Gene: Sema3c (semaphorin 3C) Rattus norvegicus
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Symbol: Sema3c
Name: semaphorin 3C
Description: ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); blood vessel remodeling (ortholog); cardiac endothelial to mesenchymal transition (ortholog); ASSOCIATED WITH Persistent Truncus Arteriosus (ortholog); pleomorphic xanthoastrocytoma (ortholog); rheumatoid arthritis (ortholog); FOUND IN extracellular space (ortholog); INTERACTS WITH 17beta-estradiol; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296787; MGC189535; sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; semaphorin-3C
Orthologs:
Homo sapiens (human) : SEMA3C (semaphorin 3C)  HGNC  Alliance
Mus musculus (house mouse) : Sema3c (sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema3c (semaphorin 3C)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA3C (semaphorin 3C)
Canis lupus familiaris (dog) : SEMA3C (semaphorin 3C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sema3c (semaphorin 3C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0414,318,276 - 14,490,438 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0414,293,370 - 14,301,988 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0414,315,785 - 14,464,552 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4413,739,659 - 13,914,636 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1413,742,156 - 13,940,776 (-)NCBI
Celera413,120,876 - 13,281,356 (-)NCBICelera
Cytogenetic Map4q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sema3c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309343
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE