCBI chr10:14,077,733...14,125,682
Ensembl chr10:13,573,021...13,621,128
G
Pkd1l1
polycystin 1 like 1, transient receptor potential channel interacting
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr14:87,766,745...87,888,647
Ensembl chr14:83,545,469...83,638,498
G
Pkd2
polycystin 2, transient receptor potential cation channel
involved_in acts_upstream_of_or_within
ISO
(PMID:11891195) MGI:1860866 (PMID:10615132)
RGD
PMID:10615132 PMID:11891195
NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825
G
Pkp2
plakophilin 2
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:3487374 (PMID:15479741)
GO_Central Ensembl RGD
PMID:15479741
GO_REF:0000033 GO_REF:0000107
NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
G
Pofut1
protein O-fucosyltransferase 1
acts_upstream_of_or_within
ISO IEA
MGI:2662305 (PMID:12697902) GO_REF:0000107
RGD Ensembl
PMID:12697902
GO_REF:0000107
NCBI chr 3:162,168,855...162,195,798
Ensembl chr 3:141,708,644...141,734,786
G
Popdc1
popeye domain cAMP effector 1
involved_in
ISO IBA ISS
(PMID:26642364) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:26642364
GO_REF:0000024 GO_REF:0000033
NCBI chr20:48,819,241...48,860,282
Ensembl chr20:48,822,308...48,857,472
G
Popdc2
popeye domain cAMP effector 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:62,351,843...62,398,688
Ensembl chr11:62,374,759...62,390,756
G
Popdc3
popeye domain cAMP effector 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:48,772,397...48,800,677
Ensembl chr20:48,772,462...48,800,593
G
Pou4f1
POU class 4 homeobox 1
involved_in
ISO
UniProtKB:Q63934 (PMID:28594399)
RGD
PMID:28594399
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISO IEA
UniProtKB:P17208 (PMID:28594399) GO_REF:0000107
RGD Ensembl
PMID:28594399
GO_REF:0000107
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Ppara
peroxisome proliferator activated receptor alpha
IEP
RGD
PMID:15754086
RGD:1625767
NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346
G
Ppard
peroxisome proliferator-activated receptor delta
IEP
RGD
PMID:15754086
RGD:1625767
NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,298,785...6,363,968
G
Pparg
peroxisome proliferator-activated receptor gamma
IEP
RGD
PMID:15754086
RGD:1625767
NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
IEP
RGD
PMID:9432115
RGD:8693388
NCBI chr10:36,856,534...36,878,789
Ensembl chr10:36,358,101...36,377,862
G
Ppp3cb
protein phosphatase 3 catalytic subunit beta
acts_upstream_of_or_within
ISO IEA
MGI:2181294 (PMID:11904392) GO_REF:0000107
RGD Ensembl
PMID:11904392
GO_REF:0000107
NCBI chr15:3,809,182...3,854,204
Ensembl chr15:3,760,030...3,804,981
G
Ppp3r1
protein phosphatase 3, regulatory subunit B, alpha
acts_upstream_of_or_within
ISO
MGI:3044031 (PMID:15339668)
RGD
PMID:15339668
NCBI chr14:91,556,743...91,606,391
Ensembl chr14:91,604,121...91,606,907
G
Prickle1
prickle planar cell polarity protein 1
involved_in
ISO IEA
MGI:5297388 (PMID:26883626) GO_REF:0000107
RGD Ensembl
PMID:26883626
GO_REF:0000107
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
G
Prickle4
prickle planar cell polarity protein 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:13,297,494...13,305,635
Ensembl chr 9:13,297,758...13,305,630
G
Prkar1a
protein kinase cAMP-dependent type I regulatory subunit alpha
acts_upstream_of_or_within
ISO
MGI:2182091|MGI:3512112 (PMID:18316483)
RGD
PMID:18316483
NCBI chr10:95,120,537...95,139,028
Ensembl chr10:94,620,039...94,639,041
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
acts_upstream_of_or_within
ISO IEA
MGI:107202 (PMID:16687486) GO_REF:0000107
RGD Ensembl
PMID:16687486
GO_REF:0000107
NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
G
Prkg1
protein kinase cGMP-dependent 1
IEP
RGD
PMID:2792381
RGD:7777106
NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO IEA
MGI:3051523 (PMID:15254914) GO_REF:0000107
RGD Ensembl
PMID:15254914
GO_REF:0000107
NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650
G
Pskh1
protein serine kinase H1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr19:50,704,780...50,736,890
Ensembl chr19:33,794,935...33,827,032
G
Ptcd2
pentatricopeptide repeat domain 2
acts_upstream_of_or_within
ISO IEA
MGI:3830811 (PMID:18729827) GO_REF:0000107
RGD Ensembl
PMID:18729827
GO_REF:0000107
NCBI chr 2:30,712,276...30,739,968
Ensembl chr 2:30,712,280...30,739,942
G
Pten
phosphatase and tensin homolog
acts_upstream_of_or_within
ISO
MGI:3578141 (PMID:15755804)
RGD
PMID:15755804
NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
G
Ptk7
protein tyrosine kinase 7
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
G
Ptn
pleiotrophin
IEP
RGD
PMID:17925408
RGD:10044023
NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456
G
Ptpn11
protein tyrosine phosphatase, non-receptor type 11
involved_in
ISO IEA
(PMID:12058348) GO_REF:0000107
RGD Ensembl
PMID:12058348
GO_REF:0000107
NCBI chr12:41,026,079...41,085,577
Ensembl chr12:35,383,144...35,424,925
G
Ptprj
protein tyrosine phosphatase, receptor type, J
acts_upstream_of_or_within
ISO IEA
MGI:2653313 (PMID:12588999) GO_REF:0000107
RGD Ensembl
PMID:12588999
GO_REF:0000107
NCBI chr 3:96,861,785...97,017,702
Ensembl chr 3:76,405,927...76,562,260
G
Rad50
RAD50 double strand break repair protein
IEP
RGD
PMID:10908350
RGD:68816
NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
G
Raf1
Raf-1 proto-oncogene, serine/threonine kinase
IEP
RGD
PMID:9779826
RGD:70317
NCBI chr 4:150,352,158...150,412,813
Ensembl chr 4:148,679,530...148,740,317
G
Ramp2
receptor activity modifying protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:18097473)
UniProt RGD
PMID:18097473
GO_REF:0000024
NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,188,812...86,231,829
G
Rapgef4
Rap guanine nucleotide exchange factor 4
IEP
RGD
PMID:18697745
RGD:2314761
NCBI chr 3:77,217,024...77,509,933
Ensembl chr 3:56,809,270...57,102,316
G
Rb1cc1
RB1-inducible coiled-coil 1
acts_upstream_of_or_within
ISO IEA
MGI:3690329 (PMID:17015619) GO_REF:0000107
RGD Ensembl
PMID:17015619
GO_REF:0000107
NCBI chr 5:17,948,522...18,012,434
Ensembl chr 5:13,161,648...13,225,560
G
Rbfox2
RNA binding fox-1 homolog 2
IEP
RGD
PMID:24151077
RGD:329848997
NCBI chr 7:110,691,230...110,934,901
Ensembl chr 7:108,810,628...109,054,691
G
Rbp4
retinol binding protein 4
involved_in
ISO
(PMID:15994349)
RGD
PMID:15994349
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in acts_upstream_of_or_within
ISO
(PMID:21311046) MGI:1857411 (PMID:14701881)
RGD
PMID:14701881 PMID:21311046
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Ripply3
ripply transcriptional repressor 3
involved_in
ISO
(PMID:21177346)
RGD
PMID:21177346
NCBI chr11:47,118,147...47,126,244
Ensembl chr11:33,648,486...33,656,584
G
Robo1
roundabout guidance receptor 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Rps6ka2
ribosomal protein S6 kinase A2
acts_upstream_of_or_within
ISO IEA
(PMID:16585392) GO_REF:0000107
RGD Ensembl
PMID:16585392
GO_REF:0000107
NCBI chr 1:55,178,988...55,454,271
Ensembl chr 1:52,631,736...52,906,739
G
Rxra
retinoid X receptor alpha
acts_upstream_of_or_within
ISO
MGI:2385921 (PMID:9550726)
RGD
PMID:9550726
NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712
G
Rxrg
retinoid X receptor gamma
IEP
RGD
PMID:10328854
RGD:2325975
NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
G
Sall1
spalt-like transcription factor 1
involved_in
ISO IEA
(PMID:11484202) GO_REF:0000107
RGD Ensembl
PMID:11484202
GO_REF:0000107
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
G
Sall4
spalt-like transcription factor 4
acts_upstream_of_or_within
ISO IEA
MGI:3587949 (PMID:16380715) GO_REF:0000107
RGD Ensembl
PMID:16380715
GO_REF:0000107
NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822
G
Sema3c
semaphorin 3C
acts_upstream_of_or_within
ISO IEA
MGI:2150759 (PMID:11688556) GO_REF:0000107
RGD Ensembl
PMID:11688556
GO_REF:0000107
NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534
G
Senp2
SUMO specific peptidase 2
acts_upstream_of_or_within
ISO IEA
MGI:3818535 (PMID:20417598) GO_REF:0000107
RGD Ensembl
PMID:20417598
GO_REF:0000107
NCBI chr11:92,487,259...92,522,795
Ensembl chr11:78,981,432...79,018,238
G
Sh3pxd2b
SH3 and PX domains 2B
involved_in
ISO IEA
(PMID:20137777) GO_REF:0000107
RGD Ensembl
PMID:20137777
GO_REF:0000107
NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
G
Shc1
SHC adaptor protein 1
acts_upstream_of_or_within
ISO IEA
MGI:2384189 (PMID:10809671) GO_REF:0000107
RGD Ensembl
PMID:10809671
GO_REF:0000107
NCBI chr 2:174,837,937...174,849,538
Ensembl chr 2:174,837,930...174,849,536
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:1857796 (PMID:10500184), (PMID:11172440), (PMID:15936751)
UniProt Ensembl RGD
PMID:10500184 PMID:11172440 PMID:15936751
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
G
Slc25a4
solute carrier family 25 member 4
IEP
RGD
PMID:12676547
RGD:9681465
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
G
Smad2
SMAD family member 2
acts_upstream_of_or_within
ISO
MGI:87912 (PMID:17849440)
RGD
PMID:17849440
NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
MGI:2450311|MGI:3605892 (PMID:18267097)
RGD
PMID:18267097
NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975
G
Smg9
SMG9 nonsense mediated mRNA decay factor
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:27018474) GO_REF:0000107
UniProt RGD Ensembl
PMID:27018474
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:79,988,540...80,011,262
Ensembl chr 1:79,988,612...80,011,254
G
Smyd1
SET and MYND domain containing 1
acts_upstream_of_or_within
ISO IEA
MGI:2179298 (PMID:11923873) GO_REF:0000107
RGD Ensembl
PMID:11923873
GO_REF:0000107
NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
G
Smyd2
SET and MYND domain containing 2
IEP
RGD
PMID:20305823
RGD:9586367
NCBI chr13:103,956,470...103,997,774
Ensembl chr13:101,425,273...101,466,576
G
Smyd4
SET and MYND domain containing 4
involved_in
ISO IEA IBA
(PMID:30110327) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:30110327
GO_REF:0000033 GO_REF:0000107
NCBI chr10:60,200,067...60,246,387
Ensembl chr10:60,200,114...60,246,387
G
Sod2
superoxide dismutase 2
acts_upstream_of_or_within
ISO IEA
MGI:1857344 (PMID:7493016) GO_REF:0000107
RGD Ensembl
PMID:7493016
GO_REF:0000107
NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:47,636,528...47,645,189
G
Sox17
SRY-box transcription factor 17
involved_in
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:17360443)
GO_Central Ensembl RGD
PMID:17360443
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Sox18
SRY-box transcription factor 18
NOT|acts_upstream_of_or_within
ISO
MGI:2178809 (PMID:11094083) MGI:1856135 (PMID:10742113)
RGD
PMID:10742113 PMID:11094083
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:8614465)
RGD
PMID:8614465
NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2429649 (PMID:15096597)
GO_Central Ensembl RGD
PMID:15096597
GO_REF:0000033 GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Sparc
secreted protein acidic and cysteine rich
IEP
RGD
PMID:8287436
RGD:2300077
NCBI chr10:40,017,065...40,038,816
Ensembl chr10:39,516,406...39,538,396
G
Srf
serum response factor
acts_upstream_of_or_within
ISO IEA
MGI:2385465|MGI:2386742|MGI:3046779 (PMID:15169892), (PMID:15929941) GO_REF:0000107
RGD Ensembl
PMID:15169892 PMID:15929941
GO_REF:0000107
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
G
Sri
sorcin
IEP
RGD
PMID:9668070
RGD:7327211
NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:67,444,757...67,464,719
Ensembl chr 8:58,549,736...58,568,860
G
Sypl2
synaptophysin-like 2
acts_upstream_of_or_within
ISO
MGI:1330824 (PMID:28706255)
RGD
PMID:28706255
NCBI chr 2:195,849,062...195,863,794
Ensembl chr 2:195,849,062...195,863,794
G
Tab2
TGF-beta activated kinase 1/MAP3K7 binding protein 2
involved_in
ISO IEA IBA ISS
(PMID:20493459) GO_REF:0000107 GO_REF:0000033 GO_REF:0000024
RGD Ensembl GO_Central UniProt
PMID:20493459
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 1:4,195,400...4,245,485
Ensembl chr 1:2,375,490...2,424,756
G
Tbc1d32
TBC1 domain family, member 32
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr20:35,902,281...36,133,161
Ensembl chr20:35,359,863...35,590,415
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:21177346) MGI:104686|MGI:109340|MGI:2179136|MGI:2179190|MGI:2179191 (PMID:11239417), (PMID:11242110), (PMID:11971873), (PMID:16399080), (PMID:16556915) (PMID:14585638)
UniProt RGD
PMID:11239417 PMID:11242110 PMID:11971873 PMID:14585638 PMID:16399080 PMID:16556915 PMID:21177346 More...
GO_REF:0000024
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tbx20
T-box transcription factor 20
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx5
T-box transcription factor 5
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2387851 (PMID:11572777), (PMID:15289437), (PMID:16870172) (PMID:8988164), (PMID:8988165) (PMID:15138308), (PMID:16183809), (PMID:25963046), (PMID:8988165)
UniProt Ensembl RGD
PMID:8988164 PMID:8988165 PMID:11572777 PMID:15138308 PMID:15289437 PMID:16183809 PMID:16870172 PMID:25963046 More...
GO_REF:0000024 GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tead1
TEA domain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3028949 (PMID:7958896)
RGD
PMID:7958896
NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
G
Tek
TEK receptor tyrosine kinase
involved_in
ISO
(PMID:7958865)
RGD
PMID:7958865
NCBI chr 5:114,722,815...114,849,535
Ensembl chr 5:109,607,077...109,733,804
G
Tert
telomerase reverse transcriptase
IEP
RGD
PMID:9344766
RGD:405878063
NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561
G
Tfdp2
transcription factor Dp-2
IEP
RGD
PMID:12682052
RGD:1581724
NCBI chr 8:96,760,459...96,901,466
Ensembl chr 8:96,760,504...96,896,682
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO IEA
(PMID:7600998) GO_REF:0000107
RGD Ensembl
PMID:7600998
GO_REF:0000107
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb2
transforming growth factor, beta 2
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:1888389 (PMID:15528466) (PMID:15896309)
UniProt Ensembl RGD
PMID:15528466 PMID:15896309
GO_REF:0000024 GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in acts_upstream_of_or_within
ISS IEA ISO IBA
GO_REF:0000024 GO_REF:0000107 MGI:2386570|MGI:2388050 (PMID:17078885) GO_REF:0000033
AgBase Ensembl RGD GO_Central
PMID:17078885
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2384511|MGI:2384513|MGI:2386570 (PMID:16332365), (PMID:17078885)
GO_Central Ensembl RGD
PMID:16332365 PMID:17078885
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Th
tyrosine hydroxylase
acts_upstream_of_or_within involved_in
IDA ISO IBA
MGI:1860450|MGI:1860480 (PMID:10212311), (PMID:7715703) GO_REF:0000033
RGD GO_Central
PMID:7715703 PMID:10212311 PMID:21280046
GO_REF:0000033, RGD:5128679
NCBI chr 1:207,500,959...207,508,276
Ensembl chr 1:198,071,503...198,109,767
G
Tmem67
transmembrane protein 67
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 5:30,333,793...30,386,702
Ensembl chr 5:25,536,458...25,589,334
G
Tnni3
troponin I3, cardiac type
acts_upstream_of_or_within
ISO IEA
(PMID:15611140) GO_REF:0000107
RGD Ensembl
PMID:15611140
GO_REF:0000107
NCBI chr 1:78,342,571...78,346,255
Ensembl chr 1:69,299,900...69,303,580
G
Tnnt2
troponin T2, cardiac type
acts_upstream_of_or_within
ISO
MGI:3692598|MGI:3692603 (PMID:9637714)
RGD
PMID:9637714
NCBI chr13:49,819,123...49,837,125
Ensembl chr13:47,267,204...47,285,388
G
Tp53
tumor protein p53
acts_upstream_of_or_within
ISO IEA
MGI:107934|MGI:96952 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
G
Tp53bp2
tumor protein p53 binding protein, 2
acts_upstream_of_or_within
ISO
MGI:3625686 (PMID:16702401)
RGD
PMID:16702401
NCBI chr13:94,088,769...94,145,436
Ensembl chr13:94,088,709...94,145,432
G
Traf3ip2
Traf3 interacting protein 2
involved_in
ISO
(PMID:27466370)
RGD
PMID:27466370
NCBI chr20:43,011,405...43,054,654
Ensembl chr20:43,011,450...43,054,667
G
Tsc2
TSC complex subunit 2
acts_upstream_of_or_within
ISO
MGI:1926345 (PMID:10096549)
RGD
PMID:10096549
NCBI chr10:14,125,679...14,160,317
Ensembl chr10:13,621,136...13,655,951
G
Ttn
titin
involved_in
ISO
(PMID:9817758)
RGD
PMID:9817758
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
G
Txnrd2
thioredoxin reductase 2
acts_upstream_of_or_within
ISO
MGI:3512409 (PMID:15485910)
RGD
PMID:15485910
NCBI chr11:96,024,321...96,072,475
Ensembl chr11:82,519,999...82,568,156
G
Uty
ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:22192413) GO_REF:0000033
RGD GO_Central
PMID:22192413
GO_REF:0000033
NCBI chr Y:1,018,111...1,178,493
Ensembl chr Y:924,168...1,103,422
G
Vcam1
vascular cell adhesion molecule 1
acts_upstream_of_or_within
ISO
MGI:1857452 (PMID:7539357)
RGD
PMID:7539357
NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:204,038,114...204,057,958
G
Vcan
versican
acts_upstream_of_or_within
ISO
MGI:1857689 (PMID:9758703)
RGD
PMID:9758703
NCBI chr 2:22,497,035...22,595,955
Ensembl chr 2:20,761,718...20,860,637
G
Vdr
vitamin D receptor
IEP
RGD
PMID:12107506
RGD:8158091
NCBI chr 7:130,864,764...130,916,757
Ensembl chr 7:128,987,981...129,037,677
G
Vegfb
vascular endothelial growth factor B
acts_upstream_of_or_within
ISO
MGI:2178819 (PMID:10666423)
RGD
PMID:10666423
NCBI chr 1:213,601,570...213,607,254
Ensembl chr 1:204,172,225...204,177,944
G
Vldlr
very low density lipoprotein receptor
IEP
RGD
PMID:12051760
RGD:625449
NCBI chr 1:234,239,769...234,272,150
Ensembl chr 1:224,814,377...224,845,920
G
Wdr11
WD repeat domain 11
involved_in
ISO
(PMID:29263200)
RGD
PMID:29263200
NCBI chr 1:184,165,260...184,210,834
Ensembl chr 1:184,165,571...184,210,846
G
Wnk1
WNK lysine deficient protein kinase 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19644017)
Ensembl RGD
PMID:19644017
GO_REF:0000107
NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905
G
Wnt3a
Wnt family member 3A
involved_in
ISO IEA
(PMID:19736317) GO_REF:0000107
RGD Ensembl
PMID:19736317
GO_REF:0000107
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
G
Wt1
WT1 transcription factor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:10101119) UniProtKB:P22561 (PMID:10101119)
UniProt Ensembl RGD
PMID:10101119
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
G
Zdhhc16
zinc finger DHHC-type palmitoyltransferase 16
involved_in
ISO IEA IBA
(PMID:26644582) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:26644582
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:240,745,606...240,757,009
Ensembl chr 1:240,745,641...240,757,009
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
acts_upstream_of_or_within
ISO
MGI:3050540 (PMID:15226444)
RGD
PMID:15226444
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Zfpm1
zinc finger protein, multitype 1
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2450311|MGI:3583784 (PMID:14614148)
GO_Central Ensembl RGD
PMID:14614148
GO_REF:0000033 GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
G
Zfpm2
zinc finger protein, multitype 2
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2182616|MGI:3587413 (PMID:10888889), (PMID:10892744), (PMID:16103912)
GO_Central Ensembl RGD
PMID:10888889 PMID:10892744 PMID:16103912
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
G
Zic3
Zic family member 3
involved_in
ISO
MGI:3698161|MGI:5476827 (PMID:17127413), (PMID:23184148), (PMID:23303524)
RGD
PMID:17127413 PMID:23184148 PMID:23303524
NCBI chr X:141,159,623...141,165,587
Ensembl chr X:136,124,026...136,134,746
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adra1a
adrenoceptor alpha 1A
acts_upstream_of_or_within
ISO
MGI:104774 (PMID:12782680)
RGD
PMID:12782680
NCBI chr15:45,005,648...45,111,416
Ensembl chr15:40,832,534...40,927,500
G
Adra1b
adrenoceptor alpha 1B
acts_upstream_of_or_within
ISO
MGI:104773 (PMID:12782680)
RGD
PMID:12782680
NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,255,025...28,312,919
G
Apela
apelin receptor early endogenous ligand
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465
G
Aplnr
apelin receptor
involved_in
ISO IEA
(PMID:28663440) GO_REF:0000107
RGD Ensembl
PMID:28663440
GO_REF:0000107
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of_or_within
ISO
MGI:3840841 (PMID:23046516)
RGD
PMID:23046516
NCBI chr 6:32,090,497...32,234,487
Ensembl chr 6:26,425,954...26,507,477
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:16798733)
Ensembl RGD
PMID:16798733
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO IEA
MGI:3588650 (PMID:16207732) GO_REF:0000107
RGD Ensembl
PMID:16207732
GO_REF:0000107
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Gja1
gap junction protein, alpha 1
acts_upstream_of_or_within
ISO
MGI:1857177 (PMID:9486664)
RGD
PMID:9486664
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:9878849) GO_REF:0000107 MGI:1857639 (PMID:9171826)
RGD Ensembl
PMID:9171826 PMID:9878849
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Mef2d
myocyte enhancer factor 2D
involved_in
ISO IEA
(PMID:10458488) GO_REF:0000107
RGD Ensembl
PMID:10458488
GO_REF:0000107
NCBI chr 2:173,606,054...173,635,620
Ensembl chr 2:173,606,490...173,634,457
G
Mnat1
MNAT1 component of CDK activating kinase
acts_upstream_of_or_within
ISO IEA
MGI:3707001 (PMID:17276355) GO_REF:0000107
RGD Ensembl
PMID:17276355
GO_REF:0000107
NCBI chr 6:97,550,566...97,706,598
Ensembl chr 6:91,814,749...91,970,744
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
MGI:2386439|MGI:2386445|MGI:3052104 (PMID:10712438), (PMID:12893741), (PMID:9356462) GO_REF:0000107
RGD Ensembl
PMID:9356462 PMID:10712438 PMID:12893741
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Myh6
myosin heavy chain 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2182704|MGI:3652543|MGI:3664197|MGI:3690299|MGI:3690300 (PMID:10066683), (PMID:15001446), (PMID:16983074), (PMID:8878443), (PMID:9884344) (PMID:15735645), (PMID:15998695)
Ensembl RGD
PMID:8878443 PMID:9884344 PMID:10066683 PMID:15001446 PMID:15735645 PMID:15998695 PMID:16983074 More...
GO_REF:0000107
NCBI chr15:32,388,102...32,413,663
Ensembl chr15:28,417,616...28,441,720
G
Myh7
myosin heavy chain 7
involved_in
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 (PMID:15856146)
Ensembl GO_Central RGD
PMID:15856146
GO_REF:0000033 GO_REF:0000107
NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
G
Nkx2-5
NK2 homeobox 5
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:9651244) GO_REF:0000107 MGI:1927227 (PMID:7628699)
RGD Ensembl
PMID:7628699 PMID:9651244
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Slc22a5
solute carrier family 22 member 5
acts_upstream_of_or_within
ISO IEA
MGI:1856926 (PMID:9140816) GO_REF:0000107
RGD Ensembl
PMID:9140816
GO_REF:0000107
NCBI chr10:38,509,072...38,536,240
Ensembl chr10:38,008,311...38,035,309
G
Tcap
titin-cap
involved_in
ISO
(PMID:9817758)
RGD
PMID:9817758
NCBI chr10:83,878,006...83,879,174
Ensembl chr10:83,381,719...83,382,887
G
Ttn
titin
acts_upstream_of_or_within
ISO
MGI:3654306 (PMID:16702235)
RGD
PMID:16702235
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ace
angiotensin I converting enzyme
IMP
RGD
PMID:22123369
RGD:6893472
NCBI chr10:91,410,129...91,430,246
Ensembl chr10:90,910,316...90,931,131
G
Fgf2
fibroblast growth factor 2
IMP
RGD
PMID:11397779
RGD:8655634
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
G
Nrp1
neuropilin 1
involved_in
ISO IEA
(PMID:24401374) GO_REF:0000107
RGD Ensembl
PMID:24401374
GO_REF:0000107
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Vegfa
vascular endothelial growth factor A
IMP
RGD
PMID:11397779
RGD:8655634
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO IEA
(PMID:16730346) GO_REF:0000107
RGD Ensembl
PMID:16730346
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
GO:1905314 (PMID:12441304) GO_REF:0000107
RGD Ensembl
PMID:12441304
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
(PMID:22300732)
RGD
PMID:22300732
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Pcdha10
protocadherin alpha 10
acts_upstream_of_or_within
ISO
(PMID:34888534)
RGD
PMID:34888534
Ensembl chr18:28,581,225...28,846,211
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:26491108)
RGD
PMID:26491108
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tnfrsf1a
TNF receptor superfamily member 1A
involved_in
ISO
UniProtKB:P25119 (PMID:26491108)
RGD
PMID:26491108
NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:158,150,820...158,163,591
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO
UniProtKB:P25118 (PMID:26491108)
RGD
PMID:26491108
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cdh11
cadherin 11
involved_in
ISO
UniProtKB:P61586 (PMID:26188246)
RGD
PMID:26188246
NCBI chr19:2,152,961...2,312,140
Ensembl chr19:2,148,458...2,304,272
G
Rhoa
ras homolog family member A
involved_in
ISO IEA
UniProtKB:F1RFU7 (PMID:26188246) GO_REF:0000107
RGD Ensembl
PMID:26188246
GO_REF:0000107
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts19
ADAM metallopeptidase with thrombospondin type 1 motif, 19
involved_in
ISO IEA
(PMID:31844321), (PMID:32323311) GO_REF:0000107
RGD Ensembl
PMID:31844321 PMID:32323311
GO_REF:0000107
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
G
Adamts5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
involved_in
ISO IEA
(PMID:23531444) GO_REF:0000107
RGD Ensembl
PMID:23531444
GO_REF:0000107
NCBI chr11:38,486,945...38,533,516
Ensembl chr11:25,000,637...25,047,205
G
Axin2
axin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:28069701), (PMID:31844321)
Ensembl RGD
PMID:28069701 PMID:31844321
GO_REF:0000107
NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15070745), (PMID:18924235)
Ensembl RGD
PMID:15070745 PMID:18924235
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
(PMID:26491108) GO_REF:0000107
RGD Ensembl
PMID:26491108
GO_REF:0000107
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
G
Efna1
ephrin A1
involved_in
ISO
(PMID:20960543)
RGD
PMID:20960543
NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866
G
Eln
elastin
involved_in
IEA ISO
GO_REF:0000107 (PMID:20576933)
Ensembl RGD
PMID:20576933
GO_REF:0000107
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
G
Emilin1
elastin microfibril interfacer 1
involved_in
ISO IEA
(PMID:25056700) GO_REF:0000107
RGD Ensembl
PMID:25056700
GO_REF:0000107
NCBI chr 6:31,175,919...31,183,657
Ensembl chr 6:25,445,298...25,463,698
G
Gata3
GATA binding protein 3
involved_in
ISO IEA
(PMID:18955134) GO_REF:0000107
RGD Ensembl
PMID:18955134
GO_REF:0000107
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Gata4
GATA binding protein 4
involved_in
ISO IEA
(PMID:29325903) GO_REF:0000107
RGD Ensembl
PMID:29325903
GO_REF:0000107
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gata5
GATA binding protein 5
involved_in
ISO IEA
(PMID:22641149), (PMID:24638895) GO_REF:0000107 (PMID:21633169)
RGD Ensembl
PMID:21633169 PMID:22641149 PMID:24638895
GO_REF:0000107
NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:22110751)
RGD
PMID:22110751
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:22110751) GO_REF:0000107
RGD Ensembl
PMID:22110751
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (PMID:9515964)
RGD
PMID:9515964
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Nos3
nitric oxide synthase 3
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q01705 (PMID:10821808), (PMID:23583836), (PMID:27107132)
Ensembl RGD
PMID:10821808 PMID:23583836 PMID:27107132
GO_REF:0000107
NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:16025100), (PMID:17662764), (PMID:18593716) GO_REF:0000107 UniProtKB:P70313 (PMID:23583836), (PMID:26491108), (PMID:27107132)
RGD Ensembl
PMID:16025100 PMID:17662764 PMID:18593716 PMID:23583836 PMID:26491108 PMID:27107132 More...
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Rb1
RB transcriptional corepressor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:29304157)
Ensembl RGD
PMID:29304157
GO_REF:0000107
NCBI chr15:54,780,858...54,911,989
Ensembl chr15:48,371,296...48,502,302
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO
UniProtKB:M3TYT0 (PMID:26634652)
RGD
PMID:26634652
NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,115,905...1,235,571
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
ISO
UniProtKB:I3LFH3 (PMID:26634652)
RGD
PMID:26634652
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
G
Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Slit3
slit guidance ligand 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25691540)
Ensembl RGD
PMID:25691540
GO_REF:0000107
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
G
Smad2
SMAD family member 2
involved_in
ISO
UniProtKB:Q9R001 (PMID:23531444)
RGD
PMID:23531444
NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323
G
Smad6
SMAD family member 6
involved_in
ISO IEA
(PMID:22275001) GO_REF:0000107
RGD Ensembl
PMID:22275001
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Sox9
SRY-box transcription factor 9
involved_in
ISO IEA
(PMID:22110751) GO_REF:0000107
RGD Ensembl
PMID:22110751
GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:18275040), (PMID:18834961) GO_REF:0000107
RGD Ensembl
PMID:18275040 PMID:18834961
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO IEA
(PMID:26634652) GO_REF:0000107
RGD Ensembl
PMID:26634652
GO_REF:0000107
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20101701) GO_REF:0000107
RGD Ensembl
PMID:20101701
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Tie1
tyrosine kinase with immunoglobulin-like and EGF-like domains 1
involved_in
ISO IEA
(PMID:31319059) GO_REF:0000107
RGD Ensembl
PMID:31319059
GO_REF:0000107
NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:20804746)
RGD
PMID:20804746
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18924235)
RGD
PMID:18924235
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ccn1
cellular communication network factor 1
acts_upstream_of_or_within
ISO
MGI:2446577 (PMID:17023674)
RGD
PMID:17023674
NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:1857639 (PMID:11784028) GO_REF:0000107
RGD Ensembl
PMID:11784028
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
(PMID:16510504) GO_REF:0000107
RGD Ensembl
PMID:16510504
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Foxc1
forkhead box C1
acts_upstream_of
ISO IEA
MGI:1347481 (PMID:16839542) GO_REF:0000107
RGD Ensembl
PMID:16839542
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of
ISO
MGI:1347466 (PMID:16839542)
RGD
PMID:16839542
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Fhl2
four and a half LIM domains 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:15509787)
Ensembl RGD
PMID:15509787
GO_REF:0000107
NCBI chr 9:52,881,091...52,954,540
Ensembl chr 9:45,388,981...45,431,192
G
Nkx2-6
NK2 homeobox 6
involved_in
ISO
(PMID:9621431)
RGD
PMID:9621431
NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:3773698|MGI:4867385 (PMID:20929948)
Ensembl RGD
PMID:20929948
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:17234970)
Ensembl RGD
PMID:17234970
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO IEA
MGI:3052754 (PMID:15254239) GO_REF:0000107
RGD Ensembl
PMID:15254239
GO_REF:0000107
NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796
G
Zic3
Zic family member 3
involved_in
ISO
MGI:3698161 (PMID:17468179)
RGD
PMID:17468179
NCBI chr X:141,159,623...141,165,587
Ensembl chr X:136,124,026...136,134,746
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:10072785)
Ensembl RGD
PMID:10072785
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Eng
endoglin
involved_in
ISO
(PMID:17628518)
RGD
PMID:17628518
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Myh6
myosin heavy chain 6
involved_in
IEA ISO
GO_REF:0000107 (PMID:15735645)
Ensembl RGD
PMID:15735645
GO_REF:0000107
NCBI chr15:32,388,102...32,413,663
Ensembl chr15:28,417,616...28,441,720
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:2136268 (PMID:11493526)
RGD
PMID:11493526
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Prox1
prospero homeobox 1
involved_in
ISO IEA
(PMID:19091769) GO_REF:0000107
RGD Ensembl
PMID:19091769
GO_REF:0000107
NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
G
Tnnt2
troponin T2, cardiac type
acts_upstream_of_or_within
ISO
MGI:3692448|MGI:3692450|MGI:3692451 (PMID:10449439)
RGD
PMID:10449439
NCBI chr13:49,819,123...49,837,125
Ensembl chr13:47,267,204...47,285,388
G
Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (PMID:20159597)
RGD
PMID:20159597
NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:46,333,998...46,374,402
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ank2
ankyrin 2
involved_in
ISO IEA
(PMID:18832177) GO_REF:0000107
RGD Ensembl
PMID:18832177
GO_REF:0000107
NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:215,379,680...215,862,923
G
Dand5
DAN domain BMP antagonist family member 5
involved_in
ISO
(PMID:15466485)
RGD
PMID:15466485
NCBI chr19:40,231,061...40,245,329
Ensembl chr19:23,334,164...23,339,589
G
Gja5
gap junction protein, alpha 5
involved_in
ISO IEA
(PMID:22199024) GO_REF:0000107
RGD Ensembl
PMID:22199024
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (PMID:22821713)
RGD
PMID:22821713
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
G
Nphp3
nephrocystin 3
involved_in
ISO IEA
(PMID:18371931) GO_REF:0000107
RGD Ensembl
PMID:18371931
GO_REF:0000107
NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:104,621,864...104,662,383
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:2387851 (PMID:19084512) GO_REF:0000107
RGD Ensembl
PMID:19084512
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Wnt11
Wnt family member 11
involved_in
ISO IEA
UniProtKB:P22725 (PMID:22569553) GO_REF:0000107
RGD Ensembl
PMID:22569553
GO_REF:0000107
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P48615 (PMID:22569553)
Ensembl RGD
PMID:22569553
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
(PMID:19409885) GO_REF:0000107
RGD Ensembl
PMID:19409885
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Ccn1
cellular communication network factor 1
acts_upstream_of_or_within
ISO
MGI:2446577 (PMID:17023674)
RGD
PMID:17023674
NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484
G
Cfc1
cripto, FRL-1, cryptic family 1
acts_upstream_of_or_within
ISO IEA
MGI:2179530 (PMID:10521397) GO_REF:0000107
RGD Ensembl
PMID:10521397
GO_REF:0000107
NCBI chr 9:44,234,997...44,247,846
Ensembl chr 9:36,739,071...36,751,930
G
Gata4
GATA binding protein 4
involved_in
ISO IEA
(PMID:12845333) GO_REF:0000107
RGD Ensembl
PMID:12845333
GO_REF:0000107
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445238 (PMID:10969038) GO_REF:0000107
RGD Ensembl
PMID:10969038
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q02248 (PMID:17519333)
Ensembl RGD
PMID:17519333
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:10587520), (PMID:9651244) GO_REF:0000107
RGD Ensembl
PMID:9651244 PMID:10587520
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch2
notch receptor 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16773578)
Ensembl RGD
PMID:16773578
GO_REF:0000107
NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088
G
Smo
smoothened, frizzled class receptor
acts_upstream_of_or_within
ISO IEA
MGI:102541 (PMID:22898775) GO_REF:0000107
RGD Ensembl
PMID:22898775
GO_REF:0000107
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:17668378), (PMID:18834961), (PMID:19762328) GO_REF:0000107
RGD Ensembl
PMID:17668378 PMID:18834961 PMID:19762328
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:108075 (PMID:22898775) GO_REF:0000107
RGD Ensembl
PMID:22898775
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107 (PMID:16140292)
RGD Ensembl
PMID:16140292 PMID:19506109
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Gata4
GATA binding protein 4
involved_in
ISO
(PMID:17643447)
RGD
PMID:17643447
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3851507 (PMID:19483677) GO_REF:0000107
RGD Ensembl
PMID:19483677
GO_REF:0000107
NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:16109771)
RGD
PMID:16109771
NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:11390347) GO_REF:0000107
RGD Ensembl
PMID:11390347
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gata4
GATA binding protein 4
involved_in
ISO IEA
(PMID:20347099) GO_REF:0000107
RGD Ensembl
PMID:20347099
GO_REF:0000107
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3851507 (PMID:19483677) GO_REF:0000107
RGD Ensembl
PMID:19483677
GO_REF:0000107
NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gja1
gap junction protein, alpha 1
acts_upstream_of_or_within
ISO
MGI:95716 (PMID:10969038)
RGD
PMID:10969038
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445238 (PMID:10969038) GO_REF:0000107
RGD Ensembl
PMID:10969038
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Irx3
iroquois homeobox 3
involved_in
ISO IEA
(PMID:26786475) GO_REF:0000107
RGD Ensembl
PMID:26786475
GO_REF:0000107
NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:3710254 (PMID:18467625) GO_REF:0000107
RGD Ensembl
PMID:18467625
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:15289437)
Ensembl RGD
PMID:15289437
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO IEA
MGI:2450311|MGI:4433295 (PMID:26102480) GO_REF:0000107
RGD Ensembl
PMID:26102480
GO_REF:0000107
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Gata4
GATA binding protein 4
involved_in
ISO
UniProtKB:P97471 (PMID:21330551)
RGD
PMID:21330551
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Has2
hyaluronan synthase 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:10930438)
UniProt Ensembl RGD
PMID:10930438
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
G
Ptpn11
protein tyrosine phosphatase, non-receptor type 11
involved_in
ISO IEA
(PMID:12058348) GO_REF:0000107
RGD Ensembl
PMID:12058348
GO_REF:0000107
NCBI chr12:41,026,079...41,085,577
Ensembl chr12:35,383,144...35,424,925
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q08369 (PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
UniProtKB:P70324 (PMID:15459098), (PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:15459098 PMID:22130515
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:21983003) GO_REF:0000107
RGD Ensembl
PMID:21983003
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx3
T-box transcription factor 3
involved_in
ISO IEA
UniProtKB:Q60707 (PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Nfix
nuclear factor I X
involved_in
ISO
MGI:3714028 (PMID:25960350)
RGD
PMID:25960350
NCBI chr19:40,259,873...40,356,966
Ensembl chr19:23,355,498...23,448,265
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
UniProtKB:P70324 (PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx3
T-box transcription factor 3
involved_in
ISO IEA
UniProtKB:Q60707 (PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:17998461) GO_REF:0000107
RGD Ensembl
PMID:17998461
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Maml1
mastermind-like transcriptional coactivator 1
involved_in
ISO IEA
(PMID:21266778) GO_REF:0000107
RGD Ensembl
PMID:21266778
GO_REF:0000107
NCBI chr10:34,588,639...34,623,024
Ensembl chr10:34,588,646...34,623,338
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:3042511 (PMID:19546853) GO_REF:0000107
RGD Ensembl
PMID:19546853
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:15289437)
Ensembl RGD
PMID:15289437
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO IEA
MGI:6358100 (PMID:29666184) GO_REF:0000107
RGD Ensembl
PMID:29666184
GO_REF:0000107
NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:3042511 (PMID:15109497) GO_REF:0000107
RGD Ensembl
PMID:15109497
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:15289437)
Ensembl RGD
PMID:15289437
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:18689573) GO_REF:0000107
RGD Ensembl
PMID:18689573
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21266778) GO_REF:0000107
RGD Ensembl
PMID:21266778
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Aplnr
apelin receptor
involved_in
ISO IEA
(PMID:23603510) GO_REF:0000107
RGD Ensembl
PMID:23603510
GO_REF:0000107
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:11854453) GO_REF:0000107
RGD Ensembl
PMID:11854453
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:3574394 (PMID:15297376) GO_REF:0000107
RGD Ensembl
PMID:15297376
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:2386742 (PMID:18292603)
RGD
PMID:18292603
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:21983003) GO_REF:0000107
RGD Ensembl
PMID:21983003
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gata4
GATA binding protein 4
involved_in
ISO
UniProtKB:P97471 (PMID:21330551)
RGD
PMID:21330551
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:17259303)
RGD
PMID:17259303
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:31,918,512...31,956,261
Ensembl chr 3:11,520,729...11,558,239
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q08369 (PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:16140292) GO_REF:0000107
RGD Ensembl
PMID:16140292
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3583785 (PMID:16314491) GO_REF:0000107
RGD Ensembl
PMID:16314491
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmpr2
bone morphogenetic protein receptor type 2
NOT|involved_in
ISO
(PMID:12441304)
RGD
PMID:12441304
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Ccn1
cellular communication network factor 1
acts_upstream_of_or_within
ISO
MGI:2446577 (PMID:17023674)
RGD
PMID:17023674
NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:102541 (PMID:19084512)
RGD
PMID:19084512
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
UniProtKB:Q9WV93 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (PMID:22821713)
RGD
PMID:22821713
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:14701881), (PMID:21266778) GO_REF:0000107
RGD Ensembl
PMID:14701881 PMID:21266778
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Slit3
slit guidance ligand 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25691540)
Ensembl RGD
PMID:25691540
GO_REF:0000107
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:95664 (PMID:19084512) GO_REF:0000107
RGD Ensembl
PMID:19084512
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20652948) GO_REF:0000107
RGD Ensembl
PMID:20652948
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:2384134 (PMID:17604724)
RGD
PMID:17604724
NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:102541 (PMID:17604724) GO_REF:0000107
RGD Ensembl
PMID:17604724
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within involved_in
ISO IEA
MGI:97350 (PMID:17604724) GO_REF:0000107 (PMID:22728936)
RGD Ensembl
PMID:17604724 PMID:22728936
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Igf1
insulin-like growth factor 1
IEP
RGD
PMID:15486038
RGD:12904917
NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
G
Igf1r
insulin-like growth factor 1 receptor
IEP
RGD
PMID:15486038
RGD:12904917
NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:121,550,743...121,831,777
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18297060) GO_REF:0000107
RGD Ensembl
PMID:18297060
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ccm2l
CCM2 like scaffold protein
acts_upstream_of_or_within
ISO
MGI:1924696 (PMID:22898778)
RGD
PMID:22898778
NCBI chr 3:141,533,470...141,549,136
Ensembl chr 3:141,533,511...141,549,140
G
Dll4
delta like canonical Notch ligand 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15466159)
Ensembl RGD
PMID:15466159
GO_REF:0000107
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:2385159|MGI:3838392 (PMID:19151727), (PMID:22898778)
RGD
PMID:19151727 PMID:22898778
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20890042) GO_REF:0000107
RGD Ensembl
PMID:20890042
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Shox2
SHOX homeobox 2
acts_upstream_of_or_within
ISO IEA
MGI:3794658 (PMID:17372176) GO_REF:0000107
RGD Ensembl
PMID:17372176
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO IEA
MGI:2155441 (PMID:9030684) GO_REF:0000107
RGD Ensembl
PMID:9030684
GO_REF:0000107
NCBI chr 6:20,286,117...20,363,350
Ensembl chr 6:14,533,360...14,611,107
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISO IEA
(PMID:23342106) GO_REF:0000107
RGD Ensembl
PMID:23342106
GO_REF:0000107
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:19571884) GO_REF:0000107 (PMID:19620969)
RGD Ensembl
PMID:19571884 PMID:19620969
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18593560) GO_REF:0000107
RGD Ensembl
PMID:18593560
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Pou5f1
POU class 5 homeobox 1
involved_in
ISO
(PMID:19736317)
RGD
PMID:19736317
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Sox17
SRY-box transcription factor 17
involved_in
ISO IEA
(PMID:19736317) GO_REF:0000107
RGD Ensembl
PMID:19736317
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Itgb1
integrin subunit beta 1
acts_upstream_of_or_within
ISO
MGI:2154539 (PMID:9004034)
RGD
PMID:9004034
NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
G
Tenm4
teneurin transmembrane protein 4
acts_upstream_of_or_within
ISO
MGI:3655239 (PMID:17350578)
RGD
PMID:17350578
NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adprhl1
ADP-ribosylhydrolase like 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr16:76,283,186...76,315,075
Ensembl chr16:76,283,103...76,354,440
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Arid1a
AT-rich interaction domain 1A
acts_upstream_of_or_within
ISO
MGI:5469314 (PMID:23129809)
RGD
PMID:23129809
NCBI chr 5:151,192,014...151,269,291
Ensembl chr 5:145,908,181...145,985,564
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:3773698|MGI:4867385 (PMID:20929948)
Ensembl RGD
PMID:20929948
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20890042) GO_REF:0000107
RGD Ensembl
PMID:20890042
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Tbx20
T-box transcription factor 20
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3580099 (PMID:19661464) GO_REF:0000107 (PMID:15901664)
RGD Ensembl
PMID:15901664 PMID:19661464
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:16037571) GO_REF:0000107
RGD Ensembl
PMID:16037571
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Cdc42
cell division cycle 42
acts_upstream_of_or_within
ISO
MGI:97350 (PMID:21690310)
RGD
PMID:21690310
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445466 (PMID:18599871), (PMID:22203979) GO_REF:0000107
RGD Ensembl
PMID:18599871 PMID:22203979
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Mir1
microRNA 1
acts_upstream_of_or_within
ISO
(PMID:17397913)
RGD
PMID:17397913
NCBI chr18:2,160,327...2,160,413
G
Nkx2-5
NK2 homeobox 5
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:27207958) GO_REF:0000107 MGI:106211 (PMID:21690310) (PMID:15109497)
RGD Ensembl
PMID:15109497 PMID:21690310 PMID:27207958
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
(PMID:12149465)
RGD
PMID:12149465
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adam15
ADAM metallopeptidase domain 15
acts_upstream_of_or_within
ISO IEA
(PMID:19156209) GO_REF:0000107
RGD Ensembl
PMID:19156209
GO_REF:0000107
NCBI chr 2:177,052,363...177,062,879
Ensembl chr 2:174,754,633...174,765,113
G
Bmp2
bone morphogenetic protein 2
involved_in
ISO IEA
(PMID:18184661) GO_REF:0000107
RGD Ensembl
PMID:18184661
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
UniProtKB:Q9WV93 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:31,918,512...31,956,261
Ensembl chr 3:11,520,729...11,558,239
G
Rtn4
reticulon 4
acts_upstream_of_or_within
ISO IEA
(PMID:19156209) GO_REF:0000107
RGD Ensembl
PMID:19156209
GO_REF:0000107
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686
G
Tbx3
T-box transcription factor 3
involved_in
ISO IEA
(PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:10092230)
UniProt Ensembl RGD
PMID:10092230
GO_REF:0000024 GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO IEA
(PMID:18184661) GO_REF:0000107
RGD Ensembl
PMID:18184661
GO_REF:0000107
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Wnt16
Wnt family member 16
acts_upstream_of_or_within
ISO IEA
(PMID:19156209) GO_REF:0000107
RGD Ensembl
PMID:19156209
GO_REF:0000107
NCBI chr 4:51,786,728...51,797,137
Ensembl chr 4:50,820,968...50,831,380
G
Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (PMID:20159597)
RGD
PMID:20159597
NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:46,333,998...46,374,402
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1b
activin A receptor type 1B
IMP
RGD
PMID:27477354
RGD:151665478
NCBI chr 7:134,164,987...134,208,389
Ensembl chr 7:132,286,275...132,329,673
G
Inhba
inhibin subunit beta A
IDA
RGD
PMID:27477354
RGD:151665478
NCBI chr17:53,787,159...53,810,942
Ensembl chr17:49,095,920...49,108,982
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18924235)
RGD
PMID:18924235
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Eng
endoglin
NOT|involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Gata5
GATA binding protein 5
NOT|involved_in
ISO
(PMID:21633169)
RGD
PMID:21633169
NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx3
T-box transcription factor 3
involved_in
ISO IEA
(PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hand1
heart and neural crest derivatives expressed 1
involved_in
ISO IEA
(PMID:18276607) GO_REF:0000107
RGD Ensembl
PMID:18276607
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO IBA
GO_REF:0000107 (PMID:19727199) GO_REF:0000033
Ensembl RGD GO_Central
PMID:19727199
GO_REF:0000033 GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ahr
aryl hydrocarbon receptor
involved_in
ISO
(PMID:14644620)
RGD
PMID:14644620
NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568
G
Cpe
carboxypeptidase E
involved_in
IEA ISO
GO_REF:0000107 (PMID:19593212)
Ensembl RGD
PMID:19593212
GO_REF:0000107
NCBI chr16:29,796,707...29,908,647
Ensembl chr16:25,030,276...25,142,233
G
Eva1a
eva-1 homolog A, regulator of programmed cell death
acts_upstream_of_or_within
ISO
(PMID:28151473)
RGD
PMID:28151473
NCBI chr 4:114,593,773...114,643,011
Ensembl chr 4:114,593,341...114,643,011
G
Foxf1
forkhead box F1
involved_in
ISO IEA
(PMID:19500772) GO_REF:0000107
RGD Ensembl
PMID:19500772
GO_REF:0000107
NCBI chr19:66,062,635...66,066,427
Ensembl chr19:49,153,699...49,157,738
G
Gsk3a
glycogen synthase kinase 3 alpha
involved_in
ISO
(PMID:20516643)
RGD
PMID:20516643
NCBI chr 1:89,943,669...89,953,514
Ensembl chr 1:80,815,850...80,825,802
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20890042) GO_REF:0000107
RGD Ensembl
PMID:20890042
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Npy2r
neuropeptide Y receptor Y2
involved_in
ISO
(PMID:19593212)
RGD
PMID:19593212
NCBI chr 2:170,200,027...170,210,286
Ensembl chr 2:167,903,879...167,905,024
G
Npy5r
neuropeptide Y receptor Y5
involved_in
ISO IEA
(PMID:19593212) GO_REF:0000107
RGD Ensembl
PMID:19593212
GO_REF:0000107
NCBI chr16:23,055,427...23,063,384
Ensembl chr16:23,055,427...23,063,382
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:21493891)
RGD
PMID:21493891
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Rnls
renalase, FAD-dependent amine oxidase
acts_upstream_of_or_within
ISO
MGI:5433853 (PMID:21178975)
RGD
PMID:21178975
NCBI chr 1:231,037,481...231,309,855
Ensembl chr 1:231,037,486...231,309,823
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO IEA
(PMID:19593212) GO_REF:0000107
RGD Ensembl
PMID:19593212
GO_REF:0000107
NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20652948) GO_REF:0000107
RGD Ensembl
PMID:20652948
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actn2
actinin alpha 2
involved_in
ISO IEA
(PMID:19815520) GO_REF:0000107
RGD Ensembl
PMID:19815520
GO_REF:0000107
NCBI chr17:62,835,055...62,902,331
Ensembl chr17:58,142,625...58,210,622
G
Alpk2
alpha-kinase 2
involved_in
ISO
(PMID:29888752)
RGD
PMID:29888752
NCBI chr18:58,775,603...58,906,150
Ensembl chr18:58,775,605...58,906,258
G
Alpk3
alpha-kinase 3
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:4206048 (PMID:21441111)
GO_Central Ensembl RGD
PMID:21441111
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:135,014,455...135,062,294
Ensembl chr 1:135,014,499...135,062,302
G
Asb2
ankyrin repeat and SOCS box-containing 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:29374072)
UniProt RGD
PMID:29374072
GO_REF:0000024
NCBI chr 6:128,239,550...128,275,833
Ensembl chr 6:122,474,756...122,510,854
G
Atg7
autophagy related 7
acts_upstream_of_or_within
ISO
(PMID:17450150)
RGD
PMID:17450150
NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
G
Cav3
caveolin 3
acts_upstream_of_or_within
ISO IEA
MGI:2684578 (PMID:19535499) GO_REF:0000107
RGD Ensembl
PMID:19535499
GO_REF:0000107
NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137
G
Ctcf
CCCTC-binding factor
acts_upstream_of_or_within
ISO IEA
(PMID:28846746) GO_REF:0000107
RGD Ensembl
PMID:28846746
GO_REF:0000107
NCBI chr19:50,431,478...50,481,013
Ensembl chr19:33,529,319...33,571,123
G
Cxadr
CXADR, Ig-like cell adhesion molecule
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:3587803 (PMID:16079292)
UniProt RGD
PMID:16079292
GO_REF:0000024
NCBI chr11:16,982,864...17,030,078
Ensembl chr11:16,982,860...17,030,046
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3641051 (PMID:18256189)
RGD
PMID:18256189
NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
G
Hdac2
histone deacetylase 2
acts_upstream_of_or_within
ISO
MGI:3712002 (PMID:17322895)
RGD
PMID:17322895
NCBI chr20:42,101,815...42,126,486
Ensembl chr20:40,548,250...40,571,609
G
Hnrnpu
heterogeneous nuclear ribonucleoprotein U
acts_upstream_of_or_within
ISO
MGI:2182095|MGI:5648110 (PMID:26039991)
RGD
PMID:26039991
NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588
G
Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO IEA
MGI:3510641 (PMID:16111892) GO_REF:0000107
RGD Ensembl
PMID:16111892
GO_REF:0000107
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
G
Lrrc10
leucine-rich repeat-containing 10
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3809940 (PMID:23236519)
GO_Central RGD
PMID:23236519
GO_REF:0000033
NCBI chr 7:52,686,972...52,688,369
Ensembl chr 7:52,686,972...52,688,369
G
Met
MET proto-oncogene, receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:3041135 (PMID:23994610)
RGD
PMID:23994610
NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:45,790,791...45,897,876
G
Mir208a
microRNA 208a
acts_upstream_of_or_within
ISO
MGI:3709980 (PMID:17379774)
RGD
PMID:17379774
NCBI chr15:28,425,570...28,425,652
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within
ISO IEA
MGI:3850506 (PMID:25139234) GO_REF:0000107
RGD Ensembl
PMID:25139234
GO_REF:0000107
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
G
Myh11
myosin heavy chain 11
involved_in
ISO IEA
(PMID:16444274) GO_REF:0000107
RGD Ensembl
PMID:16444274
GO_REF:0000107
NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
G
Myh6
myosin heavy chain 6
acts_upstream_of_or_within
ISO IEA
MGI:2182704|MGI:3652543|MGI:3664197 (PMID:10066683), (PMID:15001446), (PMID:8878443), (PMID:9884344) GO_REF:0000107
RGD Ensembl
PMID:8878443 PMID:9884344 PMID:10066683 PMID:15001446
GO_REF:0000107
NCBI chr15:32,388,102...32,413,663
Ensembl chr15:28,417,616...28,441,720
G
Myo18b
myosin XVIIIb
acts_upstream_of_or_within
ISO IEA
MGI:3829997 (PMID:18761673) GO_REF:0000107
RGD Ensembl
PMID:18761673
GO_REF:0000107
NCBI chr12:49,421,062...49,614,127
Ensembl chr12:43,747,010...43,953,695
G
Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO IEA
MGI:1934018 (PMID:26147524) GO_REF:0000107
RGD Ensembl
PMID:26147524
GO_REF:0000107
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:19166829), (PMID:21640717) GO_REF:0000107
RGD Ensembl
PMID:19166829 PMID:21640717
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Plec
plectin
involved_in
ISO IEA
MGI:2181791 (PMID:9389647) GO_REF:0000107
RGD Ensembl
PMID:9389647
GO_REF:0000107
NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:107,887,764...107,945,467
G
Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:5297388|MGI:5645931 (PMID:25190059), (PMID:26883626)
Ensembl RGD
PMID:25190059 PMID:26883626
GO_REF:0000107
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
G
Sgcb
sarcoglycan, beta
acts_upstream_of_or_within
ISO
MGI:2153048 (PMID:10678176)
RGD
PMID:10678176
NCBI chr14:34,563,614...34,578,614
Ensembl chr14:34,563,608...34,578,583
G
Sgcd
sarcoglycan, delta
acts_upstream_of_or_within
ISO
MGI:2180193 (PMID:23695275)
RGD
PMID:23695275
NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840
G
Slc8a1
solute carrier family 8 member A1
acts_upstream_of_or_within involved_in
ISO
MGI:4849923 (PMID:21302256) (PMID:10967099)
RGD
PMID:10967099 PMID:21302256
NCBI chr 6:18,975,498...19,299,704
Ensembl chr 6:13,194,662...13,535,628
G
Speg
striated muscle enriched protein kinase
acts_upstream_of_or_within
ISO
MGI:4830540 (PMID:19118250)
RGD
PMID:19118250
NCBI chr 9:76,865,714...76,923,170
Ensembl chr 9:76,865,754...76,923,144
G
Tcap
titin-cap
involved_in
ISO
(PMID:9817758)
RGD
PMID:9817758
NCBI chr10:83,878,006...83,879,174
Ensembl chr10:83,381,719...83,382,887
G
Ttn
titin
involved_in
ISO
(PMID:9817758)
RGD
PMID:9817758
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:1931047 (PMID:10229225)
RGD
PMID:10229225
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
G
Xirp1
xin actin-binding repeat containing 1
acts_upstream_of_or_within
ISO
MGI:3521795 (PMID:17766470)
RGD
PMID:17766470
NCBI chr 8:119,744,778...119,757,547
Ensembl chr 8:119,747,419...119,757,349
G
Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO IEA
MGI:2180033 (PMID:11923874) GO_REF:0000107
RGD Ensembl
PMID:11923874
GO_REF:0000107
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acadm
acyl-CoA dehydrogenase medium chain
acts_upstream_of_or_within
ISO IEA
MGI:3692446 (PMID:16121256) GO_REF:0000107
RGD Ensembl
PMID:16121256
GO_REF:0000107
NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147
G
Akap13
A-kinase anchoring protein 13
involved_in
ISS ISO
GO_REF:0000024 (PMID:20139090)
UniProt RGD
PMID:20139090
GO_REF:0000024
NCBI chr 1:138,722,445...139,029,401
Ensembl chr 1:129,314,402...129,619,646
G
Alpk3
alpha-kinase 3
involved_in
ISO IEA
(PMID:11418590) GO_REF:0000107
RGD Ensembl
PMID:11418590
GO_REF:0000107
NCBI chr 1:135,014,455...135,062,294
Ensembl chr 1:135,014,499...135,062,302
G
Arid1a
AT-rich interaction domain 1A
acts_upstream_of_or_within
ISO
(PMID:24335282)
RGD
PMID:24335282
NCBI chr 5:151,192,014...151,269,291
Ensembl chr 5:145,908,181...145,985,564
G
Asb2
ankyrin repeat and SOCS box-containing 2
involved_in
ISO ISS
(PMID:32179481) GO_REF:0000024
RGD UniProt
PMID:32179481
GO_REF:0000024
NCBI chr 6:128,239,550...128,275,833
Ensembl chr 6:122,474,756...122,510,854
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P21275 (PMID:21145505) (PMID:21311046)
Ensembl RGD
PMID:21145505 PMID:21311046
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P21274 (PMID:21145505)
Ensembl RGD
PMID:21145505
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
C16h10orf71
similar to human chromosome 10 open reading frame 71
acts_upstream_of_or_within
ISO
(PMID:38950288)
RGD
PMID:38950288
NCBI chr16:7,910,597...7,961,900
Ensembl chr16:7,910,433...7,961,958
G
Cacybp
calcyclin binding protein
IDA
mRNA:increased expression:heart
RGD
PMID:16440310
RGD:2326117
NCBI chr13:72,437,485...72,447,810
Ensembl chr13:72,437,490...72,450,177
G
Calr
calreticulin
IEP
RGD
PMID:9011638
RGD:2326218
NCBI chr19:40,213,367...40,218,262
Ensembl chr19:23,308,351...23,313,414
G
Cby1
chibby 1, beta catenin antagonist
involved_in
ISS ISO
GO_REF:0000024 (PMID:17261658)
UniProt RGD
PMID:17261658
GO_REF:0000024
NCBI chr 7:111,216,835...111,223,305
G
Cripto
cripto, EGF-CFC family member
acts_upstream_of_or_within
ISO
MGI:1857518 (PMID:9876177)
RGD
PMID:9876177
NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308
G
Ctcf
CCCTC-binding factor
acts_upstream_of_or_within
ISO IEA
(PMID:28846746) GO_REF:0000107
RGD Ensembl
PMID:28846746
GO_REF:0000107
NCBI chr19:50,431,478...50,481,013
Ensembl chr19:33,529,319...33,571,123
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:3056542|MGI:4829787 (PMID:15342473), (PMID:20713518)
RGD
PMID:15342473 PMID:20713518
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
IEP ISO
MGI:102541|MGI:107516|MGI:3793424|MGI:99458 (PMID:18400219), (PMID:20691899)
RGD
PMID:18400219 PMID:20691899 PMID:20486789
RGD:5131636
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gata6
GATA binding protein 6
acts_upstream_of_or_within
ISO
MGI:3793425|MGI:95664 (PMID:18400219)
RGD
PMID:18400219
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Greb1l
GREB1 like retinoic acid receptor coactivator
acts_upstream_of_or_within
ISO IEA
(PMID:37852253) GO_REF:0000107
RGD Ensembl
PMID:37852253
GO_REF:0000107
NCBI chr18:1,392,330...1,629,483
Ensembl chr18:1,392,725...1,628,067
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:18545679)
RGD
PMID:18545679
NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082
G
Ifitm3
interferon induced transmembrane protein 3
IEP
RGD
PMID:22021094
RGD:7495752
NCBI chr 1:205,540,649...205,541,758
Ensembl chr 1:196,111,043...196,112,203
G
Ift20
intraflagellar transport 20
acts_upstream_of_or_within
ISO IEA
(PMID:19654211) GO_REF:0000107
RGD Ensembl
PMID:19654211
GO_REF:0000107
NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:1859153 (PMID:19654211)
RGD
PMID:19654211
NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147
G
Itgb1
integrin subunit beta 1
acts_upstream_of_or_within
ISO
MGI:2154539 (PMID:9004034)
RGD
PMID:9004034
NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
G
Kdm6b
lysine demethylase 6B
involved_in
ISO IEA
(PMID:23856522) GO_REF:0000107
RGD Ensembl
PMID:23856522
GO_REF:0000107
NCBI chr10:54,619,520...54,641,014
Ensembl chr10:54,121,848...54,130,794
G
Mef2c
myocyte enhancer factor 2C
acts_upstream_of_or_within
ISO
MGI:102541|MGI:95664|MGI:97350 (PMID:19035347), (PMID:20691899)
RGD
PMID:19035347 PMID:20691899
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18297060) GO_REF:0000107
RGD Ensembl
PMID:18297060
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Myocd
myocardin
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:11439182) (PMID:14645532)
GO_Central RGD
PMID:11439182 PMID:14645532
GO_REF:0000033
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nkx2-5
NK2 homeobox 5
involved_in acts_upstream_of_or_within
IEP IEA ISO
GO_REF:0000107 (PMID:9857019) MGI:1857618|MGI:3655239|MGI:99458 (PMID:10021345), (PMID:17234970), (PMID:19035347)
Ensembl RGD
PMID:9857019 PMID:10021345 PMID:17234970 PMID:19035347 PMID:20486789
GO_REF:0000107, RGD:5131636
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nox4
NADPH oxidase 4
acts_upstream_of_or_within
ISO IEA
(PMID:16775014) GO_REF:0000107
RGD Ensembl
PMID:16775014
GO_REF:0000107
NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:140,901,097...141,077,406
G
Nrg1
neuregulin 1
involved_in
ISO
(PMID:17336907)
RGD
PMID:17336907
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:2136268|MGI:2445428 (PMID:12397115), (PMID:17234970)
RGD
PMID:12397115 PMID:17234970
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Sik1
salt-inducible kinase 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:20140255) GO_REF:0000107
UniProt RGD Ensembl
PMID:20140255
GO_REF:0000024 GO_REF:0000107
NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
G
Sirt6
sirtuin 6
involved_in
ISO IEA
(PMID:29555651) GO_REF:0000107
RGD Ensembl
PMID:29555651
GO_REF:0000107
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
G
Slc9a1
solute carrier family 9 member A1
acts_upstream_of_or_within
ISO IEA
(PMID:19011045) GO_REF:0000107
RGD Ensembl
PMID:19011045
GO_REF:0000107
NCBI chr 5:150,859,412...150,913,525
Ensembl chr 5:145,576,334...145,629,624
G
Sox6
SRY-box transcription factor 6
acts_upstream_of_or_within
ISO
(PMID:14530442)
RGD
PMID:14530442
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
G
Syne1
spectrin repeat containing nuclear envelope protein 1
IEP
RGD
PMID:25339194
RGD:13209018
NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:2655214 (PMID:17234970) GO_REF:0000107
RGD Ensembl
PMID:17234970
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within involved_in
ISO IEA
MGI:95664|MGI:99458 (PMID:20691899) GO_REF:0000107 (PMID:11431700)
RGD Ensembl
PMID:11431700 PMID:20691899
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Timm44
translocase of inner mitochondrial membrane 44
IEP
RGD
PMID:12388124
RGD:13463596
NCBI chr12:2,612,581...2,629,374
Ensembl chr12:2,612,581...2,629,351
G
Tsc1
TSC complex subunit 1
acts_upstream_of_or_within
ISO IEA
MGI:2183146 (PMID:11438694) GO_REF:0000107
RGD Ensembl
PMID:11438694
GO_REF:0000107
NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:11,979,729...12,015,674
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107
RGD Ensembl
PMID:19506109
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:22711842)
RGD
PMID:22711842
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:3710254 (PMID:18467625) GO_REF:0000107
RGD Ensembl
PMID:18467625
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Wnt3a
Wnt family member 3A
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:20559569) GO_REF:0000107 MGI:2143322 (PMID:21554246)
RGD Ensembl
PMID:20559569 PMID:21554246
GO_REF:0000107
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
G
Wt1
WT1 transcription factor
involved_in
ISO
(PMID:21654746)
RGD
PMID:21654746
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:18545679)
RGD
PMID:18545679
NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO IEA
(PMID:19620969) GO_REF:0000107
RGD Ensembl
PMID:19620969
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Itgb1
integrin subunit beta 1
acts_upstream_of_or_within
ISO
MGI:2154539 (PMID:9004034)
RGD
PMID:9004034
NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
G
Myocd
myocardin
involved_in
ISO
(PMID:15907818)
RGD
PMID:15907818
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20007915) GO_REF:0000107
RGD Ensembl
PMID:20007915
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Nrg1
neuregulin 1
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Rbm10
RNA binding motif protein 10
IEP
RGD
PMID:24178303
RGD:151667450
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:21311046)
RGD
PMID:21311046
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Rest
RE1-silencing transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:21199191)
UniProt RGD
PMID:21199191
GO_REF:0000024
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
G
Srf
serum response factor
involved_in
ISO IEA
UniProtKB:Q9JM73 (PMID:19783823) GO_REF:0000107 UniProtKB:P11831 (PMID:19783823)
RGD Ensembl
PMID:19783823
GO_REF:0000107
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15459098) GO_REF:0000107
RGD Ensembl
PMID:15459098
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbxt
T-box transcription factor T
involved_in
ISO IEA
(PMID:21632880) GO_REF:0000107
RGD Ensembl
PMID:21632880
GO_REF:0000107
NCBI chr 1:54,845,674...54,859,340
Ensembl chr 1:52,298,099...52,305,864
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
IEP
RGD
PMID:2447874
RGD:151665807
NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065
G
Arid2
AT-rich interaction domain 2
acts_upstream_of_or_within
ISO IEA
MGI:4433303 (PMID:25299188) GO_REF:0000107
RGD Ensembl
PMID:25299188
GO_REF:0000107
NCBI chr 7:129,326,371...129,443,813
Ensembl chr 7:127,447,278...127,563,512
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:15073151)
Ensembl RGD
PMID:15073151
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Csf1r
colony stimulating factor 1 receptor
IEP
RGD
PMID:2447874
RGD:151665807
NCBI chr18:56,834,152...56,860,804
Ensembl chr18:54,546,659...54,590,415
G
Cxadr
CXADR, Ig-like cell adhesion molecule
acts_upstream_of
ISO
MGI:3711226 (PMID:16543498)
RGD
PMID:16543498
NCBI chr11:16,982,864...17,030,078
Ensembl chr11:16,982,860...17,030,046
G
Dipk2a
divergent protein kinase domain 2A
involved_in
ISO
(PMID:23784961)
RGD
PMID:23784961
NCBI chr 8:95,070,695...95,089,815
Ensembl chr 8:95,030,279...95,089,815
G
Fes
FES proto-oncogene, tyrosine kinase
IEP
RGD
PMID:2447874
RGD:151665807
NCBI chr 1:134,337,698...134,346,934
Ensembl chr 1:134,337,698...134,346,934
G
Fgf9
fibroblast growth factor 9
acts_upstream_of
ISO
MGI:2135961|MGI:95522|MGI:95523 (PMID:15621532), (PMID:16778080)
RGD
PMID:15621532 PMID:16778080
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of
ISO IEA
MGI:104723|MGI:95523 (PMID:15621532), (PMID:16778080) GO_REF:0000107
RGD Ensembl
PMID:15621532 PMID:16778080
GO_REF:0000107
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of
ISO
MGI:104723|MGI:95522 (PMID:15621532), (PMID:16778080)
RGD
PMID:15621532 PMID:16778080
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO IEA
MGI:1347481 (PMID:16839542) GO_REF:0000107
RGD Ensembl
PMID:16839542
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (PMID:16839542)
RGD
PMID:16839542
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
G
Gata4
GATA binding protein 4
acts_upstream_of
ISO
MGI:102541 (PMID:19084512)
RGD
PMID:19084512
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gata6
GATA binding protein 6
acts_upstream_of
ISO
MGI:102541 (PMID:19084512)
RGD
PMID:19084512
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Hdac2
histone deacetylase 2
acts_upstream_of
ISO
MGI:3712002 (PMID:17322895)
RGD
PMID:17322895
NCBI chr20:42,101,815...42,126,486
Ensembl chr20:40,548,250...40,571,609
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of
ISO IEA
MGI:2447620 (PMID:17332425) GO_REF:0000107
RGD Ensembl
PMID:17332425
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Jarid2
jumonji and AT-rich interaction domain containing 2
acts_upstream_of
ISO
MGI:1856923 (PMID:15870077)
RGD
PMID:15870077
NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
G
Kras
KRAS proto-oncogene, GTPase
IEP
RGD
PMID:2447874
RGD:151665807
NCBI chr 4:179,916,255...179,949,613
G
Mapk11
mitogen-activated protein kinase 11
acts_upstream_of
ISO IEA
MGI:3609429 (PMID:21768366) GO_REF:0000107
RGD Ensembl
PMID:21768366
GO_REF:0000107
NCBI chr 7:122,098,120...122,105,023
Ensembl chr 7:120,218,478...120,225,395
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
MGI:2386445 (PMID:12893741) GO_REF:0000107
RGD Ensembl
PMID:12893741
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:109452 (PMID:17350578) GO_REF:0000107
RGD Ensembl
PMID:17350578
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Prkar1a
protein kinase cAMP-dependent type I regulatory subunit alpha
acts_upstream_of_or_within
ISO
MGI:2182091|MGI:3512112 (PMID:18316483)
RGD
PMID:18316483
NCBI chr10:95,120,537...95,139,028
Ensembl chr10:94,620,039...94,639,041
G
Rxra
retinoid X receptor alpha
acts_upstream_of_or_within
ISO
MGI:2136274|MGI:98215 (PMID:9428411)
RGD
PMID:9428411
NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712
G
Rxrb
retinoid X receptor beta
acts_upstream_of_or_within
ISO
MGI:98214 (PMID:9428411)
RGD
PMID:9428411
NCBI chr20:4,818,707...4,824,968
Ensembl chr20:4,816,815...4,828,773
G
Sav1
salvador family WW domain containing protein 1
acts_upstream_of
ISO IEA
MGI:2654594|MGI:4430538 (PMID:21512031) GO_REF:0000107
RGD Ensembl
PMID:21512031
GO_REF:0000107
NCBI chr 6:94,214,514...94,236,354
Ensembl chr 6:88,478,539...88,499,968
G
Ski
Ski proto-oncogene
IEP
RGD
PMID:2447874
RGD:151665807
NCBI chr 5:170,995,851...171,064,957
Ensembl chr 5:165,714,093...165,782,733
G
Smad1
SMAD family member 1
acts_upstream_of_or_within
ISO IEA
MGI:97350 (PMID:17350578) GO_REF:0000107
RGD Ensembl
PMID:17350578
GO_REF:0000107
NCBI chr19:45,417,430...45,477,962
Ensembl chr19:28,513,131...28,573,651
G
Tbx5
T-box transcription factor 5
acts_upstream_of
ISO IEA
MGI:107516|MGI:95664 (PMID:19084512) GO_REF:0000107
RGD Ensembl
PMID:19084512
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tenm4
teneurin transmembrane protein 4
acts_upstream_of_or_within
ISO
MGI:3655239 (PMID:17350578)
RGD
PMID:17350578
NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15896309)
UniProt Ensembl RGD
PMID:15896309
GO_REF:0000024 GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:12773577)
RGD
PMID:12773577
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Wnt2
Wnt family member 2
acts_upstream_of
ISO
MGI:4361155 (PMID:20159597)
RGD
PMID:20159597
NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:46,333,998...46,374,402
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Neb
nebulin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:36,613,677...36,811,618
Ensembl chr 3:36,613,716...36,811,574
G
Nebl
nebulette
involved_in
ISS IEA IBA ISO
GO_REF:0000024 GO_REF:0000107 GO_REF:0000033 (PMID:11822876), (PMID:18823973)
UniProt Ensembl GO_Central RGD
PMID:11822876 PMID:18823973
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr17:80,113,891...80,466,331
Ensembl chr17:80,118,543...80,466,210
G
Nrap
nebulin-related anchoring protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:265,355,324...265,433,229
Ensembl chr 1:255,350,113...255,427,693
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO IEA
(PMID:9892670) GO_REF:0000107
RGD Ensembl
PMID:9892670
GO_REF:0000107
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
G
Bmp5
bone morphogenetic protein 5
involved_in
ISO IEA
UniProtKB:P23359 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO IEA
UniProtKB:P49003 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
G
Bmpr2
bone morphogenetic protein receptor type 2
NOT|involved_in
ISO
(PMID:19409885)
RGD
PMID:19409885
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Csrp3
cysteine and glycine rich protein 3
acts_upstream_of_or_within
ISO IEA
MGI:97622 (PMID:10555147) GO_REF:0000107
RGD Ensembl
PMID:10555147
GO_REF:0000107
NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:107516 (PMID:20705924)
RGD
PMID:20705924
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gata6
GATA binding protein 6
acts_upstream_of_or_within
ISO
MGI:95664 (PMID:20705924)
RGD
PMID:20705924
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Gjc1
gap junction protein, gamma 1
acts_upstream_of_or_within
ISO
MGI:2177600|MGI:3608701 (PMID:14681043)
RGD
PMID:14681043
NCBI chr10:88,262,840...88,285,646
Ensembl chr10:87,760,528...87,785,867
G
Hspg2
heparan sulfate proteoglycan 2
acts_upstream_of_or_within
ISO
MGI:1934892 (PMID:10579729)
RGD
PMID:10579729
NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
G
Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO IEA
MGI:1856965 (PMID:21628317) GO_REF:0000107
RGD Ensembl
PMID:21628317
GO_REF:0000107
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
G
Mrtfb
myocardin related transcription factor B
acts_upstream_of_or_within
ISO
MGI:3587937 (PMID:17183527)
RGD
PMID:17183527
NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within
ISO IEA
MGI:3850506 (PMID:25139234) GO_REF:0000107
RGD Ensembl
PMID:25139234
GO_REF:0000107
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
G
Mybpc1
myosin binding protein C1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:22,930,350...23,015,981
Ensembl chr 7:22,930,350...23,015,957
G
Myl7
myosin light chain 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:80,780,684...80,783,259
Ensembl chr14:80,779,776...80,783,244
G
Ndufv2
NADH:ubiquinone oxidoreductase core subunit V2
involved_in
ISO
(PMID:12754703)
RGD
PMID:12754703
NCBI chr 9:105,690,454...105,710,669
Ensembl chr 9:105,690,455...105,710,713
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:1927227 (PMID:7628699) GO_REF:0000107
RGD Ensembl
PMID:7628699
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nprl3
NPR3-like, GATOR1 complex subunit
acts_upstream_of_or_within
ISO IEA
MGI:5426855 (PMID:22538705) GO_REF:0000107
RGD Ensembl
PMID:22538705
GO_REF:0000107
NCBI chr10:15,859,739...15,900,261
Ensembl chr10:15,355,355...15,395,810
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
(PMID:24364879)
RGD
PMID:24364879
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:2445429 (PMID:16836994)
RGD
PMID:16836994
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Pln
phospholamban
acts_upstream_of_or_within
ISO IEA
MGI:1330824 (PMID:10555147) GO_REF:0000107
RGD Ensembl
PMID:10555147
GO_REF:0000107
NCBI chr20:33,166,512...33,182,241
G
Prmt1
protein arginine methyltransferase 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:30321814)
UniProt Ensembl RGD
PMID:30321814
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:95,458,850...95,468,345
G
Pten
phosphatase and tensin homolog
acts_upstream_of_or_within
ISO
MGI:2136412|MGI:2182005 (PMID:16107612)
RGD
PMID:16107612
NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
G
Rbp4
retinol binding protein 4
involved_in
ISO
(PMID:12663486)
RGD
PMID:12663486
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Sgcd
sarcoglycan, delta
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840
G
Sgcg
sarcoglycan, gamma
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:35,388,836...35,435,072
Ensembl chr15:35,386,534...35,435,148
G
Sgcz
sarcoglycan zeta
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:53,660,283...54,740,811
Ensembl chr16:53,660,502...54,735,193
G
Sin3b
SIN3 transcription regulator family member B
involved_in
ISO
(PMID:10620510)
RGD
PMID:10620510
NCBI chr16:17,157,352...17,194,051
Ensembl chr16:17,123,434...17,159,978
G
Tbx2
T-box transcription factor 2
acts_upstream_of_or_within
ISO IEA
MGI:3505715 (PMID:15459098) GO_REF:0000107
RGD Ensembl
PMID:15459098
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Zfpm2
zinc finger protein, multitype 2
acts_upstream_of_or_within
ISO IEA
MGI:3587413 (PMID:16103912) GO_REF:0000107
RGD Ensembl
PMID:16103912
GO_REF:0000107
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ccm2l
CCM2 like scaffold protein
acts_upstream_of_or_within
ISO
MGI:1924696 (PMID:22898778)
RGD
PMID:22898778
NCBI chr 3:141,533,470...141,549,136
Ensembl chr 3:141,533,511...141,549,140
G
Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:2385159 (PMID:22898778)
RGD
PMID:22898778
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
S1pr1
sphingosine-1-phosphate receptor 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:21668976)
UniProt Ensembl RGD
PMID:21668976
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:206,309,715...206,314,070
Ensembl chr 2:203,621,587...203,629,681
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actc1
actin, alpha, cardiac muscle 1
acts_upstream_of_or_within
ISO IEA
MGI:2180072 (PMID:14605248) GO_REF:0000107
RGD Ensembl
PMID:14605248
GO_REF:0000107
NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
G
Ankrd1
ankyrin repeat domain 1
involved_in
ISO IEA
(PMID:19525294), (PMID:19608030) GO_REF:0000107
RGD Ensembl
PMID:19525294 PMID:19608030
GO_REF:0000107
NCBI chr 1:243,228,460...243,237,014
Ensembl chr 1:233,815,851...233,834,919
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3583785 (PMID:16314491) GO_REF:0000107
RGD Ensembl
PMID:16314491
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Egln1
egl-9 family hypoxia-inducible factor 1
acts_upstream_of_or_within
ISO
MGI:3690045 (PMID:16966370)
RGD
PMID:16966370
NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
G
Lrp6
LDL receptor related protein 6
acts_upstream_of
ISO
MGI:98958 (PMID:19056682)
RGD
PMID:19056682
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
G
Mylk2
myosin light chain kinase 2
involved_in
ISO IBA IEA
(PMID:16448786) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:16448786
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:11889119) GO_REF:0000107 (PMID:21640717)
RGD Ensembl
PMID:11889119 PMID:21640717
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20007915) GO_REF:0000107
RGD Ensembl
PMID:20007915
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tcap
titin-cap
involved_in
ISO IBA
(PMID:9817758) GO_REF:0000033
RGD GO_Central
PMID:9817758
GO_REF:0000033
NCBI chr10:83,878,006...83,879,174
Ensembl chr10:83,381,719...83,382,887
G
Ttn
titin
involved_in acts_upstream_of_or_within
ISO
(PMID:9817758) MGI:3763610 (PMID:17360664)
RGD
PMID:9817758 PMID:17360664
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
G
Xirp2
xin actin-binding repeat containing 2
acts_upstream_of_or_within
ISO
MGI:4453315 (PMID:20360251)
RGD
PMID:20360251
NCBI chr 3:72,534,175...72,621,056
Ensembl chr 3:51,870,092...52,213,091
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actc1
actin, alpha, cardiac muscle 1
acts_upstream_of_or_within
ISO IEA
MGI:2180072 (PMID:9114002) GO_REF:0000107
RGD Ensembl
PMID:9114002
GO_REF:0000107
NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
G
Adprhl1
ADP-ribosylhydrolase like 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr16:76,283,186...76,315,075
Ensembl chr16:76,283,103...76,354,440
G
Csrp3
cysteine and glycine rich protein 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:12507422)
Ensembl RGD
PMID:12507422
GO_REF:0000107
NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
G
Fhod3
formin homology 2 domain containing 3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:5440613 (PMID:23213483)
GO_Central RGD
PMID:23213483
GO_REF:0000033
NCBI chr18:15,993,079...16,425,796
Ensembl chr18:15,993,324...16,425,796
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
MGI:2386445 (PMID:9356462) GO_REF:0000107
RGD Ensembl
PMID:9356462
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Myl2
myosin light chain 2
acts_upstream_of_or_within
ISO
MGI:2385922 (PMID:9422794)
RGD
PMID:9422794
NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
G
Mylk3
myosin light chain kinase 3
involved_in
IMP IBA
PMID:17885681 GO_REF:0000033
GO_Central
PMID:17885681
GO_REF:0000033, RGD:8554371
NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954
G
Pdgfra
platelet derived growth factor receptor alpha
involved_in
IEA ISO ISS
GO_REF:0000107 UniProtKB:P05622 (PMID:11239463) GO_REF:0000024
Ensembl RGD UniProt
PMID:11239463
GO_REF:0000024 GO_REF:0000107
NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,005,839...33,054,335
G
Pdgfrb
platelet derived growth factor receptor beta
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:P26618 (PMID:11239463)
UniProt RGD
PMID:11239463
GO_REF:0000024
NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843
G
Srf
serum response factor
acts_upstream_of_or_within
ISO IEA
MGI:3522206|MGI:3522214 (PMID:15569937) GO_REF:0000107
RGD Ensembl
PMID:15569937
GO_REF:0000107
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
G
Tcap
titin-cap
involved_in
ISO IBA
(PMID:9817758) GO_REF:0000033
RGD GO_Central
PMID:9817758
GO_REF:0000033
NCBI chr10:83,878,006...83,879,174
Ensembl chr10:83,381,719...83,382,887
G
Ttn
titin
involved_in acts_upstream_of_or_within
ISO
(PMID:11846417), (PMID:9817758) MGI:3654306 (PMID:16702235)
RGD
PMID:9817758 PMID:11846417 PMID:16702235
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2179740 (PMID:11694877)
RGD
PMID:11694877
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO IEA
MGI:1346859 (PMID:18952847) GO_REF:0000107
RGD Ensembl
PMID:18952847
GO_REF:0000107
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:18952847)
RGD
PMID:18952847
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589208 (PMID:21098571)
RGD
PMID:21098571
NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
ISO IEA
(PMID:19008477) GO_REF:0000107
RGD Ensembl
PMID:19008477
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO IEA
(PMID:19609448) GO_REF:0000107
RGD Ensembl
PMID:19609448
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107
NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (PMID:18539270)
RGD
PMID:18539270
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ankrd11
ankyrin repeat domain containing 11
acts_upstream_of_or_within
ISO
(PMID:38951500)
RGD
PMID:38951500
NCBI chr19:67,848,836...68,007,491
Ensembl chr19:50,940,299...51,098,962
G
Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (PMID:19705442)
RGD
PMID:19705442
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cdc42
cell division cycle 42
involved_in
ISO
(PMID:31219639)
RGD
PMID:31219639
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
G
Edn1
endothelin 1
involved_in
ISO IEA
(PMID:31219639) GO_REF:0000107
RGD Ensembl
PMID:31219639
GO_REF:0000107
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:2687362 (PMID:31219639)
Ensembl RGD
PMID:31219639
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Folr1
folate receptor alpha
involved_in
ISO IEA
(PMID:17286298) GO_REF:0000107
RGD Ensembl
PMID:17286298
GO_REF:0000107
NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:2386570|MGI:3803647 (PMID:20144608) GO_REF:0000107
RGD Ensembl
PMID:20144608
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Nrp1
neuropilin 1
NOT|involved_in
ISO
(PMID:26053665)
RGD
PMID:26053665
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
G
Pitx2
paired-like homeodomain 2
involved_in
ISO
(PMID:12464179)
RGD
PMID:12464179
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (PMID:18539270)
RGD
PMID:18539270
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Vcam1
vascular cell adhesion molecule 1
IMP
RGD
PMID:12486170
RGD:628409
NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:204,038,114...204,057,958
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO IEA
MGI:6358100 (PMID:29666184) GO_REF:0000107
RGD Ensembl
PMID:29666184
GO_REF:0000107
NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603
G
Shox2
SHOX homeobox 2
involved_in
ISO IEA
(PMID:19166829) GO_REF:0000107
RGD Ensembl
PMID:19166829
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20007915) GO_REF:0000107
RGD Ensembl
PMID:20007915
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Shox2
SHOX homeobox 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19166829)
Ensembl RGD
PMID:19166829
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hand1
heart and neural crest derivatives expressed 1
involved_in
ISO IEA
(PMID:18276607) GO_REF:0000107
RGD Ensembl
PMID:18276607
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:11076755)
Ensembl RGD
PMID:11076755
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO IEA
MGI:1933835|MGI:2447758 (PMID:19620969) GO_REF:0000107
RGD Ensembl
PMID:19620969
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Smarcd3
SWI/SNF related BAF chromatin remodeling complex subunit D3
acts_upstream_of_or_within
ISO IEA
MGI:2148567 (PMID:17519332) GO_REF:0000107
RGD Ensembl
PMID:17519332
GO_REF:0000107
NCBI chr 4:11,441,142...11,472,781
Ensembl chr 4:10,548,751...10,580,326
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18924235)
RGD
PMID:18924235
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Foxh1
forkhead box H1
involved_in
ISO IEA
(PMID:15363409) GO_REF:0000107
RGD Ensembl
PMID:15363409
GO_REF:0000107
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Gata3
GATA binding protein 3
involved_in
ISO IEA
(PMID:18955134) GO_REF:0000107
RGD Ensembl
PMID:18955134
GO_REF:0000107
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Gata4
GATA binding protein 4
involved_in
ISO
(PMID:17643447)
RGD
PMID:17643447
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q02248 (PMID:17519333)
Ensembl RGD
PMID:17519333
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107
NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209
G
Ppp1r13l
protein phosphatase 1, regulatory subunit 13 like
acts_upstream_of_or_within
ISO IEA
MGI:3575541 (PMID:15661756) GO_REF:0000107
RGD Ensembl
PMID:15661756
GO_REF:0000107
NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712
G
Sema3c
semaphorin 3C
involved_in
ISO IEA
(PMID:19666519) GO_REF:0000107
RGD Ensembl
PMID:19666519
GO_REF:0000107
NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:16109771)
RGD
PMID:16109771
NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts6
ADAM metallopeptidase with thrombospondin type 1 motif, 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
G
Ap2b1
adaptor related protein complex 2 subunit beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:68,596,925...68,702,547
Ensembl chr10:68,099,547...68,205,013
G
Cntrl
centriolin
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 3:18,428,147...18,500,362
Ensembl chr 3:18,428,103...18,500,380
G
Cplane1
ciliogenesis and planar polarity effector complex subunit 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
G
Fuz
fuzzy planar cell polarity protein
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:104,515,782...104,524,591
Ensembl chr 1:95,379,587...95,384,530
G
Gata4
GATA binding protein 4
involved_in
ISO
UniProtKB:P97471 (PMID:21330551)
RGD
PMID:21330551
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Kif7
kinesin family member 7
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:133,639,487...133,658,539
Ensembl chr 1:133,640,065...133,658,576
G
Lrp1
LDL receptor related protein 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:63,380,356...63,460,910
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Ndst1
N-deacetylase and N-sulfotransferase 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
G
Pcsk5
proprotein convertase subtilisin/kexin type 5
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:224,263,823...224,694,350
Ensembl chr 1:214,837,927...215,267,600
G
Pde2a
phosphodiesterase 2A
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
G
Plxnd1
plexin D1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Prdm1
PR/SET domain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488
G
Smad4
SMAD family member 4
involved_in
ISO IEA
UniProtKB:Q08369 (PMID:21330551) GO_REF:0000107
RGD Ensembl
PMID:21330551
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
G
Snx17
sorting nexin 17
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 6:30,897,500...30,902,972
Ensembl chr 6:25,177,391...25,183,030
G
Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 7:113,556,157...113,587,351
Ensembl chr 7:111,686,371...111,707,058
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Zbtb14
zinc finger and BTB domain containing 14
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:109,333,440...109,338,646
Ensembl chr 9:109,331,028...109,338,632
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp5
bone morphogenetic protein 5
involved_in
ISO IEA
UniProtKB:P23359 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO IEA
UniProtKB:P49003 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO IEA
MGI:2450311|MGI:4433295 (PMID:26102480) GO_REF:0000107
RGD Ensembl
PMID:26102480
GO_REF:0000107
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2179740 (PMID:11694877)
RGD
PMID:11694877
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Dhrs3
dehydrogenase/reductase 3
acts_upstream_of_or_within
ISO IEA
MGI:5007106 (PMID:24005908) GO_REF:0000107
RGD Ensembl
PMID:24005908
GO_REF:0000107
NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417
G
Dnah11
dynein, axonemal, heavy chain 11
acts_upstream_of_or_within
ISO
MGI:4821828 (PMID:27340223)
RGD
PMID:27340223
NCBI chr 6:144,982,130...145,298,523
Ensembl chr 6:138,839,177...139,155,536
G
Hand1
heart and neural crest derivatives expressed 1
involved_in
ISO IEA
(PMID:19586923) GO_REF:0000107
RGD Ensembl
PMID:19586923
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:17259303)
RGD
PMID:17259303
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:17259303) GO_REF:0000107
RGD Ensembl
PMID:17259303
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:3823090 (PMID:19036983)
RGD
PMID:19036983
NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107
NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934|MGI:98834 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Mks1
MKS transition zone complex subunit 1
acts_upstream_of_or_within
ISO IEA
MGI:4821832 (PMID:27340223) GO_REF:0000107
RGD Ensembl
PMID:27340223
GO_REF:0000107
NCBI chr10:73,152,599...73,167,451
Ensembl chr10:72,655,921...72,666,655
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:16510504) GO_REF:0000107
RGD Ensembl
PMID:16510504
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20007915) GO_REF:0000107
RGD Ensembl
PMID:20007915
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Tp53
tumor protein p53
acts_upstream_of_or_within
ISO IEA
MGI:107934|MGI:96952 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:2447620 (PMID:20619341) GO_REF:0000107
RGD Ensembl
PMID:20619341
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:18093989)
RGD
PMID:18093989
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gata6
GATA binding protein 6
involved_in
ISO
(PMID:11889139), (PMID:12615657)
RGD
PMID:11889139 PMID:12615657
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18297060) GO_REF:0000107
RGD Ensembl
PMID:18297060
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Mir143
microRNA 143
acts_upstream_of_or_within
ISO
MGI:2676830 (PMID:19816508)
RGD
PMID:19816508
NCBI chr18:57,371,349...57,371,453
Ensembl chr18:55,101,006...55,101,110
G
Mir145
microRNA 145
acts_upstream_of_or_within
ISO
MGI:2676828 (PMID:19816508)
RGD
PMID:19816508
NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727
G
Myocd
myocardin
involved_in
IDA
PMID:16151017
BHF-UCL
PMID:16151017
RGD:8554320
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Srf
serum response factor
acts_upstream_of_or_within
ISO IEA
MGI:3522206|MGI:3522214 (PMID:15569937) GO_REF:0000107
RGD Ensembl
PMID:15569937
GO_REF:0000107
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Greb1l
GREB1 like retinoic acid receptor coactivator
acts_upstream_of_or_within
ISO IEA
(PMID:29100091) GO_REF:0000107
RGD Ensembl
PMID:29100091
GO_REF:0000107
NCBI chr18:1,392,330...1,629,483
Ensembl chr18:1,392,725...1,628,067
G
Kcnk2
potassium two pore domain channel subfamily K member 2
IEP
RGD
PMID:24705172
RGD:9831164
NCBI chr13:103,297,387...103,494,686
Ensembl chr13:100,766,113...100,963,435
G
Map3k8
mitogen-activated protein kinase kinase kinase 8
IEP
RGD
PMID:9779826
RGD:70317
NCBI chr17:58,078,175...58,098,455
Ensembl chr17:53,383,131...53,403,216
G
Myocd
myocardin
acts_upstream_of_or_within
ISO
MGI:3052940 (PMID:21357509)
RGD
PMID:21357509
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
IEP
RGD
PMID:10861850
RGD:633878
NCBI chr10:36,856,534...36,878,789
Ensembl chr10:36,358,101...36,377,862
G
Ptbp1
polypyrimidine tract binding protein 1
IEP
RGD
PMID:19590510
RGD:10045962
NCBI chr 7:10,493,199...10,502,957
Ensembl chr 7:9,842,574...9,852,397
G
Scn5a
sodium voltage-gated channel alpha subunit 5
acts_upstream_of_or_within
ISO
MGI:2179753 (PMID:11972032)
RGD
PMID:11972032
NCBI chr 8:128,098,613...128,196,515
Ensembl chr 8:119,220,905...119,318,769
G
Tmem65
transmembrane protein 65
involved_in
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:26403541)
GO_Central Ensembl RGD
PMID:26403541
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:90,336,997...90,378,930
Ensembl chr 7:90,274,142...90,379,474
G
Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO IEA
MGI:2180033 (PMID:11923874) GO_REF:0000107
RGD Ensembl
PMID:11923874
GO_REF:0000107
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mef2c
myocyte enhancer factor 2C
acts_upstream_of_or_within involved_in
ISO
MGI:97350 (PMID:19035347) (PMID:16680724)
RGD
PMID:16680724 PMID:19035347
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18297060) GO_REF:0000107
RGD Ensembl
PMID:18297060
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:99458 (PMID:19035347) GO_REF:0000107
RGD Ensembl
PMID:19035347
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
(PMID:15466159) GO_REF:0000107
RGD Ensembl
PMID:15466159
GO_REF:0000107
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Grhl2
grainyhead-like transcription factor 2
acts_upstream_of_or_within
ISO IEA
MGI:4942413 (PMID:21377456) GO_REF:0000107
RGD Ensembl
PMID:21377456
GO_REF:0000107
NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:16199874) GO_REF:0000107
RGD Ensembl
PMID:16199874
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
(PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO IEA
MGI:1857719 (PMID:9436976) GO_REF:0000107
RGD Ensembl
PMID:9436976
GO_REF:0000107
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
(PMID:16510504) GO_REF:0000107
RGD Ensembl
PMID:16510504
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Eomes
eomesodermin
acts_upstream_of_or_within
ISO IEA
MGI:3774028 (PMID:21822279) GO_REF:0000107
RGD Ensembl
PMID:21822279
GO_REF:0000107
NCBI chr 8:127,059,215...127,067,070
Ensembl chr 8:118,181,777...118,188,316
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA ISS
(PMID:15896309) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:15896309
GO_REF:0000024 GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mesp1
mesoderm posterior bHLH transcription factor 1
acts_upstream_of_or_within
ISO IEA
MGI:2182080 (PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:19736317) GO_REF:0000107 (PMID:15110716)
RGD Ensembl
PMID:15110716 PMID:19736317
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Sox17
SRY-box transcription factor 17
involved_in
ISO IEA
(PMID:21305474) GO_REF:0000107
RGD Ensembl
PMID:21305474
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Flrt2
fibronectin leucine rich transmembrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:21350012)
UniProt RGD
PMID:21350012
GO_REF:0000024
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adra1a
adrenoceptor alpha 1A
acts_upstream_of_or_within
ISO
MGI:104774 (PMID:12782680)
RGD
PMID:12782680
NCBI chr15:45,005,648...45,111,416
Ensembl chr15:40,832,534...40,927,500
G
Adra1b
adrenoceptor alpha 1B
acts_upstream_of_or_within
ISO
MGI:104773 (PMID:12782680)
RGD
PMID:12782680
NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,255,025...28,312,919
G
Agt
angiotensinogen
IDA
RGD
PMID:21376054
RGD:5129173
NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
G
Agtr2
angiotensin II receptor, type 2
IMP
RGD
PMID:21173078
RGD:6903878
NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057
G
Akap13
A-kinase anchoring protein 13
IMP
RGD
PMID:18951085
RGD:2312638
NCBI chr 1:138,722,445...139,029,401
Ensembl chr 1:129,314,402...129,619,646
G
Ang2
angiogenin, ribonuclease A family, member 2
acts_upstream_of_or_within
ISO
(PMID:29065170)
RGD
PMID:29065170
NCBI chr15:24,398,330...24,415,909
Ensembl chr15:24,398,419...24,398,922
G
Camk2d
calcium/calmodulin-dependent protein kinase II delta
IMP
RGD
PMID:21554860
RGD:6907064
NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178
G
Gata4
GATA binding protein 4
IDA
RGD
PMID:20971938
RGD:5131529
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gsk3b
glycogen synthase kinase 3 beta
IDA
RGD
PMID:27854077
RGD:13792737
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
G
Map2k4
mitogen activated protein kinase kinase 4
IMP
RGD
PMID:9769323
RGD:7495831
NCBI chr10:50,842,348...50,947,063
Ensembl chr10:50,344,915...50,447,993
G
Meis1
Meis homeobox 1
IMP
RGD
PMID:26597775
RGD:11554891
NCBI chr14:97,356,949...97,499,646
Ensembl chr14:93,155,419...93,294,265
G
Myl2
myosin light chain 2
IEP
RGD
PMID:7657802
RGD:1580138
NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
G
Myocd
myocardin
IMP
RGD
PMID:18772130
RGD:5132877
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nppa
natriuretic peptide A
IEP
RGD
PMID:7657802
RGD:1580138
NCBI chr 5:163,712,184...163,713,493
Ensembl chr 5:158,429,042...158,430,351
G
Nppb
natriuretic peptide B
IEP
RGD
PMID:7657802
RGD:1580138
NCBI chr 5:163,699,955...163,701,314
Ensembl chr 5:158,416,866...158,418,168
G
Pdlim5
PDZ and LIM domain 5
involved_in
IGI
PMID:24743145
BHF-UCL
PMID:24743145
RGD:10054083
NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
G
Prkg1
protein kinase cGMP-dependent 1
IMP
RGD
PMID:19542178
RGD:7775063
NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080
G
Sorbs2
sorbin and SH3 domain containing 2
involved_in
IGI
PMID:24743145
BHF-UCL
PMID:24743145
RGD:10054083
NCBI chr16:46,435,220...46,748,743
Ensembl chr16:46,435,237...46,626,514
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Pdgfrb
platelet derived growth factor receptor beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:14624252)
UniProt RGD
PMID:14624252
GO_REF:0000024
NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mir1
microRNA 1
involved_in
ISO
(PMID:23625462)
RGD
PMID:23625462
NCBI chr18:2,160,327...2,160,413
G
Mir1a-1
microRNA 1a-1
involved_in
ISO
(PMID:23625462)
RGD
PMID:23625462
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dchs1
dachsous cadherin-related 1
involved_in
ISO IEA
(PMID:26258302) GO_REF:0000107
RGD Ensembl
PMID:26258302
GO_REF:0000107
NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:160,104,931...160,124,808
G
Eng
endoglin
acts_upstream_of_or_within
ISO
MGI:2177824 (PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20890042) GO_REF:0000107
RGD Ensembl
PMID:20890042
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:18663143)
RGD
PMID:18663143
NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ndrg4
NDRG family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:24048452)
Ensembl RGD
PMID:24048452
GO_REF:0000107
NCBI chr19:9,351,408...9,387,398
Ensembl chr19:9,351,404...9,386,914
G
Popdc1
popeye domain cAMP effector 1
involved_in
ISO
(PMID:24048452)
RGD
PMID:24048452
NCBI chr20:48,819,241...48,860,282
Ensembl chr20:48,822,308...48,857,472
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfbr2
transforming growth factor, beta receptor 2
NOT|involved_in
ISO
(PMID:20652948)
RGD
PMID:20652948
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Sox9
SRY-box transcription factor 9
acts_upstream_of
ISO IEA
MGI:2385468|MGI:2450311 (PMID:17350610) GO_REF:0000107
RGD Ensembl
PMID:17350610
GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:20804746)
RGD
PMID:20804746
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:2386570|MGI:3803647 (PMID:20144608) GO_REF:0000107
RGD Ensembl
PMID:20144608
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:2445429 (PMID:16836994)
RGD
PMID:16836994
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (PMID:18667074)
RGD
PMID:18667074
NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966
G
Msx2
msh homeobox 2
acts_upstream_of_or_within
ISO IEA
MGI:97168 (PMID:18667074) GO_REF:0000107
RGD Ensembl
PMID:18667074
GO_REF:0000107
NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ahr
aryl hydrocarbon receptor
involved_in
ISO
(PMID:14644620)
RGD
PMID:14644620
NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Arid2
AT-rich interaction domain 2
acts_upstream_of_or_within
ISO IEA
MGI:4433303 (PMID:25299188) GO_REF:0000107
RGD Ensembl
PMID:25299188
GO_REF:0000107
NCBI chr 7:129,326,371...129,443,813
Ensembl chr 7:127,447,278...127,563,512
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:3715149|MGI:4838016 (PMID:21350214) GO_REF:0000107
RGD Ensembl
PMID:21350214
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Nrp1
neuropilin 1
involved_in
ISO IEA
(PMID:23639442) GO_REF:0000107
RGD Ensembl
PMID:23639442
GO_REF:0000107
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
G
Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190 (PMID:18583714)
UniProt RGD
PMID:18583714
GO_REF:0000024
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:18093989)
RGD
PMID:18093989
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:26491108) GO_REF:0000107
RGD Ensembl
PMID:26491108
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Abcc9
ATP binding cassette subfamily C member 9
acts_upstream_of_or_within
ISO
MGI:1100508 (PMID:31821173)
RGD
PMID:31821173
NCBI chr 4:177,262,848...177,386,837
Ensembl chr 4:175,532,547...175,655,356
G
Adamts6
ADAM metallopeptidase with thrombospondin type 1 motif, 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
G
Ap2b1
adaptor related protein complex 2 subunit beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:68,596,925...68,702,547
Ensembl chr10:68,099,547...68,205,013
G
Apela
apelin receptor early endogenous ligand
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28890073)
UniProt Ensembl RGD
PMID:28890073
GO_REF:0000024 GO_REF:0000107
NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465
G
Apln
apelin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28890073)
UniProt Ensembl RGD
PMID:28890073
GO_REF:0000024 GO_REF:0000107
NCBI chr X:132,058,739...132,091,518
Ensembl chr X:127,203,823...127,213,391
G
Aplnr
apelin receptor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:23603510), (PMID:28890073)
UniProt Ensembl RGD
PMID:23603510 PMID:28890073
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15070745)
Ensembl RGD
PMID:15070745
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Cfc1
cripto, FRL-1, cryptic family 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:44,234,997...44,247,846
Ensembl chr 9:36,739,071...36,751,930
G
Cntrl
centriolin
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 3:18,428,147...18,500,362
Ensembl chr 3:18,428,103...18,500,380
G
Cplane1
ciliogenesis and planar polarity effector complex subunit 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
G
Dctn5
dynactin subunit 5
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:176,689,176...176,705,907
Ensembl chr 1:176,689,156...176,705,906
G
Dnm2
dynamin 2
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:28,254,344...28,336,297
Ensembl chr 8:19,978,400...20,060,157
G
Dync2h1
dynein cytoplasmic 2 heavy chain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 8:12,473,955...12,697,075
Ensembl chr 8:4,189,257...4,412,183
G
Fuz
fuzzy planar cell polarity protein
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:104,515,782...104,524,591
Ensembl chr 1:95,379,587...95,384,530
G
Gpc3
glypican 3
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2159355 (PMID:19733558)
UniProt Ensembl RGD
PMID:19733558
GO_REF:0000024 GO_REF:0000107
NCBI chr X:136,789,770...137,157,598
Ensembl chr X:131,868,990...132,236,798
G
Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO IEA
MGI:1352630|MGI:2180015|MGI:6358100 (PMID:11984590), (PMID:17341678), (PMID:28893911), (PMID:31821173) GO_REF:0000107
RGD Ensembl
PMID:11984590 PMID:17341678 PMID:28893911 PMID:31821173
GO_REF:0000107
NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603
G
Kif7
kinesin family member 7
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:133,639,487...133,658,539
Ensembl chr 1:133,640,065...133,658,576
G
Lrp1
LDL receptor related protein 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:63,380,356...63,460,910
G
Lrp2
LDL receptor related protein 2
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Ltbp1
latent transforming growth factor beta binding protein 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
G
Megf8
multiple EGF-like-domains 8
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613
G
Mmp21
matrix metallopeptidase 21
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:197,910,178...197,915,847
Ensembl chr 1:188,480,186...188,485,855
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Ndst1
N-deacetylase and N-sulfotransferase 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
G
Nppb
natriuretic peptide B
involved_in
ISO
(PMID:33245046)
RGD
PMID:33245046
NCBI chr 5:163,699,955...163,701,314
Ensembl chr 5:158,416,866...158,418,168
G
Pcsk5
proprotein convertase subtilisin/kexin type 5
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:224,263,823...224,694,350
Ensembl chr 1:214,837,927...215,267,600
G
Pde2a
phosphodiesterase 2A
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
G
Plxnd1
plexin D1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Prdm1
PR/SET domain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488
G
Prickle1
prickle planar cell polarity protein 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
G
Ptk7
protein tyrosine kinase 7
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
G
Robo1
roundabout guidance receptor 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Smad6
SMAD family member 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975
G
Snx17
sorting nexin 17
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 6:30,897,500...30,902,972
Ensembl chr 6:25,177,391...25,183,030
G
Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:255,199,108...255,296,983
Ensembl chr 1:245,257,768...245,355,577
G
Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 7:113,556,157...113,587,351
Ensembl chr 7:111,686,371...111,707,058
G
Vegfb
vascular endothelial growth factor B
acts_upstream_of_or_within
ISO
MGI:2178819 (PMID:10666423)
RGD
PMID:10666423
NCBI chr 1:213,601,570...213,607,254
Ensembl chr 1:204,172,225...204,177,944
G
Zbtb14
zinc finger and BTB domain containing 14
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:109,333,440...109,338,646
Ensembl chr 9:109,331,028...109,338,632
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:2447620 (PMID:20619341) GO_REF:0000107
RGD Ensembl
PMID:20619341
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Setd2
SET domain containing 2, histone lysine methyltransferase
acts_upstream_of_or_within
ISO
MGI:4437211 (PMID:20133625)
RGD
PMID:20133625
NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489
G
Sgcd
sarcoglycan, delta
acts_upstream_of_or_within
ISO
MGI:2154694 (PMID:10481911)
RGD
PMID:10481911
NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:18093989)
RGD
PMID:18093989
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2176158 (PMID:15750185)
RGD
PMID:15750185
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Dand5
DAN domain BMP antagonist family member 5
involved_in
ISO IBA
(PMID:15466485) GO_REF:0000033
RGD GO_Central
PMID:15466485
GO_REF:0000033
NCBI chr19:40,231,061...40,245,329
Ensembl chr19:23,334,164...23,339,589
G
Hand1
heart and neural crest derivatives expressed 1
acts_upstream_of_or_within
ISO IEA
(PMID:11076684) GO_REF:0000107
RGD Ensembl
PMID:11076684
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:1857639 (PMID:9576835) GO_REF:0000107
RGD Ensembl
PMID:9576835
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Megf8
multiple EGF-like-domains 8
involved_in acts_upstream_of_or_within
ISO IEA ISS
(PMID:23063620) GO_REF:0000107 MGI:3722325 (PMID:18043505) GO_REF:0000024
RGD Ensembl UniProt
PMID:18043505 PMID:23063620
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613
G
Mmp21
matrix metallopeptidase 21
involved_in
ISO IEA
(PMID:26437028) GO_REF:0000107
RGD Ensembl
PMID:26437028
GO_REF:0000107
NCBI chr 1:197,910,178...197,915,847
Ensembl chr 1:188,480,186...188,485,855
G
Odad3
outer dynein arm docking complex subunit 3
acts_upstream_of_or_within
ISO
MGI:5445347 (PMID:25192045)
RGD
PMID:25192045
NCBI chr 8:28,796,909...28,810,587
Ensembl chr 8:20,520,898...20,534,499
G
Tbxt
T-box transcription factor T
acts_upstream_of_or_within
ISO IEA
MGI:1856184 (PMID:10349618) GO_REF:0000107
RGD Ensembl
PMID:10349618
GO_REF:0000107
NCBI chr 1:54,845,674...54,859,340
Ensembl chr 1:52,298,099...52,305,864
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3583785 (PMID:16314491) GO_REF:0000107
RGD Ensembl
PMID:16314491
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Foxh1
forkhead box H1
acts_upstream_of_or_within
ISO IEA
MGI:2179442 (PMID:15363409) GO_REF:0000107
RGD Ensembl
PMID:15363409
GO_REF:0000107
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:2386265 (PMID:9136932)
RGD
PMID:9136932
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Apela
apelin receptor early endogenous ligand
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28663440), (PMID:28854362)
UniProt Ensembl RGD
PMID:28663440 PMID:28854362
GO_REF:0000024 GO_REF:0000107
NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465
G
Cdc42
cell division cycle 42
involved_in
ISO
MGI:1857473|MGI:2687362 (PMID:31219639)
RGD
PMID:31219639
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
G
Chrd
chordin
involved_in
ISO
MGI:2157350 (PMID:17685487)
RGD
PMID:17685487
NCBI chr11:93,676,400...93,685,584
Ensembl chr11:80,171,994...80,180,673
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO IEA
MGI:2148567 (PMID:18231602) GO_REF:0000107
RGD Ensembl
PMID:18231602
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Ece1
endothelin converting enzyme 1
involved_in
IEA ISO
GO_REF:0000107 MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)
Ensembl RGD
PMID:30735130
GO_REF:0000107
NCBI chr 5:155,361,031...155,462,723
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO IEA
MGI:1857473|MGI:1857637|MGI:2158947|MGI:2687362 (PMID:24875861), (PMID:30735130), (PMID:31219639) GO_REF:0000107
RGD Ensembl
PMID:24875861 PMID:30735130 PMID:31219639
GO_REF:0000107
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:105923|MGI:1857473|MGI:1857637|MGI:2158947|MGI:2179061|MGI:2687362|MGI:3773699 (PMID:20929948), (PMID:24875861), (PMID:30735130), (PMID:31219639)
Ensembl RGD
PMID:20929948 PMID:24875861 PMID:30735130 PMID:31219639
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO IEA
MGI:2176467|MGI:2686864 (PMID:16720879) GO_REF:0000107
RGD Ensembl
PMID:16720879
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO IEA
MGI:1347481 (PMID:16678147) GO_REF:0000107
RGD Ensembl
PMID:16678147
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (PMID:16678147)
RGD
PMID:16678147
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:2179443|MGI:2386265 (PMID:9136932), (PMID:9136933)
RGD
PMID:9136932 PMID:9136933
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gja1
gap junction protein, alpha 1
acts_upstream_of_or_within
ISO
MGI:1857177 (PMID:14732399)
RGD
PMID:14732399
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445466 (PMID:14732399), (PMID:22203979) GO_REF:0000107
RGD Ensembl
PMID:14732399 PMID:22203979
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Greb1l
GREB1 like retinoic acid receptor coactivator
acts_upstream_of_or_within
ISO IEA
(PMID:37852253) GO_REF:0000107
RGD Ensembl
PMID:37852253
GO_REF:0000107
NCBI chr18:1,392,330...1,629,483
Ensembl chr18:1,392,725...1,628,067
G
Hand1
heart and neural crest derivatives expressed 1
acts_upstream_of_or_within
ISO IEA
MGI:2153823 (PMID:9500551) GO_REF:0000107
RGD Ensembl
PMID:9500551
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Hhex
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO IEA
MGI:2449914 (PMID:15459110) GO_REF:0000107
RGD Ensembl
PMID:15459110
GO_REF:0000107
NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042
G
Ift122
intraflagellar transport 122
involved_in
ISO
(PMID:19000668)
RGD
PMID:19000668
NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:148,905,046...148,975,458
G
Med1
mediator complex subunit 1
acts_upstream_of_or_within
ISO IEA
MGI:2684189 (PMID:14500757) GO_REF:0000107
RGD Ensembl
PMID:14500757
GO_REF:0000107
NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISO
MGI:105923|MGI:1857637|MGI:2158947|MGI:2179061|MGI:2687362 (PMID:30735130)
RGD
PMID:30735130
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Nckap1
NCK-associated protein 1
acts_upstream_of_or_within
ISO IEA
MGI:3578145 (PMID:16831833) GO_REF:0000107
RGD Ensembl
PMID:16831833
GO_REF:0000107
NCBI chr 3:85,824,333...85,898,748
Ensembl chr 3:65,417,453...65,492,217
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:1888496 (PMID:15843414) GO_REF:0000107
RGD Ensembl
PMID:15843414
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nkx2-6
NK2 homeobox 6
involved_in
ISO IEA
(PMID:15649947) GO_REF:0000107 (PMID:9545560)
RGD Ensembl
PMID:9545560 PMID:15649947
GO_REF:0000107
NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO IEA
MGI:2158732 (PMID:11311163) GO_REF:0000107
RGD Ensembl
PMID:11311163
GO_REF:0000107
NCBI chr20:29,911,258...29,919,659
Ensembl chr20:29,368,436...29,376,837
G
Pcnt
pericentrin
acts_upstream_of_or_within
ISO
MGI:4340776 (PMID:25220058)
RGD
PMID:25220058
NCBI chr20:12,189,767...12,278,179
Ensembl chr20:12,191,648...12,278,710
G
Plxna4
plexin A4
involved_in
ISO IEA
MGI:105923|MGI:1857637|MGI:2158947|MGI:2179061|MGI:2687362 (PMID:30735130) GO_REF:0000107
RGD Ensembl
PMID:30735130
GO_REF:0000107
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Slc8a1
solute carrier family 8 member A1
acts_upstream_of_or_within
ISO
MGI:4849923 (PMID:21302256)
RGD
PMID:21302256
NCBI chr 6:18,975,498...19,299,704
Ensembl chr 6:13,194,662...13,535,628
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO IEA
MGI:103559 (PMID:17610846) GO_REF:0000107
RGD Ensembl
PMID:17610846
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:107543 (PMID:17610846)
RGD
PMID:17610846
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
G
Tbx20
T-box transcription factor 20
acts_upstream_of_or_within
ISO IEA
MGI:3579836|MGI:97350 (PMID:15843414) GO_REF:0000107
RGD Ensembl
PMID:15843414
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:5538565 (PMID:23844108) GO_REF:0000107
RGD Ensembl
PMID:23844108
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tmem94
transmembrane protein 94
acts_upstream_of_or_within
ISO
MGI:6358488 (PMID:30526868)
RGD
PMID:30526868
NCBI chr10:101,490,496...101,525,983
Ensembl chr10:100,991,573...101,027,394
G
Traf3ip1
TRAF3 interacting protein 1
acts_upstream_of_or_within
ISO IEA
MGI:4129326 (PMID:21945076) GO_REF:0000107
RGD Ensembl
PMID:21945076
GO_REF:0000107
NCBI chr 9:99,521,176...99,557,966
Ensembl chr 9:92,073,640...92,108,977
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15901664) GO_REF:0000107
RGD Ensembl
PMID:15901664
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hand1
heart and neural crest derivatives expressed 1
acts_upstream_of_or_within
ISO IEA
(PMID:11076684) GO_REF:0000107
RGD Ensembl
PMID:11076684
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Cimap3
ciliary microtubule associated protein 3
acts_upstream_of_or_within
ISO IEA
MGI:4819764 (PMID:20643351) GO_REF:0000107
RGD Ensembl
PMID:20643351
GO_REF:0000107
NCBI chr 2:196,164,103...196,181,466
Ensembl chr 2:193,475,782...193,493,139
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
ISO
(PMID:15475956)
RGD
PMID:15475956
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Ift122
intraflagellar transport 122
involved_in
ISO
(PMID:21209331)
RGD
PMID:21209331
NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:148,905,046...148,975,458
G
Invs
inversin
acts_upstream_of_or_within
ISO
MGI:1856915 (PMID:9192865)
RGD
PMID:9192865
NCBI chr 5:67,406,511...67,559,355
Ensembl chr 5:62,610,968...62,763,350
G
Megf8
multiple EGF-like-domains 8
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:24052814) GO_REF:0000107
CAFA RGD Ensembl
PMID:24052814
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:1927227 (PMID:9192865) GO_REF:0000107
RGD Ensembl
PMID:9192865
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Pitx2
paired-like homeodomain 2
involved_in
ISO
(PMID:17234970)
RGD
PMID:17234970
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107
RGD Ensembl
PMID:19506109
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Megf8
multiple EGF-like-domains 8
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24052814) GO_REF:0000024
Ensembl RGD CAFA
PMID:24052814
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Ryr2
ryanodine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:9628868)
UniProt RGD
PMID:9628868
GO_REF:0000024
NCBI chr17:63,081,527...63,667,141
Ensembl chr17:58,389,925...58,975,142
G
Sox17
SRY-box transcription factor 17
involved_in
ISO IEA
(PMID:21305474) GO_REF:0000107
RGD Ensembl
PMID:21305474
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15901664) GO_REF:0000107
RGD Ensembl
PMID:15901664
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tead1
TEA domain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:103262|MGI:104904 (PMID:18332127)
RGD
PMID:18332127
NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
G
Tead2
TEA domain transcription factor 2
acts_upstream_of_or_within
ISO
MGI:101876|MGI:103262 (PMID:18332127)
RGD
PMID:18332127
NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
G
Yap1
Yes1 associated transcriptional regulator
acts_upstream_of_or_within
ISO IEA
MGI:101876|MGI:104904 (PMID:18332127) GO_REF:0000107
RGD Ensembl
PMID:18332127
GO_REF:0000107
NCBI chr 8:13,380,551...13,451,640
Ensembl chr 8:5,095,722...5,167,010
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20890042) GO_REF:0000107
RGD Ensembl
PMID:20890042
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Nrg1
neuregulin 1
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO IEA
MGI:103559 (PMID:17610846) GO_REF:0000107
RGD Ensembl
PMID:17610846
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:107543 (PMID:17610846)
RGD
PMID:17610846
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107
NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107
RGD Ensembl
PMID:19506109
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:18924235)
Ensembl RGD
PMID:18924235
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
(PMID:12441304) GO_REF:0000107
RGD Ensembl
PMID:12441304
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2176158 (PMID:15750185)
RGD
PMID:15750185
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Epha3
Eph receptor A3
involved_in
ISO
(PMID:17046737)
RGD
PMID:17046737
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Erbb3
erb-b2 receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
MGI:1928828 (PMID:9362461)
RGD
PMID:9362461
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
G
Foxf1
forkhead box F1
involved_in
ISO IEA
(PMID:19500772) GO_REF:0000107
RGD Ensembl
PMID:19500772
GO_REF:0000107
NCBI chr19:66,062,635...66,066,427
Ensembl chr19:49,153,699...49,157,738
G
Gata4
GATA binding protein 4
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:21330551) GO_REF:0000107 (PMID:17643447) MGI:102541 (PMID:19084512)
RGD Ensembl
PMID:17643447 PMID:19084512 PMID:21330551
GO_REF:0000107
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Nedd4
NEDD4 E3 ubiquitin protein ligase
acts_upstream_of_or_within
ISO
MGI:3799317|MGI:98737 (PMID:20026598)
RGD
PMID:20026598
NCBI chr 8:82,264,751...82,349,642
Ensembl chr 8:73,383,695...73,468,951
G
Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
UniProtKB:P61022 (PMID:22300732)
RGD
PMID:22300732
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO IEA
MGI:1857230 (PMID:14701881) GO_REF:0000107
RGD Ensembl
PMID:14701881
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Rbm24
RNA binding motif protein 24
involved_in
ISO
(PMID:29358667)
RGD
PMID:29358667
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:95664 (PMID:19084512) GO_REF:0000107
RGD Ensembl
PMID:19084512
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Thbs1
thrombospondin 1
acts_upstream_of_or_within
ISO
MGI:97297 (PMID:20026598)
RGD
PMID:20026598
NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440
G
Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO IEA
MGI:5432904 (PMID:25318679) GO_REF:0000107
RGD Ensembl
PMID:25318679
GO_REF:0000107
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:16140292) GO_REF:0000107
RGD Ensembl
PMID:16140292
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Aplnr
apelin receptor
involved_in
ISO IEA
(PMID:23603510) GO_REF:0000107
RGD Ensembl
PMID:23603510
GO_REF:0000107
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmp5
bone morphogenetic protein 5
involved_in
ISO IEA
UniProtKB:P23359 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO IEA
UniProtKB:P49003 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO IEA
(PMID:16314491) GO_REF:0000107
RGD Ensembl
PMID:16314491
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409), (PMID:21983003) GO_REF:0000107
RGD Ensembl
PMID:15843409 PMID:21983003
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx3
T-box transcription factor 3
involved_in
ISO IEA
(PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:16140292) GO_REF:0000107
RGD Ensembl
PMID:16140292
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Cplane2
ciliogenesis and planar polarity effector complex subunit 2
acts_upstream_of_or_within
ISO IEA
MGI:6887373 (PMID:29038301) GO_REF:0000107
RGD Ensembl
PMID:29038301
GO_REF:0000107
NCBI chr 5:158,798,503...158,799,451
Ensembl chr 5:153,515,376...153,522,508
G
Gata5
GATA binding protein 5
involved_in
ISO IEA
(PMID:21633169) GO_REF:0000107
RGD Ensembl
PMID:21633169
GO_REF:0000107
NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
G
LOC120103024
ciliogenesis and planar polarity effector 2-like
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 5:153,515,263...153,522,456
Ensembl chr 5:153,515,376...153,522,508
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:11390347) GO_REF:0000107
RGD Ensembl
PMID:11390347
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20652948) GO_REF:0000107
RGD Ensembl
PMID:20652948
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:132,239,729...132,256,591
G
Adamts5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
involved_in
ISO IEA
UniProtKB:Q62432 (PMID:23531444) GO_REF:0000107
RGD Ensembl
PMID:23531444
GO_REF:0000107
NCBI chr11:38,486,945...38,533,516
Ensembl chr11:25,000,637...25,047,205
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3583785 (PMID:16314491) GO_REF:0000107 (PMID:20890042)
RGD Ensembl
PMID:16314491 PMID:20890042
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:11854453), (PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:11854453 PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Eng
endoglin
involved_in
ISO
(PMID:12941632), (PMID:19703439)
RGD
PMID:12941632 PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
UniProtKB:Q9WV93 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q02248 (PMID:17519333)
Ensembl RGD
PMID:17519333
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934|MGI:2385439 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (PMID:22821713)
RGD
PMID:22821713
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
G
Nos3
nitric oxide synthase 3
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q01705 (PMID:27107132)
Ensembl RGD
PMID:27107132
GO_REF:0000107
NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
involved_in
ISO IEA
UniProtKB:P70313 (PMID:14701881), (PMID:27107132) GO_REF:0000107
RGD Ensembl
PMID:14701881 PMID:27107132
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Smad2
SMAD family member 2
involved_in
ISO
UniProtKB:Q9R001 (PMID:23531444)
RGD
PMID:23531444
NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2385468|MGI:2450311 (PMID:11951052)
UniProt Ensembl RGD
PMID:11951052
GO_REF:0000024 GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15459098) GO_REF:0000107
RGD Ensembl
PMID:15459098
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15901664) GO_REF:0000107
RGD Ensembl
PMID:15901664
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:11390347), (PMID:19161227) GO_REF:0000107
RGD Ensembl
PMID:11390347 PMID:19161227
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (PMID:18539270)
RGD
PMID:18539270
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvrl1
activin A receptor like type 1
NOT|involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:132,239,729...132,256,591
G
Eng
endoglin
NOT|involved_in
ISO
(PMID:12941632)
RGD
PMID:12941632
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Has2
hyaluronan synthase 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:10930438)
UniProt Ensembl RGD
PMID:10930438
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Efna1
ephrin A1
involved_in
ISO
(PMID:20960543)
RGD
PMID:20960543
NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (PMID:15680351)
RGD
PMID:15680351
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:1341800 (PMID:15680351) GO_REF:0000107
RGD Ensembl
PMID:15680351
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Kdr
kinase insert domain receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:7596435)
Ensembl RGD
PMID:7596435
GO_REF:0000107
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:17336907)
RGD
PMID:17336907
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Stk3
serine/threonine kinase 3
acts_upstream_of_or_within
ISO
MGI:1929004 (PMID:19786569)
RGD
PMID:19786569
NCBI chr 7:67,938,341...68,208,472
Ensembl chr 7:66,052,345...66,323,233
G
Stk4
serine/threonine kinase 4
acts_upstream_of_or_within
ISO IEA
MGI:1928487 (PMID:19786569) GO_REF:0000107
RGD Ensembl
PMID:19786569
GO_REF:0000107
NCBI chr 3:173,165,238...173,247,135
Ensembl chr 3:152,745,681...152,827,744
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO IEA
MGI:3777011 (PMID:17573777) GO_REF:0000107
RGD Ensembl
PMID:17573777
GO_REF:0000107
NCBI chr 3:152,130,767...152,160,487
Ensembl chr 3:131,677,391...131,708,359
G
Prox1
prospero homeobox 1
involved_in
ISO IEA
(PMID:19091769) GO_REF:0000107
RGD Ensembl
PMID:19091769
GO_REF:0000107
NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO IEA
MGI:103559 (PMID:17610846) GO_REF:0000107
RGD Ensembl
PMID:17610846
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:107543 (PMID:17610846)
RGD
PMID:17610846
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:16025100), (PMID:20890042) GO_REF:0000107
RGD Ensembl
PMID:16025100 PMID:20890042
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:17704211)
RGD
PMID:17704211
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mir21
microRNA 21
involved_in
ISO
(PMID:23441172)
RGD
PMID:23441172
NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
G
Pdcd4
programmed cell death 4
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172
RGD:10400865
NCBI chr 1:262,912,659...262,949,581
Ensembl chr 1:252,921,392...252,944,275
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172
RGD:10400865
NCBI chr 2:122,484,995...122,490,008
Ensembl chr 2:120,556,706...120,566,189
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18924235)
RGD
PMID:18924235
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:21364285) GO_REF:0000107 (PMID:19509466)
RGD Ensembl
PMID:19509466 PMID:21364285
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1860511 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
acts_upstream_of_or_within
ISO IEA
MGI:1341800 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (PMID:18667074)
RGD
PMID:18667074
NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966
G
Msx2
msh homeobox 2
acts_upstream_of_or_within
ISO IEA
MGI:97168 (PMID:18667074) GO_REF:0000107
RGD Ensembl
PMID:18667074
GO_REF:0000107
NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:14701881) GO_REF:0000107
RGD Ensembl
PMID:14701881
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO IEA
UniProtKB:Q3UZ96 (PMID:18663143) GO_REF:0000107
RGD Ensembl
PMID:18663143
GO_REF:0000107
NCBI chr 3:176,667,476...176,671,965
Ensembl chr 3:156,248,485...156,252,969
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within involved_in
ISO
MGI:2447175 (PMID:18663143)
RGD
PMID:18663143
NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200
G
Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO IEA
MGI:5432904 (PMID:25318679) GO_REF:0000107
RGD Ensembl
PMID:25318679
GO_REF:0000107
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445238 (PMID:10969038) GO_REF:0000107
RGD Ensembl
PMID:10969038
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:19762328) GO_REF:0000107
RGD Ensembl
PMID:19762328
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20007915) GO_REF:0000107
RGD Ensembl
PMID:20007915
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO IEA
(PMID:26295701) GO_REF:0000107
RGD Ensembl
PMID:26295701
GO_REF:0000107
NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO IEA
MGI:2158343 (PMID:16943278) GO_REF:0000107
RGD Ensembl
PMID:16943278
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Emp2
epithelial membrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:30773261)
UniProt RGD
PMID:30773261
GO_REF:0000024
NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:26295701)
RGD
PMID:26295701
NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:1859153 (PMID:19654211)
RGD
PMID:19654211
NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147
G
Lemd2
LEM domain nuclear envelope protein 2
involved_in
ISO
(PMID:25790465)
RGD
PMID:25790465
NCBI chr20:5,284,275...5,298,281
Ensembl chr20:5,282,397...5,296,626
G
Rbm20
RNA binding motif protein 20
involved_in
IDA IEA ISO IMP
PMID:23307558 GO_REF:0000107 (PMID:24584570), (PMID:27630136), (PMID:29895960), (PMID:33110103), (PMID:35041844), (PMID:35394688) (PMID:33188278) (PMID:22466703), (PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935), (PMID:34732726)
Ensembl RGD
PMID:22466703 PMID:24584570 PMID:26604136 PMID:27496873 PMID:27630136 PMID:29895960 PMID:30948719 PMID:32840935 PMID:33110103 PMID:33188278 PMID:34732726 PMID:35041844 PMID:35394688 PMID:23307558 PMID:22466703 More...
GO_REF:0000107, RGD:152025504 , RGD:7241566
NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mir208a
microRNA 208a
acts_upstream_of_or_within
ISO
MGI:3709980 (PMID:17379774)
RGD
PMID:17379774
NCBI chr15:28,425,570...28,425,652
G
Ttn
titin
acts_upstream_of_or_within
ISO
MGI:3763610 (PMID:17360664)
RGD
PMID:17360664
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
involved_in
ISO IEA ISS
(PMID:19736317) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:19736317
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO ISS IEA
(PMID:20702560) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:20702560
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO IEA
(PMID:18297060) GO_REF:0000107
RGD Ensembl
PMID:18297060
GO_REF:0000107
NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202
G
Gata5
GATA binding protein 5
involved_in
ISO IEA
(PMID:21633169) GO_REF:0000107
RGD Ensembl
PMID:21633169
GO_REF:0000107
NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18297060), (PMID:18593560) GO_REF:0000107
RGD Ensembl
PMID:18297060 PMID:18593560
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Pou5f1
POU class 5 homeobox 1
involved_in
ISO
(PMID:19736317)
RGD
PMID:19736317
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
AABR07063281.1
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
G
Ahi1
Abelson helper integration site 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:15,762,462...15,891,041
G
Aplnr
apelin receptor
involved_in
ISO IEA
(PMID:23603510) GO_REF:0000107
RGD Ensembl
PMID:23603510
GO_REF:0000107
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Arl13b
ARF like GTPase 13B
acts_upstream_of_or_within
ISO IEA
MGI:3578151 (PMID:22554696) GO_REF:0000107
RGD Ensembl
PMID:22554696
GO_REF:0000107
NCBI chr11:13,597,538...13,663,681
Ensembl chr11:150,955...217,197
G
Asb2
ankyrin repeat and SOCS box-containing 2
involved_in
ISO
(PMID:32179481)
RGD
PMID:32179481
NCBI chr 6:128,239,550...128,275,833
Ensembl chr 6:122,474,756...122,510,854
G
C2cd3
C2 domain containing 3 centriole elongation regulator
acts_upstream_of_or_within
ISO
(PMID:19004860)
RGD
PMID:19004860
NCBI chr 1:164,127,304...164,225,088
Ensembl chr 1:154,715,310...154,812,520
G
Ccdc39
coiled-coil domain 39 molecular ruler complex subunit
involved_in
ISO IEA
(PMID:22693285) GO_REF:0000107
RGD Ensembl
PMID:22693285
GO_REF:0000107
NCBI chr 2:118,593,881...118,631,584
Ensembl chr 2:116,665,261...116,703,350
G
Ccdc40
coiled-coil domain 40 molecular ruler complex subunit
involved_in
ISO IEA IBA
(PMID:22693285) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:22693285
GO_REF:0000033 GO_REF:0000107
NCBI chr10:104,985,283...105,025,813
Ensembl chr10:104,486,748...104,527,243
G
Cfc1
cripto, FRL-1, cryptic family 1
acts_upstream_of_or_within
ISO IEA
MGI:2179530 (PMID:10521397) GO_REF:0000107
RGD Ensembl
PMID:10521397
GO_REF:0000107
NCBI chr 9:44,234,997...44,247,846
Ensembl chr 9:36,739,071...36,751,930
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2176158 (PMID:15750185)
RGD
PMID:15750185
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Cluap1
clusterin associated protein 1
acts_upstream_of_or_within
ISO
MGI:5523142 (PMID:23742838)
RGD
PMID:23742838
NCBI chr10:12,094,346...12,159,440
Ensembl chr10:11,588,017...11,619,711
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISO
(PMID:12730124)
RGD
PMID:12730124
NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179
G
Dnaaf1
dynein, axonemal, assembly factor 1
involved_in
ISO IEA
(PMID:19944400), (PMID:19944405) GO_REF:0000107
RGD Ensembl
PMID:19944400 PMID:19944405
GO_REF:0000107
NCBI chr19:64,532,859...64,560,942
Ensembl chr19:47,624,181...47,652,313
G
Dnaaf19
dynein axonemal assembly factor 19
involved_in
ISO IEA
(PMID:22581229) GO_REF:0000107
RGD Ensembl
PMID:22581229
GO_REF:0000107
NCBI chr10:88,346,453...88,349,853
Ensembl chr10:87,846,357...87,849,757
G
Dvl1
dishevelled segment polarity protein 1
involved_in
ISO IEA
UniProtKB:Q60838 (PMID:22841628) GO_REF:0000107
RGD Ensembl
PMID:22841628
GO_REF:0000107
NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:166,456,686...166,468,664
G
Dvl2
dishevelled segment polarity protein 2
involved_in
ISO IEA
UniProtKB:P51141 (PMID:22841628) GO_REF:0000107
RGD Ensembl
PMID:22841628
GO_REF:0000107
NCBI chr10:55,222,245...55,231,506
Ensembl chr10:54,723,411...54,732,820
G
Eng
endoglin
involved_in
ISO
(PMID:10348742), (PMID:19703439)
RGD
PMID:10348742 PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO IEA
MGI:1857843 (PMID:10411502) GO_REF:0000107
RGD Ensembl
PMID:10411502
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Folr1
folate receptor alpha
involved_in
ISO IEA
(PMID:17286298) GO_REF:0000107
RGD Ensembl
PMID:17286298
GO_REF:0000107
NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667
G
Foxh1
forkhead box H1
involved_in
ISO IEA
(PMID:15363409) GO_REF:0000107
RGD Ensembl
PMID:15363409
GO_REF:0000107
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Gata4
GATA binding protein 4
involved_in
ISO
(PMID:15310850)
RGD
PMID:15310850
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gja1
gap junction protein, alpha 1
acts_upstream_of_or_within
ISO
MGI:1857177 (PMID:9486664)
RGD
PMID:9486664
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Hand1
heart and neural crest derivatives expressed 1
acts_upstream_of_or_within
ISO IEA
MGI:2153823 (PMID:9500551) GO_REF:0000107
RGD Ensembl
PMID:9500551
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:1857639 (PMID:9171826) GO_REF:0000107
RGD Ensembl
PMID:9171826
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO IEA
MGI:2179429 (PMID:14659802) GO_REF:0000107
RGD Ensembl
PMID:14659802
GO_REF:0000107
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261
G
Ift172
intraflagellar transport 172
acts_upstream_of_or_within
ISO IEA
MGI:3829198 (PMID:18930042) GO_REF:0000107
RGD Ensembl
PMID:18930042
GO_REF:0000107
NCBI chr 6:30,801,841...30,841,239
Ensembl chr 6:25,081,980...25,120,860
G
Ift52
intraflagellar transport 52
acts_upstream_of_or_within
ISO IEA
(PMID:15930098) GO_REF:0000107
RGD Ensembl
PMID:15930098
GO_REF:0000107
NCBI chr 3:172,091,591...172,116,497
Ensembl chr 3:151,672,493...151,696,980
G
Ift57
intraflagellar transport 57
acts_upstream_of_or_within
ISO IEA
MGI:3707373 (PMID:17027958) GO_REF:0000107
RGD Ensembl
PMID:17027958
GO_REF:0000107
NCBI chr11:64,528,349...64,593,545
Ensembl chr11:51,059,611...51,124,812
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO IEA
(PMID:11517919) GO_REF:0000107
RGD Ensembl
PMID:11517919
GO_REF:0000107
NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532
G
Kdm2a
lysine demethylase 2A
acts_upstream_of_or_within
ISO
(PMID:25463925)
RGD
PMID:25463925
NCBI chr 1:211,041,859...211,125,749
Ensembl chr 1:201,612,453...201,680,787
G
Kif3a
kinesin family member 3a
acts_upstream_of_or_within
ISO
MGI:2181727 (PMID:10330409)
RGD
PMID:10330409
NCBI chr10:38,226,388...38,263,062
Ensembl chr10:37,725,970...37,759,191
G
Lbx1
ladybird homeobox 1
acts_upstream_of_or_within
ISO IEA
MGI:2386948 (PMID:12522123) GO_REF:0000107
RGD Ensembl
PMID:12522123
GO_REF:0000107
NCBI chr 1:254,033,009...254,034,826
Ensembl chr 1:244,083,873...244,085,690
G
Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:98958 (PMID:19795512)
RGD
PMID:19795512
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724)
UniProt RGD
PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Mib1
MIB E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO IEA
MGI:3603514 (PMID:16000382) GO_REF:0000107
RGD Ensembl
PMID:16000382
GO_REF:0000107
NCBI chr18:2,075,309...2,199,774
Ensembl chr18:1,802,519...1,920,689
G
Mical2
microtubule associated monooxygenase, calponin and LIM domain containing 2
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 1:175,780,441...175,965,157
Ensembl chr 1:166,345,859...166,471,719 Ensembl chr 1:166,345,859...166,471,719
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:1927227 (PMID:16510504), (PMID:7628699), (PMID:9192865) GO_REF:0000107
RGD Ensembl
PMID:7628699 PMID:9192865 PMID:16510504
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO IEA
MGI:106676 (PMID:16496285) GO_REF:0000107
RGD Ensembl
PMID:16496285
GO_REF:0000107
NCBI chr20:29,911,258...29,919,659
Ensembl chr20:29,368,436...29,376,837
G
Notch1
notch receptor 1
involved_in
ISO IEA
UniProtKB:O35516 (PMID:12730124) GO_REF:0000107
RGD Ensembl
PMID:12730124
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Notch2
notch receptor 2
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q01705 (PMID:12730124)
Ensembl RGD
PMID:12730124
GO_REF:0000107
NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088
G
Noto
notochord homeobox
acts_upstream_of_or_within
ISO IEA
MGI:3053092 (PMID:17884984) GO_REF:0000107
RGD Ensembl
PMID:17884984
GO_REF:0000107
NCBI chr 4:119,518,663...119,522,902
Ensembl chr 4:117,961,163...117,965,402
G
Nphp3
nephrocystin 3
involved_in
ISO IEA
(PMID:18371931), (PMID:20007846) GO_REF:0000107
RGD Ensembl
PMID:18371931 PMID:20007846
GO_REF:0000107
NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:104,621,864...104,662,383
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO IEA
MGI:3777011 (PMID:17573777) GO_REF:0000107
RGD Ensembl
PMID:17573777
GO_REF:0000107
NCBI chr 3:152,130,767...152,160,487
Ensembl chr 3:131,677,391...131,708,359
G
Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:21719175)
RGD
PMID:21719175
NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO IEA
MGI:109284 (PMID:10557208) GO_REF:0000107
RGD Ensembl
PMID:10557208
GO_REF:0000107
NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857796 (PMID:10411502), (PMID:10500184) GO_REF:0000107 (PMID:11517919)
RGD Ensembl
PMID:10411502 PMID:10500184 PMID:11517919
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
G
Smad3
SMAD family member 3
acts_upstream_of_or_within
ISO IEA
MGI:108051 (PMID:15183723) GO_REF:0000107
RGD Ensembl
PMID:15183723
GO_REF:0000107
NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960
G
Smo
smoothened, frizzled class receptor
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:11517919) GO_REF:0000024
Ensembl RGD UniProt
PMID:11517919
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2179440 (PMID:17610846) GO_REF:0000107 (PMID:17610846), (PMID:17655922)
RGD Ensembl
PMID:17610846 PMID:17655922
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Srf
serum response factor
acts_upstream_of_or_within
ISO IEA
MGI:2385465|MGI:2386742 (PMID:15929941) GO_REF:0000107
RGD Ensembl
PMID:15929941
GO_REF:0000107
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
G
Stil
STIL, centriolar assembly protein
acts_upstream_of_or_within
ISO
MGI:2152962 (PMID:10385121)
RGD
PMID:10385121
NCBI chr 5:133,757,598...133,810,493
Ensembl chr 5:128,520,953...128,573,730
G
Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO IEA
MGI:3512046 (PMID:16155214) GO_REF:0000107
RGD Ensembl
PMID:16155214
GO_REF:0000107
NCBI chr 1:255,199,108...255,296,983
Ensembl chr 1:245,257,768...245,355,577
G
Tbx20
T-box transcription factor 20
acts_upstream_of_or_within involved_in
ISO IEA IBA
MGI:3579849|MGI:3580099 (PMID:15843407), (PMID:15901664) GO_REF:0000107 GO_REF:0000033 (PMID:15843409)
RGD Ensembl GO_Central
PMID:15843407 PMID:15843409 PMID:15901664
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:2655214|MGI:3769504 (PMID:17460765), (PMID:18723448) GO_REF:0000107
RGD Ensembl
PMID:17460765 PMID:18723448
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:17050629) GO_REF:0000107
RGD Ensembl
PMID:17050629
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Tmed2
transmembrane p24 trafficking protein 2
acts_upstream_of_or_within
ISO IEA
MGI:4343479|MGI:4456438 (PMID:20178780) GO_REF:0000107
RGD Ensembl
PMID:20178780
GO_REF:0000107
NCBI chr12:37,713,522...37,722,606
Ensembl chr12:32,052,543...32,071,903
G
Vangl2
VANGL planar cell polarity protein 2
involved_in
ISO IEA
(PMID:11440971) GO_REF:0000107
RGD Ensembl
PMID:11440971
GO_REF:0000107
NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO IEA
MGI:1857489 (PMID:16291790) GO_REF:0000107
RGD Ensembl
PMID:16291790
GO_REF:0000107
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO IEA
MGI:1298218 (PMID:19795512) GO_REF:0000107
RGD Ensembl
PMID:19795512
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Zic3
Zic family member 3
involved_in acts_upstream_of_or_within
ISO
(PMID:9354794) MGI:2180720|MGI:3043027|MGI:97359 (PMID:15384171), (PMID:16496285)
RGD
PMID:9354794 PMID:15384171 PMID:16496285
NCBI chr X:141,159,623...141,165,587
Ensembl chr X:136,124,026...136,134,746
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Abcc9
ATP binding cassette subfamily C member 9
acts_upstream_of_or_within
ISO
MGI:1100508|MGI:6389010 (PMID:30089727), (PMID:31821173)
RGD
PMID:30089727 PMID:31821173
NCBI chr 4:177,262,848...177,386,837
Ensembl chr 4:175,532,547...175,655,356
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO IEA
MGI:1857891 (PMID:11245568) GO_REF:0000107
RGD Ensembl
PMID:11245568
GO_REF:0000107
NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107
G
Alpk2
alpha-kinase 2
involved_in
ISO
(PMID:29888752)
RGD
PMID:29888752
NCBI chr18:58,775,603...58,906,150
Ensembl chr18:58,775,605...58,906,258
G
Arid2
AT-rich interaction domain 2
acts_upstream_of_or_within
ISO IEA
MGI:4433303 (PMID:25299188) GO_REF:0000107
RGD Ensembl
PMID:25299188
GO_REF:0000107
NCBI chr 7:129,326,371...129,443,813
Ensembl chr 7:127,447,278...127,563,512
G
Asxl1
ASXL transcriptional regulator 1
acts_upstream_of_or_within
ISO IEA
MGI:4431878 (PMID:24860998) GO_REF:0000107
RGD Ensembl
PMID:24860998
GO_REF:0000107
NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of_or_within
ISO
MGI:3840841 (PMID:24860998)
RGD
PMID:24860998
NCBI chr 6:32,090,497...32,234,487
Ensembl chr 6:26,425,954...26,507,477
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO IEA
(PMID:20702560) GO_REF:0000107
RGD Ensembl
PMID:20702560
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO IEA
MGI:2158342|MGI:2158390 (PMID:17359964) GO_REF:0000107
RGD Ensembl
PMID:17359964
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
C16h10orf71
similar to human chromosome 10 open reading frame 71
acts_upstream_of_or_within
ISO
(PMID:38950288)
RGD
PMID:38950288
NCBI chr16:7,910,597...7,961,900
Ensembl chr16:7,910,433...7,961,958
G
Cert1
ceramide transporter 1
acts_upstream_of_or_within
ISO IEA
MGI:3837565 (PMID:19139267) GO_REF:0000107
RGD Ensembl
PMID:19139267
GO_REF:0000107
NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074
G
Cfc1
cripto, FRL-1, cryptic family 1
acts_upstream_of_or_within
ISO IEA
MGI:2179530 (PMID:10521397) GO_REF:0000107
RGD Ensembl
PMID:10521397
GO_REF:0000107
NCBI chr 9:44,234,997...44,247,846
Ensembl chr 9:36,739,071...36,751,930
G
Chd7
chromodomain helicase DNA binding protein 7
involved_in acts_upstream_of_or_within
ISO IEA IBA
(PMID:15300250) GO_REF:0000107 MGI:3588650 (PMID:16207732) GO_REF:0000033
RGD Ensembl GO_Central
PMID:15300250 PMID:16207732
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Col11a1
collagen type XI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:88457 (PMID:17029294)
RGD
PMID:17029294
NCBI chr 2:204,509,136...204,702,264
Ensembl chr 2:201,820,715...202,013,853
G
Col2a1
collagen type II alpha 1 chain
acts_upstream_of_or_within
ISO IEA
MGI:2152978 (PMID:7590256) GO_REF:0000107
RGD Ensembl
PMID:7590256
GO_REF:0000107
NCBI chr 7:130,977,561...131,006,627
Ensembl chr 7:129,098,786...129,127,546
G
Col5a1
collagen type V alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:88446 (PMID:17029294)
RGD
PMID:17029294
NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
G
Dag1
dystroglycan 1
acts_upstream_of_or_within
ISO IEA
MGI:2387358 (PMID:19797173) GO_REF:0000107
RGD Ensembl
PMID:19797173
GO_REF:0000107
NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:108,890,929...108,952,325
G
Dchs1
dachsous cadherin-related 1
acts_upstream_of_or_within
ISO IEA
MGI:4867020 (PMID:21303848) GO_REF:0000107
RGD Ensembl
PMID:21303848
GO_REF:0000107
NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:160,104,931...160,124,808
G
Dlc1
DLC1 Rho GTPase activating protein
acts_upstream_of_or_within
ISO
MGI:3529997 (PMID:15710412)
RGD
PMID:15710412
NCBI chr16:61,954,177...62,374,819
Ensembl chr16:55,291,584...55,671,439
G
Dvl2
dishevelled segment polarity protein 2
acts_upstream_of_or_within
ISO IEA
MGI:108100 (PMID:19008950) GO_REF:0000107
RGD Ensembl
PMID:19008950
GO_REF:0000107
NCBI chr10:55,222,245...55,231,506
Ensembl chr10:54,723,411...54,732,820
G
Dvl3
dishevelled segment polarity protein 3
acts_upstream_of_or_within
ISO
MGI:106613 (PMID:19008950)
RGD
PMID:19008950
NCBI chr11:93,869,834...93,887,013
Ensembl chr11:80,366,117...80,382,462
G
Ephb4
EPH receptor B4
involved_in
ISO
(PMID:10518221)
RGD
PMID:10518221
NCBI chr12:24,963,174...24,988,473
Ensembl chr12:19,326,427...19,351,314
G
Fat4
FAT atypical cadherin 4
acts_upstream_of_or_within
ISO IEA
MGI:3846573 (PMID:21303848) GO_REF:0000107
RGD Ensembl
PMID:21303848
GO_REF:0000107
NCBI chr 2:123,855,289...123,984,716
Ensembl chr 2:121,927,942...122,056,707
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO IEA
MGI:2150347 (PMID:16696966) GO_REF:0000107
RGD Ensembl
PMID:16696966
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Fkbp1a
FKBP prolyl isomerase 1A
involved_in
ISO
(PMID:9461216)
RGD
PMID:9461216
NCBI chr 3:160,500,748...160,520,492
Ensembl chr 3:140,040,278...140,060,743
G
Fkrp
fukutin related protein
acts_upstream_of_or_within
ISO
MGI:4834518 (PMID:27711214)
RGD
PMID:27711214
NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
G
Flna
filamin A
involved_in
ISO
(PMID:17172441)
RGD
PMID:17172441
NCBI chr X:157,159,051...157,185,559
Ensembl chr X:152,007,758...152,031,052
G
Flrt2
fibronectin leucine rich transmembrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:21350012)
UniProt RGD
PMID:21350012
GO_REF:0000024
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO IEA
MGI:1347481 (PMID:16839542) GO_REF:0000107
RGD Ensembl
PMID:16839542
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (PMID:16839542)
RGD
PMID:16839542
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
G
Gaa
alpha glucosidase
acts_upstream_of_or_within
ISO
MGI:2179961 (PMID:9384603)
RGD
PMID:9384603
NCBI chr10:105,028,106...105,045,365
Ensembl chr10:104,529,747...104,546,836
G
Gata4
GATA binding protein 4
involved_in
ISO
(PMID:17975667)
RGD
PMID:17975667
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:1857639 (PMID:11784028) GO_REF:0000107
RGD Ensembl
PMID:11784028
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:9165122) GO_REF:0000024
Ensembl RGD UniProt
PMID:9165122
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:94,184,442...94,206,851
Ensembl chr 9:86,742,102...86,755,108
G
Insr
insulin receptor
involved_in
ISO
(PMID:7693131)
RGD
PMID:7693131
NCBI chr12:5,991,135...6,129,275
Ensembl chr12:1,197,100...1,330,883
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO IEA
MGI:108075 (PMID:16687132) GO_REF:0000107
RGD Ensembl
PMID:16687132
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Kat6a
lysine acetyltransferase 6A
acts_upstream_of_or_within
ISO
MGI:4418468|MGI:98493 (PMID:22921202)
RGD
PMID:22921202
NCBI chr16:75,787,411...75,868,584
Ensembl chr16:69,084,914...69,163,606
G
Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO IEA
MGI:1352630|MGI:6389009 (PMID:30089727), (PMID:31821173) GO_REF:0000107
RGD Ensembl
PMID:30089727 PMID:31821173
GO_REF:0000107
NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603
G
Kdm6a
lysine demethylase 6A
acts_upstream_of_or_within
ISO IEA
MGI:4126347|MGI:5516011 (PMID:23028370) GO_REF:0000107
RGD Ensembl
PMID:23028370
GO_REF:0000107
NCBI chr X:6,920,374...7,060,027
Ensembl chr X:4,337,750...4,477,062
G
Lefty1
left right determination factor 1
involved_in
ISO IEA
(PMID:9708732) GO_REF:0000107
RGD Ensembl
PMID:9708732
GO_REF:0000107
NCBI chr13:95,188,091...95,191,488
Ensembl chr13:92,656,323...92,659,720
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2182080 (PMID:10393122)
GO_Central Ensembl RGD
PMID:10393122
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Mesp2
mesoderm posterior bHLH transcription factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:143,165,914...143,168,520
Ensembl chr 1:133,756,601...133,759,198
G
Mir1
microRNA 1
acts_upstream_of_or_within
ISO
(PMID:17397913)
RGD
PMID:17397913
NCBI chr18:2,160,327...2,160,413
G
Mrtfb
myocardin related transcription factor B
acts_upstream_of_or_within
ISO
MGI:3587937 (PMID:17183527)
RGD
PMID:17183527
NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (PMID:17601530)
RGD
PMID:17601530
NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within
ISO IEA
MGI:3850506 (PMID:25139234) GO_REF:0000107
RGD Ensembl
PMID:25139234
GO_REF:0000107
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
G
Mybpc3
myosin binding protein C3
involved_in acts_upstream_of_or_within
ISO
(PMID:7493025) MGI:2654420 (PMID:10532952), (PMID:10545522)
RGD
PMID:7493025 PMID:10532952 PMID:10545522
NCBI chr 3:97,550,974...97,569,216
Ensembl chr 3:77,095,252...77,113,405
G
Myl2
myosin light chain 2
acts_upstream_of_or_within
ISO
MGI:107956 (PMID:15308581)
RGD
PMID:15308581
NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
G
Ncor2
nuclear receptor co-repressor 2
acts_upstream_of_or_within
ISO
MGI:2148705|MGI:3765904 (PMID:18347093)
RGD
PMID:18347093
NCBI chr12:37,127,736...37,289,612
Ensembl chr12:31,466,412...31,628,319
G
Nipbl
NIPBL, cohesin loading factor
involved_in
ISO IEA IBA
(PMID:8291537) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:8291537
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1927227 (PMID:11784028) GO_REF:0000107 (PMID:17234970)
RGD Ensembl
PMID:11784028 PMID:17234970
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Pds5a
PDS5 cohesin associated factor A
acts_upstream_of_or_within
ISO
MGI:3847257 (PMID:19412548)
RGD
PMID:19412548
NCBI chr14:42,905,734...43,004,740
Ensembl chr14:42,552,647...42,648,669
G
Ptch1
patched 1
acts_upstream_of_or_within
ISO IEA
MGI:1857447 (PMID:9262482) GO_REF:0000107
RGD Ensembl
PMID:9262482
GO_REF:0000107
NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333
G
Slc8a1
solute carrier family 8 member A1
acts_upstream_of_or_within
ISO
MGI:97272 (PMID:15308581)
RGD
PMID:15308581
NCBI chr 6:18,975,498...19,299,704
Ensembl chr 6:13,194,662...13,535,628
G
Smarcd3
SWI/SNF related BAF chromatin remodeling complex subunit D3
acts_upstream_of_or_within
ISO IEA
(PMID:15525990) GO_REF:0000107
RGD Ensembl
PMID:15525990
GO_REF:0000107
NCBI chr 4:11,441,142...11,472,781
Ensembl chr 4:10,548,751...10,580,326
G
Smo
smoothened, frizzled class receptor
acts_upstream_of_or_within
ISO IEA
MGI:101791 (PMID:16687132) GO_REF:0000107
RGD Ensembl
PMID:16687132
GO_REF:0000107
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
G
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO IEA
MGI:2155441 (PMID:9030684) GO_REF:0000107
RGD Ensembl
PMID:9030684
GO_REF:0000107
NCBI chr 6:20,286,117...20,363,350
Ensembl chr 6:14,533,360...14,611,107
G
Synpo2l
synaptopodin 2-like
involved_in
ISO
(PMID:29206857)
RGD
PMID:29206857
NCBI chr15:3,631,974...3,641,429
Ensembl chr15:3,631,834...3,641,429
G
Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
acts_upstream_of_or_within
ISO IEA
MGI:2667182 (PMID:12464436) GO_REF:0000107
RGD Ensembl
PMID:12464436
GO_REF:0000107
NCBI chr 7:113,556,157...113,587,351
Ensembl chr 7:111,686,371...111,707,058
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179136|MGI:2179191|MGI:3046792|MGI:3046795 (PMID:15175244), (PMID:15190012), (PMID:16696966), (PMID:16914493)
UniProt RGD
PMID:15175244 PMID:15190012 PMID:16696966 PMID:16914493
GO_REF:0000024
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tbx19
T-box transcription factor 19
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
G
Tbx2
T-box transcription factor 2
acts_upstream_of_or_within
ISO IEA
MGI:3505715 (PMID:15459098) GO_REF:0000107
RGD Ensembl
PMID:15459098
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:3710254 (PMID:17473172) GO_REF:0000107
RGD Ensembl
PMID:17473172
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tbxt
T-box transcription factor T
involved_in
ISO IBA
(PMID:21632880) GO_REF:0000033
RGD GO_Central
PMID:21632880
GO_REF:0000033
NCBI chr 1:54,845,674...54,859,340
Ensembl chr 1:52,298,099...52,305,864
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:10092230)
AgBase Ensembl RGD
PMID:10092230
GO_REF:0000024 GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Trex1
three prime repair exonuclease 1
acts_upstream_of_or_within
ISO IEA
MGI:3052754 (PMID:15254239) GO_REF:0000107
RGD Ensembl
PMID:15254239
GO_REF:0000107
NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796
G
Ttn
titin
acts_upstream_of_or_within
ISO
MGI:3654306 (PMID:16702235)
RGD
PMID:16702235
NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741
G
Uty
ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
acts_upstream_of_or_within
ISO
MGI:3877328 (PMID:23028370)
RGD
PMID:23028370
NCBI chr Y:1,018,111...1,178,493
Ensembl chr Y:924,168...1,103,422
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:1931047 (PMID:10229225)
RGD
PMID:10229225
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
G
Zmiz1
zinc finger, MIZ-type containing 1
acts_upstream_of_or_within
ISO IEA
MGI:3769389 (PMID:17967885) GO_REF:0000107
RGD Ensembl
PMID:17967885
GO_REF:0000107
NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
G
Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO IEA
MGI:2180033 (PMID:11923874) GO_REF:0000107
RGD Ensembl
PMID:11923874
GO_REF:0000107
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts1
ADAM metallopeptidase with thrombospondin type 1 motif, 1
acts_upstream_of_or_within
ISO IEA
MGI:3609982 (PMID:18267097) GO_REF:0000107
RGD Ensembl
PMID:18267097
GO_REF:0000107
NCBI chr11:38,418,565...38,427,384
Ensembl chr11:24,931,761...24,941,103
G
Adgrg6
adhesion G protein-coupled receptor G6
involved_in
IBA ISO
GO_REF:0000033 (PMID:24082093)
GO_Central RGD
PMID:24082093
GO_REF:0000033
NCBI chr 1:8,812,889...8,954,239
Ensembl chr 1:8,812,904...8,954,123
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:15073151)
Ensembl RGD
PMID:15073151
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Cav3
caveolin 3
acts_upstream_of_or_within
ISO IEA
MGI:2684578 (PMID:19535499) GO_REF:0000107
RGD Ensembl
PMID:19535499
GO_REF:0000107
NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137
G
Egln1
egl-9 family hypoxia-inducible factor 1
acts_upstream_of_or_within
ISO
MGI:3690045 (PMID:16966370)
RGD
PMID:16966370
NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
G
Fhl2
four and a half LIM domains 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:15509787)
Ensembl RGD
PMID:15509787
GO_REF:0000107
NCBI chr 9:52,881,091...52,954,540
Ensembl chr 9:45,388,981...45,431,192
G
Fkbp1a
FKBP prolyl isomerase 1A
involved_in
ISO
(PMID:9461216)
RGD
PMID:9461216
NCBI chr 3:160,500,748...160,520,492
Ensembl chr 3:140,040,278...140,060,743
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:17259303) GO_REF:0000107
RGD Ensembl
PMID:17259303
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
(PMID:16510504) GO_REF:0000107
RGD Ensembl
PMID:16510504
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO IEA
MGI:3777011 (PMID:17573777) GO_REF:0000107
RGD Ensembl
PMID:17573777
GO_REF:0000107
NCBI chr 3:152,130,767...152,160,487
Ensembl chr 3:131,677,391...131,708,359
G
Rbp4
retinol binding protein 4
involved_in
ISO
(PMID:12663486)
RGD
PMID:12663486
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
MGI:109249 (PMID:18267097)
RGD
PMID:18267097
NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975
G
Srf
serum response factor
acts_upstream_of_or_within
ISO IEA
MGI:3522206|MGI:3522214 (PMID:15569937) GO_REF:0000107
RGD Ensembl
PMID:15569937
GO_REF:0000107
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
G
Tek
TEK receptor tyrosine kinase
involved_in
ISO
(PMID:7958865)
RGD
PMID:7958865
NCBI chr 5:114,722,815...114,849,535
Ensembl chr 5:109,607,077...109,733,804
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:12773577)
RGD
PMID:12773577
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hectd1
HECT domain E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:74,916,803...75,003,408
Ensembl chr 6:69,181,436...69,268,053
G
Matr3
matrin 3
acts_upstream_of_or_within
ISO
(PMID:25574029)
RGD
PMID:25574029
NCBI chr18:27,154,098...27,193,212
Ensembl chr18:27,163,714...27,193,166
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (PMID:22821713)
RGD
PMID:22821713
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
G
Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO IEA
MGI:1934018 (PMID:26147524) GO_REF:0000107
RGD Ensembl
PMID:26147524
GO_REF:0000107
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
G
Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
(PMID:22300732)
RGD
PMID:22300732
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Pcdha10
protocadherin alpha 10
acts_upstream_of_or_within
ISO
(PMID:34888534)
RGD
PMID:34888534
Ensembl chr18:28,581,225...28,846,211
G
Pde2a
phosphodiesterase 2A
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
G
Prdm1
PR/SET domain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488
G
Shox2
SHOX homeobox 2
acts_upstream_of_or_within
ISO IEA
MGI:3794658 (PMID:17372176) GO_REF:0000107
RGD Ensembl
PMID:17372176
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Smad6
SMAD family member 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Sox9
SRY-box transcription factor 9
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20056916)
UniProt Ensembl RGD
PMID:20056916
GO_REF:0000024 GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Zbtb14
zinc finger and BTB domain containing 14
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:109,333,440...109,338,646
Ensembl chr 9:109,331,028...109,338,632
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Scx
scleraxis bHLH transcription factor
involved_in
ISO
(PMID:18802027)
RGD
PMID:18802027
NCBI chr 7:110,056,897...110,059,283
Ensembl chr 7:108,176,608...108,178,626
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO IEA
MGI:2385468|MGI:2450311 (PMID:17350610) GO_REF:0000107
RGD Ensembl
PMID:17350610
GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9
involved_in
ISO
(PMID:20096780)
RGD
PMID:20096780
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
G
Fam114a1
family with sequence similarity 114, member A1
acts_upstream_of_or_within
ISO
(PMID:35671117)
RGD
PMID:35671117
NCBI chr14:43,629,349...43,699,800
Ensembl chr14:43,275,701...43,346,174
G
Fgfrl1
fibroblast growth factor receptor-like 1
acts_upstream_of_or_within
ISO IEA
MGI:3849002 (PMID:19383940) GO_REF:0000107
RGD Ensembl
PMID:19383940
GO_REF:0000107
NCBI chr14:1,009,863...1,022,620
Ensembl chr14:1,009,786...1,021,928
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within
ISO IEA
MGI:3850506 (PMID:25139234) GO_REF:0000107
RGD Ensembl
PMID:25139234
GO_REF:0000107
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181766 (PMID:9515963)
RGD
PMID:9515963
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Scx
scleraxis bHLH transcription factor
involved_in
ISO
(PMID:18802027)
RGD
PMID:18802027
NCBI chr 7:110,056,897...110,059,283
Ensembl chr 7:108,176,608...108,178,626
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2176070|MGI:2385468 (PMID:17350610)
UniProt Ensembl RGD
PMID:17350610
GO_REF:0000024 GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO IEA
(PMID:8009224) GO_REF:0000107
RGD Ensembl
PMID:8009224
GO_REF:0000107
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1888389 (PMID:21780244) GO_REF:0000107 (PMID:11390347)
RGD Ensembl
PMID:11390347 PMID:21780244
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Irx3
iroquois homeobox 3
involved_in
ISO IEA
(PMID:26786475) GO_REF:0000107
RGD Ensembl
PMID:26786475
GO_REF:0000107
NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:17050629) GO_REF:0000107
RGD Ensembl
PMID:17050629
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:3773698|MGI:4867385 (PMID:20929948)
Ensembl RGD
PMID:20929948
GO_REF:0000107
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
G
Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO IEA
MGI:1934018 (PMID:26147524) GO_REF:0000107
RGD Ensembl
PMID:26147524
GO_REF:0000107
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
G
Ryr2
ryanodine receptor 2
acts_upstream_of_or_within
ISO
MGI:3713774 (PMID:17431507)
RGD
PMID:17431507
NCBI chr17:63,081,527...63,667,141
Ensembl chr17:58,389,925...58,975,142
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:16151019)
Ensembl RGD
PMID:16151019
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15070745), (PMID:18924235)
Ensembl RGD
PMID:15070745 PMID:18924235
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153818 (PMID:16687131)
RGD
PMID:16687131
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
G
Fzd1
frizzled class receptor 1
acts_upstream_of_or_within
ISO
MGI:1888513|MGI:2135272 (PMID:20940229)
RGD
PMID:20940229
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Fzd2
frizzled class receptor 2
acts_upstream_of_or_within
ISO IEA
MGI:1196625|MGI:2135272 (PMID:20940229) GO_REF:0000107
RGD Ensembl
PMID:20940229
GO_REF:0000107
NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
G
Id2
inhibitor of DNA binding 2
involved_in
ISO
(PMID:21330551)
RGD
PMID:21330551
NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3851507 (PMID:19483677) GO_REF:0000107
RGD Ensembl
PMID:19483677
GO_REF:0000107
NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:11390347) GO_REF:0000107
RGD Ensembl
PMID:11390347
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20652948) GO_REF:0000107
RGD Ensembl
PMID:20652948
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Vangl2
VANGL planar cell polarity protein 2
acts_upstream_of_or_within
ISO IEA
MGI:1196625|MGI:1888513 (PMID:20940229) GO_REF:0000107
RGD Ensembl
PMID:20940229
GO_REF:0000107
NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dchs1
dachsous cadherin-related 1
acts_upstream_of_or_within
ISO IEA
MGI:3036267 (PMID:35200715) GO_REF:0000107
RGD Ensembl
PMID:35200715
GO_REF:0000107
NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:160,104,931...160,124,808
G
Gja5
gap junction protein, alpha 5
involved_in
ISO IEA
(PMID:22199024) GO_REF:0000107
RGD Ensembl
PMID:22199024
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Lix1l
limb and CNS expressed 1 like
acts_upstream_of_or_within
ISO
MGI:2685011 (PMID:35200715)
RGD
PMID:35200715
NCBI chr 2:184,136,018...184,161,918
Ensembl chr 2:184,136,038...184,161,916
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dchs1
dachsous cadherin-related 1
involved_in
ISO IEA
(PMID:26258302) GO_REF:0000107
RGD Ensembl
PMID:26258302
GO_REF:0000107
NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:160,104,931...160,124,808
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:16025100) GO_REF:0000107
RGD Ensembl
PMID:16025100
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107
RGD Ensembl
PMID:19506109
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Adamts19
ADAM metallopeptidase with thrombospondin type 1 motif, 19
involved_in
ISO
(PMID:31844321)
RGD
PMID:31844321
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
G
Axin2
axin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:28069701)
Ensembl RGD
PMID:28069701
GO_REF:0000107
NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:16037571) GO_REF:0000107
RGD Ensembl
PMID:16037571
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:19409885)
RGD
PMID:19409885
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Dchs1
dachsous cadherin-related 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:4867020 (PMID:26258302) GO_REF:0000107
RGD Ensembl
PMID:26258302
GO_REF:0000107
NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:160,104,931...160,124,808
G
Efna1
ephrin A1
involved_in
ISO
(PMID:20960543)
RGD
PMID:20960543
NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866
G
Naglu
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within
ISO IEA
MGI:1934018 (PMID:26147524) GO_REF:0000107
RGD Ensembl
PMID:26147524
GO_REF:0000107
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
G
Smad6
SMAD family member 6
involved_in
ISO IEA
(PMID:10655064) GO_REF:0000107
RGD Ensembl
PMID:10655064
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:16109771)
RGD
PMID:16109771
NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:20804746)
RGD
PMID:20804746
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18924235)
RGD
PMID:18924235
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Fzd1
frizzled class receptor 1
acts_upstream_of_or_within
ISO
MGI:1888513|MGI:2135272 (PMID:20940229)
RGD
PMID:20940229
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Fzd2
frizzled class receptor 2
acts_upstream_of_or_within
ISO IEA
MGI:1196625|MGI:2135272 (PMID:20940229) GO_REF:0000107
RGD Ensembl
PMID:20940229
GO_REF:0000107
NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:12773577)
RGD
PMID:12773577
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Vangl2
VANGL planar cell polarity protein 2
acts_upstream_of_or_within
ISO IEA
MGI:1196625|MGI:1888513 (PMID:20940229) GO_REF:0000107
RGD Ensembl
PMID:20940229
GO_REF:0000107
NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO IEA
MGI:1347481 (PMID:16839542) GO_REF:0000107
RGD Ensembl
PMID:16839542
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (PMID:16839542)
RGD
PMID:16839542
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15042700) GO_REF:0000107
RGD Ensembl
PMID:15042700
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mir19a
microRNA 19a
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
involved_in
ISO IEA ISS
(PMID:18545679) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18545679
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Ccnd2
cyclin D2
IDA
RGD
PMID:27302109
RGD:151660350
NCBI chr 4:161,653,048...161,675,422
Ensembl chr 4:159,962,363...159,989,495
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISO
(PMID:18371447)
RGD
PMID:18371447
NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179
G
Frs2
fibroblast growth factor receptor substrate 2
involved_in
ISO IEA
UniProtKB:O75084 (PMID:23939491) GO_REF:0000107
RGD Ensembl
PMID:23939491
GO_REF:0000107
NCBI chr 7:54,597,182...54,678,656
Ensembl chr 7:52,711,257...52,792,743
G
Fzd7
frizzled class receptor 7
involved_in
ISO IEA
UniProtKB:Q8WU20 (PMID:23939491) GO_REF:0000107
RGD Ensembl
PMID:23939491
GO_REF:0000107
NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781
G
Hdac3
histone deacetylase 3
acts_upstream_of_or_within
ISO IEA
(PMID:24565863) GO_REF:0000107
RGD Ensembl
PMID:24565863
GO_REF:0000107
NCBI chr18:30,021,847...30,041,061
Ensembl chr18:29,770,636...29,793,856
G
Sox6
SRY-box transcription factor 6
involved_in
ISO IEA
(PMID:20081117) GO_REF:0000107
RGD Ensembl
PMID:20081117
GO_REF:0000107
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Prickle1
prickle planar cell polarity protein 1
involved_in
ISO IEA
(PMID:21199191) GO_REF:0000107
RGD Ensembl
PMID:21199191
GO_REF:0000107
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Apc
APC regulator of WNT signaling pathway
involved_in
IMP
PMID:28948298
BHF-UCL
PMID:28948298
RGD:13464260
NCBI chr18:26,138,382...26,196,021
Ensembl chr18:25,864,222...25,922,696
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
IMP
PMID:26240138
BHF-UCL
PMID:26240138
RGD:13210532
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Cxadr
CXADR, Ig-like cell adhesion molecule
acts_upstream_of_or_within
ISO
MGI:3711226 (PMID:16543498)
RGD
PMID:16543498
NCBI chr11:16,982,864...17,030,078
Ensembl chr11:16,982,860...17,030,046
G
Gja1
gap junction protein, alpha 1
IMP
RGD
PMID:19377854
RGD:7207421
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Hdac2
histone deacetylase 2
acts_upstream_of_or_within
ISO
MGI:3712002 (PMID:17322895)
RGD
PMID:17322895
NCBI chr20:42,101,815...42,126,486
Ensembl chr20:40,548,250...40,571,609
G
Jarid2
jumonji and AT-rich interaction domain containing 2
involved_in acts_upstream_of_or_within
IMP ISO IDA
PMID:26298346 MGI:1856923 (PMID:15870077)
RGD
PMID:15870077 PMID:26298346 PMID:26298346
RGD:11522645 , RGD:11522645
NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
G
Kcnk2
potassium two pore domain channel subfamily K member 2
IMP
RGD
PMID:24705172
RGD:9831164
NCBI chr13:103,297,387...103,494,686
Ensembl chr13:100,766,113...100,963,435
G
Mapk11
mitogen-activated protein kinase 11
acts_upstream_of_or_within
ISO IEA
MGI:3609429 (PMID:21768366) GO_REF:0000107
RGD Ensembl
PMID:21768366
GO_REF:0000107
NCBI chr 7:122,098,120...122,105,023
Ensembl chr 7:120,218,478...120,225,395
G
Mir1
microRNA 1
acts_upstream_of_or_within
ISO
(PMID:17397913)
RGD
PMID:17397913
NCBI chr18:2,160,327...2,160,413
G
Mir873
microRNA 873
involved_in
ISO
(PMID:28583401)
RGD
PMID:28583401
NCBI chr 5:51,356,919...51,356,995
Ensembl chr 5:51,356,919...51,356,995
G
Nog
noggin
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:17218603) GO_REF:0000024
Ensembl RGD UniProt
PMID:17218603
GO_REF:0000024 GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Pten
phosphatase and tensin homolog
involved_in
IMP ISO
RNAcentral:URS000006FDD4_10090|RNAcentral:URS000013D17D_10090 (PMID:23575307)
RGD
PMID:23575307 PMID:30783439
RGD:150527846
NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
G
Rbp4
retinol binding protein 4
involved_in
ISO
(PMID:12663486)
RGD
PMID:12663486
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
G
Sav1
salvador family WW domain containing protein 1
acts_upstream_of_or_within
ISO IEA
MGI:2654594|MGI:4430538 (PMID:21512031) GO_REF:0000107
RGD Ensembl
PMID:21512031
GO_REF:0000107
NCBI chr 6:94,214,514...94,236,354
Ensembl chr 6:88,478,539...88,499,968
G
Tbx5
T-box transcription factor 5
involved_in
ISO IEA ISS
(PMID:11161571) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:11161571
GO_REF:0000024 GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tgfbr2
transforming growth factor, beta receptor 2
IMP
RGD
PMID:15537505
RGD:1601597
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Tp73
tumor protein p73
acts_upstream_of_or_within
ISO IEA
(PMID:18634800) GO_REF:0000107
RGD Ensembl
PMID:18634800
GO_REF:0000107
NCBI chr 5:169,903,801...169,988,075
Ensembl chr 5:164,621,377...164,681,128
G
Vgll4
vestigial-like family member 4
involved_in
ISO IEA
(PMID:27720608) GO_REF:0000107
RGD Ensembl
PMID:27720608
GO_REF:0000107
NCBI chr 4:149,598,151...149,711,186
Ensembl chr 4:147,927,034...148,038,471
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Fgf3
fibroblast growth factor 3
involved_in
ISO IEA
(PMID:20702560) GO_REF:0000107
RGD Ensembl
PMID:20702560
GO_REF:0000107
NCBI chr 1:209,430,457...209,434,832
Ensembl chr 1:200,001,261...200,005,187
G
Fgf8
fibroblast growth factor 8
involved_in
ISO IEA
(PMID:20702560) GO_REF:0000107
RGD Ensembl
PMID:20702560
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:16151019)
Ensembl RGD
PMID:16151019
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
IDA
PMID:16151017
BHF-UCL
PMID:16151017
RGD:8554320
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Egfr
epidermal growth factor receptor
involved_in
ISO
(PMID:23069713)
RGD
PMID:23069713
NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Akap1
A-kinase anchoring protein 1
IMP
RGD
PMID:19358331
RGD:2312604
NCBI chr10:73,621,021...73,654,123
Ensembl chr10:73,621,883...73,653,896
G
Cav3
caveolin 3
IMP
RGD
PMID:21170593
RGD:6784534
NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137
G
Ctdp1
CTD phosphatase subunit 1
IMP
RGD
PMID:22569295
RGD:9686371
NCBI chr18:76,129,243...76,193,404
Ensembl chr18:73,854,282...73,916,457
G
Foxp1
forkhead box P1
IMP
RGD
PMID:26333362
RGD:11561912
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
G6pd
glucose-6-phosphate dehydrogenase
IMP
RGD
PMID:24190878
RGD:10449133
NCBI chr X:157,352,364...157,372,144
Ensembl chr X:152,201,098...152,220,801
G
Gsk3a
glycogen synthase kinase 3 alpha
involved_in
ISO
(PMID:20516643)
RGD
PMID:20516643
NCBI chr 1:89,943,669...89,953,514
Ensembl chr 1:80,815,850...80,825,802
G
Mir451a
microRNA 451a
IMP
RGD
PMID:25209900
RGD:11558015
NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
G
Pak1
p21 (RAC1) activated kinase 1
IMP
RGD
PMID:22082674
RGD:11533929
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
G
Pi16
peptidase inhibitor 16
acts_upstream_of_or_within
ISO
(PMID:17909105)
RGD
PMID:17909105
NCBI chr20:7,376,073...7,385,386
Ensembl chr20:7,376,126...7,385,383
G
Ppara
peroxisome proliferator activated receptor alpha
IMP
RGD
PMID:22198280
RGD:5687133
NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346
G
Rbm10
RNA binding motif protein 10
IMP
RGD
PMID:30257214
RGD:151667449
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
G
Rgs2
regulator of G-protein signaling 2
IMP
RGD
PMID:16380388
RGD:13524577
NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385
G
Rgs4
regulator of G-protein signaling 4
IDA
RGD
PMID:9918533
RGD:7207376
NCBI chr13:84,469,593...84,475,884
Ensembl chr13:81,936,775...81,943,068
G
Tomm70
translocase of outer mitochondrial membrane 70
IMP
RGD
PMID:25022898
RGD:13464131
NCBI chr11:43,378,719...43,417,166
Ensembl chr11:43,377,216...43,417,202
G
Yy1
YY1 transcription factor
IMP
RGD
PMID:18632988
RGD:9588273
NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747
G
Zfp418
zinc finger protein 418
acts_upstream_of_or_within
ISO
(PMID:29065170)
RGD
PMID:29065170
NCBI chr 1:66,581,406...66,594,247
Ensembl chr 1:66,581,287...66,594,242
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tbx3
T-box transcription factor 3
involved_in
ISO IEA
(PMID:22130515) GO_REF:0000107
RGD Ensembl
PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
(PMID:19409885) GO_REF:0000107
RGD Ensembl
PMID:19409885
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:26491108) GO_REF:0000107
RGD Ensembl
PMID:26491108
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:19161227) GO_REF:0000107
RGD Ensembl
PMID:19161227
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15042700) GO_REF:0000107
RGD Ensembl
PMID:15042700
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Alpk2
alpha-kinase 2
involved_in
ISO
(PMID:29888752)
RGD
PMID:29888752
NCBI chr18:58,775,603...58,906,150
Ensembl chr18:58,775,605...58,906,258
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Folr1
folate receptor alpha
involved_in
ISO IEA
(PMID:17286298) GO_REF:0000107
RGD Ensembl
PMID:17286298
GO_REF:0000107
NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Galnt11
polypeptide N-acetylgalactosaminyltransferase 11
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:10,571,464...10,604,974
Ensembl chr 4:9,837,629...9,871,140
G
Notch1
notch receptor 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO IEA
(PMID:19620969) GO_REF:0000107
RGD Ensembl
PMID:19620969
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ankrd11
ankyrin repeat domain containing 11
acts_upstream_of_or_within
ISO
(PMID:38951500)
RGD
PMID:38951500
NCBI chr19:67,848,836...68,007,491
Ensembl chr19:50,940,299...51,098,962
G
Atf2
activating transcription factor 2
acts_upstream_of_or_within
ISO
MGI:1857283 (PMID:17767158)
RGD
PMID:17767158
NCBI chr 3:79,125,814...79,202,896
Ensembl chr 3:58,718,332...58,795,236
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO IEA
RNAcentral:URS00002075FA_10090|RNAcentral:URS0000574A2C_10090|RNAcentral:URS000075EEC2_10090 (PMID:21145505) GO_REF:0000107
RGD Ensembl
PMID:21145505
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
(PMID:19409885) GO_REF:0000107
RGD Ensembl
PMID:19409885
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within involved_in
ISO
MGI:2179740 (PMID:11694877) (PMID:15475956)
RGD
PMID:11694877 PMID:15475956
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:5763397|MGI:5763398 (PMID:25658046)
RGD
PMID:25658046
NCBI chr11:97,033,033...97,067,457
Ensembl chr11:83,526,530...83,563,238
G
Ctnnb1
catenin beta 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:12464179)
Ensembl RGD
PMID:12464179
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Dhrs3
dehydrogenase/reductase 3
acts_upstream_of_or_within
ISO IEA
MGI:5007106 (PMID:24005908) GO_REF:0000107
RGD Ensembl
PMID:24005908
GO_REF:0000107
NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417
G
Dvl1
dishevelled segment polarity protein 1
involved_in
ISO IEA
UniProtKB:Q60838 (PMID:22841628) GO_REF:0000107
RGD Ensembl
PMID:22841628
GO_REF:0000107
NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:166,456,686...166,468,664
G
Dvl2
dishevelled segment polarity protein 2
involved_in
ISO IEA
UniProtKB:P51141 (PMID:12464179), (PMID:22841628) GO_REF:0000107
RGD Ensembl
PMID:12464179 PMID:22841628
GO_REF:0000107
NCBI chr10:55,222,245...55,231,506
Ensembl chr10:54,723,411...54,732,820
G
Eln
elastin
involved_in
ISO IEA
(PMID:8132745) GO_REF:0000107
RGD Ensembl
PMID:8132745
GO_REF:0000107
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:26295701)
RGD
PMID:26295701
NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357
G
Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780|MGI:98493|MGI:99604 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO IEA
MGI:102780|MGI:109344|MGI:98493 (PMID:21364285) GO_REF:0000107
RGD Ensembl
PMID:21364285
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Foxh1
forkhead box H1
involved_in
ISO IEA
(PMID:15363409) GO_REF:0000107
RGD Ensembl
PMID:15363409
GO_REF:0000107
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Fzd1
frizzled class receptor 1
acts_upstream_of_or_within
ISO
MGI:1888513 (PMID:20940229)
RGD
PMID:20940229
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Fzd2
frizzled class receptor 2
acts_upstream_of_or_within
ISO IEA
MGI:1196625 (PMID:20940229) GO_REF:0000107
RGD Ensembl
PMID:20940229
GO_REF:0000107
NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
G
Gja5
gap junction protein, alpha 5
involved_in
ISO IEA
(PMID:22199024) GO_REF:0000107
RGD Ensembl
PMID:22199024
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Greb1l
GREB1 like retinoic acid receptor coactivator
acts_upstream_of_or_within
ISO IEA
(PMID:37852253) GO_REF:0000107
RGD Ensembl
PMID:37852253
GO_REF:0000107
NCBI chr18:1,392,330...1,629,483
Ensembl chr18:1,392,725...1,628,067
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
ISO IEA
(PMID:19008477) GO_REF:0000107
RGD Ensembl
PMID:19008477
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19609448) GO_REF:0000107 (PMID:20122914)
RGD Ensembl
PMID:19609448 PMID:20122914
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
UniProtKB:Q9WV93 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO IEA
MGI:1857719 (PMID:9436976) GO_REF:0000107
RGD Ensembl
PMID:9436976
GO_REF:0000107
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261
G
Ilk
integrin-linked kinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:24131868)
Ensembl RGD
PMID:24131868
GO_REF:0000107
NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:160,088,897...160,095,140
G
Isl1
ISL LIM homeobox 1
involved_in
ISO IEA
UniProtKB:Q02248 (PMID:17519333) GO_REF:0000107
RGD Ensembl
PMID:17519333
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Jun
Jun proto-oncogene, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO IEA
MGI:2149630 (PMID:10352021) GO_REF:0000107
RGD Ensembl
PMID:10352021
GO_REF:0000107
NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:109,893,145...109,897,656
G
Lrp2
LDL receptor related protein 2
acts_upstream_of_or_within
ISO IEA
(PMID:34463328) GO_REF:0000107
RGD Ensembl
PMID:34463328
GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Lrp6
LDL receptor related protein 6
acts_upstream_of
ISO
MGI:98958 (PMID:19056682)
RGD
PMID:19056682
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
G
Mef2c
myocyte enhancer factor 2C
acts_upstream_of_or_within
ISO
MGI:97350 (PMID:19035347)
RGD
PMID:19035347
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Msx2
msh homeobox 2
acts_upstream_of_or_within
ISO IEA
MGI:97168 (PMID:17601530) GO_REF:0000107
RGD Ensembl
PMID:17601530
GO_REF:0000107
NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879
G
Nedd4
NEDD4 E3 ubiquitin protein ligase
acts_upstream_of_or_within
ISO
MGI:3799317|MGI:98737 (PMID:20026598)
RGD
PMID:20026598
NCBI chr 8:82,264,751...82,349,642
Ensembl chr 8:73,383,695...73,468,951
G
Nipbl
NIPBL, cohesin loading factor
involved_in
ISO IEA
(PMID:19242925) GO_REF:0000107
RGD Ensembl
PMID:19242925
GO_REF:0000107
NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:99458 (PMID:16510504), (PMID:19035347) GO_REF:0000107
RGD Ensembl
PMID:16510504 PMID:19035347
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:18593716) GO_REF:0000107
RGD Ensembl
PMID:18593716
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Npy1r
neuropeptide Y receptor Y1
involved_in
ISO
(PMID:19593212)
RGD
PMID:19593212
NCBI chr16:23,037,788...23,047,330
Ensembl chr16:23,037,789...23,046,759
G
Npy2r
neuropeptide Y receptor Y2
involved_in
ISO
(PMID:19593212)
RGD
PMID:19593212
NCBI chr 2:170,200,027...170,210,286
Ensembl chr 2:167,903,879...167,905,024
G
Npy5r
neuropeptide Y receptor Y5
involved_in
ISO IEA
(PMID:19593212) GO_REF:0000107
RGD Ensembl
PMID:19593212
GO_REF:0000107
NCBI chr16:23,055,427...23,063,384
Ensembl chr16:23,055,427...23,063,382
G
Pitx2
paired-like homeodomain 2
involved_in
ISO
(PMID:12464179)
RGD
PMID:12464179
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Plxnd1
plexin D1
acts_upstream_of_or_within
ISO IEA
MGI:5544786 (PMID:23918385) GO_REF:0000107
RGD Ensembl
PMID:23918385
GO_REF:0000107
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:5297388|MGI:5645931 (PMID:25190059), (PMID:26883626)
Ensembl RGD
PMID:25190059 PMID:26883626
GO_REF:0000107
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Ryr1
ryanodine receptor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18003898)
UniProt RGD
PMID:18003898
GO_REF:0000024
NCBI chr 1:93,420,078...93,551,305
Ensembl chr 1:84,292,578...84,423,812
G
Sec24b
SEC24 homolog B, COPII coat complex component
acts_upstream_of_or_within
ISO
MGI:4440621 (PMID:20215345)
RGD
PMID:20215345
NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
G
Sema3c
semaphorin 3C
involved_in
ISO IEA
(PMID:19666519) GO_REF:0000107
RGD Ensembl
PMID:19666519
GO_REF:0000107
NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO IEA
(PMID:19593212) GO_REF:0000107
RGD Ensembl
PMID:19593212
GO_REF:0000107
NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063
G
Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO IEA
MGI:109344|MGI:98493|MGI:99604 (PMID:21364285) GO_REF:0000107
RGD Ensembl
PMID:21364285
GO_REF:0000107
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
MGI:3605892 (PMID:23319608)
RGD
PMID:23319608
NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975
G
Sox11
SRY-box transcription factor 11
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15254231)
UniProt Ensembl RGD
PMID:15254231
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:49,736,773...49,738,794
Ensembl chr 6:44,008,340...44,010,354
G
Sox17
SRY-box transcription factor 17
involved_in
ISO IEA
UniProtKB:P43680 (PMID:17610846) GO_REF:0000107
RGD Ensembl
PMID:17610846
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:102780|MGI:109344|MGI:2179190|MGI:3664784|MGI:99604 (PMID:17916582), (PMID:18583714), (PMID:21364285)
UniProt RGD
PMID:17916582 PMID:18583714 PMID:21364285
GO_REF:0000024
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15042700), (PMID:15459098), (PMID:22186728) GO_REF:0000107
RGD Ensembl
PMID:15042700 PMID:15459098 PMID:22186728
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:2655214 (PMID:18723448) GO_REF:0000107
RGD Ensembl
PMID:18723448
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:2176682 (PMID:11744375)
RGD
PMID:11744375
NCBI chr17:24,230,064...24,253,219
Ensembl chr17:24,024,432...24,047,507
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:22186728) GO_REF:0000107
RGD Ensembl
PMID:22186728
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:17050629) GO_REF:0000107
RGD Ensembl
PMID:17050629
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:17704211)
RGD
PMID:17704211
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Thbs1
thrombospondin 1
acts_upstream_of_or_within
ISO
MGI:97297 (PMID:20026598)
RGD
PMID:20026598
NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:18093989)
RGD
PMID:18093989
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO IEA
MGI:2665014 (PMID:17767158) GO_REF:0000107
RGD Ensembl
PMID:17767158
GO_REF:0000107
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
NOT|involved_in
ISO
(PMID:16140292)
RGD
PMID:16140292
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15070745), (PMID:18924235)
Ensembl RGD
PMID:15070745 PMID:18924235
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
NOT|involved_in
ISO
(PMID:19409885) (PMID:12441304)
RGD
PMID:12441304 PMID:19409885
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Dvl3
dishevelled segment polarity protein 3
acts_upstream_of_or_within
ISO
MGI:3831892 (PMID:19008950)
RGD
PMID:19008950
NCBI chr11:93,869,834...93,887,013
Ensembl chr11:80,366,117...80,382,462
G
Eng
endoglin
involved_in
ISO
UniProtKB:P97471 (PMID:17628518)
RGD
PMID:17628518
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Fgf8
fibroblast growth factor 8
involved_in
ISO IEA
UniProtKB:P70323 (PMID:20807544) GO_REF:0000107
RGD Ensembl
PMID:20807544
GO_REF:0000107
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153818 (PMID:16687131)
RGD
PMID:16687131
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
G
Gata6
GATA binding protein 6
involved_in
ISO
(PMID:19666519)
RGD
PMID:19666519
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q02248 (PMID:17519333)
Ensembl RGD
PMID:17519333
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Msx2
msh homeobox 2
acts_upstream_of_or_within
ISO IEA
MGI:97168 (PMID:17601530) GO_REF:0000107
RGD Ensembl
PMID:17601530
GO_REF:0000107
NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:20807224)
Ensembl RGD
PMID:20807224
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nrp1
neuropilin 1
involved_in
ISO IEA
(PMID:26053665) GO_REF:0000107
RGD Ensembl
PMID:26053665
GO_REF:0000107
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q62181 (PMID:26053665)
Ensembl RGD
PMID:26053665
GO_REF:0000107
NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958
G
Parva
parvin, alpha
involved_in
ISS ISO
GO_REF:0000024 (PMID:19798050)
UniProt RGD
PMID:19798050
GO_REF:0000024
NCBI chr 1:166,547,142...166,704,958
Ensembl chr 1:166,547,132...166,704,950
G
Rara
retinoic acid receptor, alpha
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142
G
Rarb
retinoic acid receptor, beta
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
G
Sema3c
semaphorin 3C
involved_in
ISO IEA
UniProtKB:O35375|UniProtKB:P97333 (PMID:26053665) GO_REF:0000107
RGD Ensembl
PMID:26053665
GO_REF:0000107
NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q63961 (PMID:17628518)
Ensembl RGD
PMID:17628518
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
G
Smad6
SMAD family member 6
involved_in
ISO IEA
(PMID:10655064) GO_REF:0000107
RGD Ensembl
PMID:10655064
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Tbx1
T-box transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:20807544)
UniProt RGD
PMID:20807544
GO_REF:0000024
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15459098) GO_REF:0000107
RGD Ensembl
PMID:15459098
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:18275040), (PMID:18834961) GO_REF:0000107 (PMID:15843409)
RGD Ensembl
PMID:15843409 PMID:18275040 PMID:18834961
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:11390347), (PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007 PMID:11390347
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20652948) GO_REF:0000107
RGD Ensembl
PMID:20652948
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Zfpm2
zinc finger protein, multitype 2
involved_in
ISO IEA
(PMID:20807224) GO_REF:0000107
RGD Ensembl
PMID:20807224
GO_REF:0000107
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO IEA
MGI:3583785 (PMID:16314491) GO_REF:0000107
RGD Ensembl
PMID:16314491
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
G
Ccm2
CCM2 scaffold protein
acts_upstream_of_or_within
ISO IEA
MGI:1924696|MGI:3512761 (PMID:19151727) GO_REF:0000107
RGD Ensembl
PMID:19151727
GO_REF:0000107
NCBI chr14:85,632,338...85,678,016
Ensembl chr14:81,418,236...81,464,116
G
Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:2384924|MGI:3838392 (PMID:19151727)
RGD
PMID:19151727
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
G
Mecom
MDS1 and EVI1 complex locus
acts_upstream_of_or_within
ISO
MGI:2158381 (PMID:17029558)
RGD
PMID:17029558
NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590
G
Nkx2-6
NK2 homeobox 6
involved_in
ISO
(PMID:9545560)
RGD
PMID:9545560
NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
G
Rpgrip1l
Rpgrip1-like
acts_upstream_of_or_within
ISO
MGI:3716208 (PMID:17553904)
RGD
PMID:17553904
NCBI chr19:31,865,050...31,957,930
Ensembl chr19:15,692,150...15,785,083
G
Setd2
SET domain containing 2, histone lysine methyltransferase
acts_upstream_of_or_within
ISO
MGI:4437211 (PMID:20133625)
RGD
PMID:20133625
NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:110,511,772...110,597,489
G
Smad2
SMAD family member 2
acts_upstream_of_or_within
ISO
MGI:1201674 (PMID:15183723)
RGD
PMID:15183723
NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323
G
Smad3
SMAD family member 3
acts_upstream_of_or_within
ISO IEA
MGI:108051 (PMID:15183723) GO_REF:0000107
RGD Ensembl
PMID:15183723
GO_REF:0000107
NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960
G
Tbx5
T-box transcription factor 5
involved_in
ISO IEA ISS
(PMID:15138308) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:15138308
GO_REF:0000024 GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp5
bone morphogenetic protein 5
involved_in
ISO IEA
UniProtKB:P23359 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO IEA
UniProtKB:P49003 (PMID:10079236) GO_REF:0000107
RGD Ensembl
PMID:10079236
GO_REF:0000107
NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
G
Dll4
delta like canonical Notch ligand 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15466159)
Ensembl RGD
PMID:15466159
GO_REF:0000107
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
G
Lrp6
LDL receptor related protein 6
acts_upstream_of acts_upstream_of_or_within
ISO
MGI:98958 (PMID:19056682) MGI:98958 (PMID:19795512)
RGD
PMID:19056682 PMID:19795512
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:14701881), (PMID:20890042), (PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:14701881 PMID:20890042 PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO IEA
MGI:2155441 (PMID:9030684) GO_REF:0000107
RGD Ensembl
PMID:9030684
GO_REF:0000107
NCBI chr 6:20,286,117...20,363,350
Ensembl chr 6:14,533,360...14,611,107
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15901664) GO_REF:0000107
RGD Ensembl
PMID:15901664
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO IEA
MGI:1298218 (PMID:19795512) GO_REF:0000107
RGD Ensembl
PMID:19795512
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mir223
microRNA 223
IMP
RGD
PMID:27226563
RGD:329322878
NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:16140292) GO_REF:0000107
RGD Ensembl
PMID:16140292
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Emp2
epithelial membrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:30773261)
UniProt RGD
PMID:30773261
GO_REF:0000024
NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733
G
Jag1
jagged canonical Notch ligand 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209
G
Notch1
notch receptor 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:22186728) GO_REF:0000107
RGD Ensembl
PMID:22186728
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Arrb2
arrestin, beta 2
involved_in
ISO
(PMID:24974728)
RGD
PMID:24974728
NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850
G
Efnb2
ephrin B2
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr16:87,485,215...87,529,224
Ensembl chr16:80,783,417...80,824,391
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO
(PMID:24974728)
RGD
PMID:24974728
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
G
Kat2a
lysine acetyltransferase 2A
IMP
RGD
PMID:20835911
RGD:8693751
NCBI chr10:86,132,535...86,140,877
Ensembl chr10:85,632,216...85,640,166
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724) (PMID:9857019)
UniProt RGD
PMID:9857019 PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mir1
microRNA 1
involved_in
ISO
(PMID:20081117), (PMID:23939491)
RGD
PMID:20081117 PMID:23939491
NCBI chr18:2,160,327...2,160,413
G
Mir1a-1
microRNA 1a-1
involved_in
ISO
(PMID:20081117), (PMID:23939491)
RGD
PMID:20081117 PMID:23939491
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
G
Mir204
microRNA 204
involved_in
ISO
(PMID:22982025)
RGD
PMID:22982025
NCBI chr 1:229,743,461...229,743,570
Ensembl chr 1:220,316,931...220,317,040
G
Mir499a
microRNA 499a
involved_in
ISO
(PMID:20081117)
RGD
PMID:20081117
NCBI chr 3:144,110,469...144,110,533
Ensembl chr 3:144,110,469...144,110,533
G
Myocd
myocardin
involved_in
ISO
(PMID:18451334)
RGD
PMID:18451334
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nrg1
neuregulin 1
involved_in
ISO
(PMID:17336907)
RGD
PMID:17336907
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO IEA
(PMID:25163461) GO_REF:0000107
RGD Ensembl
PMID:25163461
GO_REF:0000107
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Wnt3a
Wnt family member 3A
acts_upstream_of
ISO IEA
(PMID:20559569) GO_REF:0000107
RGD Ensembl
PMID:20559569
GO_REF:0000107
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:17336907)
Ensembl RGD
PMID:17336907
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:18667463) GO_REF:0000107
RGD Ensembl
PMID:18667463
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Ccnb1
cyclin B1
IDA
RGD
PMID:15253691
RGD:2301353
NCBI chr 2:33,646,252...33,655,225
Ensembl chr 2:31,912,193...31,921,172
G
Ccnd2
cyclin D2
IDA
RGD
PMID:27302109
RGD:151660350
NCBI chr 4:161,653,048...161,675,422
Ensembl chr 4:159,962,363...159,989,495
G
Cdk1
cyclin-dependent kinase 1
IMP
RGD
PMID:15253691
RGD:2301353
NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:19632177)
UniProt RGD
PMID:19632177
GO_REF:0000024
NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:69,531,481...70,596,595
G
Fgf2
fibroblast growth factor 2
involved_in
IDA IEA ISO
GO_REF:0000107 (PMID:9553078)
Ensembl RGD
PMID:9553078 PMID:8603495
GO_REF:0000107, RGD:8655650
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
G
Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
MGI:2135961|MGI:95522|MGI:95523 (PMID:15621532), (PMID:16778080)
RGD
PMID:15621532 PMID:16778080
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
IMP IEA ISO
GO_REF:0000107 MGI:104723|MGI:95523 (PMID:15621532), (PMID:16778080)
Ensembl RGD
PMID:15621532 PMID:16778080 PMID:18275970
GO_REF:0000107, RGD:10402047
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:104723|MGI:95522 (PMID:15621532), (PMID:16778080)
RGD
PMID:15621532 PMID:16778080
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:102541 (PMID:19084512)
RGD
PMID:19084512
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gata6
GATA binding protein 6
acts_upstream_of_or_within
ISO
MGI:102541 (PMID:19084512)
RGD
PMID:19084512
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Gli1
GLI family zinc finger 1
involved_in
ISO IEA
(PMID:28583401) GO_REF:0000107
RGD Ensembl
PMID:28583401
GO_REF:0000107
NCBI chr 7:65,042,237...65,054,888
Ensembl chr 7:63,156,926...63,169,251
G
H19
H19 imprinted maternally expressed transcript
IMP
RGD
PMID:27318893
RGD:156430318
NCBI chr 1:207,160,175...207,162,851
Ensembl chr 1:197,730,698...197,733,134
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:2447620 (PMID:17332425) GO_REF:0000107
RGD Ensembl
PMID:17332425
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Mapk1
mitogen activated protein kinase 1
IMP
RGD
PMID:26884868
RGD:13800890
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616
G
Mapk14
mitogen activated protein kinase 14
acts_upstream_of_or_within
ISO IEA
MGI:1338024 (PMID:21768366) GO_REF:0000107
RGD Ensembl
PMID:21768366
GO_REF:0000107
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,749,670...6,810,589
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724)
UniProt RGD
PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mir222
microRNA 222
IMP
RGD
PMID:25863248
RGD:152025190
NCBI chr X:6,022,621...6,022,723
Ensembl chr X:3,428,904...3,429,006
G
Mir494
microRNA 494
IDA
RGD
PMID:30783439
RGD:150527846
NCBI chr 6:134,550,115...134,550,197
Ensembl chr 6:128,728,709...128,728,793
G
Ncam1
neural cell adhesion molecule 1
IMP
RGD
PMID:19853610
RGD:2325979
NCBI chr 8:58,762,088...59,062,131
Ensembl chr 8:49,865,633...50,166,014
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:20007915) GO_REF:0000107
RGD Ensembl
PMID:20007915
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Nrg1
neuregulin 1
involved_in
ISO
(PMID:9553078)
RGD
PMID:9553078
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Pim1
Pim-1 proto-oncogene, serine/threonine kinase
involved_in
ISO IEA
(PMID:21474815) GO_REF:0000107
RGD Ensembl
PMID:21474815
GO_REF:0000107
NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:17336907)
RGD
PMID:17336907
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Tbx1
T-box transcription factor 1
IMP
RGD
PMID:31982878
RGD:155882591
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tbx2
T-box transcription factor 2
involved_in
ISO IEA
(PMID:15042700) GO_REF:0000107
RGD Ensembl
PMID:15042700
GO_REF:0000107
NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15901664) GO_REF:0000107
RGD Ensembl
PMID:15901664
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:107516|MGI:95664 (PMID:19084512) GO_REF:0000107
RGD Ensembl
PMID:19084512
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:12773577)
RGD
PMID:12773577
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (PMID:20159597)
RGD
PMID:20159597
NCBI chr 4:47,294,300...47,340,284
Ensembl chr 4:46,333,998...46,374,402
G
Yap1
Yes1 associated transcriptional regulator
involved_in
IEA ISO
GO_REF:0000107 (PMID:23918388)
Ensembl RGD
PMID:23918388
GO_REF:0000107
NCBI chr 8:13,380,551...13,451,640
Ensembl chr 8:5,095,722...5,167,010
G
Zfpm2
zinc finger protein, multitype 2
involved_in
ISO IEA
RNAcentral:URS000075EEC2_10090 (PMID:22267003) GO_REF:0000107
RGD Ensembl
PMID:22267003
GO_REF:0000107
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO IEA ISS
(PMID:20702560) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20702560
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO IEA
(PMID:24364879) GO_REF:0000107
RGD Ensembl
PMID:24364879
GO_REF:0000107
NCBI chr 9:73,397,333...73,466,339
Ensembl chr 9:65,903,547...65,970,816
G
Erbb3
erb-b2 receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
(PMID:24364879)
RGD
PMID:24364879
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO IEA
UniProtKB:P21275 (PMID:23863481) GO_REF:0000107
RGD Ensembl
PMID:23863481
GO_REF:0000107
NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788
G
Sema3c
semaphorin 3C
involved_in
ISO IEA
(PMID:26053665) GO_REF:0000107
RGD Ensembl
PMID:26053665
GO_REF:0000107
NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gper1
G protein-coupled estrogen receptor 1
involved_in
ISO
(PMID:23840305)
RGD
PMID:23840305
NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:18667463) GO_REF:0000107
RGD Ensembl
PMID:18667463
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dhx36
DEAH-box helicase 36
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26489465)
UniProt Ensembl RGD
PMID:26489465
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:11889119)
Ensembl RGD
PMID:11889119
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Tbx5
T-box transcription factor 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:11431700)
UniProt Ensembl RGD
PMID:11431700
GO_REF:0000024 GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15896309)
AgBase Ensembl RGD
PMID:15896309
GO_REF:0000024 GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Pim1
Pim-1 proto-oncogene, serine/threonine kinase
involved_in
ISO IEA
(PMID:21474815) GO_REF:0000107
RGD Ensembl
PMID:21474815
GO_REF:0000107
NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Abi3bp
ABI family member 3 binding protein
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
G
Mir133a1
microRNA 133a-1
involved_in
ISO
(PMID:23069713)
RGD
PMID:23069713
NCBI chr18:1,885,082...1,885,168
G
Mir3582
microRNA 3582
involved_in
ISO
(PMID:23069713)
RGD
PMID:23069713
NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adrb1
adrenoceptor beta 1
IMP
RGD
PMID:18194989
RGD:5129139
NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:255,771,597...255,807,259
G
Akap6
A-kinase anchoring protein 6
IMP IDA
RGD
PMID:21550986 PMID:16306226
RGD:6902940 , RGD:2312613
NCBI chr 6:75,919,350...76,359,667
Ensembl chr 6:70,184,175...70,619,738
G
Ccn4
cellular communication network factor 4
IMP
RGD
PMID:21376054
RGD:5129173
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
G
Ddx39b
DExD-box helicase 39B
IMP
RGD
PMID:20116367
RGD:10401141
NCBI chr20:3,577,200...3,589,651
Ensembl chr20:3,572,056...3,584,996
G
Edn1
endothelin 1
involved_in
ISO IEA
RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217) GO_REF:0000107
RGD Ensembl
PMID:24117217
GO_REF:0000107
NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
G
Ep300
E1A binding protein p300
IMP
RGD
PMID:12724418
RGD:2312280
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Fdps
farnesyl diphosphate synthase
IMP
RGD
PMID:19716825
RGD:2316294
NCBI chr 2:176,795,192...176,804,816
Ensembl chr 2:174,486,665...174,507,776
G
Hamp
hepcidin antimicrobial peptide
IMP
RGD
PMID:24424338
RGD:11041632
NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:86,170,901...86,172,891
G
Igf1
insulin-like growth factor 1
involved_in
ISO IEA
RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217) GO_REF:0000107
RGD Ensembl
PMID:24117217
GO_REF:0000107
NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
G
Mir19a
microRNA 19a
acts_upstream_of
ISO
UniProtKB:P05019 (PMID:24117217)
RGD
PMID:24117217
NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
acts_upstream_of
ISO
UniProtKB:P05019 (PMID:24117217)
RGD
PMID:24117217
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
acts_upstream_of
ISO
UniProtKB:P05019 (PMID:24117217)
RGD
PMID:24117217
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:21318349 PMID:21933187
RGD:10040977 , RGD:10040978
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
IMP
RGD
PMID:22989630
RGD:7174736
NCBI chr18:31,522,783...31,644,508
Ensembl chr18:31,271,681...31,393,375
G
Parp2
poly (ADP-ribose) polymerase 2
IMP
RGD
PMID:23261455
RGD:13514044
NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338
G
Pin1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
IMP
RGD
PMID:23487407
RGD:8693424
NCBI chr 8:27,465,538...27,477,016
Ensembl chr 8:19,189,373...19,200,785
G
Sirt1
sirtuin 1
IMP
RGD
PMID:25281201
RGD:13514043
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
G
Slc25a4
solute carrier family 25 member 4
IDA
RGD
PMID:21325829
RGD:9681466
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
G
Trip10
thyroid hormone receptor interactor 10
IMP
RGD
PMID:23915320
RGD:11535145
NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P31266 (PMID:17336907)
Ensembl RGD
PMID:17336907
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:17336907)
RGD
PMID:17336907
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO IEA
MGI:2385468|MGI:2450311 (PMID:17350610) GO_REF:0000107
RGD Ensembl
PMID:17350610
GO_REF:0000107
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:20804746)
RGD
PMID:20804746
NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:19161227) GO_REF:0000107
RGD Ensembl
PMID:19161227
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:17050629) GO_REF:0000107
RGD Ensembl
PMID:17050629
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acacb
acetyl-CoA carboxylase beta
involved_in
ISO IEA
(PMID:18487439) GO_REF:0000107
RGD Ensembl
PMID:18487439
GO_REF:0000107
NCBI chr12:48,026,394...48,138,214
Ensembl chr12:42,366,548...42,457,655
G
Prox1
prospero homeobox 1
involved_in
ISO IEA
(PMID:19091769) GO_REF:0000107
RGD Ensembl
PMID:19091769
GO_REF:0000107
NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
G
Wt1
WT1 transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:8395349)
UniProt RGD
PMID:8395349
GO_REF:0000024
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780 (PMID:21364285)
RGD
PMID:21364285
NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483
G
Gng5
G protein subunit gamma 5
acts_upstream_of_or_within
ISO
(PMID:24599258)
RGD
PMID:24599258
NCBI chr 2:235,394,680...235,403,177
Ensembl chr 1:77,292,043...77,292,513 Ensembl chr11:77,292,043...77,292,513
G
Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO IEA
MGI:109344 (PMID:21364285) GO_REF:0000107
RGD Ensembl
PMID:21364285
GO_REF:0000107
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
G
Tbx1
T-box transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:19745164)
RGD
PMID:19745164
NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:2387851 (PMID:22898775) GO_REF:0000107
RGD Ensembl
PMID:22898775
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Sirt6
sirtuin 6
IMP
RGD
PMID:22335191
RGD:9586060
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724)
UniProt RGD
PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Wnt11
Wnt family member 11
involved_in
ISO IEA
UniProtKB:P22725 (PMID:22569553) GO_REF:0000107
RGD Ensembl
PMID:22569553
GO_REF:0000107
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P48615 (PMID:22569553)
Ensembl RGD
PMID:22569553
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Flrt3
fibronectin leucine rich transmembrane protein 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:18448090)
UniProt Ensembl RGD
PMID:18448090
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
GO:1905314 (PMID:12441304) GO_REF:0000107
RGD Ensembl
PMID:12441304
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
(PMID:22300732)
RGD
PMID:22300732
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:26491108)
RGD
PMID:26491108
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Tnfrsf1a
TNF receptor superfamily member 1A
involved_in
ISO
UniProtKB:P25119 (PMID:26491108)
RGD
PMID:26491108
NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:158,150,820...158,163,591
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO
UniProtKB:P25118 (PMID:26491108)
RGD
PMID:26491108
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:157,070,642...157,104,206
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gja5
gap junction protein, alpha 5
involved_in
ISO IEA
(PMID:22199024) GO_REF:0000107
RGD Ensembl
PMID:22199024
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts19
ADAM metallopeptidase with thrombospondin type 1 motif, 19
involved_in
ISO
(PMID:32323311)
RGD
PMID:32323311
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
G
Adamts5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
involved_in
ISO IEA
(PMID:23531444) GO_REF:0000107
RGD Ensembl
PMID:23531444
GO_REF:0000107
NCBI chr11:38,486,945...38,533,516
Ensembl chr11:25,000,637...25,047,205
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15070745), (PMID:18924235)
Ensembl RGD
PMID:15070745 PMID:18924235
GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
UniProtKB:Q9WV93 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20437614), (PMID:9207787)
Ensembl RGD
PMID:9207787 PMID:20437614
GO_REF:0000107
NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (PMID:9515964)
RGD
PMID:9515964
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Nos3
nitric oxide synthase 3
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q01705 (PMID:27107132)
Ensembl RGD
PMID:27107132
GO_REF:0000107
NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:16025100) GO_REF:0000107 UniProtKB:P70313 (PMID:26491108), (PMID:27107132)
RGD Ensembl
PMID:16025100 PMID:26491108 PMID:27107132
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Notch2
notch receptor 2
involved_in
ISO IEA
(PMID:16773578) GO_REF:0000107
RGD Ensembl
PMID:16773578
GO_REF:0000107
NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
G
Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Smad2
SMAD family member 2
involved_in
ISO
UniProtKB:Q9R001 (PMID:23531444)
RGD
PMID:23531444
NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323
G
Smad6
SMAD family member 6
involved_in
ISO IEA
(PMID:10655064) GO_REF:0000107
RGD Ensembl
PMID:10655064
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:67,444,757...67,464,719
Ensembl chr 8:58,549,736...58,568,860
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dsg2
desmoglein 2
involved_in
ISO IEA
(PMID:16505173) GO_REF:0000107
RGD Ensembl
PMID:16505173
GO_REF:0000107
NCBI chr18:12,121,287...12,179,590
Ensembl chr18:11,846,183...11,904,156
G
Irx3
iroquois homeobox 3
involved_in
ISO IEA
(PMID:26786475) GO_REF:0000107
RGD Ensembl
PMID:26786475
GO_REF:0000107
NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:1857618 (PMID:17250822) GO_REF:0000107
RGD Ensembl
PMID:17250822
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:11390347) GO_REF:0000107
RGD Ensembl
PMID:11390347
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Sox17
SRY-box transcription factor 17
involved_in
ISO IEA
(PMID:17360443) GO_REF:0000107
RGD Ensembl
PMID:17360443
GO_REF:0000107
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Dyrk1a
dual specificity tyrosine phosphorylation regulated kinase 1A
IMP
RGD
PMID:27056896
RGD:401959209
NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
G
Fgf20
fibroblast growth factor 20
acts_upstream_of_or_within
ISO IEA
MGI:1914004 (PMID:20713518) GO_REF:0000107
RGD Ensembl
PMID:20713518
GO_REF:0000107
NCBI chr16:52,030,549...52,038,201
Ensembl chr16:52,010,194...52,038,204
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1891346 (PMID:20713518)
RGD
PMID:20713518
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:3526854 (PMID:15902305)
RGD
PMID:15902305
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Mapk11
mitogen-activated protein kinase 11
acts_upstream_of_or_within
ISO IEA
MGI:1346865 (PMID:21768366) GO_REF:0000107
RGD Ensembl
PMID:21768366
GO_REF:0000107
NCBI chr 7:122,098,120...122,105,023
Ensembl chr 7:120,218,478...120,225,395
G
Mir133a1
microRNA 133a-1
acts_upstream_of_or_within
ISO
MGI:3822152|MGI:3822154 (PMID:19015276)
RGD
PMID:19015276
NCBI chr18:1,885,082...1,885,168
G
Mir3582
microRNA 3582
acts_upstream_of_or_within
ISO
MGI:3822156|MGI:3822158 (PMID:19015276)
RGD
PMID:19015276
NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
(PMID:20713518) GO_REF:0000107
RGD Ensembl
PMID:20713518
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Jph2
junctophilin 2
involved_in
ISO IEA
(PMID:10949023) GO_REF:0000107
RGD Ensembl
PMID:10949023
GO_REF:0000107
NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Eng
endoglin
NOT|involved_in
ISO
(PMID:17628518)
RGD
PMID:17628518
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
IMP
RGD
PMID:18824567
RGD:2325311
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:14701881) GO_REF:0000107
RGD Ensembl
PMID:14701881
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Rac1
Rac family small GTPase 1
involved_in
ISO
(PMID:25514037)
RGD
PMID:25514037
NCBI chr12:16,150,411...16,170,864
Ensembl chr12:11,036,698...11,057,251
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:14701881)
RGD
PMID:14701881
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Col14a1
collagen type XIV alpha 1 chain
acts_upstream_of_or_within
ISO IEA
MGI:3846440 (PMID:22906538) GO_REF:0000107
RGD Ensembl
PMID:22906538
GO_REF:0000107
NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214
G
Dyrk1a
dual specificity tyrosine phosphorylation regulated kinase 1A
IMP
RGD
PMID:21273244
RGD:401940178
NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Eng
endoglin
NOT|involved_in
ISO
(PMID:17628518)
RGD
PMID:17628518
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfb1
transforming growth factor, beta 1
NOT|involved_in
ISO
(PMID:19161227)
RGD
PMID:19161227
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
NOT|involved_in
ISO
(PMID:19161227)
RGD
PMID:19161227
NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Dusp6
dual specificity phosphatase 6
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:3827011 (PMID:18753132)
GO_Central Ensembl RGD
PMID:18753132
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:35,979,502...35,983,834
Ensembl chr 7:34,092,943...34,097,185
G
Mir208a
microRNA 208a
acts_upstream_of_or_within
ISO
(PMID:19726871)
RGD
PMID:19726871
NCBI chr15:28,425,570...28,425,652
G
Myh6
myosin heavy chain 6
acts_upstream_of_or_within
ISO IEA
(PMID:17379774) GO_REF:0000107
RGD Ensembl
PMID:17379774
GO_REF:0000107
NCBI chr15:32,388,102...32,413,663
Ensembl chr15:28,417,616...28,441,720
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Rnf207
ring finger protein 207
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:168,098,074...168,112,585
Ensembl chr 5:162,815,357...162,828,375
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Smo
smoothened, frizzled class receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:11517919)
Ensembl RGD
PMID:11517919
GO_REF:0000107
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:19620969) GO_REF:0000107
RGD Ensembl
PMID:19620969
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Hand2
heart and neural crest derivatives expressed 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19008477)
Ensembl RGD
PMID:19008477
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO IEA
(PMID:19609448) GO_REF:0000107
RGD Ensembl
PMID:19609448
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO IEA
MGI:2447758 (PMID:19620969) GO_REF:0000107
RGD Ensembl
PMID:19620969
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Mks1
MKS transition zone complex subunit 1
acts_upstream_of_or_within
ISO
MGI:4821832 (PMID:27340223)
RGD
PMID:27340223
NCBI chr10:73,152,599...73,167,451
Ensembl chr10:72,655,921...72,666,655
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
(PMID:19620969)
RGD
PMID:19620969
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:20807224)
Ensembl RGD
PMID:20807224
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Zfpm2
zinc finger protein, multitype 2
involved_in
ISO IEA
(PMID:20807224) GO_REF:0000107
RGD Ensembl
PMID:20807224
GO_REF:0000107
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO IEA
MGI:2450311|MGI:4433295 (PMID:26102480) GO_REF:0000107
RGD Ensembl
PMID:26102480
GO_REF:0000107
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Axin2
axin 2
acts_upstream_of_or_within
ISO IEA
MGI:96522 (PMID:22711842) GO_REF:0000107
RGD Ensembl
PMID:22711842
GO_REF:0000107
NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:20702560)
Ensembl UniProt RGD
PMID:20702560
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Foxh1
forkhead box H1
involved_in
ISO IEA
(PMID:15363409) GO_REF:0000107
RGD Ensembl
PMID:15363409
GO_REF:0000107
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Isl1
ISL LIM homeobox 1
involved_in
ISO IEA
(PMID:20520780) GO_REF:0000107
RGD Ensembl
PMID:20520780
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:15890826)
UniProt RGD
PMID:15890826
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18593560) GO_REF:0000107
RGD Ensembl
PMID:18593560
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1270862|MGI:3583755 (PMID:22711842)
RGD
PMID:22711842
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Smarcd3
SWI/SNF related BAF chromatin remodeling complex subunit D3
acts_upstream_of_or_within
ISO IEA
MGI:2148567 (PMID:17519332) GO_REF:0000107
RGD Ensembl
PMID:17519332
GO_REF:0000107
NCBI chr 4:11,441,142...11,472,781
Ensembl chr 4:10,548,751...10,580,326
G
Wnt11
Wnt family member 11
involved_in
ISO IEA
UniProtKB:P22725 (PMID:22569553) GO_REF:0000107
RGD Ensembl
PMID:22569553
GO_REF:0000107
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P48615 (PMID:22569553)
Ensembl RGD
PMID:22569553
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
(PMID:12441304), (PMID:19409885) GO_REF:0000107
RGD Ensembl
PMID:12441304 PMID:19409885
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
(PMID:22300732)
RGD
PMID:22300732
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445238 (PMID:10969038) GO_REF:0000107
RGD Ensembl
PMID:10969038
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:10587520) GO_REF:0000107
RGD Ensembl
PMID:10587520
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:26193633)
Ensembl RGD
PMID:26193633
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Popdc1
popeye domain cAMP effector 1
acts_upstream_of_or_within
ISO
MGI:2385915 (PMID:22354168)
RGD
PMID:22354168
NCBI chr20:48,819,241...48,860,282
Ensembl chr20:48,822,308...48,857,472
G
Popdc2
popeye domain cAMP effector 2
acts_upstream_of_or_within
ISO
MGI:3773727 (PMID:22354168)
RGD
PMID:22354168
NCBI chr11:62,351,843...62,398,688
Ensembl chr11:62,374,759...62,390,756
G
Shox2
SHOX homeobox 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:21640717)
Ensembl RGD
PMID:21640717
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Tbx18
T-box transcription factor 18
involved_in
ISO IEA
(PMID:23242162) GO_REF:0000107
RGD Ensembl
PMID:23242162
GO_REF:0000107
NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058
G
Tbx3
T-box transcription factor 3
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:22130515) GO_REF:0000107 MGI:3710254 (PMID:19096026)
RGD Ensembl
PMID:19096026 PMID:22130515
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:18297060) GO_REF:0000107
RGD Ensembl
PMID:18297060
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tbx18
T-box transcription factor 18
involved_in
ISO IEA
(PMID:23242162) GO_REF:0000107
RGD Ensembl
PMID:23242162
GO_REF:0000107
NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Gata6
GATA binding protein 6
involved_in
ISO
MGI:2177784 (PMID:33443158)
RGD
PMID:33443158
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
Shox2
SHOX homeobox 2
involved_in
ISO IEA
(PMID:19166829) GO_REF:0000107
RGD Ensembl
PMID:19166829
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Tbx18
T-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:3714982 (PMID:19096026)
RGD
PMID:19096026
NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:11572777)
Ensembl RGD
PMID:11572777
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Shox2
SHOX homeobox 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19166829)
Ensembl RGD
PMID:19166829
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724)
UniProt RGD
PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO IEA
(PMID:10393122) GO_REF:0000107
RGD Ensembl
PMID:10393122
GO_REF:0000107
NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mks1
MKS transition zone complex subunit 1
acts_upstream_of_or_within
ISO IEA
MGI:4821832 (PMID:27340223) GO_REF:0000107
RGD Ensembl
PMID:27340223
GO_REF:0000107
NCBI chr10:73,152,599...73,167,451
Ensembl chr10:72,655,921...72,666,655
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tgfbr2
transforming growth factor, beta receptor 2
NOT|involved_in
ISO
(PMID:17050629)
RGD
PMID:17050629
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Tbx20
T-box transcription factor 20
involved_in
ISO IEA
(PMID:15843409) GO_REF:0000107
RGD Ensembl
PMID:15843409
GO_REF:0000107
NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:3574394 (PMID:15297376) GO_REF:0000107
RGD Ensembl
PMID:15297376
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts19
ADAM metallopeptidase with thrombospondin type 1 motif, 19
involved_in
ISO
(PMID:32323311)
RGD
PMID:32323311
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:16037571) GO_REF:0000107
RGD Ensembl
PMID:16037571
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:19409885)
RGD
PMID:19409885
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:20652948) GO_REF:0000107
RGD Ensembl
PMID:20652948
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:21311046) GO_REF:0000107
RGD Ensembl
PMID:21311046
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO IEA
(PMID:23625462) GO_REF:0000107
RGD Ensembl
PMID:23625462
GO_REF:0000107
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:17704211)
RGD
PMID:17704211
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Atg5
autophagy related 5
acts_upstream_of_or_within
ISO IEA
MGI:3050453|MGI:3663625 (PMID:17450150) GO_REF:0000107
RGD Ensembl
PMID:17450150
GO_REF:0000107
NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:16798733)
Ensembl RGD
PMID:16798733
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Ccnb1
cyclin B1
IEP
RGD
PMID:15253691
RGD:2301353
NCBI chr 2:33,646,252...33,655,225
Ensembl chr 2:31,912,193...31,921,172
G
Cdk1
cyclin-dependent kinase 1
IEP
RGD
PMID:15253691
RGD:2301353
NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408
G
Fhl2
four and a half LIM domains 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:15509787)
Ensembl RGD
PMID:15509787
GO_REF:0000107
NCBI chr 9:52,881,091...52,954,540
Ensembl chr 9:45,388,981...45,431,192
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:17332425) GO_REF:0000107
RGD Ensembl
PMID:17332425
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Lmna
lamin A/C
acts_upstream_of_or_within
ISO
MGI:2177930 (PMID:14755333)
RGD
PMID:14755333
NCBI chr 2:176,237,564...176,265,301
Ensembl chr 2:173,939,751...173,960,423
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO IEA
MGI:2386445|MGI:3052104 (PMID:12893741) GO_REF:0000107
RGD Ensembl
PMID:12893741
GO_REF:0000107
NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165
G
Nkx2-6
NK2 homeobox 6
involved_in
ISO
(PMID:9621431)
RGD
PMID:9621431
NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:2386742 (PMID:18292603)
RGD
PMID:18292603
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:16680724)
UniProt RGD
PMID:16680724
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
G
Myocd
myocardin
acts_upstream_of_or_within
ISO
MGI:3052940 (PMID:21357509)
RGD
PMID:21357509
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nrg1
neuregulin 1
involved_in
ISO
(PMID:9553078)
RGD
PMID:9553078
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Rara
retinoic acid receptor, alpha
acts_upstream_of_or_within
ISO IEA
MGI:1857622 (PMID:9428411) GO_REF:0000107
RGD Ensembl
PMID:9428411
GO_REF:0000107
NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142
G
Rarb
retinoic acid receptor, beta
acts_upstream_of_or_within
ISO IEA
MGI:1857851 (PMID:9428411) GO_REF:0000107
RGD Ensembl
PMID:9428411
GO_REF:0000107
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
G
Rxra
retinoid X receptor alpha
acts_upstream_of_or_within
ISO
MGI:2136274|MGI:98215 (PMID:9428411)
RGD
PMID:9428411
NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712
G
Rxrb
retinoid X receptor beta
acts_upstream_of_or_within
ISO
MGI:1857822|MGI:98214 (PMID:9428411)
RGD
PMID:9428411
NCBI chr20:4,818,707...4,824,968
Ensembl chr20:4,816,815...4,828,773
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9
involved_in
ISO
(PMID:20096780)
RGD
PMID:20096780
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
G
Col14a1
collagen type XIV alpha 1 chain
acts_upstream_of_or_within
ISO IEA
MGI:3846440 (PMID:22906538) GO_REF:0000107
RGD Ensembl
PMID:22906538
GO_REF:0000107
NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:102541 (PMID:19084512)
RGD
PMID:19084512
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Kcnj11
potassium inwardly-rectifying channel, subfamily J, member 11
acts_upstream_of_or_within
ISO IEA
MGI:1100508 (PMID:16501027) GO_REF:0000107
RGD Ensembl
PMID:16501027
GO_REF:0000107
NCBI chr 1:105,727,473...105,731,167
Ensembl chr 1:96,591,049...96,594,082
G
Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO IEA
MGI:107501 (PMID:16501027) GO_REF:0000107
RGD Ensembl
PMID:16501027
GO_REF:0000107
NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603
G
Marcks
myristoylated alanine rich protein kinase C substrate
IEP
RGD
PMID:9205551
RGD:9685305
NCBI chr20:42,240,185...42,245,882
Ensembl chr20:40,685,315...40,691,012
G
Mbd1
methyl-CpG binding domain protein 1
IEP
RGD
PMID:20735989
RGD:9588647
NCBI chr18:70,145,093...70,159,744
Ensembl chr18:67,869,992...67,886,554
G
Mbd2
methyl-CpG binding domain protein 2
IEP
RGD
PMID:20735989
RGD:9588647
NCBI chr18:66,449,196...66,516,112
Ensembl chr18:64,174,002...64,240,794
G
Mbd3
methyl-CpG binding domain protein 3
IEP
RGD
PMID:20735989
RGD:9588647
NCBI chr 7:9,961,053...9,970,845
Ensembl chr 7:9,313,098...9,320,165
G
Mecp2
methyl CpG binding protein 2
IEP
RGD
PMID:20735989
RGD:9588647
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Ppp1r13l
protein phosphatase 1, regulatory subunit 13 like
acts_upstream_of_or_within
ISO IEA
MGI:3575541 (PMID:15661756) GO_REF:0000107
RGD Ensembl
PMID:15661756
GO_REF:0000107
NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712
G
Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO IEA
MGI:95664 (PMID:19084512) GO_REF:0000107
RGD Ensembl
PMID:19084512
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Zmpste24
zinc metallopeptidase STE24
acts_upstream_of_or_within
ISO IEA
MGI:2180033 (PMID:27799555) GO_REF:0000107
RGD Ensembl
PMID:27799555
GO_REF:0000107
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (PMID:15073151), (PMID:17336907)
Ensembl RGD
PMID:15073151 PMID:17336907
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
G
Col11a1
collagen type XI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:1856399 (PMID:17029294)
RGD
PMID:17029294
NCBI chr 2:204,509,136...204,702,264
Ensembl chr 2:201,820,715...202,013,853
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153818 (PMID:16687131)
RGD
PMID:16687131
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
G
Fkbp1a
FKBP prolyl isomerase 1A
involved_in
ISO
(PMID:9461216)
RGD
PMID:9461216
NCBI chr 3:160,500,748...160,520,492
Ensembl chr 3:140,040,278...140,060,743
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO IEA
MGI:1347481 (PMID:16839542) GO_REF:0000107
RGD Ensembl
PMID:16839542
GO_REF:0000107
NCBI chr17:32,840,119...32,844,100
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (PMID:16839542)
RGD
PMID:16839542
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
G
Hand1
heart and neural crest derivatives expressed 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:18276607) GO_REF:0000107 MGI:2153823 (PMID:9500551)
RGD Ensembl
PMID:9500551 PMID:18276607
GO_REF:0000107
NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q02248 (PMID:17519333)
Ensembl RGD
PMID:17519333
GO_REF:0000107
NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584
G
Ly6e
lymphocyte antigen 6 family member E
acts_upstream_of_or_within
ISO
MGI:2429638 (PMID:11784869)
RGD
PMID:11784869
NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689
G
Mybpc3
myosin binding protein C3
involved_in
ISO
(PMID:11815426), (PMID:16754800)
RGD
PMID:11815426 PMID:16754800
NCBI chr 3:97,550,974...97,569,216
Ensembl chr 3:77,095,252...77,113,405
G
Myh6
myosin heavy chain 6
involved_in
ISO IEA
(PMID:11815426), (PMID:15998695) GO_REF:0000107
RGD Ensembl
PMID:11815426 PMID:15998695
GO_REF:0000107
NCBI chr15:32,388,102...32,413,663
Ensembl chr15:28,417,616...28,441,720
G
Myh7
myosin heavy chain 7
involved_in
ISO IEA
(PMID:15856146), (PMID:16754800) GO_REF:0000107
RGD Ensembl
PMID:15856146 PMID:16754800
GO_REF:0000107
NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
G
Myl2
myosin light chain 2
involved_in
ISO IEA
(PMID:8673105) GO_REF:0000107
RGD Ensembl
PMID:8673105
GO_REF:0000107
NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
G
Myl3
myosin light chain 3
involved_in
ISO IEA
(PMID:16754800), (PMID:8673105) GO_REF:0000107
RGD Ensembl
PMID:8673105 PMID:16754800
GO_REF:0000107
NCBI chr 8:110,738,669...110,744,814
Ensembl chr 8:110,738,661...110,744,816
G
Pkp2
plakophilin 2
involved_in
ISO
(PMID:22889254)
RGD
PMID:22889254
NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
G
Prox1
prospero homeobox 1
involved_in
ISO IEA
(PMID:19091769) GO_REF:0000107
RGD Ensembl
PMID:19091769
GO_REF:0000107
NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
G
Ptcd2
pentatricopeptide repeat domain 2
acts_upstream_of_or_within
ISO IEA
MGI:3830811 (PMID:18729827) GO_REF:0000107
RGD Ensembl
PMID:18729827
GO_REF:0000107
NCBI chr 2:30,712,276...30,739,968
Ensembl chr 2:30,712,280...30,739,942
G
Rxra
retinoid X receptor alpha
acts_upstream_of_or_within
ISO
MGI:2136274 (PMID:9428411)
RGD
PMID:9428411
NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:18952608)
Ensembl RGD
PMID:18952608
GO_REF:0000107
NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO IEA
(PMID:8009224) GO_REF:0000107
RGD Ensembl
PMID:8009224
GO_REF:0000107
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:12773577)
RGD
PMID:12773577
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Tnnc1
troponin C1, slow skeletal and cardiac type
involved_in
ISO IEA
(PMID:15542288) GO_REF:0000107
RGD Ensembl
PMID:15542288
GO_REF:0000107
NCBI chr16:6,408,607...6,412,070
Ensembl chr16:6,402,171...6,405,634
G
Tnni1
troponin I1, slow skeletal type
acts_upstream_of_or_within
ISO
MGI:2387868 (PMID:9915769)
RGD
PMID:9915769
NCBI chr13:49,781,529...49,793,385
Ensembl chr13:47,229,216...47,241,644
G
Tnni3
troponin I3, cardiac type
involved_in
ISO IEA
(PMID:11815426), (PMID:16754800) GO_REF:0000107
RGD Ensembl
PMID:11815426 PMID:16754800
GO_REF:0000107
NCBI chr 1:78,342,571...78,346,255
Ensembl chr 1:69,299,900...69,303,580
G
Tnnt2
troponin T2, cardiac type
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:3693250 (PMID:16326803) GO_REF:0000107 (PMID:16754800)
UniProt RGD Ensembl
PMID:16326803 PMID:16754800
GO_REF:0000024 GO_REF:0000107
NCBI chr13:49,819,123...49,837,125
Ensembl chr13:47,267,204...47,285,388
G
Tpm1
tropomyosin 1
involved_in
ISO IEA
(PMID:11136687) (PMID:17556658) GO_REF:0000107
RGD Ensembl
PMID:11136687 PMID:17556658
GO_REF:0000107
NCBI chr 8:76,516,654...76,543,661
Ensembl chr 8:67,635,479...67,662,802
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Mef2a
myocyte enhancer factor 2a
involved_in
ISO IEA
(PMID:12379849) GO_REF:0000107
RGD Ensembl
PMID:12379849
GO_REF:0000107
NCBI chr 1:120,847,874...120,982,488
Ensembl chr 1:120,850,080...120,981,948
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:3042511 (PMID:19546853) GO_REF:0000107
RGD Ensembl
PMID:19546853
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Prox1
prospero homeobox 1
involved_in
ISO IEA
(PMID:19091769) GO_REF:0000107
RGD Ensembl
PMID:19091769
GO_REF:0000107
NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Dsp
desmoplakin
involved_in
ISO IEA
(PMID:16917092) GO_REF:0000107
RGD Ensembl
PMID:16917092
GO_REF:0000107
NCBI chr17:26,623,602...26,671,692
Ensembl chr17:26,623,588...26,671,800
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26822476) GO_REF:0000107
UniProt RGD Ensembl
PMID:26822476
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Pou4f1
POU class 4 homeobox 1
involved_in
ISO
(PMID:18368538)
RGD
PMID:18368538
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:12773577), (PMID:17704211)
RGD
PMID:12773577 PMID:17704211
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Ap2b1
adaptor related protein complex 2 subunit beta 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr10:68,596,925...68,702,547
Ensembl chr10:68,099,547...68,205,013
G
Ccn1
cellular communication network factor 1
acts_upstream_of_or_within
ISO
MGI:2446577 (PMID:17023674)
RGD
PMID:17023674
NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2176158|MGI:2385355 (PMID:12149478), (PMID:15750185)
RGD
PMID:12149478 PMID:15750185
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Cntrl
centriolin
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 3:18,428,147...18,500,362
Ensembl chr 3:18,428,103...18,500,380
G
Cplane1
ciliogenesis and planar polarity effector complex subunit 1
acts_upstream_of_or_within
ISO
MGI:5297398 (PMID:25877302)
RGD
PMID:25877302
NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
G
Cxcr4
C-X-C motif chemokine receptor 4
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr13:42,630,383...42,634,288
Ensembl chr13:40,077,976...40,081,883
G
Dand5
DAN domain BMP antagonist family member 5
involved_in
ISO
(PMID:15466485)
RGD
PMID:15466485
NCBI chr19:40,231,061...40,245,329
Ensembl chr19:23,334,164...23,339,589
G
Dctn5
dynactin subunit 5
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:176,689,176...176,705,907
Ensembl chr 1:176,689,156...176,705,906
G
Dnm2
dynamin 2
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:28,254,344...28,336,297
Ensembl chr 8:19,978,400...20,060,157
G
Frs2
fibroblast growth factor receptor substrate 2
acts_upstream_of_or_within
ISO IEA
MGI:2654594|MGI:3768912 (PMID:17868091) GO_REF:0000107
RGD Ensembl
PMID:17868091
GO_REF:0000107
NCBI chr 7:54,597,182...54,678,656
Ensembl chr 7:52,711,257...52,792,743
G
Gata3
GATA binding protein 3
involved_in
ISO IEA
(PMID:18955134) GO_REF:0000107
RGD Ensembl
PMID:18955134
GO_REF:0000107
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Gata4
GATA binding protein 4
involved_in
ISO
(PMID:17643447)
RGD
PMID:17643447
NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
G
Gja5
gap junction protein, alpha 5
involved_in
ISO IEA
(PMID:22199024) GO_REF:0000107
RGD Ensembl
PMID:22199024
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Hectd1
HECT domain E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:74,916,803...75,003,408
Ensembl chr 6:69,181,436...69,268,053
G
Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:3838392 (PMID:19151727)
RGD
PMID:19151727
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
G
Hes1
hes family bHLH transcription factor 1
involved_in
ISO IEA
(PMID:20122914) GO_REF:0000107
RGD Ensembl
PMID:20122914
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Hoxa13
homeo box A13
acts_upstream_of_or_within
ISO IEA
MGI:2152356 (PMID:18483557) GO_REF:0000107
RGD Ensembl
PMID:18483557
GO_REF:0000107
NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
G
Lmo4
LIM domain only 4
acts_upstream_of_or_within
ISO
MGI:3035914 (PMID:20549734)
RGD
PMID:20549734
NCBI chr 2:235,924,574...235,941,609
Ensembl chr 2:233,264,182...233,280,880
G
Lrp2
LDL receptor related protein 2
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708
G
Ltbp1
latent transforming growth factor beta binding protein 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
G
Luzp1
leucine zipper protein 1
acts_upstream_of_or_within
ISO IEA
MGI:3818454 (PMID:18801334) GO_REF:0000107
RGD Ensembl
PMID:18801334
GO_REF:0000107
NCBI chr 5:153,989,570...154,065,071
Ensembl chr 5:148,706,138...148,781,609
G
Matr3
matrin 3
acts_upstream_of_or_within
ISO
(PMID:25574029)
RGD
PMID:25574029
NCBI chr18:27,154,098...27,193,212
Ensembl chr18:27,163,714...27,193,166
G
Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO IEA
MGI:107934 (PMID:22821713) GO_REF:0000107
RGD Ensembl
PMID:22821713
GO_REF:0000107
NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915
G
Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (PMID:22821713)
RGD
PMID:22821713
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
G
Nprl3
NPR3-like, GATOR1 complex subunit
acts_upstream_of_or_within
ISO IEA
MGI:5426855 (PMID:22538705) GO_REF:0000107
RGD Ensembl
PMID:22538705
GO_REF:0000107
NCBI chr10:15,859,739...15,900,261
Ensembl chr10:15,355,355...15,395,810
G
Pax8
paired box 8
involved_in
ISO IEA
(PMID:22453009) GO_REF:0000107
RGD Ensembl
PMID:22453009
GO_REF:0000107
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
G
Pde2a
phosphodiesterase 2A
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
G
Prdm1
PR/SET domain 1
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488
G
Ptk7
protein tyrosine kinase 7
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
G
Robo1
roundabout guidance receptor 1
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within involved_in
ISO
MGI:2139360 (PMID:16790473) (PMID:18470945)
RGD
PMID:16790473 PMID:18470945
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
G
Sall4
spalt-like transcription factor 4
acts_upstream_of_or_within
ISO IEA
MGI:1889585|MGI:3699175 (PMID:16790473) GO_REF:0000107
RGD Ensembl
PMID:16790473
GO_REF:0000107
NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822
G
Smad6
SMAD family member 6
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
(PMID:25807483)
RGD
PMID:25807483
NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975
G
Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:67,444,757...67,464,719
Ensembl chr 8:58,549,736...58,568,860
G
Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO IEA
(PMID:25807483) GO_REF:0000107
RGD Ensembl
PMID:25807483
GO_REF:0000107
NCBI chr 1:255,199,108...255,296,983
Ensembl chr 1:245,257,768...245,355,577
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:19727199)
Ensembl RGD
PMID:19727199
GO_REF:0000107
NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885
G
Trip11
thyroid hormone receptor interactor 11
acts_upstream_of_or_within
ISO IEA
MGI:3836913 (PMID:19112494) GO_REF:0000107
RGD Ensembl
PMID:19112494
GO_REF:0000107
NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781
G
Wnt11
Wnt family member 11
involved_in
ISO IEA
UniProtKB:P22725 (PMID:22569553) GO_REF:0000107
RGD Ensembl
PMID:22569553
GO_REF:0000107
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Wnt5a
Wnt family member 5A
involved_in
ISO IEA
UniProtKB:P48615 (PMID:22569553) GO_REF:0000107
RGD Ensembl
PMID:22569553
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Xirp2
xin actin-binding repeat containing 2
acts_upstream_of_or_within
ISO
MGI:4453315 (PMID:20360251)
RGD
PMID:20360251
NCBI chr 3:72,534,175...72,621,056
Ensembl chr 3:51,870,092...52,213,091
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:16140292) GO_REF:0000107
RGD Ensembl
PMID:16140292
GO_REF:0000107
NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241
G
Adamts19
ADAM metallopeptidase with thrombospondin type 1 motif, 19
involved_in
ISO
(PMID:32323311)
RGD
PMID:32323311
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
G
Aplnr
apelin receptor
involved_in
ISO IEA
(PMID:23603510) GO_REF:0000107
RGD Ensembl
PMID:23603510
GO_REF:0000107
NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:11854453) GO_REF:0000107
RGD Ensembl
PMID:11854453
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO IEA
(PMID:12441304), (PMID:19409885) GO_REF:0000107
RGD Ensembl
PMID:12441304 PMID:19409885
GO_REF:0000107
NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
ISO
(PMID:15475956)
RGD
PMID:15475956
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
G
Egln1
egl-9 family hypoxia-inducible factor 1
acts_upstream_of_or_within
ISO
MGI:3690045 (PMID:16966370)
RGD
PMID:16966370
NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
G
Fgfrl1
fibroblast growth factor receptor-like 1
acts_upstream_of_or_within
ISO IEA
MGI:3849002 (PMID:19383940) GO_REF:0000107
RGD Ensembl
PMID:19383940
GO_REF:0000107
NCBI chr14:1,009,863...1,022,620
Ensembl chr14:1,009,786...1,021,928
G
Fzd1
frizzled class receptor 1
acts_upstream_of_or_within
ISO
MGI:1888513 (PMID:20940229)
RGD
PMID:20940229
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Fzd2
frizzled class receptor 2
acts_upstream_of_or_within
ISO IEA
MGI:1196625 (PMID:20940229) GO_REF:0000107
RGD Ensembl
PMID:20940229
GO_REF:0000107
NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
G
Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO IEA
MGI:2445238 (PMID:10969038) GO_REF:0000107
RGD Ensembl
PMID:10969038
GO_REF:0000107
NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (PMID:17303760)
RGD
PMID:17303760
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO IEA
(PMID:12372254) GO_REF:0000107
RGD Ensembl
PMID:12372254
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO IEA
UniProtKB:Q9WV93 (PMID:17303760) GO_REF:0000107
RGD Ensembl
PMID:17303760
GO_REF:0000107
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Lrp6
LDL receptor related protein 6
acts_upstream_of
ISO
MGI:98958 (PMID:19056682)
RGD
PMID:19056682
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
G
Mir17
microRNA 17
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:98,587,848...98,587,931
Ensembl chr15:92,180,629...92,180,712
G
Mir18a
microRNA 18a
acts_upstream_of_or_within
ISO
MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860
G
Mir19a
microRNA 19a
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir20a
microRNA 20a
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168
G
Mir92a1
microRNA 92a-1
acts_upstream_of_or_within
ISO
MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (PMID:18329372)
RGD
PMID:18329372
NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (PMID:9515964)
RGD
PMID:9515964
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:10587520), (PMID:20807224)
Ensembl RGD
PMID:10587520 PMID:20807224
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Nog
noggin
involved_in
ISO IEA
(PMID:17218603) GO_REF:0000107
RGD Ensembl
PMID:17218603
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Nos3
nitric oxide synthase 3
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q01705 (PMID:27107132)
Ensembl RGD
PMID:27107132
GO_REF:0000107
NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:16025100) GO_REF:0000107 UniProtKB:P70313 (PMID:26491108), (PMID:27107132)
RGD Ensembl
PMID:16025100 PMID:26491108 PMID:27107132
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:2386742 (PMID:18292603)
RGD
PMID:18292603
NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293
G
Prox1
prospero homeobox 1
involved_in
ISO IEA
(PMID:19091769) GO_REF:0000107
RGD Ensembl
PMID:19091769
GO_REF:0000107
NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183
G
Rbm15
RNA binding motif protein 15
acts_upstream_of_or_within
ISO IEA
MGI:2656539|MGI:3706994 (PMID:18981216) GO_REF:0000107
RGD Ensembl
PMID:18981216
GO_REF:0000107
NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:26491108)
RGD
PMID:26491108
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (PMID:25691540)
RGD
PMID:25691540
NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536
G
Sav1
salvador family WW domain containing protein 1
acts_upstream_of_or_within
ISO IEA
MGI:2654594|MGI:4430538 (PMID:21512031) GO_REF:0000107
RGD Ensembl
PMID:21512031
GO_REF:0000107
NCBI chr 6:94,214,514...94,236,354
Ensembl chr 6:88,478,539...88,499,968
G
Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:25691540)
RGD
PMID:25691540
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Slit3
slit guidance ligand 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25691540)
Ensembl RGD
PMID:25691540
GO_REF:0000107
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:16151019)
Ensembl RGD
PMID:16151019
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:18952608)
Ensembl RGD
PMID:18952608
GO_REF:0000107
NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765
G
Sox11
SRY-box transcription factor 11
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15254231)
UniProt Ensembl RGD
PMID:15254231
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:49,736,773...49,738,794
Ensembl chr 6:44,008,340...44,010,354
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:16109771)
RGD
PMID:16109771
NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO IEA
MGI:3710254 (PMID:18467625) GO_REF:0000107
RGD Ensembl
PMID:18467625
GO_REF:0000107
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(PMID:17050629) GO_REF:0000107
RGD Ensembl
PMID:17050629
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:17704211)
RGD
PMID:17704211
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO IEA
MGI:2665014 (PMID:17767158) GO_REF:0000107
RGD Ensembl
PMID:17767158
GO_REF:0000107
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO IEA
(PMID:14614148) GO_REF:0000107
RGD Ensembl
PMID:14614148
GO_REF:0000107
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
G
Zfpm2
zinc finger protein, multitype 2
involved_in
ISO IEA
(PMID:20807224) GO_REF:0000107
RGD Ensembl
PMID:20807224
GO_REF:0000107
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO IEA
(PMID:11854453), (PMID:15073157) GO_REF:0000107
RGD Ensembl
PMID:11854453 PMID:15073157
GO_REF:0000107
NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
G
Ccm2l
CCM2 like scaffold protein
acts_upstream_of_or_within
ISO
MGI:1924696 (PMID:22898778)
RGD
PMID:22898778
NCBI chr 3:141,533,470...141,549,136
Ensembl chr 3:141,533,511...141,549,140
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO IEA
MGI:2176467|MGI:4433295 (PMID:26102480) GO_REF:0000107
RGD Ensembl
PMID:26102480
GO_REF:0000107
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Dll4
delta like canonical Notch ligand 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:15466159)
Ensembl RGD
PMID:15466159
GO_REF:0000107
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
G
Eng
endoglin
involved_in
ISO
(PMID:19703439)
RGD
PMID:19703439
NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
G
Foxh1
forkhead box H1
involved_in
ISO IEA
(PMID:15363409) GO_REF:0000107
RGD Ensembl
PMID:15363409
GO_REF:0000107
NCBI chr 7:110,268,608...110,272,105
Ensembl chr 7:108,387,969...108,390,049
G
Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:2385159 (PMID:22898778)
RGD
PMID:22898778
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (PMID:15680351)
RGD
PMID:15680351
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO IEA
MGI:1341800 (PMID:15680351) GO_REF:0000107
RGD Ensembl
PMID:15680351
GO_REF:0000107
NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
G
Med1
mediator complex subunit 1
involved_in
ISO IEA
(PMID:11724781) GO_REF:0000107
RGD Ensembl
PMID:11724781
GO_REF:0000107
NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299
G
Nkx2-5
NK2 homeobox 5
acts_upstream_of_or_within
ISO IEA
MGI:3042511 (PMID:15109497) GO_REF:0000107
RGD Ensembl
PMID:15109497
GO_REF:0000107
NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
G
Nrg1
neuregulin 1
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:17336907)
RGD
PMID:17336907
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO IEA
(PMID:9217007) GO_REF:0000107
RGD Ensembl
PMID:9217007
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18718461)
Ensembl RGD
PMID:18718461
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Ube4b
ubiquitination factor E4B
acts_upstream_of_or_within
ISO IEA
MGI:3611069 (PMID:16314518) GO_REF:0000107
RGD Ensembl
PMID:16314518
GO_REF:0000107
NCBI chr 5:165,049,897...165,153,572
Ensembl chr 5:159,766,829...159,870,509
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO IEA
MGI:3715149|MGI:3801682 (PMID:21350214) GO_REF:0000107
RGD Ensembl
PMID:21350214
GO_REF:0000107
NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
G
Wt1
WT1 transcription factor
involved_in
ISO IEA ISS
UniProtKB:P22561 (PMID:10101119) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:10101119
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all