Scfw5 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scfw5 (Subcutaneous fat weight QTL 5) Rattus norvegicus

Symbol: Scfw5
Name: Subcutaneous fat weight QTL 5
RGD ID: 9589055
Also known as: percentage of subcutaneous fat
Trait: subcutaneous adipose mass   (VT:1000472)    
Measurement Type: abdominal subcutaneous fat pad weight   (CMO:0002069)    
LOD Score: 5.55
P Value: 0.001
Variance: 5.6
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.291 - 37,999,212RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.091 - 40,383,872RGD_MAPPER_PIPELINERnor6.0
Rnor_5.091 - 39,272,707RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.491 - 33,599,535RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3080Mep1ameprin A subunit alpha91747463417504147Rat
3452Ptprsprotein tyrosine phosphatase, receptor type, S912454081307015Rat
3549Prph2peripherin 291406614914081454Rat
2719Gnmtglycine N-methyltransferase91425467514258028Rat
2753Gsta1glutathione S-transferase alpha 192370347623720121Rat
69198Rcan2regulator of calcineurin 291695947817174823Rat
61899Slc29a1solute carrier family 29 member 191539966115414203Rat
69270Slc5a7solute carrier family 5 member 7975954407626258Rat
619730Tubb4atubulin, beta 4A class IVa919178411925286Rat
61871RhagRh-associated glycoprotein92006980020097836Rat
3951Vav1vav guanine nucleotide exchange factor 1921619852209951Rat
70892Cdc5lcell division cycle 5-like91556494915603453Rat
2282Runx2RUNX family transcription factor 291616750416492826Rat
2293Ccnd3cyclin D391339416113400341Rat
2232C3complement C3920874372114366Rat
3943Pgcprogastricsin91325746213265682Rat
708456Sh3gl1SH3 domain containing GRB2 like 1, endophilin A29842285869753Rat
621494Nrtnneurturin915818601587835Rat
628848Kcnq5potassium voltage-gated channel subfamily Q member 592383018524395984Rat
631433Prim2DNA primase subunit 293569237635904521Rat
621699Slc22a7solute carrier family 22 member 791454707314554354Rat
620936Rab5aRAB5A, member RAS oncogene family964839066512877Rat
727925Lgsnlengsin, lens protein with glutamine synthetase domain93341636233447919Rat
2888Il17ainterleukin 17A92314440223147889Rat
620382Dnph12'-deoxynucleoside 5'-phosphate N-hydrolase 191448129614484034Rat
628680Uxs1UDP-glucuronate decarboxylase 19653740731121Rat
621637Pex6peroxisomal biogenesis factor 691425814514270335Rat
620659Clic5chloride intracellular channel 591671098016813427Rat
727974Tnfsf9TNF superfamily member 9919440171946351Rat
631367Spats1spermatogenesis associated, serine-rich 191552717915562286Rat
621653Crisp2cysteine-rich secretory protein 292010764920131967Rat
619991Vegfavascular endothelial growth factor A91495530014970641Rat
621598Lonp1lon peptidase 1, mitochondrial914474441459771Rat
621738Khdrbs2KH RNA binding domain containing, signal transduction associated 293444702334953684Rat
621828KhsrpKH-type splicing regulatory protein918625551872301Rat
621679Adgrf5adhesion G protein-coupled receptor F591751759617624107Rat
62085Rpl36ribosomal protein L36914419861447397Rat
620000Rims1regulating synaptic membrane exocytosis 192469695925196368Rat
621145Trip10thyroid hormone receptor interactor 10921330852147795Rat
727959Byslbystin-like91338280613392557Rat
621064Sult1c2sulfotransferase family 1C member 2968248406848830Rat
621477Eif4g2-ps1eukaryotic translation initiation factor 4, gamma 2, pseudogene 193304688433050665Rat
621013Hdgfl2HDGF like 29909581929195Rat
620787Slc25a27solute carrier family 25, member 2791730689817333942Rat
619846Crisp3cysteine-rich secretory protein 392043205120472663Rat
1304925Phf3PHD finger protein 393306385533136013Rat
1304927Fam135afamily with sequence similarity 135, member A92642011626500803Rat
621388Ptcrapre T-cell antigen receptor alpha91421836614229141Rat
727803Cd2apCD2-associated protein91808674418182744Rat
1305168Mcm3minichromosome maintenance complex component 392321916923237314Rat
621070Kif6kinesin family member 691107620311373205Rat
1304864Tfap2dtranscription factor AP-2 delta92168015721744840Rat
69278Sema6bsemaphorin 6B9950939967905Rat
2549Kcnh8potassium voltage-gated channel subfamily H member 8955060445945828Rat
70976Nfyanuclear transcription factor Y subunit alpha91258743712613911Rat
3768Sult1c3sulfotransferase family 1C member 3972215807266991Rat
620613Safbscaffold attachment factor B914174491438408Rat
1302946Capn11calpain 1191534405915365604Rat
1303340Vmacvimentin-type intermediate filament associated coiled-coil protein915467471550417Rat
735070NfkbieNFKB inhibitor epsilon91544360015450437Rat
1303292Ndufa11NADH:ubiquinone oxidoreductase subunit A11915504871554546Rat
1304653Ccdc115coiled-coil domain containing 11593665038436654348Rat
1306415Med20mediator complex subunit 2091337014613382756Rat
1306321Tfap2btranscription factor AP-2 beta92178625021815785Rat
1306128Daam2dishevelled associated activator of morphogenesis 291142891311546982Rat
1305561Satb1SATB homeobox 1946778174773061Rat
1306367Gtpbp2GTP binding protein 291481396414823419Rat
1305862Tmem63btransmembrane protein 63B91531386715340722Rat
1305865Zfp451zinc finger protein 45193598544136040991Rat
61970Ptp4a1protein tyrosine phosphatase 4A193321420133245046Rat
1307308Tnfrsf21TNF receptor superfamily member 2191787915617954085Rat
1307167Trerf1transcriptional regulating factor 191363161913858326Rat
1306555Klc4kinesin light chain 491433716414351075Rat
735149Gpr108G protein-coupled receptor 108921207402131771Rat
1305902Kat2blysine acetyltransferase 2B965625256667064Rat
1306696Abcc10ATP binding cassette subfamily C member 1091465724214677178Rat
1306566Dstdystonin93613565736529617Rat
3432Pspnpersephin918411051841663Rat
1306718Adgrf2adhesion G protein-coupled receptor F291823838918248745Rat
1305885Sult1c2asulfotransferase family, cytosolic, 1C, member 2a968736976904736Rat
1306756Tbcctubulin folding cofactor C91409887514100026Rat
1305744Tcte1t-complex-associated testis expressed 191546357315482258Rat
1309276Prss39protease, serine, 3993669503736713004Rat
1311710Paqr8progestin and adipoQ receptor family member 892331252123362175Rat
1308423Taf8TATA-box binding protein associated factor 891349189213511713Rat
1303075Hsp90ab1heat shock protein 90 alpha family class B member 191543298615438358Rat
1309583Tfebtranscription factor EB91319889013254726Rat
1359199Enpp5ectonucleotide pyrophosphatase/phosphodiesterase family member 591691018716917633Rat
1309143Dlk2delta like non-canonical Notch ligand 291467710214681515Rat
1309689Polr1cRNA polymerase I and III subunit C91473574014739852Rat
1306867Rab23RAB23, member RAS oncogene family93594352235967367Rat
1311586Ptpn18protein tyrosine phosphatase, non-receptor type 1893667232536689963Rat
1309049RGD1309049similar to RIKEN cDNA 4933415F2392553116525532798Rat
1311522Xpo5exportin 591474018214778171Rat
1310472Ptk7protein tyrosine kinase 791435215514418494Rat
1309425Col9a1collagen type IX alpha 1 chain92658503426668222Rat
1305680BicralBICRA like chromatin remodeling complex associated protein91410025314185368Rat
1308463Imp4IMP U3 small nucleolar ribonucleoprotein 493665412736659265Rat
1308185Yipf3Yip1 domain family, member 391473028914735644Rat
1308469Rpl7l1ribosomal protein L7-like 191419810114206119Rat
1308471Mocs1molybdenum cofactor synthesis 191154753311573935Rat
1308476Pkhd1PKHD1 ciliary IPT domain containing fibrocystin/polyductin92254739623037443Rat
1310392Bend6BEN domain containing 693608103336135309Rat
1305941Plcl2phospholipase C-like 2932925643477009Rat
1310617Aars2alanyl-tRNA synthetase 2, mitochondrial91548463915496116Rat
1311516Mrps10mitochondrial ribosomal protein S1091361489713624819Rat
1308727Apobec2apolipoprotein B mRNA editing enzyme catalytic subunit 291256495512578461Rat
1308712Guca1aguanylate cyclase activator 1A91358769513598566Rat
1308299Oard1O-acyl-ADP-ribose deacylase 191257689412587264Rat
727869Opn5opsin 591836839318416098Rat
1306240Mrpl14mitochondrial ribosomal protein L1491530284015315195Rat
1310954Plekhb2pleckstrin homology domain containing B293704958037082231Rat
1308689Enpp4ectonucleotide pyrophosphatase/phosphodiesterase 491688892316898860Rat
1305956Tdrd6tudor domain containing 691734403317359348Rat
1306666Ppp2r5dprotein phosphatase 2, regulatory subunit B', delta91427036414300396Rat
1308191Guca1bguanylate cyclase activator 1B91359961913607455Rat
1309175Mad2l1bpMAD2L1 binding protein91483213314836458Rat
1308708Tjap1tight junction associated protein 191470141814725751Rat
1307147Mrpl2mitochondrial ribosomal protein L291433323314337006Rat
1307182RGD1307182similar to RIKEN cDNA B430306N03 gene91268129012690555Rat
735229Mrps18amitochondrial ribosomal protein S18A91485332214869819Rat
1307105Klhdc3kelch domain containing 391430234514308736Rat
1310226Frs3fibroblast growth factor receptor substrate 391328855913297285Rat
1309841Trem2triggering receptor expressed on myeloid cells 291264760512654190Rat
1306627Pgk2phosphoglycerate kinase 292048036720481933Rat
1307710Tmem14atransmembrane protein 14A92364059423652379Rat
1310285Adgrf1adhesion G protein-coupled receptor F191766125817696359Rat
1311386Foxp4forkhead box P491305850613115406Rat
1311398Il17finterleukin 17F92319009423201482Rat
1305477Trem3triggering receptor expressed on myeloid cells 391274982112762547Rat
1309467Trem1triggering receptor expressed on myeloid cells 191276381912779285Rat
1311406Ncr2natural cytotoxicity triggering receptor 291277719512828437Rat
1308920Col19a1collagen type XIX alpha 1 chain92667391627022139Rat
1309893PolhDNA polymerase eta91477835514813210Rat
1308498Ogfrl1opioid growth factor receptor-like 192582886525842424Rat
1310693Rsph9radial spoke head component 991483956514860062Rat
1307471Cyp39a1cytochrome P450, family 39, subfamily a, polypeptide 191723045517306775Rat
1563979Prickle4prickle planar cell polarity protein 491329749413305635Rat
1561390Lrrc73leucine rich repeat containing 7391472615714730144Rat
1560901RGD1560901similar to actin, alpha 1, skeletal muscle975012257502327Rat
1562008Cul9cullin 991443594814479552Rat
1559758Defb18defensin beta 1892085230020853211Rat
1560245Defb49defensin beta 4992083268720837352Rat
620903B3gat2beta-1,3-glucuronyltransferase 292616717426250153Rat
1565035Crb3crumbs cell polarity complex component 3918985311903860Rat
1562461RGD1562461similar to 60S acidic ribosomal protein P193684993236855302Rat
1563347Rftn1raftlin lipid raft linker 191080461111002084Rat
1565216Adgrf4adhesion G protein-coupled receptor F491827205018303219Rat
1564986LOC301165similar to hypothetical protein 4932415M13967079916732613Rat
1566020Stap2signal transducing adaptor family member 29828369838648Rat
1564811Pp2d1protein phosphatase 2C-like domain containing 1965122826533653Rat
1563228Dus3ldihydrouridine synthase 3-like915934911598663Rat
1359641Adgre4adhesion G protein-coupled receptor E4997581069901908Rat
1560420Amer3APC membrane recruitment protein 393679035536802341Rat
1565718Defb17defensin beta 1792088038020883895Rat
1560533RGD1560533similar to 40S ribosomal protein S1493715329037153723Rat
1562074Tmem151btransmembrane protein 151B91545674615464287Rat
1559808RGD1559808similar to 40S ribosomal protein S26960190316020447Rat
1359464Lrg1leucine-rich alpha-2-glycoprotein 19947516949773Rat
1562800LOC302192similar to RIKEN cDNA 1700001E04961708736180127Rat
1309703Adgrb3adhesion G protein-coupled receptor B392742116828148979Rat
1562851RGD1562851similar to ribosomal protein L31948447734845186Rat
1559518Ttbk1tau tubulin kinase 191449316614538372Rat
1559663St6gal2ST6 beta-galactoside alpha-2,6-sialyltransferase 2991817449274161Rat
1560271MdfiMyoD family inhibitor91315680613175218Rat
1310513Usp49ubiquitin specific peptidase 4991330564013366132Rat
1561112Fem1afem-1 homolog A910916951093901Rat
1563020Ptchd4patched domain containing 491846293418666272Rat
1559960RGD1559960similar to Sulfotransferase K1 (rSULT1C2)971612167203155Rat
1559965RGD1559965similar to WW domain binding protein 1193076218030763745Rat
1559787Srfserum response factor91442645314435734Rat
1310734Pla2g7phospholipase A2 group VII91736221417404476Rat
1562107RGD1562107similar to class-alpha glutathione S-transferase92361969123628517Rat
1564244Cyp2ac1cytochrome P450, family 2, subfamily ac, polypeptide 192003582320058570Rat
708471Lmbrd1LMBR1 domain containing 192709638727178095Rat
1560151Ankrd66ankyrin repeat domain 6691742143217441212Rat
1311831Lrfn2leucine rich repeat and fibronectin type III domain containing 291189742512066177Rat
1359451Cenpqcentromere protein Q91995704019972807Rat
1586396LOC689904similar to ubiquitin-conjugating enzyme E2 variant 193363377033634238Rat
1585834LOC680955hypothetical protein LOC68095591289530312898622Rat
1585869LOC680920similar to natural cytotoxicity triggering receptor 291284354212858881Rat
1583567Tomm6translocase of outer mitochondrial membrane 691330411113305637Rat
1566137RGD1566137similar to ribosomal protein L10a92372079823721498Rat
1584090LOC688876similar to peptidyl-prolyl isomerase G (cyclophilin G)92315970023162455Rat
1586485LOC688615similar to ubiquinol-cytochrome c reductase binding protein92035341420353798Rat
1587643Glyatl3glycine-N-acyltransferase-like 391998423919994762Rat
1582873Pot1bprotection of telomeres 1B996703559728624Rat
1582883Vom2r77vomeronasal 2 receptor, 77995728749638896Rat
1587228LOC501456similar to GTPase activating protein testicular GAP19369117372417Rat
1587365Efhc1EF-hand domain containing 192337581523414283Rat
1587368Unc5clunc-5 family C-terminal like91252810912543382Rat
1566407EfhbEF hand domain family, member B963721916441678Rat
1583850Fsd1fibronectin type III and SPRY domain containing 19818241821761Rat
1583221Zfp318zinc finger protein 31891456295814601557Rat
1562188Cfc1cripto, FRL-1, cryptic family 193674210636751931Rat
1583959LOC691414hypothetical protein LOC691414999547209964136Rat
1561662RGD1561662similar to AI661453 protein91352482213561756Rat
1565018Crip3cysteine-rich protein 391455445014557344Rat
1561626Tbc1d5TBC1 domain family, member 5935033284017131Rat
1562466Defb16-psdefensin beta 16 pseudogene92087528520883814Rat
1565959RGD1565959RGD156595991287369712886364Rat
1565402Gsta6glutathione S-transferase alpha 692374326223806260Rat
1561330Prss40protease, serine, 4093676217036770979Rat
1359646Gtf2f1general transcription factor IIF subunit 1918440271853455Rat
1565175Treml1triggering receptor expressed on myeloid cells-like 191263558412642929Rat
1583985Fam168bfamily with sequence similarity 168, member B93700556937038631Rat
1563631Znrf4zinc and ring finger 4913533081354496Rat
1565318Slc35b2solute carrier family 35 member B291543859415442227Rat
1586327LOC689973similar to pigpen93554914035550782Rat
1588579Rfx2regulatory factor X2916046361671220Rat
1588580Acsbg2acyl-CoA synthetase bubblegum family member 2916838461715517Rat
1588581Mllt1MLLT1, super elongation complex subunit917310771775985Rat
1588582Acer1alkaline ceramidase 1917927901824434Rat
1588583Clppcaseinolytic mitochondrial matrix peptidase proteolytic subunit918316801837700Rat
1588585Slc25a41solute carrier family 25, member 41918736921881405Rat
1588586Slc25a23solute carrier family 25 member 23918826361898340Rat
1589151Tram2translocation associated membrane protein 292341920423498745Rat
1589467Ebi3Epstein-Barr virus induced 39774252787544Rat
1590809LOC367240hypothetical LOC36724093567960735690156Rat
1588577Safb2scaffold attachment factor B2913958521417010Rat
1590246Znrd1aszinc ribbon domain containing 1 antisense91609862416099790Rat
1589601Yju2YJU2 splicing factor homolog9789603799505Rat
1591345LOC685668hypothetical protein LOC68566891066477010683943Rat
1588569Vom2r76vomeronasal 2 receptor, 76994679619492317Rat
1588571Vom2r79vomeronasal 2 receptor, 79925058972553420Rat
1590865Chaf1achromatin assembly factor 1 subunit A9873953900701Rat
1590866Ubxn6UBX domain protein 69900883906047Rat
1590867Plin4perilipin 49929168938062Rat
1590868Ticam1toll-like receptor adaptor molecule 1911025591115573Rat
1590869Dennd1cDENN domain containing 1C919040401916329Rat
1590872Vom2r-ps138vomeronasal 2 receptor, pseudogene 138999264929946415Rat
1592929LOC681600similar to eukaryotic translation initiation factor 4, gamma 1 isoform a978568797861321Rat
1589335MpndMPN domain containing9839473846446Rat
1590757Crisp1cysteine-rich secretory protein 192074177520768796Rat
1590775LOC501115similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30)93182950531830438Rat
1591980Gsta3glutathione S-transferase alpha 392365857423684240Rat
1588572Tnfsf14TNF superfamily member 14920690752073128Rat
1588573Cd70Cd70 molecule920065632009715Rat
1588574Tnfaip8l1TNF alpha induced protein 8 like 19988587999342Rat
1588575Dpp9dipeptidyl peptidase 9910113471046337Rat
1588576Kdm4blysine demethylase 4B911587371237228Rat
1588578Micos13mitochondrial contact site and cristae organizing system subunit 13914390581442092Rat
1588829LOC688459hypothetical protein LOC68845992002491620029094Rat
1589660LOC367399similar to Transaldolase982753008276318Rat
1588537LOC360998hypothetical LOC36099891007694910085216Rat
1588543Brcc3BRCA1/BRCA2-containing complex, subunit 3919869421989484Rat
1585200LOC690009similar to Cofilin-2 (Cofilin, muscle isoform)93593445635934941Rat
1587048Cul7cullin 791431910214333035Rat
1587662Mmutmethylmalonyl-CoA mutase91992872019956985Rat
1590885Shdsrc homology 2 domain-containing transforming protein D9799652809769Rat
1585173Bag2BAG cochaperone 293597003335980677Rat
1588473LOC367454similar to Alpha-(1,3)-fucosyltransferase (Galactoside 3-L-fucosyltransferase) (Fucosyltransferase 6) (FUCT-VI)915696051572022Rat
1586098LOC365085similar to nidogen 29534980555257Rat
1359214Adgre1adhesion G protein-coupled receptor E1922424762398000Rat
1589919LOC689659similar to Reticulocalbin-1 precursor927735362775324Rat
1584839LOC679702similar to potassium channel, subfamily K, member 1691105906911064995Rat
1588998Sdhaf4succinate dehydrogenase complex assembly factor 492640832826416549Rat
1586777LOC684715similar to Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen)92555610225556765Rat
1586179Arhgef4Rho guanine nucleotide exchange factor 493686180037005079Rat
1586180p53-psWistar clone pR53P1 p53 pseudogene92381058023812111Rat
1589602Plin5perilipin 59939745946188Rat
1589603Mydgfmyeloid-derived growth factor99996591008895Rat
1589604Ranbp3RAN binding protein 3915072331544460Rat
1589605LOC501280similar to myosin regulatory light chain-like916783361679276Rat
1587021Treml4triggering receptor expressed on myeloid cells-like 491271896812743879Rat
1585305LOC688701similar to heterogeneous nuclear ribonucleoproteins methyltransferase-like 292129985121301148Rat
1587039Treml2triggering receptor expressed on myeloid cells-like 291269445312705379Rat
1591762LOC680438hypothetical protein LOC680438910781911088987Rat
1597396Khdc1KH domain containing 192381244223814932Rat
1595447Prr22proline rich 22915986921601003Rat
1596995LOC503243similar to CG8435-PA91583190715835273Rat
1596997LOC503237similar to Chromatin assembly factor 1 subunit CG4236-PA962818786283078Rat
1591748Arrdc5arrestin domain containing 5911266441132736Rat
1596202Khdc1bKH domain containing 1B92382199323827647Rat
1591714Dazldeleted in azoospermia-like91069557210712443Rat
1594018Tspo2translocator protein 291254461512548563Rat
1592055LOC363208similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP)93240353632405287Rat
1595639LOC503350similar to reticulocalbin91000684710013135Rat
1592341Vom2r-ps141vomeronasal 2 receptor, pseudogene 141925977032598602Rat
1588763LOC689725similar to chromosome 9 open reading frame 7992899323128999521Rat
1594167Catsperdcation channel sperm associated auxiliary subunit delta914599671498342Rat
1593237Ubr2ubiquitin protein ligase E3 component n-recognin 291398242714062315Rat
1593238Sgo1shugoshin 1966721096687908Rat
1585595Smap1small ArfGAP 192625017826342151Rat
1591063LOC689564similar to 60S ribosomal protein L1192722390727224465Rat
1594773LOC689279similar to heterogeneous nuclear ribonucleoprotein C92537089225371782Rat
1594784LOC689268hypothetical protein LOC689268928494532889694Rat
1591316Supt3hSPT3 homolog, SAGA and STAGA complex component91587829616206768Rat
1588705LOC689783similar to DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b93279874632799447Rat
1586334LOC689966similar to zinc finger protein 62293547860335480175Rat
1598126Alkbh7alkB homolog 7918388861841044Rat
1595854Plin3perilipin 3911111781123117Rat
1595855Uhrf1ubiquitin-like with PHD and ring finger domains 1911331171154639Rat
1595856LOC316124similar to gonadotropin-regulated long chain acyl-CoA synthetase916993371727637Rat
1597751Mea1male-enhanced antigen 191430028314304130Rat
1596723LOC681367hypothetical protein LOC68136791420798814209134Rat
1597709Cnpy3canopy FGF signaling regulator 391423347814247847Rat
1626052Vom2r-ps140vomeronasal 2 receptor, pseudogene 140924364302449682Rat
2306314Rps2-ps6ribosomal protein S2, pseudogene 691482672914827651Rat
2318601LOC100365684hypothetical LOC100365684931443063145830Rat
2318113LOC100362475zinc finger protein 70693297066932970915Rat
2318314LOC100362372chaperonin containing Tcp1, subunit 7 (eta)-like92323722223241597Rat
2318365LOC100362320hypothetical LOC10036232092906258729063019Rat
2321302LOC100360856hypothetical protein LOC100360856929076642916404Rat
2322080Sh2d3aSH2 domain containing 3A921488032158150Rat
2322325LOC100360328hypothetical LOC100360328983847868389434Rat
2321693Rrp36ribosomal RNA processing 3691430881014316959Rat
2323094LOC100359951ribosomal protein S20-like941590264159544Rat
2322726LOC100360123antigenic determinant of rec-A protein-like91183393011835584Rat
2323380LOC100363260FCF1 small subunit-like949327784949393Rat
2323495LOC100359745golgi SNAP receptor complex member 1-like962500516250572Rat
2324265LOC10036269340S ribosomal protein S21-like9778351781683Rat
2323707LOC100362987ribosomal protein S27-like911547811157065Rat
2323882LOC100362897hypothetical LOC10036289792729459227295842Rat
2325434Mir7bmicroRNA 7b910802741080383Rat
2325527Mir133bmicroRNA 133b92309813423098217Rat
2325550Mir206microRNA 20692309424923094332Rat
2325587Mir30c2microRNA 30c-292575734225757425Rat
2325588Mir30amicroRNA 30a92573760025737670Rat
6489022LOC100912080partner of Y14 and mago-like927346382735529Rat
6489933Spata31e1SPATA31 subfamily E, member 193109820631104301Rat
6494554LOC10091112660S ribosomal protein L5-like91166787811669951Rat
6490497LOC10091182140S ribosomal protein S8-like9663722664348Rat
6492882LOC100911489uncharacterized LOC10091148991294137112943012Rat
6485345LOC100912849uncharacterized LOC10091284991356066313582987Rat
6499794LOC100910172brain acid soluble protein 1-like969239616924767Rat
6496783LOC100910812F-box/WD repeat-containing protein 2-like984033958408043Rat
6500396LOC100910044elongation factor 1-alpha 1-like93380476333825540Rat
6500780LOC100910005uncharacterized LOC10091000593563369035641769Rat
7515302LOC102548161uncharacterized LOC102548161913637041380543Rat
7526556LOC102550162uncharacterized LOC10255016291510214115135118Rat
7527318LOC102548541uncharacterized LOC10254854191990345319930674Rat
7538729LOC102551325cofilin-1-like960564456057501Rat
7503936LOC102553880uncharacterized LOC10255388092016945220174501Rat
7647959LOC102551615uncharacterized LOC10255161593623287736236460Rat
7634142LOC102551938sulfotransferase 1C2-like967939486801969Rat
7650881LOC102547352uncharacterized LOC10254735291188214611883458Rat
7651541LOC102549477heat shock 70 kDa protein 14-like922662852282720Rat
7637214LOC102554281uncharacterized LOC10255428193185543031907027Rat
7638136LOC102551518uncharacterized LOC10255151893663661736646847Rat
7642378LOC102548597NEDD4-binding protein 1-like997173159720322Rat
7657956LOC102554555uncharacterized LOC102554555931770153216869Rat
7629065LOC102548435uncharacterized LOC10254843591266494012672794Rat
7570521LOC102548200uncharacterized LOC10254820091244695312450780Rat
7590823LOC102548289uncharacterized LOC10254828993322266233247053Rat
7594246LOC102554116uncharacterized LOC10255411691303256913038429Rat
7556959LOC102548982serine/threonine-protein kinase SIK3-like995068299510000Rat
7580017LOC102553447uncharacterized LOC10255344792650725926562437Rat
7567345LOC102549795uncharacterized LOC10254979592334850723376276Rat
7587989LOC102555783uncharacterized LOC10255578391687721816888739Rat
7751678LOC10255542160S ribosomal protein L10-like936163773621886Rat
7694240LOC102555289zinc finger protein 709-like9746126775933Rat
7676682LOC102550934E3 ubiquitin-protein ligase makorin-1-like92367258623673857Rat
7706003LOC102549948uncharacterized LOC10254994892351713023522234Rat
7706024LOC102547840uncharacterized LOC10254784091241534912423539Rat
7683517LOC102547709uncharacterized LOC10254770991225737912272305Rat
7743195LOC102550123uncharacterized LOC10255012392361424323645208Rat
7671069LOC102550363uncharacterized LOC10255036391523935115259876Rat
7729430LOC102554152uncharacterized LOC10255415293005567730066038Rat
7680988LOC102555515uncharacterized LOC10255551593738719437388717Rat
7710987LOC102554309uncharacterized LOC10255430991326177413266883Rat
9092856LOC103691580uncharacterized LOC1036915809361381366432Rat
9095701LOC103690501uncharacterized LOC10369050191527904415280845Rat
9112006LOC10369049560S ribosomal protein L27a pseudogene985164298517495Rat
9117384LOC103690491uncharacterized LOC103690491959372075945454Rat
9166489LOC103693202uncharacterized LOC10369320291001878610019216Rat
9222779LOC103690504ubiquitin-conjugating enzyme E2 N-like92135783621358387Rat
9231519LOC103690503uncharacterized LOC10369050391642140216423640Rat
9281506LOC103690742uncharacterized LOC1036907429997335310002936Rat
9386527LOC103690103reticulocalbin-1-like91066528310671256Rat
9295718LOC103690509activated RNA polymerase II transcriptional coactivator p15 pseudogene91480024014802871Rat
9363755LOC103690510ADP-ribosylation factor-like protein 3 pseudogene92677224326773400Rat
9462719LOC103693194uncharacterized LOC103693194910463671049446Rat
9391503LOC103690497U1 small nuclear ribonucleoprotein C pseudogene923542732354832Rat
9400366LOC103690615transmembrane protein 234-like963822126382523Rat
9450374LOC103690514exocrine gland-secreted peptide 1-like92014367220150293Rat
9685200TincrTINCR ubiquitin domain containing913871051389337Rat
11368267LOC108351906ferritin light chain 1 pseudogene92394529823945851Rat
11365616LOC108351997heat shock protein HSP 90-beta-like92877386328789378Rat
11357182LOC10835201660S ribosomal protein L26 pseudogene943833894383798Rat
11433453LOC108351994exocrine gland-secreted peptide 1-like92020572720212941Rat
11463843LOC108348336uncharacterized LOC108348336928584842889166Rat
11470506LOC108351893uncharacterized LOC10835189391559848615607891Rat
11473325Trnak-cuu11transfer RNA lysine (anticodon CUU) 11912111441211216Rat
11474512LOC108351903uncharacterized LOC10835190392368406623690680Rat
11444069Trnae-uuc5transfer RNA glutamic acid (anticodon UUC) 593664787436647945Rat
11445694LOC108351419uncharacterized LOC1083514199264519281272Rat
11447770LOC108351878uncharacterized LOC108351878929253032935352Rat
11438663LOC10835187660S ribosomal protein L7 pseudogene997649519765788Rat
11372666LOC108352021uncharacterized LOC10835202192965376329662453Rat
11432264LOC108351894uncharacterized LOC10835189491668964916700163Rat
11426996Mymxmyomixer, myoblast fusion factor91539663815398264Rat
11396250LOC108351885uncharacterized LOC10835188591002522110036771Rat
11397802LOC108351900uncharacterized LOC10835190092066334820670645Rat
11376343LOC108351892uncharacterized LOC10835189291548649215493269Rat
11390506LOC10835199360S ribosomal protein L36a-like92018293820195730Rat
11380309LOC108351896uncharacterized LOC10835189691732570717353239Rat
11477544LOC108351895uncharacterized LOC10835189591681879716827112Rat
11497442LOC10835202060S ribosomal protein L23a pseudogene92589741325897934Rat
11484729LOC108351887uncharacterized LOC10835188791165233911678809Rat
41168059LOC120094782uncharacterized LOC120094782936842543705902Rat
41202713LOC120094633uncharacterized LOC12009463391336545413368597Rat
41204078LOC120094829reticulocalbin-1-like929460592947361Rat
41282109LOC120094598uncharacterized LOC120094598916455991648694Rat
41139014LOC120094786uncharacterized LOC12009478691460636014613169Rat
41204456LOC12009464760S ribosomal protein L19-like92292760822932930Rat
41205098LOC120094876U7 small nuclear RNA93481841034818473Rat
41381625LOC120094603derlin-1-like926982822699629Rat
41113996LOC120094785uncharacterized LOC12009478591460058414622471Rat
41114033LOC120094663uncharacterized LOC12009466393692366936928337Rat
41251599LOC120094867U6 spliceosomal RNA91469494714695052Rat
41279270LOC120094831F-box/WD repeat-containing protein 2-like983940838398728Rat
41285703LOC120094630uncharacterized LOC12009463091157517911591773Rat
41358524LOC120094643non-histone chromosomal protein HMG-14-like91998089919983335Rat
41090475LOC120094612uncharacterized LOC120094612928157832839679Rat
41116177LOC120094792uncharacterized LOC12009479291574755815751915Rat
41280595LOC120094655uncharacterized LOC12009465593084836330925836Rat
41286286LOC120094607uncharacterized LOC120094607926796342683539Rat
41327487LOC120094868U6 spliceosomal RNA92317884423178936Rat
41116623LOC120094640uncharacterized LOC12009464091743427317459213Rat
41117169LOC120094931small nucleolar RNA SNORA1793353951733539639Rat
41327919LOC120094657uncharacterized LOC12009465793177815331826103Rat
41388092LOC12009483540S ribosomal protein S18-like93604717836048807Rat
41148042LOC120094654uncharacterized LOC12009465492906174329088506Rat
41148077LOC120094642uncharacterized LOC12009464291988249019909177Rat
41174992LOC120094861U6 spliceosomal RNA92369826123698371Rat
41389612LOC120094832ERC protein 2-like91005061210051922Rat
41390282LOC120094619uncharacterized LOC120094619930975823106904Rat
41119832LOC120094916U1 spliceosomal RNA93707511237075272Rat
41262561LOC120094978U6 spliceosomal RNA92866414928664255Rat
41331243LOC12009465260S ribosomal protein L29-like92617586926176521Rat
41178156LOC120094869U6 spliceosomal RNA93391259533912698Rat
41188929LOC120094859U6 spliceosomal RNA91389540213895505Rat
41263247LOC120094658uncharacterized LOC12009465893319276933212691Rat
41342146LOC120094615uncharacterized LOC120094615930091093017536Rat
41343382LOC120094641ATP synthase subunit g, mitochondrial-like91776067617760986Rat
41366852LOC120094941small nucleolar RNA SNORA1792887119028871294Rat
41154104LOC120094836RCC1 and BTB domain-containing protein 1-like93677613336790749Rat
41179785LOC120094634uncharacterized LOC12009463491341234313489689Rat
41213696LOC120094875U7 small nuclear RNA917514281751490Rat
41215231LOC120094599BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like917880411788770Rat
41343656LOC120094968U4 spliceosomal RNA91738830217388446Rat
41156720LOC120094830reticulocalbin-1-like930854493087638Rat
41156996LOC120094610derlin-1-like929538292955222Rat
41216390LOC120094920small nucleolar RNA SNORA1792152044521520572Rat
41266739LOC120094624uncharacterized LOC120094624959646216246324Rat
41344989LOC120094629uncharacterized LOC12009462991011964410122398Rat
41370247LOC120094780NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1-like935950303595591Rat
41102534LOC120094893small nucleolar RNA SNORA5193674634636746464Rat
41102627LOC120094892small nucleolar RNA SNORA3891458028514580409Rat
41183083LOC120094595N-alpha-acetyltransferase 11-like9412259412903Rat
41269133LOC120094617derlin-1-like930711233072058Rat
41290159LOC120094594thioredoxin-like protein 4A9411736412204Rat
41290364LOC120094862U6 spliceosomal RNA93796214137962247Rat
41291055LOC120094873U6 spliceosomal RNA91380992913810029Rat
41346670LOC120094661thymosin beta-10-like93683736136852737Rat
41372167LOC120094984U6 spliceosomal RNA91405162814051732Rat
41127923LOC120094887small nucleolar RNA SNORA36 family91572372115723851Rat
41158924LOC120094650uncharacterized LOC12009465092555150625649126Rat
41218959LOC120094631uncharacterized LOC12009463191181960811833871Rat
41219852LOC120094613partner of Y14 and mago-like928200412822123Rat
41372763LOC12009478940S ribosomal protein S29-like91520739015209191Rat
41373830LOC120094821enhancer of rudimentary homolog92375303123753355Rat
41399553LOC120094882small nucleolar RNA SNORA70963843726384506Rat
41072519LOC12009462340S ribosomal protein S17-like958984675905781Rat
41161618LOC120094889small nucleolar RNA SNORA44942814814281609Rat
41293219LOC120094597uncharacterized LOC1200945979967985982682Rat
41293541LOC120094605uncharacterized LOC120094605927234222732885Rat
41349498LOC120094635uncharacterized LOC12009463591582535615830665Rat
41106882LOC120094874U7 small nuclear RNA92131650421316566Rat
41107238LOC120094913small nucleolar RNA SNORA1793733515037335272Rat
41198719LOC120094616poly(rC)-binding protein 4-like930922003093599Rat
41272310LOC120094841uncharacterized LOC12009484191779406017801338Rat
41402348LOC120094604uncharacterized LOC120094604926188462636236Rat
41403358LOC120094907small nucleolar RNA SNORA48966078666608000Rat
41131560LOC120094645ubiquitin-like92066143520662315Rat
41295786LOC120094632uncharacterized LOC12009463291241647712417396Rat
41320429LOC120093086sulfotransferase 1C2-like969626047131268Rat
41352668LOC120094609poly(rC)-binding protein 4-like930219733022989Rat
41376792LOC120094596uncharacterized LOC1200945969413570429904Rat
41377098LOC120094791uncharacterized LOC12009479191537192415379019Rat
41403460LOC120094638uncharacterized LOC12009463891672272016737939Rat
41133997LOC120094790uncharacterized LOC12009479091525979315270773Rat
41012750LOC120094636uncharacterized LOC12009463691657019416589380Rat
40926384LOC120094787uncharacterized LOC12009478791515706215160395Rat
40926438LOC120094981U6 spliceosomal RNA91358758613587697Rat
40953770LOC120094625uncharacterized LOC120094625969564486962274Rat
40978192LOC120094614partner of Y14 and mago-like929782272980291Rat
40955717LOC120094934small nucleolar RNA SNORA1793085867830858801Rat
40979134LOC120094879U7 small nuclear RNA92131665421316712Rat
40980684LOC120094937small nucleolar RNA SNORA1792333872223338803Rat
40981102LOC120094948U1 spliceosomal RNA957772475777398Rat
40999450LOC120094644uncharacterized LOC12009464492046236620468036Rat
40929597NEWGENE_6576114transfer RNA threonine (anticodon AGU)91839905618399136Rat
40982266LOC120094834SUMO-conjugating enzyme UBC9-like93598239035984367Rat
40932165LOC120094656uncharacterized LOC12009465693124350231265028Rat
41005958LOC120094637uncharacterized LOC12009463791674266316765020Rat
40935681LOC120094870U6 spliceosomal RNA996740979674202Rat
40987508LOC120094828poly(rC)-binding protein 4-like929397372940705Rat
40988429LOC120094938U1 spliceosomal RNA91170829711708457Rat
40964348LOC120094962U2 spliceosomal RNA92765647227656615Rat
41009526LOC120094606uncharacterized LOC120094606927856782793791Rat
41010004LOC120094620partner of Y14 and mago-like930459143047929Rat
40940879LOC120094884U1 spliceosomal RNA919317161931879Rat
40995448LOC120094788uncharacterized LOC12009478891518871815190122Rat
41046919LOC120094621uncharacterized LOC120094621932419683264057Rat
41242603LOC120094662uncharacterized LOC12009466293703746337047132Rat
41024372LOC120094608partner of Y14 and mago-like926297702630658Rat
41050827LOC120094784uncharacterized LOC12009478491442431014426287Rat
41315728LOC120094781uncharacterized LOC120094781934575883489539Rat
41079714LOC120094900small nucleolar RNA SNORA489756175756311Rat
41030316LOC120094626reticulocalbin-1-like91012449810125726Rat
41255155LOC120094600poly(rC)-binding protein 4-like927798932781482Rat
41333059LOC120094922small nucleolar RNA SNORA1793733552637335650Rat
41053828LOC120094840uncharacterized LOC12009484091774401517747544Rat
41143660LOC120094838heterogeneous nuclear ribonucleoprotein D-like987123408713866Rat
41255525LOC120094653uncharacterized LOC12009465392814930428154124Rat
41256487LOC120094864U6 spliceosomal RNA910807461080852Rat
41055680LOC120094628uncharacterized LOC12009462891009974910105086Rat
41144581NEWGENE_40938314transfer RNA serine (anticodon AGA)964455866445666Rat
41151456LOC120094940small nucleolar RNA SNORA1792326215223262285Rat
41057302LOC120094866U6 spliceosomal RNA92973260929732713Rat
41057709LOC120094649uncharacterized LOC12009464992559278325615957Rat
41220628LOC120094639uncharacterized LOC12009463991725419617257745Rat
41297475LOC120094927U1 spliceosomal RNA92058290620583063Rat
41297969LOC120094611uncharacterized LOC120094611929739022992547Rat
41031628LOC120094909small nucleolar RNA SNORA1791238394412384075Rat
41032701LOC120094842uncharacterized LOC12009484292054784420555930Rat
41059212LOC120094651E3 ubiquitin-protein ligase RBX1-like92576451325773891Rat
41298228LOC120094618uncharacterized LOC120094618931157533129689Rat
41298242LOC120093071uncharacterized LOC120093071930294263052318Rat
41314784LOC120093147rho GTPase-activating protein 20-like9350679356712Rat
41061308LOC120094622uncharacterized LOC120094622932296813242765Rat
41062037LOC120094908small nucleolar RNA SNORA4893364748933647629Rat
41227410LOC120094898U11 spliceosomal RNA92856277828562911Rat
41017258LOC120094982U6 spliceosomal RNA93029237930292485Rat
41039806LOC12009483360S ribosomal protein L10a-like92578826125791426Rat
41040372LOC120094783uncharacterized LOC120094783936973513706053Rat
41065030LOC120094660uncharacterized LOC12009466093664695436649913Rat
41065341LOC120093043small nucleolar RNA SNORA1991420347414203604Rat
41041357LOC120094627reticulocalbin-1-like91006702710067832Rat
41041708LOC120094601derlin-1-like926532082655994Rat
41042201LOC120094965U4 spliceosomal RNA92844600728446144Rat
41237504Capscalcyphosine915445971545631Rat
41044195LOC120094935small nucleolar RNA SNORA1792569842425698531Rat
41069681LOC120094793uncharacterized LOC12009479391624432516245932Rat
41022215LOC120094839uncharacterized LOC12009483991285926412864171Rat
41240384LOC120094843uncharacterized LOC12009484392588909425898507Rat
41309300LOC120094648uncharacterized LOC12009464892308610723099478Rat
41309604LOC120094659uncharacterized LOC12009465993604918836050156Rat
41309847LOC120094602derlin-1-like927596502761098Rat
41309930LOC120094646uncharacterized LOC12009464692070335220714779Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10252D7Mit1213693513366635133728Ratregion
10252D7Mit1213691077552010775580Ratregion
10873D9Uwm310191455455514554654Ratregion
34090D9Mgh822393684038536840608Ratregion
34264D9Mgh5150958577835857951Ratregion
34286D9Mgh614393145248931452632Ratregion
33583D9Mit927192315912623159388Ratregion
36063D9Rat3717191588777915887950Ratregion
36151D9Rat4616991076977510769932Ratregion
36157D9Rat3116292121837921218540Ratregion
37416D9Rat7019092526804425268236Ratregion
37468D9Rat162233933686523368873Ratregion
37472D9Rat8724291868264518682873Ratregion
35336D9Rat3928891563800415638292Ratregion
35437D9Rat3815191590616415906328Ratregion
35439D9Rat3514591722047617220609Ratregion
36984D9Rat2912992566118825661317Ratregion
37604D9Rat7622893696235936962591Ratregion
37634D9Rat7921591420956414209783Ratregion
37692D9Rat8221691131173811311958Ratregion
37776D9Rat8820991112370211123900Ratregion
37846D9Rat9424593428774534287990Ratregion
36510D9Rat409291401384014013932Ratregion
36707D9Rat3216091975163419751792Ratregion
34963D9Rat3415391836330118363454Ratregion
35104D9Rat16013291518425015184382Ratregion
35164D9Rat5617693441125234411424Ratregion
35623D9Rat4113391353377013533896Ratregion
35695D9Rat44176951098265109995Ratregion
35733D9Rat45158942953494295513Ratregion
35871D9Rat3614791696139816961545Ratregion
39890D9Rat19322191711170917111930Ratregion
39964D9Rat15022493669731836697542Ratregion
38274D9Rat5821593691945736919672Ratregion
38320D9Rat6619991704407517044281Ratregion
40738D9Rat13014092375402423754144Ratregion
38684D9Rat7823391700715217007395Ratregion
38764D9Rat8111291487536514875477Ratregion
40022D9Rat15217492213332222133488Ratregion
40170D9Rat13513591176556411765695Ratregion
40282D9Rat15112593344993933450064Ratregion
39024D9Rat5922593598952735989754Ratregion
39400D9Rat12820992554906825549279Ratregion
41928D9Rat3328691867069618670972Ratregion
42879D9Rat18120691751034817510538Ratregion
42880D9Rat18220091718628417186488Ratregion
42884D9Rat18024492411676224116997Ratregion
42884D9Rat18024492411607824116997Ratregion
42885D9Rat15715593742213437422299Ratregion
41218D9Rat13413091345703913457174Ratregion
41272D9Rat139137958596955859822Ratregion
41490D9Rat138167985680328568177Ratregion
40894D9Rat13324991463350614633755Ratregion
41556D9Rat13216091549913615499288Ratregion
41772D9Rat15824692753206327532335Ratregion
41890D9Rat19114893650327336503422Ratregion
43124D18Rat12224291957244019572673Ratregion
44547D9Got2615691758455117584707Ratregion
44549D9Got1511591173586111735976Ratregion
44550D9Got1226491102999111030254Ratregion
44551D9Got1440191184997111850371Ratregion
44553D9Got1615191338053513380686Ratregion
44555D9Got14024391364766013648039Ratregion
44555D9Got14024391364766013647903Ratregion
44556D9Got1818191505138115051562Ratregion
44557D9Got1717491538092615381100Ratregion
44558D9Hmgc122891647065216470878Ratregion
44559D9Got2212991666525216665381Ratregion
44560D9Got2324691756517617565422Ratregion
44561D9Got2521491784387917844093Ratregion
44562D9Got2016491730445817304622Ratregion
44563D9Got2117891766435817664536Ratregion
44564D9Got2717691875150418751680Ratregion
44565D9Got2816392191746021917623Ratregion
44566D9Got2919492236594722366141Ratregion
44567D9Wox1915692207116922071345Ratregion
44568D9Wox1620092219877322198945Ratregion
44569D9Got3024092291126422911504Ratregion
44570D9Got3123592429783724298072Ratregion
44571D9Got3215592354096823541123Ratregion
44573D9Got3315292351340323513555Ratregion
44574D9Got3519492550878925508983Ratregion
44576D9Got3916092847733428477539Ratregion
44576D9Got3916092847733428477492Ratregion
44577D9Got13127792636615726366431Ratregion
44578D9Got13025492701316827013422Ratregion
44580D9Got4016292725818127258343Ratregion
44581D9Got3826893148113931481407Ratregion
44582D9Got4312693150332431503450Ratregion
44583D9Got4521993210876432108981Ratregion
44585D9Got4115193222586932226020Ratregion
44586D9Got13219193301164133011832Ratregion
44587D9Got4614093686577336865913Ratregion
60643D9Got10173976083627608534Ratregion
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5500414REN5958323691297041612970652Ratregion
5500416REN5959524091297311212973352Ratregion
5500418REN5982725291303250213032754Ratregion
5500420REN5999425491307481213075066Ratregion
5500422REN6051524791319949513199742Ratregion
5500450AW184596286975018637502149Ratregion
5500649RH136456190965116546511844Ratregion
5503436stSG63486098491310355213104536Ratregion
5500897D4S157952291096758210968104Ratregion
5505227Safb1304914302831431587Ratregion
5501742MARC_10377-10378:999102157:1147591477488414776359Ratregion
5506575VEGF_112782491496919014970014Ratregion
5506583AW46451710392555624825556351Ratregion
5501870MARC_16413-16414:1018631384:10914311961431698Ratregion
5501870MARC_16413-16414:1018631384:10914086921409275Ratregion
5501886MARC_16785-16786:1033500245:365091433079814331448Ratregion
5502022MARC_24021-24022:1029778648:1606919185431919149Ratregion
5502086MARC_3939-3940:996679197:321792323455523235166Ratregion
5502106MARC_4447-4448:966894303:1182910019131003230Ratregion
5502447RH1248918791431930814319395Ratregion
55027409STS0113993297052732970666Ratregion
5502975Tcfap2b47992181144221811921Ratregion
5502353RH12456518192555636125556542Ratregion
5502371RH124646187917312491731436Ratregion
Position Markers

Peak: (D9Rat132)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2915,499,136 - 15,499,288 (+)MAPPER
Rnor_6.0917,883,799 - 17,883,946NCBI
Rnor_5.0916,772,634 - 16,772,781UniSTS
RGSC_v3.4911,099,462 - 11,099,609UniSTS
RGSC_v3.4911,099,461 - 11,099,609RGD
RGSC_v3.1911,096,784 - 11,096,931RGD
Celera913,242,291 - 13,242,438UniSTS
RH 3.4 Map978.1UniSTS
RH 3.4 Map978.1RGD
RH 2.0 Map974.1RGD
SHRSP x BN Map914.0098RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
631533Iresp3Immunoglobin response QTL316.2blood immunoglobulin E amount (VT:0002492)serum total immunoglobulin E level (CMO:0001542)927457995857951Rat
1578675Bss17Bone structure and strength QTL 173.8femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)9336865213533896Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
724543Cm20Cardiac mass QTL 203.9heart mass (VT:0007028)calculated heart weight (CMO:0000073)91696139840594091Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)92213332249968732Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 11.1-28.5 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females 8694157
qtl_general measurement method: at the end of the HPA axis function experiment, body weight was taken; subcutaneous fat was removed and weighed and percentage was calculated 8694157
qtl_general software package used: MultiQTL software 8694157