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Gene: Tnnc1 (troponin C1, slow skeletal and cardiac type) Rattus norvegicus
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Symbol: Tnnc1
Name: troponin C1, slow skeletal and cardiac type
RGD ID: 1309921
Description: Exhibits calcium ion binding activity. Involved in cardiac muscle contraction; diaphragm contraction; and response to metal ion. Localizes to contractile fiber. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1Z; hypertrophic cardiomyopathy; and hypertrophic cardiomyopathy 13. Orthologous to human TNNC1 (troponin C1, slow skeletal and cardiac type); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC290561; Tncc; troponin C type 1 (slow); troponin C, cardiac/slow skeletal; troponin C, slow skeletal and cardiac muscles
Orthologs:
Homo sapiens (human) : TNNC1 (troponin C1, slow skeletal and cardiac type)  HGNC  Alliance
Mus musculus (house mouse) : Tnnc1 (troponin C, cardiac/slow skeletal)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnnc1 (troponin C1, slow skeletal and cardiac type)
Pan paniscus (bonobo/pygmy chimpanzee) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Canis lupus familiaris (dog) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnnc1 (troponin C1, slow skeletal and cardiac type)
Sus scrofa (pig) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Chlorocebus sabaeus (African green monkey) : TNNC1 (troponin C1, slow skeletal and cardiac type)
Heterocephalus glaber (naked mole-rat) : Tnnc1 (troponin C1, slow skeletal and cardiac type)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0167,292,207 - 7,295,238 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,292,096 - 7,295,465 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,220,777 - 7,223,730 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,639,357 - 6,642,331 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1166,639,312 - 6,642,502 (+)NCBI
Celera168,783,769 - 8,786,737 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tnnc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309921
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.