Vegfa (vascular endothelial growth factor A) - Rat Genome Database

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Gene: Vegfa (vascular endothelial growth factor A) Rattus norvegicus
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Symbol: Vegfa
Name: vascular endothelial growth factor A
RGD ID: 619991
Description: Enables several functions, including identical protein binding activity; receptor ligand activity; and vascular endothelial growth factor receptor 2 binding activity. Involved in several processes, including positive regulation of macromolecule biosynthetic process; response to steroid hormone; and response to vitamin. Located in basement membrane; extracellular space; and vesicle. Used to study several diseases, including brain edema; limb ischemia; middle cerebral artery infarction; ovarian hyperstimulation syndrome; and proliferative diabetic retinopathy. Biomarker of several diseases, including adhesions of uterus; attention deficit hyperactivity disorder; brain edema; liver disease (multiple); and retinal vascular disease (multiple). Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); gastrointestinal system cancer (multiple); hematologic cancer (multiple); hypertension (multiple); and reproductive organ cancer (multiple). Orthologous to human VEGFA (vascular endothelial growth factor A); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; vascular endothelial growth factor signaling pathway; altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; INTERACTS WITH (+)-pilocarpine; (R)-lipoic acid; (S)-nicotine.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: vascular endothelial growth factor; vascular permeability factor; Vegf; VEGF-A; VEGF111; VEGF164; VPF
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,452,854 - 22,468,194 (+)NCBIGRCr8
mRatBN7.2914,955,300 - 14,970,641 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx923,540,015 - 23,555,341 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0928,602,643 - 28,617,969 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,903,445 - 26,918,771 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,340,341 - 17,355,681 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0916,232,415 - 16,247,658 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4910,520,730 - 10,536,071 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1910,519,065 - 10,531,506 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acoustic neuroma  (ISO)
acute chest syndrome  (ISO)
acute kidney failure  (ISO)
Acute Lung Injury  (IEP)
acute myeloid leukemia  (ISO)
adenocarcinoma  (ISO)
adhesions of uterus  (IEP)
adult-onset Still's disease  (ISO)
Alcoholic Liver Diseases  (ISO)
allergic contact dermatitis  (IEP,ISO)
Alzheimer's disease  (ISO)
amyotrophic lateral sclerosis  (ISO)
amyotrophic lateral sclerosis type 1  (ISS)
angiosarcoma  (ISO)
Arteriovenous Fistula  (IEP,ISO)
arteriovenous malformations of the brain  (ISO)
asthma  (ISO)
atherosclerosis  (ISO)
atrial fibrillation  (ISO)
attention deficit hyperactivity disorder  (IEP)
autoimmune hepatitis  (ISO)
Behcet's disease  (ISO)
blindness  (ISO)
brain edema  (IDA,IEP)
brain glioma  (ISO)
Brain Hypoxia-Ischemia  (ISO)
Brain Injuries  (IEP,ISO)
Brain Neoplasms  (ISO)
Breast Neoplasms  (ISO)
bullous pemphigoid  (ISO)
Cardiomegaly  (ISO)
cardiomyopathy  (ISO)
Cerebral Hemorrhage  (ISO)
cervix uteri carcinoma in situ  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
cholangiocarcinoma  (ISO)
cholesteatoma  (ISO)
cholesteatoma of middle ear  (ISO)
Choroidal Neovascularization  (IEP,ISO)
Chronic Bronchitis  (ISO)
chronic fatigue syndrome  (ISO)
Chronic Intermittent Hypoxia  (IEP)
chronic myeloid leukemia  (ISO)
chronic obstructive pulmonary disease  (IEP,ISO)
clear cell renal cell carcinoma  (ISO)
colon cancer  (IEP)
colon carcinoma  (ISO)
Colonic Neoplasms  (ISO)
colorectal cancer  (ISO)
congenital diaphragmatic hernia  (IEP)
congenital heart disease  (ISO)
congestive heart failure  (ISO)
contact dermatitis  (ISO)
corneal neovascularization  (ISO)
coronary artery disease  (ISO)
Coronary Disease  (ISO)
COVID-19  (ISO)
Crohn's disease  (ISO)
decubitus ulcer  (IEP,ISO)
dermatitis herpetiformis  (ISO)
Diabetes Complications  (ISO)
diabetic angiopathy  (IEP,ISO)
Diabetic Nephropathies  (ISO)
diabetic neuropathy  (ISO)
diabetic retinopathy  (IEP,ISO)
DiGeorge syndrome  (ISS)
disease of cellular proliferation  (ISO)
Drug-Related Side Effects and Adverse Reactions  (ISO)
ductal carcinoma in situ  (ISO)
duodenal ulcer  (IEP)
Endometrial Neoplasms  (ISO)
endometriosis  (IEP)
erythema multiforme  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Encephalomyelitis  (IDA,IEP,ISO)
Experimental Colitis  (ISO)
Experimental Diabetes Mellitus  (IDA,IEP,ISO)
Experimental Liver Cirrhosis  (ISO)
Experimental Mammary Neoplasms  (ISO)
Experimental Neoplasms  (ISO)
extrinsic allergic alveolitis  (ISO)
gastric ulcer  (ISO)
genetic disease  (ISO)
gingivitis  (ISO)
glaucoma  (IEP,IMP)
glioblastoma  (ISO)
gliosarcoma  (ISO)
glomerulonephritis  (ISO)
Glomus Tympanicum Tumor  (ISO)
graft-versus-host disease  (ISO)
granulosa cell tumor  (ISO)
Graves' disease  (ISO)
Head and Neck Neoplasms  (ISO)
heart disease  (ISO)
Hemorrhage  (ISO)
hepatocellular carcinoma  (IEP,ISO)
hepatopulmonary syndrome  (IEP)
Hypercholesterolemia  (ISO)
Hyperplasia  (ISO)
hypertension  (ISO)
impotence  (ISO)
Infantile Capillary Hemangioma  (ISO)
infantile Refsum disease  (ISO)
Inflammation  (ISO)
inflammatory bowel disease  (ISO)
intracranial aneurysm  (ISO)
Invasive Pulmonary Aspergillosis  (ISO)
inverted papilloma  (ISO)
ischemic colitis  (ISO)
Kawasaki disease  (ISO)
Kuhnt-Junius degeneration  (ISO)
larynx cancer  (ISO)
learning disability  (ISO)
limb ischemia  (IDA)
liver cirrhosis  (ISO)
Liver Failure  (ISO)
Liver Metastasis  (ISO)
Liver Reperfusion Injury  (IEP)
lung disease  (ISO)
lung non-small cell carcinoma  (ISO)
Lymphatic Metastasis  (ISO)
macular degeneration  (ISO)
macular retinal edema  (ISO)
melanoma  (ISO)
Memory Disorders  (ISO)
Metabolic Syndrome  (ISO)
middle cerebral artery infarction  (IEP,IMP)
multiple myeloma  (ISO)
myeloid leukemia  (ISO)
myocardial infarction  (IDA,ISO)
Myocardial Ischemia  (ISO)
Myocardial Reperfusion Injury  (ISO)
Nasal Polyps  (ISO)
nasopharynx carcinoma  (ISO)
Neoplasm Metastasis  (ISO)
Neoplasm Recurrence, Local  (ISO)
Neoplastic Cell Transformation  (ISO)
neovascular glaucoma  (ISO)
Neovascularization, Pathologic  (ISO)
Nerve Degeneration  (ISO)
neurofibromatosis 1  (ISO)
neurofibrosarcoma  (ISO)
newborn respiratory distress syndrome  (ISS)
opiate dependence  (ISO)
oral squamous cell carcinoma  (ISO)
osteochondrodysplasia  (ISO)
osteosarcoma  (ISO)
otitis media  (ISO)
Otitis Media with Effusion  (IEP)
ovarian hyperstimulation syndrome  (IMP)
Ovarian Neoplasms  (ISO)
Oxygen-Induced Retinopathy  (IEP,ISO)
pancreatic ductal carcinoma  (ISO)
Periodontal Atrophy  (IEP)
polyarteritis nodosa  (ISO)
polycystic ovary syndrome  (ISO)
Polypoidal Choroidal Vasculopathy  (ISO)
portal hypertension  (IEP,ISO)
pre-eclampsia  (ISO)
pre-malignant neoplasm  (ISO)
Pregnancy in Diabetics  (IEP)
primary biliary cholangitis  (IEP,ISO)
primary sclerosing cholangitis  (ISO)
proliferative diabetic retinopathy  (IDA)
prostate cancer  (ISO)
Prostatic Neoplasms  (ISO)
proteinuria  (ISO)
pseudoxanthoma elasticum  (ISO)
psoriasis  (ISO)
pterygium  (ISO)
pulmonary edema  (IDA)
pulmonary hypertension  (ISO)
renal cell carcinoma  (ISO)
renal Wilms' tumor  (ISO)
respiratory allergy  (ISO)
Retina Reperfusion Injury  (IDA)
retinal disease  (ISO)
retinal ischemia  (IEP)
Retinal Neovascularization  (IDA,IEP,ISO)
retinal telangiectasia  (ISO)
retinal vein occlusion  (IEP,ISO)
retinitis pigmentosa  (ISO)
retinopathy of prematurity  (ISO)
rhabdomyosarcoma  (ISO)
rheumatoid arthritis  (ISO)
rhinitis  (ISO)
Right Ventricular Hypertrophy  (IEP)
Seasonal Allergic Rhinitis  (ISO)
seminoma  (ISO)
Skin Neoplasms  (ISO)
Small-For-Size Syndrome  (IMP)
Spinal Cord Injuries  (IEP,ISO)
squamous cell carcinoma  (ISO)
status epilepticus  (ISO)
Stroke  (IEP)
sudden infant death syndrome  (ISO)
systemic scleroderma  (ISO)
temporal lobe epilepsy  (ISO)
Thrombotic Microangiopathies  (ISO)
Tongue Neoplasms  (ISO)
Tympanic Membrane Perforation  (IEP)
type 2 diabetes mellitus  (ISO)
ulcerative colitis  (ISO)
urinary bladder cancer  (ISO)
Urologic Neoplasms  (ISO)
Uterine Cervical Neoplasms  (ISO)
uveal melanoma  (ISO)
Ventricular Remodeling  (IEP)
vestibular schwannomatosis  (ISO)
Wounds and Injuries  (ISO)
Zellweger syndrome  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-Nornicotine  (ISO)
(+)-pilocarpine  (EXP)
(-)-anisomycin  (ISO)
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(-)-noscapine  (ISO)
(1->4)-beta-D-glucan  (ISO)
(25R)-cholest-5-ene-3beta,26-diol  (ISO)
(2E,4E)-hexa-2,4-dienoic acid  (ISO)
(E)-cinnamyl alcohol  (ISO)
(R)-lipoic acid  (EXP,ISO)
(R)-noradrenaline  (ISO)
(S)-naringenin  (ISO)
(S)-nicotine  (EXP,ISO)
(S)-ropivacaine  (ISO)
1'-acetoxychavicol acetate  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,10-phenanthroline  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1,3-benzothiazole-2-thiol  (ISO)
1,4-phenylenediamine  (ISO)
1-(5-isoquinolinesulfonyl)-2-methylpiperazine  (ISO)
1-[(2,3,4-trimethoxyphenyl)methyl]piperazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (EXP)
1-octadec-9-enoylglycero-3-phosphate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP,ISO)
1H-1,2,4-triazole  (EXP)
2,2'-bipyridine  (ISO)
2,2-bis(hydroxymethyl)-1-azabicyclo[2.2.2]octan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-Bis(3-hydroxybenzyl)butane-1,4-diol  (ISO)
2,4,6-trinitrobenzenesulfonic acid  (EXP,ISO)
2,4-D  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,6-di-tert-butyl-4-methylphenol  (ISO)
2-[cyclohexyl(oxo)methyl]-3,6,7,11b-tetrahydro-1H-pyrazino[2,1-a]isoquinolin-4-one  (ISO)
2-acetamidofluorene  (EXP)
2-amino-2-deoxy-D-galactopyranose  (EXP)
2-amino-2-deoxy-D-glucopyranose  (EXP,ISO)
2-chloroethanol  (ISO)
2-Hydroxy-6-(8,11,14-pentadecatrienyl)benzoic acid  (ISO)
2-hydroxyethyl methacrylate  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methoxy-17beta-estradiol  (EXP,ISO)
2-nitrofluorene  (EXP)
2-tert-butylhydroquinone  (ISO)
2-trans,6-trans,10-trans-geranylgeranyl diphosphate  (ISO)
26-hydroxycholesterol  (ISO)
3',5'-cyclic AMP  (ISO)
3',5'-cyclic GMP  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3,4-dihydroxybenzoic acid  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (EXP)
4-hydroperoxycyclophosphamide  (ISO)
4-hydroxy-17beta-estradiol  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-methylumbelliferyl acetate  (ISO)
4-phenylbutyric acid  (EXP)
4-tert-Octylphenol  (ISO)
4-vinylcyclohexene dioxide  (ISO)
5-(2-methylpiperazine-1-sulfonyl)isoquinoline  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-chloro-7-iodoquinolin-8-ol  (ISO)
5-fluorouracil  (ISO)
6-anilino-5,8-quinolinedione  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP,ISO)
7,8-diacetoxy-4-methylcoumarin  (ISO)
7,9-dihydro-1H-purine-2,6,8(3H)-trione  (ISO)
7-ketocholesterol  (ISO)
8-Br-cAMP  (ISO)
8-bromo-3',5'-cyclic GMP  (ISO)
9-cis-retinoic acid  (ISO)
AACOCF3  (ISO)
acetamide  (EXP)
acetic acid  (EXP)
acetylsalicylic acid  (EXP,ISO)
acrolein  (ISO)
acrylamide  (EXP,ISO)
actinomycin D  (EXP,ISO)
adenosine  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin G1  (ISO)
AICA ribonucleotide  (ISO)
albendazole  (ISO)
alclometasone dipropionate  (ISO)
aldehydo-D-glucosamine  (EXP,ISO)
aldehydo-D-glucose  (EXP,ISO)
alexidine  (ISO)
all-trans-retinoic acid  (EXP,ISO)
allantoin  (EXP,ISO)
alliin  (ISO)
alpha-hexylcinnamaldehyde  (ISO)
alpha-naphthoflavone  (EXP,ISO)
alpha-pinene  (ISO)
aluminium atom  (ISO)
aluminium oxide  (ISO)
aluminium(0)  (ISO)
alvocidib  (ISO)
AM-251  (ISO)
amiloride  (ISO)
amino acid  (ISO)
amiodarone  (ISO)
amitriptyline  (ISO)
amitrole  (ISO)
ammonium chloride  (EXP)
amphetamine  (EXP)
ampicillin  (EXP)
anandamide  (ISO)
androgen antagonist  (EXP)
andrographolide  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
anthracene-1,8,9-triol  (ISO)
antimycin A  (ISO)
ANTU  (EXP)
apigenin  (ISO)
arachidonic acid  (ISO)
arachidonyl-2'-chloroethylamide  (ISO)
aripiprazole  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenic trichloride  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
artesunate  (EXP)
asbestos  (ISO)
aspartame  (ISO)
atrazine  (ISO)
auraptene  (ISO)
Auriculasin  (ISO)
avobenzone  (ISO)
axitinib  (ISO)
Azaspiracid  (ISO)
azoxystrobin  (EXP,ISO)
bacitracin  (EXP)
baicalein  (ISO)
Bardoxolone methyl  (ISO)
beclomethasone  (ISO)
benazepril  (EXP)
benzene  (ISO)
benzethonium chloride  (ISO)
benzo[a]pyrene  (ISO)
benzoic acid  (ISO)
berberine  (ISO)
beta-D-glucosamine  (EXP,ISO)
betamethasone  (ISO)
bexarotene  (EXP)
biphenyl-2-ol  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisdemethoxycurcumin  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol A diglycidyl ether  (ISO)
bleomycin A2  (EXP)
borrelidin  (ISO)
bortezomib  (ISO)
BQ 123  (ISO)
brefeldin A  (ISO)
bromocriptine  (EXP)
bucladesine  (ISO)
budesonide  (ISO)
bufalin  (ISO)
butan-1-ol  (ISO)
butanal  (ISO)
butein  (ISO)
butylated hydroxyanisole  (ISO)
Butylbenzyl phthalate  (ISO)
Butylparaben  (EXP)
butyric acid  (EXP)
C60 fullerene  (EXP)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
caesium chloride  (ISO)
caffeine  (ISO)
Calcimycin  (ISO)
Calcitonin gene-related peptide 1  (EXP)
calcitriol  (EXP,ISO)
calcium atom  (EXP,ISO)
calcium dichloride  (ISO)
calcium silicate  (ISO)
calcium(0)  (EXP,ISO)
camptothecin  (ISO)
candesartan  (ISO)
canertinib  (ISO)
cannabidiol  (ISO)
capecitabine  (ISO)
capsaicin  (EXP,ISO)
captopril  (ISO)
carbamazepine  (ISO)
carbon disulfide  (ISO)
carbon nanotube  (ISO)
carnosine  (EXP)
carvone  (ISO)
casticin  (ISO)
catechol  (ISO)
celecoxib  (EXP,ISO)
cephaeline  (ISO)
cetrorelix  (ISO)
CGP 12177  (ISO)
CGS-21680  (EXP,ISO)
chalcones  (ISO)
Chebulagic acid  (EXP)
chetomin  (ISO)
chitin  (ISO)
chloroethene  (ISO)
chloromethylisothiazolinone  (ISO)
chlorpromazine  (ISO)
chlorpyrifos  (EXP,ISO)
cholesterol  (EXP)
cholic acid  (ISO)
choline  (ISO)
chondroitin sulfate  (ISO)
chromium(6+)  (ISO)
chrysin  (EXP,ISO)
ciglitazone  (ISO)
cinnamyl alcohol  (ISO)
cis-caffeic acid  (ISO)
cisplatin  (ISO)
citral  (ISO)
citric acid  (ISO)
clofibrate  (ISO)
cloricromen  (EXP)
clotrimazole  (ISO)
cobalt atom  (EXP,ISO)
cobalt dichloride  (EXP,ISO)
cobalt(2+) sulfate  (ISO)
cocaine  (EXP)
colforsin daropate hydrochloride  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cordycepin  (ISO)
corosolic acid  (ISO)
corticosterone  (EXP,ISO)
cortisol  (ISO)
coumarin  (ISO)
coumarin 460  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
CU-O LINKAGE  (ISO)
cucurbitacin I  (ISO)
curcumin  (EXP,ISO)
Curcumol  (EXP,ISO)
cyanidin cation  (ISO)
cycloheximide  (EXP,ISO)
cyclophosphamide  (EXP,ISO)
cyclosporin A  (EXP,ISO)
cyfluthrin  (EXP)
D-glucose  (EXP,ISO)
dacarbazine  (ISO)
daidzein 7-O-beta-D-glucoside  (ISO)
DAPT  (ISO)
daunorubicin  (EXP,ISO)
DDT  (ISO)
deguelin  (ISO)
delphinidin  (ISO)
demethoxycurcumin  (ISO)
dequalinium  (ISO)
dermatan sulfate  (ISO)
desferrioxamine B  (EXP,ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
diazepam  (ISO)
diazinon  (EXP)
dibenziodolium  (ISO)
dibutyl phthalate  (EXP,ISO)
diclofenac  (ISO)
dieldrin  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP)
digitoxigenin  (ISO)
digoxigenin  (ISO)
digoxin  (ISO)
Dihydrotanshinone I  (ISO)
diisononyl phthalate  (ISO)
dimethyl-(phenylmethyl)-[2-[2-[4-(2,4,4-trimethylpentan-2-yl)phenoxy]ethoxy]ethyl]ammonium  (ISO)
dimethylarsinic acid  (EXP,ISO)
dinophysistoxin 1  (ISO)
dioscin  (ISO)
diosgenin  (ISO)
dioxygen  (EXP,ISO)
dipyridamole  (ISO)
disodium selenite  (ISO)
divanadium pentaoxide  (ISO)
dobutamine  (ISO)
dopamine  (EXP)
dorsomorphin  (ISO)
doxazosin  (ISO)
doxorubicin  (EXP,ISO)
DuP 697  (ISO)
edaravone  (ISO)
ellagic acid  (EXP)
embelin  (ISO)
emetine  (ISO)
emodin  (ISO)
enalapril  (EXP,ISO)
endosulfan  (EXP,ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzacamene  (EXP)
eriodictyol  (ISO)
erythrosin B  (ISO)
estriol  (EXP)
estrogen  (EXP)
ethanol  (EXP,ISO)
ethionamide  (EXP)
ethylenediaminetetraacetic acid  (ISO)
ethylisopropylamiloride  (ISO)
eticlopride(1+)  (EXP)
etoposide  (ISO)
fasudil  (ISO)
febuxostat  (EXP)
fenbendazole  (ISO)
fenofibrate  (ISO)
fenpyroximate  (ISO)
fenvalerate  (ISO)
ferulic acid  (ISO)
fingolimod hydrochloride  (ISO)
fisetin  (ISO)
flavanones  (ISO)
fludrocortisone  (ISO)
fluoranthene  (ISO)
fluorometholone  (ISO)
fluoxetine  (EXP,ISO)
folic acid  (ISO)
folpet  (ISO)
formaldehyde  (ISO)
formic acid  (ISO)
fosinopril  (ISO)
fructose  (EXP)
fulvestrant  (ISO)
fumonisin B1  (ISO)
furan  (EXP)
furosemide  (EXP)
gadodiamide hydrate  (EXP,ISO)
gadolinium trichloride  (ISO)
galangin  (ISO)
galaxolide  (ISO)
gallic acid  (ISO)
gamma-hexachlorocyclohexane  (ISO)
Garcinol  (ISO)
gefitinib  (EXP,ISO)
gemcitabine  (ISO)
Genipin  (ISO)
genistein  (EXP,ISO)
gentamycin  (EXP)
geranial  (ISO)
geraniol  (EXP)
glucose  (EXP,ISO)
glutathione  (ISO)
glycidol  (EXP)
glycyrrhetinate  (ISO)
glycyrrhetinic acid  (ISO)
glyphosate  (EXP,ISO)
Goe 6976  (ISO)
gossypol  (ISO)
guggulsterone  (ISO)
GW 1929  (ISO)
harmaline  (ISO)
heparan sulfate  (ISO)
heparin  (ISO)
herbimycin  (ISO)
hesperidin  (EXP)
HET0016  (ISO)
hexachlorobenzene  (ISO)
hexaconazole  (ISO)
homocysteine  (EXP,ISO)
Honokiol  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (ISO)
hydroxytyrosol  (EXP)
ibuprofen  (EXP,ISO)
icariside II  (ISO)
ICI 118551  (ISO)
idelalisib  (ISO)
ifosfamide  (ISO)
imidacloprid  (EXP)
imidurea  (ISO)
indole-3-methanol  (ISO)
indometacin  (EXP,ISO)
iodixanol  (ISO)
isobutyl nitrite  (ISO)
isoprenaline  (EXP,ISO)
isotretinoin  (ISO)
juglone  (ISO)
kaempferide  (ISO)
kaempferol  (EXP,ISO)
kainic acid  (ISO)
ketoconazole  (EXP,ISO)
L-ascorbic acid  (ISO)
L-methionine  (ISO)
lanatoside C  (ISO)
lapatinib  (ISO)
lead diacetate  (EXP)
lead(0)  (ISO)
leflunomide  (EXP,ISO)
letrozole  (ISO)
leuprolide  (EXP)
levonorgestrel  (ISO)
linoleic acid  (EXP)
lipoic acid  (EXP,ISO)
lipopolysaccharide  (EXP,ISO)
lisinopril dihydrate  (EXP)
lithium atom  (EXP,ISO)
lithium chloride  (ISO)
lithium hydride  (EXP,ISO)
lithocholic acid  (ISO)
loliolide  (ISO)
losartan  (EXP,ISO)
luteolin  (ISO)
LY294002  (EXP,ISO)
lycopene  (EXP)
lycorine  (ISO)
Magnolol  (ISO)
maneb  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (EXP,ISO)
mangiferin  (ISO)
manumycin A  (EXP)
maslinic acid  (ISO)
masoprocol  (ISO)
mebendazole  (ISO)
meclocycline  (ISO)
medroxyprogesterone acetate  (ISO)
melatonin  (EXP,ISO)
melittin  (ISO)
mercury dibromide  (ISO)
mesalamine  (EXP)
metformin  (ISO)
methamphetamine  (EXP)
methapyrilene  (EXP)
methidathion  (ISO)
methionine sulfoximine  (ISO)
methotrexate  (EXP,ISO)
methoxychlor  (EXP)
methyl caffeate  (ISO)
methylarsonic acid  (ISO)
Methylbenzethonium chloride  (ISO)
methylglyoxal  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (EXP,ISO)
metoprolol  (ISO)
metyrapone  (EXP)
mevalonic acid  (ISO)
Mezerein  (ISO)
mibolerone  (ISO)
microcystin-LR  (EXP,ISO)
mifepristone  (EXP,ISO)
minocycline  (ISO)
MK-2206  (EXP,ISO)
mono(2-ethylhexyl) phthalate  (ISO)
monocrotaline  (EXP,ISO)
monosodium L-glutamate  (EXP)
morin  (EXP)
morphine  (ISO)
Morroniside  (EXP)
motexafin gadolinium  (ISO)
myricetin  (EXP,ISO)
N(4)-hydroxycytidine  (ISO)
N(6)-butyryl-cAMP  (EXP)
N(omega)-methyl-L-arginine  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-acetylsphingosine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP,ISO)
N-butyl-N-(4-hydroxybutyl)nitrosamine  (EXP)
N-ethyl-5'-carboxamidoadenosine  (ISO)
N-formyl-L-methionyl-L-leucyl-L-phenylalanine  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methyl-N-nitrosourea  (EXP,ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (EXP)
N-nitrosomorpholine  (EXP)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (EXP)
naproxen  (EXP)
Neferine  (EXP)
neocuproine  (ISO)
nevirapine  (ISO)
nickel atom  (EXP,ISO)
nickel dichloride  (EXP,ISO)
nickel sulfate  (ISO)
niclosamide  (ISO)
nicotine  (EXP,ISO)
nicotinic acid  (EXP,ISO)
nifedipine  (ISO)
nimesulide  (ISO)
nitric oxide  (EXP)
nitrofen  (EXP)
nitroprusside  (ISO)
nocodazole  (ISO)
Nonidet P-40  (ISO)
Nonylphenol  (ISO)
NORCANTHARIDIN  (ISO)
norethisterone  (ISO)
norwogonin  (EXP)
NS-398  (ISO)
ochratoxin A  (ISO)
octreotide  (ISO)
okadaic acid  (ISO)
organoselenium compound  (ISO)
oxaliplatin  (ISO)
oxilofrine  (ISO)
oxytetracycline  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
p-menthan-3-ol  (ISO)
p-tert-Amylphenol  (ISO)
paclitaxel  (ISO)
palmatine  (ISO)
palytoxin  (ISO)
paracetamol  (EXP,ISO)
paraoxon  (ISO)
paraquat  (EXP,ISO)
parathion  (EXP)
paroxetine  (ISO)
parthenolide  (ISO)
patulin  (EXP)
PD123319  (EXP)
PD173074  (ISO)
pentetrazol  (ISO)
Pentoxifylline  (EXP)
perfluorodecanoic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
perfluoroundecanoic acid  (ISO)
perindopril  (ISO)
phenethyl caffeate  (ISO)
phenobarbital  (EXP,ISO)
phenols  (ISO)
phenylephrine  (EXP)
phenylhydrazine  (EXP)
phloretin  (ISO)
phlorizin  (ISO)
phorbol 13-acetate 12-myristate  (EXP,ISO)
phosgene  (EXP,ISO)
Phytolaccoside E  (ISO)
pinostrobin  (ISO)
pioglitazone  (EXP,ISO)
piperonyl butoxide  (EXP)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
plerixafor  (ISO)
plumbagin  (ISO)
poly(vinylpyrrolidone)  (ISO)
polymyxin B2  (ISO)
ponatinib  (ISO)
Ponicidin  (ISO)
potassium bromate  (EXP)
potassium chromate  (ISO)
potassium dichromate  (ISO)
potassium nitrate  (ISO)
prednisolone  (ISO)
prednisone  (EXP)
procyanidin B2  (EXP)
progesterone  (EXP,ISO)
propidium  (ISO)
propionic acid  (ISO)
propranolol  (ISO)
Proscillaridin  (ISO)
prostaglandin E2  (ISO)
prostaglandin F2alpha  (EXP)
protein kinase inhibitor  (ISO)
puerarin  (EXP)
puromycin  (ISO)
pyrvinium  (ISO)
quartz  (EXP,ISO)
quercetin  (EXP,ISO)
quinolone  (ISO)
quinomethionate  (ISO)
Quinomycin A  (ISO)
rac-lactic acid  (ISO)
raloxifene  (EXP,ISO)
ranitidine  (EXP)
reactive oxygen species  (ISO)
Rebamipide  (EXP)
regorafenib  (ISO)
resveratrol  (EXP,ISO)
Rhein  (ISO)
ribavirin  (ISO)
rifampicin  (EXP)
Riluzole  (ISO)
rimonabant  (ISO)
Ro 31-8220  (EXP)
romidepsin  (ISO)
rotenone  (ISO)
rottlerin  (ISO)
roxarsone  (EXP)
royal jelly  (EXP,ISO)
ruthenium atom  (ISO)
ruthenium red  (ISO)
rutin  (EXP,ISO)
ruxolitinib  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
S-nitroso-N-acetyl-D-penicillamine  (EXP)
saccharin  (ISO)
salsalate  (EXP)
salubrinal  (EXP)
SB 203580  (EXP,ISO)
SB 431542  (ISO)
SCH 23390  (EXP)
scutellarin  (EXP,ISO)
shikimic acid  (ISO)
sildenafil citrate  (EXP)
silibinin  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
simazine  (ISO)
simvastatin  (EXP,ISO)
sirolimus  (EXP,ISO)
sirtinol  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium dodecyl sulfate  (ISO)
sodium nitrite  (EXP)
sorafenib  (ISO)
sorbinil  (ISO)
spironolactone  (EXP)
squalene  (EXP,ISO)
SR 144528  (ISO)
staurosporine  (ISO)
streptozocin  (EXP,ISO)
succimer  (ISO)
sulfadimethoxine  (EXP,ISO)
sulforaphane  (ISO)
sumatriptan  (EXP)
sunitinib  (ISO)
T-2 toxin  (ISO)
tacrolimus hydrate  (EXP)
tadalafil  (EXP)
tamibarotene  (ISO)
tamoxifen  (ISO)
Tanshinone I  (ISO)
taurine  (EXP)
tauroursodeoxycholic acid  (ISO)
tebufenpyrad  (ISO)
telmisartan  (EXP,ISO)
temozolomide  (EXP)
Temsirolimus  (ISO)
Terpestacin  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
Tetrachlorobisphenol A  (ISO)
tetrachloromethane  (EXP,ISO)
tetraethylenepentamine  (ISO)
tetramethylpyrazine  (ISO)
tetrathiomolybdate(2-)  (EXP,ISO)
thalidomide  (EXP,ISO)
thapsigargin  (EXP,ISO)
thiabendazole  (EXP)
thifluzamide  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP,ISO)
thymol  (ISO)
thymol sulfate(1-)  (ISO)
thymoquinone  (ISO)
thyroxine  (EXP)
ticlopidine  (ISO)
tin(II) chloride (anhydrous)  (ISO)
titanium dioxide  (ISO)
tofacitinib  (ISO)
toluene 2,4-diisocyanate  (ISO)
topotecan  (ISO)
trans-caffeic acid  (ISO)
tremolite asbestos  (ISO)
triamcinolone  (ISO)
triamcinolone acetonide  (ISO)
Tributyltin oxide  (EXP)
trichloroethene  (EXP)
triclosan  (ISO)
trimellitic anhydride  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (EXP,ISO)
tyloxapol  (ISO)
tyrphostin AG 1478  (ISO)
urethane  (ISO)
ursolic acid  (ISO)
vadimezan  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)
valsartan  (EXP,ISO)
vancomycin  (ISO)
Verbenalin  (ISO)
vincaleukoblastine  (EXP)
vinclozolin  (EXP)
vincristine  (EXP)
vitamin D  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
VX nerve agent  (EXP)
VX-745  (ISO)
warfarin  (ISO)
WIN 55212-2  (ISO)
withaferin A  (ISO)
wortmannin  (EXP,ISO)
zearalenone  (ISO)
zerumbone  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc dichloride  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IMP,ISO,TAS)
angiogenesis involved in coronary vascular morphogenesis  (IMP)
apoptotic process  (ISO)
artery morphogenesis  (ISO)
basophil chemotaxis  (ISO)
blood vessel development  (ISO)
blood vessel morphogenesis  (ISO)
blood vessel remodeling  (IMP)
bone trabecula formation  (ISO)
bone trabecula morphogenesis  (ISO)
branching involved in blood vessel morphogenesis  (IEA,ISO)
branching morphogenesis of an epithelial tube  (ISO)
camera-type eye morphogenesis  (ISO)
cardiac muscle cell development  (ISO)
cardiac vascular smooth muscle cell development  (ISO)
cell chemotaxis  (IMP)
cell differentiation  (IEA)
cell migration  (ISO)
cell migration involved in sprouting angiogenesis  (IEA,ISO)
cell population proliferation  (ISO)
cell-cell adhesion  (ISO)
cellular response to dexamethasone stimulus  (IEP)
cellular response to estrogen stimulus  (IEP)
cellular response to fibroblast growth factor stimulus  (IEP)
cellular response to hypoxia  (IEA,ISO)
cellular response to mechanical stimulus  (IEP)
cellular response to vascular endothelial growth factor stimulus  (ISO)
cellular response to wortmannin  (IEP)
cellular response to xenobiotic stimulus  (IEP)
cellular stress response to acid chemical  (IEA,ISO)
commissural neuron axon guidance  (ISO)
coronary artery morphogenesis  (ISO)
coronary vein morphogenesis  (ISO)
dopaminergic neuron differentiation  (ISO)
endothelial cell chemotaxis  (IEA,ISO)
endothelial cell migration  (ISO)
endothelial cell proliferation  (ISO)
epithelial cell differentiation  (ISO)
epithelial cell maturation  (ISO)
epithelial cell proliferation  (ISO)
eye photoreceptor cell development  (ISO)
female pregnancy  (IEP)
heart morphogenesis  (ISO)
homeostasis of number of cells within a tissue  (ISO)
in utero embryonic development  (ISO)
induction of positive chemotaxis  (IBA,IEA,ISO)
kidney development  (ISO)
lactation  (ISO)
lung alveolus development  (IMP)
lung development  (ISO)
lung vasculature development  (ISO)
lymph vessel morphogenesis  (ISO)
lymphangiogenesis  (ISO)
macrophage differentiation  (IEA,ISO)
mammary gland alveolus development  (ISO)
mesenchymal cell proliferation  (ISO)
mesoderm development  (ISO)
monocyte differentiation  (IEA,ISO)
motor neuron migration  (ISO,ISS)
mRNA stabilization  (IDA)
negative regulation of adherens junction organization  (IEA,ISO)
negative regulation of apoptotic process  (IEA,ISO)
negative regulation of blood-brain barrier permeability  (IEA,ISO)
negative regulation of bone resorption  (IMP)
negative regulation of cell-cell adhesion  (ISO)
negative regulation of cell-cell adhesion mediated by cadherin  (IEA,ISO)
negative regulation of epithelial to mesenchymal transition  (ISO)
negative regulation of establishment of endothelial barrier  (IEA,ISO)
negative regulation of extrinsic apoptotic signaling pathway  (ISO)
negative regulation of fat cell differentiation  (ISO)
negative regulation of gene expression  (IEA,ISO)
negative regulation of neuron apoptotic process  (ISO)
negative regulation of programmed cell death  (IMP)
negative regulation of transcription by RNA polymerase II  (IEA,ISO)
nervous system development  (IDA,NAS)
neuroblast proliferation  (ISO)
neuron apoptotic process  (IMP)
neuron development  (ISO)
outflow tract morphogenesis  (ISO)
ovarian follicle development  (ISO)
positive chemotaxis  (IEA,ISO)
positive regulation of angiogenesis  (IBA,IDA,IEA,ISO,ISS)
positive regulation of axon extension involved in axon guidance  (ISO)
positive regulation of blood vessel endothelial cell migration  (ISO)
positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis  (IEA,ISO)
positive regulation of branching involved in ureteric bud morphogenesis  (ISO)
positive regulation of cell adhesion  (ISO)
positive regulation of cell division  (IEA)
positive regulation of cell migration  (ISO)
positive regulation of cell migration involved in sprouting angiogenesis  (IEA,ISO)
positive regulation of cell population proliferation  (IMP,ISO,TAS)
positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway  (IEA,ISO)
positive regulation of cold-induced thermogenesis  (ISO,ISS)
positive regulation of DNA biosynthetic process  (ISO)
positive regulation of endothelial cell chemotaxis  (ISO)
positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway  (IEA,ISO)
positive regulation of endothelial cell migration  (ISO,ISS)
positive regulation of endothelial cell proliferation  (IBA,IEA,ISO,ISS)
positive regulation of epithelial cell proliferation  (ISO)
positive regulation of epithelial tube formation  (ISO)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of focal adhesion assembly  (IEA,ISO,ISS)
positive regulation of gene expression  (IEA,ISO)
positive regulation of lymphangiogenesis  (ISO)
positive regulation of MAPK cascade  (ISO)
positive regulation of mast cell chemotaxis  (IBA,IEA,ISO)
positive regulation of mesenchymal cell proliferation  (ISO)
positive regulation of neuroblast proliferation  (ISO)
positive regulation of osteoblast differentiation  (ISO)
positive regulation of p38MAPK cascade  (IEA,ISO)
positive regulation of peptidyl-serine phosphorylation  (IEA)
positive regulation of peptidyl-tyrosine autophosphorylation  (IEA)
positive regulation of peptidyl-tyrosine phosphorylation  (ISO,ISS)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (ISO)
positive regulation of positive chemotaxis  (ISO)
positive regulation of protein autophosphorylation  (ISO)
positive regulation of protein kinase C signaling  (IEA,ISO)
positive regulation of protein localization to early endosome  (ISO)
positive regulation of protein phosphorylation  (IBA,IEA,ISO,ISS)
positive regulation of protein-containing complex assembly  (IEA,ISO,ISS)
positive regulation of receptor internalization  (IEA,ISO)
positive regulation of receptor signaling pathway via STAT  (ISO)
positive regulation of signal transduction  (IDA)
positive regulation of smooth muscle cell proliferation  (IMP)
positive regulation of sprouting angiogenesis  (IEA,ISO)
positive regulation of stem cell proliferation  (ISO)
positive regulation of transcription by RNA polymerase II  (IDA,IEA,ISO)
positive regulation of trophoblast cell migration  (IEA,ISO)
positive regulation of vascular endothelial growth factor signaling pathway  (IEA,ISO)
positive regulation of vascular permeability  (IEA,IMP,ISO)
post-embryonic camera-type eye development  (ISO)
primitive erythrocyte differentiation  (ISO)
regulation of cell shape  (IEA,ISO)
regulation of endothelial cell differentiation  (ISO)
regulation of growth  (ISO)
regulation of hematopoietic progenitor cell differentiation  (ISO)
regulation of nitric oxide mediated signal transduction  (IEA,ISO)
regulation of transcription by RNA polymerase II  (ISO)
response to dexamethasone  (IEP)
response to estradiol  (IEP)
response to folic acid  (IEP)
response to hypoxia  (IBA,IDA,IEA,ISO)
response to oxygen levels  (IEP)
response to progesterone  (IEP)
response to vitamin A  (IEP)
retinal ganglion cell axon guidance  (ISO)
sprouting angiogenesis  (IBA,IEA,ISO)
stem cell proliferation  (ISO)
surfactant homeostasis  (ISO)
T-helper 1 type immune response  (IDA)
tissue remodeling  (IEP)
tube formation  (IEA,ISO,ISS)
vascular endothelial growth factor receptor signaling pathway  (IBA,IEA,IMP,ISO)
vascular endothelial growth factor receptor-2 signaling pathway  (IEA,ISO)
vascular endothelial growth factor signaling pathway  (IBA,IEA,ISO)
vascular wound healing  (IEA,ISO)
vasculature development  (ISO)
vasodilation  (ISO)
VEGF-activated neuropilin signaling pathway  (ISO)

Cellular Component
adherens junction  (IEA,ISO)
basement membrane  (IDA)
cell surface  (IEA,ISO)
cytoplasm  (ISO)
extracellular region  (ISO)
extracellular space  (IBA,IDA,IEA,ISO)
membrane  (IEA)
nucleus  (ISO)
secretory granule  (IEA,ISO)
VEGF-A complex  (IEA,ISO)
vesicle  (IDA)

References

References - curated
# Reference Title Reference Citation
1. Vascular endothelial growth factor and insulin-like growth factor-1 in polycystic ovary syndrome and their relation to ovarian blood flow. Abd El Aal DE, etal., Eur J Obstet Gynecol Reprod Biol. 2005 Feb 1;118(2):219-24.
2. Variants in the VEGFA gene and treatment outcome after anti-VEGF treatment for neovascular age-related macular degeneration. Abedi F, etal., Ophthalmology. 2013 Jan;120(1):115-21. doi: 10.1016/j.ophtha.2012.10.006. Epub 2012 Nov 11.
3. The relation of vascular endothelial growth factor (VEGF) gene polymorphisms on VEGF levels and the risk of vasoocclusive crisis in sickle cell disease. Al-Habboubi HH, etal., Eur J Haematol. 2012 Nov;89(5):403-9. doi: 10.1111/ejh.12003. Epub 2012 Aug 30.
4. Multiple variants in vascular endothelial growth factor (VEGFA) are risk factors for time to severe retinopathy in type 1 diabetes: the DCCT/EDIC genetics study. Al-Kateb H, etal., Diabetes. 2007 Aug;56(8):2161-8. Epub 2007 May 18.
5. Relationship between levels of angiogenic and lymphangiogenic factors and the endoscopic, histological and clinical activity, and acute-phase reactants in patients with inflammatory bowel disease. Algaba A, etal., J Crohns Colitis. 2013 Dec;7(11):e569-79. doi: 10.1016/j.crohns.2013.04.005. Epub 2013 May 1.
6. Dual targeting of Bcl-2 and VEGF: A potential strategy to improve therapy for prostate cancer. Anai S, etal., Urol Oncol. 2009 Jul 2.
7. Inhibition of angiogenesis by blocking activation of the vascular endothelial growth factor receptor 2 leads to decreased growth of neurogenic sarcomas. Angelov L, etal., Cancer Res. 1999 Nov 1;59(21):5536-41.
8. A Switch in the Dynamics of Intra-Platelet VEGF-A from Cancer to the Later Phase of Liver Regeneration after Partial Hepatectomy in Humans. Aryal B, etal., PLoS One. 2016 Mar 1;11(3):e0150446. doi: 10.1371/journal.pone.0150446. eCollection 2016.
9. Cold-induced mRNA expression of angiogenic factors in rat brown adipose tissue. Asano A, etal., J Vet Med Sci. 1999 Apr;61(4):403-9.
10. Post-infarct treatment with [Pyr(1)]apelin-13 improves myocardial function by increasing neovascularization and overexpression of angiogenic growth factors in rats. Azizi Y, etal., Eur J Pharmacol. 2015 Aug 15;761:101-8. doi: 10.1016/j.ejphar.2015.04.034. Epub 2015 May 1.
11. Esophageal ulceration triggers expression of hypoxia-inducible factor-1 alpha and activates vascular endothelial growth factor gene: implications for angiogenesis and ulcer healing. Baatar D, etal., Am J Pathol 2002 Oct;161(4):1449-57.
12. Genetic polymorphisms of vascular endothelial growth factor in severe pre-eclampsia. Banyasz I, etal., Mol Hum Reprod. 2006 Apr;12(4):233-6. Epub 2006 Mar 3.
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PMID:18354258   PMID:18374641   PMID:18386220   PMID:18390208   PMID:18395608   PMID:18407748   PMID:18408130   PMID:18434360   PMID:18440775   PMID:18454179   PMID:18468635   PMID:18495151  
PMID:18497305   PMID:18503889   PMID:18533784   PMID:18559975   PMID:18562929   PMID:18577655   PMID:18593636   PMID:18632792   PMID:18644387   PMID:18645720   PMID:18655767   PMID:18689794  
PMID:18708733   PMID:18753609   PMID:18772315   PMID:18772338   PMID:18798867   PMID:18803284   PMID:18818569   PMID:18834982   PMID:18937073   PMID:18957989   PMID:18973754   PMID:19005920  
PMID:19032372   PMID:19033661   PMID:19042927   PMID:19059263   PMID:19060224   PMID:19087268   PMID:19130402   PMID:19148554   PMID:19150651   PMID:19185395   PMID:19203849   PMID:19212638  
PMID:19233265   PMID:19275959   PMID:19285541   PMID:19328472   PMID:19357264   PMID:19383236   PMID:19390056   PMID:19397783   PMID:19407245   PMID:19435557   PMID:19473555   PMID:19513111  
PMID:19575935   PMID:19626991   PMID:19652095   PMID:19674970   PMID:19695348   PMID:19696011   PMID:19705456   PMID:19728613   PMID:19733244   PMID:19734584   PMID:19816949   PMID:19915910  
PMID:19932587   PMID:19948826   PMID:20001687   PMID:20039857   PMID:20045921   PMID:20048167   PMID:20093283   PMID:20107068   PMID:20107925   PMID:20116868   PMID:20133819   PMID:20139114  
PMID:20193739   PMID:20197608   PMID:20199645   PMID:20335103   PMID:20362592   PMID:20368092   PMID:20417686   PMID:20432372   PMID:20453526   PMID:20457593   PMID:20497126   PMID:20551324  
PMID:20562294   PMID:20572782   PMID:20586869   PMID:20599605   PMID:20599775   PMID:20605140   PMID:20619315   PMID:20629321   PMID:20660291   PMID:20696782   PMID:20697002   PMID:20698758  
PMID:20705122   PMID:20730910   PMID:20731041   PMID:20736792   PMID:20797711   PMID:20823573   PMID:20860549   PMID:20921951   PMID:20962116   PMID:20972576   PMID:21054999   PMID:21092652  
PMID:21115498   PMID:21149635   PMID:21162206   PMID:21171350   PMID:21180137   PMID:21186584   PMID:21192293   PMID:21192306   PMID:21211317   PMID:21211366   PMID:21243740   PMID:21245381  
PMID:21263376   PMID:21269989   PMID:21311201   PMID:21343256   PMID:21378373   PMID:21385309   PMID:21388619   PMID:21458034   PMID:21505729   PMID:21530097   PMID:21613481   PMID:21640078  
PMID:21643626   PMID:21658587   PMID:21732485   PMID:21747167   PMID:21750722   PMID:21771332   PMID:21789886   PMID:21801303   PMID:21818951   PMID:21828096   PMID:21863308   PMID:21911594  
PMID:22009797   PMID:22094487   PMID:22129892   PMID:22136717   PMID:22170591   PMID:22174951   PMID:22191573   PMID:22229198   PMID:22245234   PMID:22332532   PMID:22336210   PMID:22379341  
PMID:22382381   PMID:22426001   PMID:22445886   PMID:22455130   PMID:22499584   PMID:22507670   PMID:22519405   PMID:22562302   PMID:22568219   PMID:22577112   PMID:22579701   PMID:22615070  
PMID:22645419   PMID:22658411   PMID:22696064   PMID:22707412   PMID:22773844   PMID:22796763   PMID:22797318   PMID:22814749   PMID:22824331   PMID:22884805   PMID:22886301   PMID:22897854  
PMID:22906018   PMID:22922737   PMID:22927341   PMID:22932749   PMID:22944728   PMID:22949406   PMID:23015338   PMID:23069939   PMID:23073804   PMID:23083510   PMID:23089551   PMID:23171679  
PMID:23268393   PMID:23269647   PMID:23279742   PMID:23337128   PMID:23356989   PMID:23378030   PMID:23379999   PMID:23441597   PMID:23444112   PMID:23456363   PMID:23483612   PMID:23565129  
PMID:23608382   PMID:23624342   PMID:23639442   PMID:23639879   PMID:23688497   PMID:23693073   PMID:23707263   PMID:23788612   PMID:23838428   PMID:23863481   PMID:23888777   PMID:23901221  
PMID:23936150   PMID:23951316   PMID:23972394   PMID:24006456   PMID:24022223   PMID:24076411   PMID:24097299   PMID:24115032   PMID:24219243   PMID:24228092   PMID:24306516   PMID:24329544  
PMID:24351506   PMID:24356884   PMID:24367707   PMID:24390792   PMID:24401374   PMID:24403062   PMID:24464023   PMID:24472554   PMID:24491567   PMID:24507647   PMID:24559584   PMID:24630601  
PMID:24669883   PMID:24696420   PMID:24709590   PMID:24771956   PMID:24822184   PMID:24844779   PMID:24846143   PMID:24863063   PMID:24865514   PMID:24865854   PMID:24867508   PMID:24893038  
PMID:24949972   PMID:25010983   PMID:25031729   PMID:25099287   PMID:25107896   PMID:25110093   PMID:25132001   PMID:25151644   PMID:25159845   PMID:25174606   PMID:25175707   PMID:25176344  
PMID:25179820   PMID:25184477   PMID:25195697   PMID:25201493   PMID:25203492   PMID:25217874   PMID:25251394   PMID:25268360   PMID:25279427   PMID:25324681   PMID:25337213   PMID:25401104  
PMID:25466960   PMID:25503465   PMID:25511996   PMID:25529509   PMID:25535647   PMID:25559382   PMID:25592135   PMID:25655083   PMID:25673207   PMID:25730004   PMID:25759532   PMID:25789687  
PMID:25920966   PMID:25958163   PMID:25975603   PMID:26092525   PMID:26099282   PMID:26116774   PMID:26125742   PMID:26248134   PMID:26262503   PMID:26268439   PMID:26271978   PMID:26299712  
PMID:26323652   PMID:26390417   PMID:26396035   PMID:26413624   PMID:26439224   PMID:26503042   PMID:26586663   PMID:26598555   PMID:26681021   PMID:26708182   PMID:26763079   PMID:26813461  
PMID:26923576   PMID:26939868   PMID:27036872   PMID:27060017   PMID:27072237   PMID:27126736   PMID:27133203   PMID:27164955   PMID:27301615   PMID:27363062   PMID:27372649   PMID:27439004  
PMID:27458160   PMID:27466499   PMID:27612613   PMID:27620880   PMID:27659963   PMID:27708252   PMID:27722773   PMID:27733124   PMID:27744091   PMID:27747480   PMID:27868196   PMID:27975171  
PMID:27982773   PMID:27988334   PMID:27997905   PMID:28025049   PMID:28060742   PMID:28107808   PMID:28117425   PMID:28118383   PMID:28122882   PMID:28183533   PMID:28244687   PMID:28279229  
PMID:28290552   PMID:28303331   PMID:28361415   PMID:28374767   PMID:28457321   PMID:28492549   PMID:28495268   PMID:28495754   PMID:28501895   PMID:28570669   PMID:28651490   PMID:28662151  
PMID:28676533   PMID:28733472   PMID:28977001   PMID:29065929   PMID:29076766   PMID:29098793   PMID:29146554   PMID:29189156   PMID:29270751   PMID:29345720   PMID:29397206   PMID:29462681  
PMID:29486133   PMID:29568872   PMID:29574217   PMID:29710417   PMID:29921384   PMID:29931049   PMID:29950684   PMID:29956769   PMID:29974845   PMID:30024334   PMID:30030103   PMID:30106099  
PMID:30155986   PMID:30293733   PMID:30320897   PMID:30463298   PMID:30597662   PMID:30676864   PMID:30694693   PMID:30696066   PMID:30816491   PMID:30910851   PMID:30964182   PMID:30974023  
PMID:30995112   PMID:31002144   PMID:31078154   PMID:31114978   PMID:31121197   PMID:31173277   PMID:31219430   PMID:31241138   PMID:31254006   PMID:31288583   PMID:31364104   PMID:31406128  
PMID:31408201   PMID:31432121   PMID:31549396   PMID:31567367   PMID:31583245   PMID:31652450   PMID:31734543   PMID:32066777   PMID:32141587   PMID:32169062   PMID:32189115   PMID:32210705  
PMID:32307402   PMID:32437020   PMID:32466159   PMID:32492657   PMID:32535814   PMID:32650726   PMID:32710087   PMID:32745464   PMID:32791190   PMID:32918705   PMID:33008083   PMID:33255287  
PMID:33303971   PMID:33378064   PMID:33379399   PMID:33398803   PMID:33479328   PMID:33635529   PMID:33741460   PMID:33904385   PMID:33908150   PMID:33914010   PMID:33994507   PMID:34052675  
PMID:34081793   PMID:34245724   PMID:34545676   PMID:34781187   PMID:34830409   PMID:34842278   PMID:34948299   PMID:34951343   PMID:34957570   PMID:35220129   PMID:35432725   PMID:35554780  
PMID:35596908   PMID:36662655   PMID:36922327   PMID:36941405   PMID:36960578   PMID:37366599   PMID:37711087   PMID:37954484   PMID:38063099  


Genomics

Comparative Map Data
Vegfa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8922,452,854 - 22,468,194 (+)NCBIGRCr8
mRatBN7.2914,955,300 - 14,970,641 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx923,540,015 - 23,555,341 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0928,602,643 - 28,617,969 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0926,903,445 - 26,918,771 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0917,340,341 - 17,355,681 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0916,232,415 - 16,247,658 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4910,520,730 - 10,536,071 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1910,519,065 - 10,531,506 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBICelera
Cytogenetic Map9q12NCBI
VEGFA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38643,770,211 - 43,786,487 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl643,770,184 - 43,786,487 (+)EnsemblGRCh38hg38GRCh38
GRCh37643,737,946 - 43,754,224 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36643,845,931 - 43,862,202 (+)NCBINCBI36Build 36hg18NCBI36
Build 34643,845,923 - 43,860,314NCBI
Celera645,289,570 - 45,305,849 (+)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef643,458,106 - 43,474,385 (+)NCBIHuRef
CHM1_1643,741,412 - 43,757,691 (+)NCBICHM1_1
T2T-CHM13v2.0643,599,724 - 43,616,002 (+)NCBIT2T-CHM13v2.0
Vegfa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391746,327,919 - 46,343,303 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1746,327,919 - 46,343,295 (-)EnsemblGRCm39 Ensembl
GRCm381746,016,993 - 46,032,377 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1746,016,993 - 46,032,369 (-)EnsemblGRCm38mm10GRCm38
MGSCv371746,153,942 - 46,169,326 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361745,480,574 - 45,495,331 (-)NCBIMGSCv36mm8
Celera1749,448,065 - 49,463,499 (-)NCBICelera
Cytogenetic Map17CNCBI
cM Map1722.79NCBI
Vegfa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554379,527,445 - 9,541,908 (+)NCBIChiLan1.0ChiLan1.0
VEGFA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2558,269,186 - 58,285,503 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1654,138,950 - 54,155,259 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0643,361,053 - 43,377,366 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1644,651,855 - 44,666,353 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl644,650,365 - 44,666,353 (+)Ensemblpanpan1.1panPan2
VEGFA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11212,209,032 - 12,224,978 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1212,208,231 - 12,224,965 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1212,235,225 - 12,250,737 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01212,693,104 - 12,708,614 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1212,691,593 - 12,708,601 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11212,217,730 - 12,233,243 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01212,305,204 - 12,320,707 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01212,398,451 - 12,413,981 (+)NCBIUU_Cfam_GSD_1.0
Vegfa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494647,698,881 - 47,715,068 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647616,247,100 - 16,260,673 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647616,245,134 - 16,261,180 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VEGFA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl738,746,052 - 38,761,366 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1738,746,393 - 38,762,282 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2744,459,821 - 44,475,711 (+)NCBISscrofa10.2Sscrofa10.2susScr3
VEGFA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11728,377,959 - 28,394,508 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604443,823,884 - 43,842,951 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Vegfa
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475415,929,414 - 15,943,637 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Vegfa
56 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1730
Count of miRNA genes:283
Interacting mature miRNAs:378
Transcripts:ENSRNOT00000026559, ENSRNOT00000026637, ENSRNOT00000042790, ENSRNOT00000044163
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat

Markers in Region
D9Wox43  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2914,970,042 - 14,970,204 (+)MAPPERmRatBN7.2
Rnor_6.0917,355,083 - 17,355,244NCBIRnor6.0
Rnor_5.0916,247,060 - 16,247,221UniSTSRnor5.0
RGSC_v3.4910,535,473 - 10,535,634UniSTSRGSC3.4
Celera912,716,167 - 12,716,328UniSTS
Cytogenetic Map9q12UniSTS
D9Wox42  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2914,969,054 - 14,969,244 (+)MAPPERmRatBN7.2
Rnor_6.0917,354,095 - 17,354,284NCBIRnor6.0
Rnor_5.0916,246,072 - 16,246,261UniSTSRnor5.0
RGSC_v3.4910,534,485 - 10,534,674UniSTSRGSC3.4
Celera912,715,179 - 12,715,368UniSTS
Cytogenetic Map9q12UniSTS
PMC20712P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2914,954,367 - 14,955,301 (+)MAPPERmRatBN7.2
Rnor_6.0917,339,409 - 17,340,342NCBIRnor6.0
Rnor_5.0916,231,483 - 16,232,416UniSTSRnor5.0
RGSC_v3.4910,519,798 - 10,520,731UniSTSRGSC3.4
Celera912,700,493 - 12,701,426UniSTS
Cytogenetic Map9q12UniSTS
VEGF_1127  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2914,969,190 - 14,970,014 (+)MAPPERmRatBN7.2
Rnor_6.0917,354,231 - 17,355,054NCBIRnor6.0
Rnor_5.0916,246,208 - 16,247,031UniSTSRnor5.0
RGSC_v3.4910,534,621 - 10,535,444UniSTSRGSC3.4
Celera912,715,315 - 12,716,138UniSTS
Cytogenetic Map9q12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High 1
Medium 3 43 54 41 16 41 8 11 74 35 34 10 8
Low 3 3 7
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001110333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001287114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001317043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_031836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_105011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC108326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF062644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF080594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF215725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF215726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF222779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF260425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF261751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY033503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY033504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY033505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY033506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY033507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY033508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY378102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY702972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC168708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ203400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB718631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB810370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK357826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK358638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK364938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK602714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO565920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV107730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU040284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU040285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GQ423618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT971352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L20913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M32167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U22372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000026559   ⟹   ENSRNOP00000026559
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)Ensembl
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000026637   ⟹   ENSRNOP00000026637
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)Ensembl
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000042790   ⟹   ENSRNOP00000047820
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)Ensembl
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000044163   ⟹   ENSRNOP00000050127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,955,300 - 14,970,641 (+)Ensembl
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000083811   ⟹   ENSRNOP00000074002
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,955,777 - 14,967,569 (+)Ensembl
Rnor_6.0 Ensembl917,340,341 - 17,355,681 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000085241   ⟹   ENSRNOP00000071481
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl917,341,344 - 17,353,800 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000097210   ⟹   ENSRNOP00000078547
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl914,961,731 - 14,967,569 (+)Ensembl
RefSeq Acc Id: NM_001110333   ⟹   NP_001103803
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Rnor_5.0916,232,415 - 16,247,658 (+)NCBI
RGSC_v3.4910,520,730 - 10,536,071 (+)RGD
Celera912,701,425 - 12,716,765 (+)RGD
Sequence:
RefSeq Acc Id: NM_001110334   ⟹   NP_001103804
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Rnor_5.0916,232,415 - 16,247,658 (+)NCBI
RGSC_v3.4910,520,730 - 10,536,071 (+)RGD
Celera912,701,425 - 12,716,765 (+)RGD
Sequence:
RefSeq Acc Id: NM_001110335   ⟹   NP_001103805
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,460,278 - 22,468,194 (+)NCBI
mRatBN7.2914,962,725 - 14,970,641 (+)NCBI
Rnor_6.0917,347,765 - 17,355,681 (+)NCBI
Rnor_5.0916,232,415 - 16,247,658 (+)NCBI
RGSC_v3.4910,520,730 - 10,536,071 (+)RGD
Celera912,708,849 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001110336   ⟹   NP_001103806
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,460,278 - 22,468,194 (+)NCBI
mRatBN7.2914,962,725 - 14,970,641 (+)NCBI
Rnor_6.0917,347,765 - 17,355,681 (+)NCBI
Rnor_5.0916,232,415 - 16,247,658 (+)NCBI
RGSC_v3.4910,520,730 - 10,536,071 (+)RGD
Celera912,708,849 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287107   ⟹   NP_001274036
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287108   ⟹   NP_001274037
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287110   ⟹   NP_001274039
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287111   ⟹   NP_001274040
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287112   ⟹   NP_001274041
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287113   ⟹   NP_001274042
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001287114   ⟹   NP_001274043
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001317043   ⟹   NP_001303972
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
RefSeq Acc Id: NM_031836   ⟹   NP_114024
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Rnor_5.0916,232,415 - 16,247,658 (+)NCBI
RGSC_v3.4910,520,730 - 10,536,071 (+)RGD
Celera912,701,425 - 12,716,765 (+)RGD
Sequence:
RefSeq Acc Id: NR_105011
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8922,452,854 - 22,468,194 (+)NCBI
mRatBN7.2914,955,300 - 14,970,641 (+)NCBI
Rnor_6.0917,340,341 - 17,355,681 (+)NCBI
Celera912,701,425 - 12,716,765 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001103803 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103804 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103805 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103806 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274036 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274037 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274039 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274040 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274041 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274042 (Get FASTA)   NCBI Sequence Viewer  
  NP_001274043 (Get FASTA)   NCBI Sequence Viewer  
  NP_001303972 (Get FASTA)   NCBI Sequence Viewer  
  NP_114024 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA41211 (Get FASTA)   NCBI Sequence Viewer  
  AAA42334 (Get FASTA)   NCBI Sequence Viewer  
  AAC16448 (Get FASTA)   NCBI Sequence Viewer  
  AAC36708 (Get FASTA)   NCBI Sequence Viewer  
  AAF19211 (Get FASTA)   NCBI Sequence Viewer  
  AAF19212 (Get FASTA)   NCBI Sequence Viewer  
  AAF25958 (Get FASTA)   NCBI Sequence Viewer  
  AAI68708 (Get FASTA)   NCBI Sequence Viewer  
  AAK49396 (Get FASTA)   NCBI Sequence Viewer  
  AAK49408 (Get FASTA)   NCBI Sequence Viewer  
  AAL07523 (Get FASTA)   NCBI Sequence Viewer  
  AAL07524 (Get FASTA)   NCBI Sequence Viewer  
  AAL07525 (Get FASTA)   NCBI Sequence Viewer  
  AAL07526 (Get FASTA)   NCBI Sequence Viewer  
  AAL07527 (Get FASTA)   NCBI Sequence Viewer  
  AAL07528 (Get FASTA)   NCBI Sequence Viewer  
  AAU36606 (Get FASTA)   NCBI Sequence Viewer  
  ABW02818 (Get FASTA)   NCBI Sequence Viewer  
  ABW02819 (Get FASTA)   NCBI Sequence Viewer  
  ACV52076 (Get FASTA)   NCBI Sequence Viewer  
  APA62567 (Get FASTA)   NCBI Sequence Viewer  
  EDM18768 (Get FASTA)   NCBI Sequence Viewer  
  EDM18769 (Get FASTA)   NCBI Sequence Viewer  
  EDM18770 (Get FASTA)   NCBI Sequence Viewer  
  EDM18771 (Get FASTA)   NCBI Sequence Viewer  
  EDM18772 (Get FASTA)   NCBI Sequence Viewer  
  EDM18773 (Get FASTA)   NCBI Sequence Viewer  
  EDM18774 (Get FASTA)   NCBI Sequence Viewer  
  EDM18775 (Get FASTA)   NCBI Sequence Viewer  
  EDM18776 (Get FASTA)   NCBI Sequence Viewer  
  EDM18777 (Get FASTA)   NCBI Sequence Viewer  
  EDM18778 (Get FASTA)   NCBI Sequence Viewer  
  EDM18779 (Get FASTA)   NCBI Sequence Viewer  
  EDM18780 (Get FASTA)   NCBI Sequence Viewer  
  EDM18781 (Get FASTA)   NCBI Sequence Viewer  
  EDM18782 (Get FASTA)   NCBI Sequence Viewer  
  EDM18783 (Get FASTA)   NCBI Sequence Viewer  
  EDM18784 (Get FASTA)   NCBI Sequence Viewer  
  EDM18785 (Get FASTA)   NCBI Sequence Viewer  
  EDM18786 (Get FASTA)   NCBI Sequence Viewer  
  EDM18787 (Get FASTA)   NCBI Sequence Viewer  
  EDM18788 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000026559.4
  ENSRNOP00000026637
  ENSRNOP00000026637.5
  ENSRNOP00000047820
  ENSRNOP00000047820.3
  ENSRNOP00000050127
  ENSRNOP00000050127.3
  ENSRNOP00000074002.2
  ENSRNOP00000078547.1
GenBank Protein P16612 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_114024   ⟸   NM_031836
- Peptide Label: isoform 1
- UniProtKB: A0A0H2UHY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103803   ⟸   NM_001110333
- Peptide Label: isoform 2
- UniProtKB: B5DEK7 (UniProtKB/TrEMBL),   A0A0G2K6Z7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103804   ⟸   NM_001110334
- Peptide Label: isoform 3
- UniProtKB: F8WG85 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103805   ⟸   NM_001110335
- Peptide Label: isoform 4
- UniProtKB: A6JIV9 (UniProtKB/TrEMBL),   Q63672 (UniProtKB/TrEMBL),   Q63882 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103806   ⟸   NM_001110336
- Peptide Label: isoform 5
- UniProtKB: A6JIW0 (UniProtKB/TrEMBL),   B4XHA2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274036   ⟸   NM_001287107
- Peptide Label: isoform 6 precursor
- UniProtKB: Q9QXG6 (UniProtKB/Swiss-Prot),   Q9JKX7 (UniProtKB/Swiss-Prot),   Q91ZE1 (UniProtKB/Swiss-Prot),   Q541S6 (UniProtKB/Swiss-Prot),   Q9QXG7 (UniProtKB/Swiss-Prot),   P16612 (UniProtKB/Swiss-Prot),   A6JIU4 (UniProtKB/TrEMBL),   A0A8I5ZN58 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274040   ⟸   NM_001287111
- Peptide Label: isoform 9
- UniProtKB: A0A0H2UHY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274041   ⟸   NM_001287112
- Peptide Label: isoform 10 precursor
- UniProtKB: Q64FZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274037   ⟸   NM_001287108
- Peptide Label: isoform Vegf-A precursor
- UniProtKB: A6JIU7 (UniProtKB/TrEMBL),   C9DRV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274039   ⟸   NM_001287110
- Peptide Label: isoform 8 precursor
- UniProtKB: Q541S7 (UniProtKB/TrEMBL),   Q64FZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274042   ⟸   NM_001287113
- Peptide Label: isoform 11
- UniProtKB: A6JIV1 (UniProtKB/TrEMBL),   C9DRV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274043   ⟸   NM_001287114
- Peptide Label: isoform 12
- UniProtKB: A6JIV5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001303972   ⟸   NM_001317043
- Peptide Label: isoform Vegf-Ax precursor
- UniProtKB: B5DEK7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000071481   ⟸   ENSRNOT00000085241
RefSeq Acc Id: ENSRNOP00000026559   ⟸   ENSRNOT00000026559
RefSeq Acc Id: ENSRNOP00000026637   ⟸   ENSRNOT00000026637
RefSeq Acc Id: ENSRNOP00000074002   ⟸   ENSRNOT00000083811
RefSeq Acc Id: ENSRNOP00000050127   ⟸   ENSRNOT00000044163
RefSeq Acc Id: ENSRNOP00000047820   ⟸   ENSRNOT00000042790
RefSeq Acc Id: ENSRNOP00000078547   ⟸   ENSRNOT00000097210
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P16612-F1-model_v2 AlphaFold P16612 1-214 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696536
Promoter ID:EPDNEW_R7061
Type:single initiation site
Name:Vegfa_1
Description:vascular endothelial growth factor A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0917,340,333 - 17,340,393EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:619991 AgrOrtholog
BioCyc Gene G2FUF-28201 BioCyc
Ensembl Genes ENSRNOG00000019598 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000026559 ENTREZGENE
  ENSRNOT00000026559.6 UniProtKB/TrEMBL
  ENSRNOT00000026637 ENTREZGENE
  ENSRNOT00000026637.8 UniProtKB/TrEMBL
  ENSRNOT00000042790 ENTREZGENE
  ENSRNOT00000042790.4 UniProtKB/TrEMBL
  ENSRNOT00000044163 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000044163.5 UniProtKB/Swiss-Prot
  ENSRNOT00000083811.2 UniProtKB/TrEMBL
  ENSRNOT00000097210.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.160.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.10.90.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cystine-knot_cytokine UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PD_growth_factor_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDGF/VEGF_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEGF_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEGF_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:83785 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 83785 ENTREZGENE
PANTHER VASCULAR ENDOTHELIAL GROWTH FACTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VASCULAR ENDOTHELIAL GROWTH FACTOR A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PDGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VEGF_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB VEGFA RGD
PhenoGen Vegfa PhenoGen
PROSITE PDGF_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDGF_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019598 RatGTEx
SMART PDGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57593 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2K6Z7 ENTREZGENE, UniProtKB/TrEMBL
  A0A0H2UHY5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZN58 ENTREZGENE, UniProtKB/TrEMBL
  A6JIU4 ENTREZGENE, UniProtKB/TrEMBL
  A6JIU7 ENTREZGENE, UniProtKB/TrEMBL
  A6JIV0_RAT UniProtKB/TrEMBL
  A6JIV1 ENTREZGENE, UniProtKB/TrEMBL
  A6JIV5 ENTREZGENE, UniProtKB/TrEMBL
  A6JIV7_RAT UniProtKB/TrEMBL
  A6JIV9 ENTREZGENE, UniProtKB/TrEMBL
  A6JIW0 ENTREZGENE, UniProtKB/TrEMBL
  A6JIW2_RAT UniProtKB/TrEMBL
  A6JIW4_RAT UniProtKB/TrEMBL
  B4XHA2 ENTREZGENE, UniProtKB/TrEMBL
  B5DEK7 ENTREZGENE, UniProtKB/TrEMBL
  C9DRV0 ENTREZGENE, UniProtKB/TrEMBL
  F1M6X1_RAT UniProtKB/TrEMBL
  F8WG85 ENTREZGENE, UniProtKB/TrEMBL
  G8JLS5_RAT UniProtKB/TrEMBL
  P16612 ENTREZGENE
  Q541S6 ENTREZGENE
  Q541S7 ENTREZGENE, UniProtKB/TrEMBL
  Q63672 ENTREZGENE, UniProtKB/TrEMBL
  Q63882 ENTREZGENE
  Q64FZ6 ENTREZGENE, UniProtKB/TrEMBL
  Q91ZE1 ENTREZGENE
  Q91ZE2_RAT UniProtKB/TrEMBL
  Q9JKX7 ENTREZGENE
  Q9QXG6 ENTREZGENE
  Q9QXG7 ENTREZGENE
  VEGFA_RAT UniProtKB/Swiss-Prot
UniProt Secondary Q541S6 UniProtKB/Swiss-Prot
  Q63882 UniProtKB/TrEMBL
  Q91ZE1 UniProtKB/Swiss-Prot
  Q9JKX7 UniProtKB/Swiss-Prot
  Q9QXG6 UniProtKB/Swiss-Prot
  Q9QXG7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-01-20 Vegfa  vascular endothelial growth factor A  Vegf  vascular endothelial growth factor  Symbol and Name updated 1299863 APPROVED
2002-08-07 Vegf        Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_pathway both an Etk downstream target and an Etk upstream activator 634256
gene_process has multiple effects on endothelial cells including cell proliferation, cell survival, and protection from injury 625593
gene_process mediates the proliferation of vascular endothelial cells; also promotes neurogenesis 625593
gene_process plays a role in both sprouting and longitudinal splitting processes of capillary growth 625663
gene_process binds to receptor tyrosine kinases on endothelial cells to stimulate angiogenesis 625663
gene_regulation expression increases after muscle stretch and shear stress stimulation 625663
gene_regulation induced by hypoxia 625663