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Gene: Sgcb (sarcoglycan, beta) Rattus norvegicus
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Symbol: Sgcb
Name: sarcoglycan, beta
Description: Predicted to be involved in cardiac muscle cell development; muscle fiber development; and vascular smooth muscle cell development. Predicted to localize to the sarcoglycan complex and sarcolemma. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2E and muscular dystrophy. Orthologous to human SGCB (sarcoglycan beta); PARTICIPATES IN arrhythmogenic right ventricular cardiomyopathy pathway; dilated cardiomyopathy pathway; hypertrophic cardiomyopathy pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: beta-sarcoglycan; LOC680229; sarcoglycan, beta (dystrophin-associated glycoprotein); similar to Beta-sarcoglycan (Beta-SG) (43 kDa dystrophin-associated glycoprotein) (43DAG)
Orthologs:
Homo sapiens (human) : SGCB (sarcoglycan beta)  HGNC  Alliance
Mus musculus (house mouse) : Sgcb (sarcoglycan, beta (dystrophin-associated glycoprotein))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgcb (sarcoglycan beta)
Pan paniscus (bonobo/pygmy chimpanzee) : SGCB (sarcoglycan beta)
Canis lupus familiaris (dog) : SGCB (sarcoglycan beta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgcb (sarcoglycan beta)
Sus scrofa (pig) : SGCB (sarcoglycan beta)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01437,113,194 - 37,128,623 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1437,113,210 - 37,128,737 (+)Ensembl
Rnor_5.01436,936,100 - 36,951,529 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41436,959,920 - 36,974,916 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1433,826,171 - 33,841,169 (+)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sgcb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1594202
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.