Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tnnc1 (troponin C1, slow skeletal and cardiac type) Rattus norvegicus
Symbol: Tnnc1
Name: troponin C1, slow skeletal and cardiac type
RGD ID: 1309921
Description: Exhibits calcium ion binding activity. Involved in cardiac muscle contraction; diaphragm contraction; and response to metal ion. Localizes to contractile fiber. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1Z; hypertrophic cardiomyopathy; and hypertrophic cardiomyopathy 13. Orthologous to human TNNC1 (troponin C1, slow skeletal and cardiac type); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
Also known as: LOC290561; Tncc; troponin C type 1 (slow); troponin C, cardiac/slow skeletal; troponin C, slow skeletal and cardiac muscles
Homo sapiens (human) : TNNC1 (troponin C1, slow skeletal and cardiac type)  HGNC  Alliance
Mus musculus (house mouse) : Tnnc1 (troponin C, cardiac/slow skeletal)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnnc1 (troponin C1, slow skeletal and cardiac type)
Pan paniscus (bonobo/pygmy chimpanzee) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Canis lupus familiaris (dog) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnnc1 (troponin C1, slow skeletal and cardiac type)
Sus scrofa (pig) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Chlorocebus sabaeus (African green monkey) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Heterocephalus glaber (naked mole-rat) : Tnnc1 (troponin C1, slow skeletal and cardiac type)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0167,292,207 - 7,295,238 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,292,096 - 7,295,465 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,220,777 - 7,223,730 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,639,357 - 6,642,331 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1166,639,312 - 6,642,502 (+)NCBI
Celera168,783,769 - 8,786,737 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Tnnc1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309921
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.