Cxadr (CXADR, Ig-like cell adhesion molecule)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Cxadr (CXADR, Ig-like cell adhesion molecule) Rattus norvegicus

Analyze

Symbol:

Cxadr

Name:

CXADR, Ig-like cell adhesion molecule

RGD ID:

619794

Description:

Predicted to enable several functions, including PDZ domain binding activity; beta-catenin binding activity; and connexin binding activity. Predicted to be involved in several processes, including AV node cell-bundle of His cell adhesion involved in cell communication; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules; and neutrophil chemotaxis. Predicted to act upstream of or within negative regulation of cardiac muscle cell proliferation. Located in bicellular tight junction and neuron projection. Orthologous to human CXADR (CXADR Ig-like cell adhesion molecule); PARTICIPATES IN myocarditis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CAR; Car1; coxsackie virus and adenovirus receptor; coxsackievirus and adenovirus receptor homolog; MGC109536; rCAR

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	11	16,982,752 - 17,030,078 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	16,982,860 - 17,030,046 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	25,620,930 - 25,668,242 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	11	18,350,955 - 18,398,261 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	11	17,511,443 - 17,559,008 (+)	NCBI	Rnor_WKY
Rnor_6.0	11	16,826,269 - 16,873,564 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	16,826,399 - 16,873,562 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	20,480,930 - 20,528,211 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	17,193,505 - 17,241,549 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	17,193,575 - 17,227,857 (+)	NCBI
Celera	11	16,973,781 - 17,020,940 (+)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

Experimental Liver Cirrhosis (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,6-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

4,4'-diaminodiphenylmethane (EXP)

4-hydroxyphenyl retinamide (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

bosentan (ISO)

butanal (ISO)

butyric acid (ISO)

cadmium dichloride (EXP)

caffeine (ISO)

calcitriol (ISO)

choline (ISO)

ciguatoxin CTX1B (ISO)

clofibrate (ISO)

clothianidin (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

dibutyl phthalate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

enniatin (EXP)

epoxiconazole (ISO)

folic acid (ISO)

fulvestrant (ISO)

genistein (ISO)

gentamycin (EXP)

ivermectin (ISO)

L-methionine (ISO)

lipopolysaccharide (ISO)

methapyrilene (EXP)

mifepristone (EXP)

mitoxantrone (ISO)

N-methylformamide (ISO)

N-nitrosodiethylamine (EXP,ISO)

nickel dichloride (ISO)

nickel sulfate (ISO)

nitrofen (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

pirinixic acid (ISO)

potassium iodide (EXP)

propiconazole (ISO)

rac-lactic acid (ISO)

raloxifene (ISO)

rimonabant (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium dichromate (EXP)

sunitinib (ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

torcetrapib (ISO)

trichostatin A (ISO)

triphenyl phosphate (EXP)

valproic acid (EXP,ISO)

valsartan (ISO)

vancomycin (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton reorganization (ISO,ISS)

AV node cell to bundle of His cell communication (ISO,ISS)

AV node cell-bundle of His cell adhesion involved in cell communication (ISO)

cardiac muscle cell development (ISO,ISS)

cardiac muscle cell proliferation (ISO)

cell-cell adhesion (ISO)

cell-cell junction organization (ISO,ISS)

defense response to virus (ISO)

epithelial structure maintenance (ISO,ISS)

gamma-delta T cell activation (ISO,ISS)

germ cell migration (ISO,ISS)

heart development (ISO,ISS)

heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ISO,ISS)

homotypic cell-cell adhesion (IBA,ISO,ISS)

mitochondrion organization (ISO,ISS)

negative regulation of cardiac muscle cell proliferation (ISO)

neutrophil chemotaxis (ISO,ISS)

regulation of AV node cell action potential (ISO)

transepithelial transport (ISO)

Cellular Component

acrosomal vesicle (ISO,ISS)

adherens junction (ISO,ISS)

apicolateral plasma membrane (ISO,ISS)

basolateral plasma membrane (IBA,ISO)

bicellular tight junction (IBA,IDA,ISO)

cell body (ISO,ISS)

cell junction (ISO)

cell-cell junction (ISO)

cytoplasm (ISO,ISS)

extracellular space (ISO)

filopodium (ISO,ISS)

growth cone (ISO,ISS)

intercalated disc (IBA,ISO)

membrane raft (ISO,ISS)

neuromuscular junction (ISO)

neuron projection (IDA,ISO)

nucleoplasm (IEA,ISO)

nucleus (ISS)

plasma membrane (ISO,ISS)

protein-containing complex (ISO)

Molecular Function

beta-catenin binding (ISO,ISS)

cell adhesion molecule binding (IBA,ISO,ISS)

connexin binding (ISO,ISS)

identical protein binding (ISO)

integrin binding (ISO)

PDZ domain binding (ISO,ISS)

protein binding (ISO)

signaling receptor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

myocarditis pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Expression of coxsackie adenovirus receptor and alphav-integrin does not correlate with adenovector targeting in vivo indicating anatomical vector barriers.	Fechner H, etal., Gene Ther 1999 Sep;6(9):1520-35.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Coxsackievirus and adenovirus receptor, a tight junction membrane protein, is expressed in glomerular podocytes in the kidney.	Nagai M, etal., Lab Invest 2003 Jun;83(6):901-11.
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	CAR-associated vesicular transport of an adenovirus in motor neuron axons.	Salinas S, etal., PLoS Pathog. 2009 May;5(5):e1000442. doi: 10.1371/journal.ppat.1000442. Epub 2009 May 22.
10.	Podocin participates in the assembly of tight junctions between foot processes in nephrotic podocytes.	Shono A, etal., J Am Soc Nephrol. 2007 Sep;18(9):2525-33. Epub 2007 Aug 5.

Additional References at PubMed

PMID:9096397	PMID:10814828	PMID:11316797	PMID:11734628	PMID:12297051	PMID:12477932	PMID:12869515	PMID:14624362	PMID:14978041	PMID:15057822	PMID:15304526	PMID:15364909
PMID:15489334	PMID:15533241	PMID:15800062	PMID:15864812	PMID:16079292	PMID:16410001	PMID:16543498	PMID:16678988	PMID:16780588	PMID:17359973	PMID:17538635	PMID:17690169
PMID:18205224	PMID:18636119	PMID:20235596	PMID:20361046	PMID:20813954	PMID:21269662	PMID:22003382	PMID:22875787	PMID:24057874	PMID:25468996	PMID:25497012

Genomics

Comparative Map Data

Cxadr
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	11	16,982,752 - 17,030,078 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	16,982,860 - 17,030,046 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	25,620,930 - 25,668,242 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	11	18,350,955 - 18,398,261 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	11	17,511,443 - 17,559,008 (+)	NCBI	Rnor_WKY
Rnor_6.0	11	16,826,269 - 16,873,564 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	16,826,399 - 16,873,562 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	20,480,930 - 20,528,211 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	17,193,505 - 17,241,549 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	17,193,575 - 17,227,857 (+)	NCBI
Celera	11	16,973,781 - 17,020,940 (+)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

CXADR
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	17,513,043 - 17,636,262 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	21	17,513,043 - 17,593,579 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	18,885,361 - 18,965,928 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	17,807,201 - 17,861,147 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	17,807,200 - 17,861,135	NCBI
Celera	21	4,060,105 - 4,114,040 (+)	NCBI		Celera
Cytogenetic Map	21	q21.1	NCBI
HuRef	21	4,271,028 - 4,351,637 (+)	NCBI		HuRef
CHM1_1	21	18,445,887 - 18,526,468 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	21	15,868,092 - 15,948,630 (+)	NCBI		T2T-CHM13v2.0

Cxadr
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	78,098,114 - 78,156,673 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	78,098,377 - 78,156,662 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	78,301,226 - 78,359,785 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	78,301,489 - 78,359,774 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	78,301,936 - 78,360,030 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	78,184,283 - 78,223,344 (+)	NCBI		MGSCv36	mm8
Celera	16	78,531,603 - 78,582,585 (+)	NCBI		Celera
Cytogenetic Map	16	C3.1	NCBI

Cxadr
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	18,867,797 - 18,907,331 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	18,894,853 - 18,927,129 (+)	NCBI	ChiLan1.0	ChiLan1.0

CXADR
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	21	17,637,510 - 17,693,324 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	17,636,952 - 17,693,324 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	21	4,246,779 - 4,367,369 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

CXADR
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	14,021,292 - 14,079,049 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	14,021,303 - 14,078,847 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	14,040,422 - 14,099,214 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	14,054,721 - 14,113,513 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	14,055,183 - 14,113,306 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	14,057,180 - 14,115,931 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	14,060,916 - 14,121,453 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	14,461,638 - 14,520,275 (+)	NCBI		UU_Cfam_GSD_1.0

Cxadr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	15,051,698 - 15,094,341 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936505	9,971,118 - 10,032,238 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936505	9,971,393 - 10,032,238 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CXADR
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	182,134,566 - 182,185,950 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	182,134,416 - 182,185,977 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	192,284,884 - 192,305,700 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CXADR
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	75,027,499 - 75,078,206 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	75,001,562 - 75,078,033 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	78,908,252 - 78,986,846 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cxadr
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	5,900,886 - 5,958,765 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	5,900,933 - 5,954,584 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cxadr
368 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	56
Count of miRNA genes:	47
Interacting mature miRNAs:	52
Transcripts:	ENSRNOT00000050701
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
634341	Bw121	Body weight QTL 121	3.56		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	11	1	21836709	Rat
1598842	Glom10	Glomerulus QTL 10	3.4		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	1	35331169	Rat
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	1041931	66113562	Rat
1641927	Alcrsp10	Alcohol response QTL 10			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	11	8436674	53436674	Rat
2290451	Scl58	Serum cholesterol level QTL 58	3.48		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	11	12831046	25121472	Rat
724517	Uae18	Urinary albumin excretion QTL 18	3.7		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	16472047	44285911	Rat

Markers in Region

RH137702

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	17,020,309 - 17,020,525 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	16,863,796 - 16,864,011	NCBI	Rnor6.0
Rnor_5.0	11	20,518,443 - 20,518,658	UniSTS	Rnor5.0
RGSC_v3.4	11	17,231,781 - 17,231,996	UniSTS	RGSC3.4
Celera	11	17,011,172 - 17,011,387	UniSTS
RH 3.4 Map	11	65.2	UniSTS
Cytogenetic Map	11	q11	UniSTS

AU049654

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	17,014,818 - 17,014,969 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	16,858,308 - 16,858,458	NCBI	Rnor6.0
Rnor_5.0	11	20,512,955 - 20,513,105	UniSTS	Rnor5.0
RGSC_v3.4	11	17,226,292 - 17,226,442	UniSTS	RGSC3.4
Celera	11	17,005,683 - 17,005,833	UniSTS
Cytogenetic Map	11	q11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	2	39	37	37	4	37			74	34	33	11
Low	1	4	20	4	15	4	8	10		1	8		8
Below cutoff								1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001399207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_053570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF109643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF109644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC088313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000050701 ⟹ ENSRNOP00000041873

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	16,982,860 - 17,030,046 (+)	Ensembl
Rnor_6.0 Ensembl	11	16,826,399 - 16,873,562 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000094570 ⟹ ENSRNOP00000091602

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	16,982,860 - 17,009,467 (+)	Ensembl

RefSeq Acc Id:

NM_053570 ⟹ NP_446022

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	16,982,913 - 17,030,078 (+)	NCBI
Rnor_6.0	11	16,826,399 - 16,873,564 (+)	NCBI
Rnor_5.0	11	20,480,930 - 20,528,211 (+)	NCBI
RGSC_v3.4	11	17,193,505 - 17,241,549 (+)	RGD
Celera	11	16,973,781 - 17,020,940 (+)	RGD

Sequence:

show sequence

CCAGGCTCTGGAAAAAGCAGGGCTACCCGAGCTGAGAGCGTTTACCTGCAAGCTACGGCCCGGC
AGCTCCCATGGCGCTCCTACTGTGCTTCGTGCTCCTGTGCGGTGTCGCGGATTTCACCAGCAGT
TTGAGTATCACTACACCTGAACAGAGGATCGAAAAAGCTAAAGGGGAAACTGCCTATCTACCCT
GCAAGTTTACTCTTGAACCCGAAGACCAGGGACCACTGGACATTGAATGGCTGATATCCCCGTC
CGATAACCAGAAAGTGGATCAAGTGATCATTTTGTATTCTGGAGACAAAATTTATGATAACTAC
TATCCGGATCTGAAAGGACGAGTACACTTTACGAGTAACGACGTCAAGTCTGGTGACGCATCGA
TAAATGTGACCAATCTGCAGTTGTCCGATATTGGCACTTACCAGTGCAAAGTGAAGAAAGCTCC
TGGGGTTGCAAATAGAAAATTTCTGCTGACAGTTCTTGTTAAGCCTTCAGGTACAAGGTGCTTC
GTGGATGGCTCGGGAGAGATTGGAAATGACTTCAAGCTAAAGTGTGAACCCAAAGAAGGTTCCC
TCCCACTGCAGTATGAATGGCAGAAATTGTCAGATTCCCAGAAAATGCCTACTCCATGGCTAGC
AGAAATGACTTCACCGGTTATATCTGTGAAAAATGCCAGTTCTGAGTATTCTGGGACCTACAGT
TGCACAGTCCAAAACAGAGTGGGCTCTGATCAGTGTATGCTACGACTAGATGTTGTCCCTCCCT
CCAACAGAGCTGGAACGATCGCGGGAGCTGTCATAGGGACGCTGCTTGCCCTTGTGCTCATCGG
GGCCATCCTCTTCTGCTGTCATAAAAAACGCAGAGAAGAGAAGTACGAGAAGGAAGTGCATCAC
GACATCAGGGAAGATGTGCCTCCTCCGAAGAGTCGGACATCCACCGCCAGGAGCTACATCGGCA
GCAACCATTCCTCCCTGGGGTCCATGTCCCCTTCCAACATGGAAGGGTATTCCAAGACCCAGTA
TAACCAAGTCCCCAGTGAAGACTTTGAACGTGCTCCTCAGAGTCCGACTCTGGCACCCGCTAAG
TTCAAGTACGCTTACCTGACCGATGGCATTGCAGTGGTATAAATATGAAGGACTACTGAAGAAT
CTCAAGTTCCATACTCCTTCCTTTAGAACTTTACTAGACTAATGCTGTTTTGAAAAAGTACAGC
ACTTCTTTCGTTTTTCATTTTTGAGCTAGGACATCACCTTGCCCTGGTCAGCATCAAAGCTGAC
ACACAGCTGAGGAGCCCTGGGATCCTGTTGTCTGCCTCAGCCTCAAATTATGGGATTTCAGGAA
CTCCCACTACACCCAGTTTACAGCAGCTACAGGAGCACTTCTGCTTTCTTTAATGGCAGAAGGC
AAGTATGTCAGATATCCTATAAAATGATTTTGGGTCAAAATCATGGTGACAAAGGTCCCATTTA
TACTGACTTTGATAGCTGAAAGGTTTTTTTGTTGTATTTATATTTTCAATTAGCTACTGCCAGT
AAATTAAAATTTTTTACATGTATATTTTGATATGTGGCCTTTGGGGGAATCCCGTGTTCAATAA
AGTTTTTTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006248000 ⟹ XP_006248062

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	11	16,982,752 - 17,020,626 (+)	NCBI
Rnor_6.0	11	16,826,269 - 16,864,106 (+)	NCBI
Rnor_5.0	11	20,480,930 - 20,528,211 (+)	NCBI

Sequence:

show sequence

AGGGCGCCAACACTGTGGGCTCCTTGGGGCTCCCGATTGCTGCCGGAAGTGACGCGTTCACCTG
CCGAGCTGGGGCGGGGCGCAGAGGTGCCTTCGCTGCTGCCACCGCCGGGAGCCAGTCGGGAGTG
TACCAGGCTCTGGAAAAAGCAGGGCTACCCGAGCTGAGAGCGTTTACCTGCAAGCTACGGCCCG
GCAGCTCCCATGGCGCTCCTACTGTGCTTCGTGCTCCTGTGCGGTGTCGCGGATTTCACCAGCA
GTTTGAGTATCACTACACCTGAACAGAGGATCGAAAAAGCTAAAGGGGAAACTGCCTATCTACC
CTGCAAGTTTACTCTTGAACCCGAAGACCAGGGACCACTGGACATTGAATGGCTGATATCCCCG
TCCGATAACCAGAAAGTGGATCAAGTGATCATTTTGTATTCTGGAGACAAAATTTATGATAACT
ACTATCCGGATCTGAAAGGACGAGTACACTTTACGAGTAACGACGTCAAGTCTGGTGACGCATC
GATAAATGTGACCAATCTGCAGTTGTCCGATATTGGCACTTACCAGTGCAAAGTGAAGAAAGCT
CCTGGGGTTGCAAATAGAAAATTTCTGCTGACAGTTCTTGTTAAGCCTTCAGGTACAAGGTGCT
TCGTGGATGGCTCGGGAGAGATTGGAAATGACTTCAAGCTAAAGTGTGAACCCAAAGAAGGTTC
CCTCCCACTGCAGTATGAATGGCAGAAATTGTCAGATTCCCAGAAAATGCCTACTCCATGGCTA
GCAGAAATGACTTCACCGGTTATATCTGTGAAAAATGCCAGTTCTGAGTATTCTGGGACCTACA
GTTGCACAGTCCAAAACAGAGTGGGCTCTGATCAGTGTATGCTACGACTAGATGTTGTCCCTCC
CTCCAACAGAGCTGGAACGATCGCGGGAGCTGTCATAGGGACGCTGCTTGCCCTTGTGCTCATC
GGGGCCATCCTCTTCTGCTGTCATAAAAAACGCAGAGAAGAGAAGTACGAGAAGGAAGTGCATC
ACGACATCAGGGAAGATGTGCCTCCTCCGAAGAGTCGGACATCCACCGCCAGGAGCTACATCGG
CAGCAACCATTCCTCCCTGGGGTCCATGTCCCCTTCCAACATGGAAGGGTATTCCAAGACCCAG
TATAACCAAGTCCCCAGTGAAGACTTTGAACGTGCTCCTCAGAGTCCGACTCTGGCACCCGCTA
AGGTAGCTGCCCCTAATCTAAGTCGAATGGGAGCGGTTCCTGTGATGATCCCAGCACAGAGCAA
GGATGGGTCTATAGTATAGAATTCTGCACCTCTCTTCTCCGCTTTCCATGGTTCGATTCTTCTC
TTGACATATCAGTACTTATTCTAAATTTTGTTAACAGTAGCCCATGTATATGTATGTGTGTGTA
ATATGTGTAAGTATGTATACATACATACACATATATACATAAACACACACACACACACACACAC
ACACACACACACGTGAAGAAATTTATAAGGAACATGCTCCGTAAGAATTTTTGGTTATAGTAAA
TAATAAAGGCTGAAGAGTAATGACATTGACCAACTGGAAATTTTACCAAGTTGATTTCTAAGGG
CACCTAAACAATAATGCCCTTATATCCTGAGAAAGATATAGCACTTTGAGTATGATGTCATGGG
TCAAGAAATTTGTGAATTTACGGACGTACCAAGTTGATTCTTGAACCATCTGAAAACGATACTT
TGTAGTTCCTACCATTATTTGTAGGGTATCTGTCTCATTTATTTATGTCTCTCAAAAAGAAATC
CATGGAAAAACCTACTTAATGTAAGAATTTGTTTTTATAGTCTGAAGTGTATTCCATTATTTGT
AAGAGTAGGAGACCTGACAGTGTTTTAAAAATGCCTAGTTTTATTTCTAAGTCTTTCACGATCA
CTGATGACACGATTTCTTTTCTTTCTTTTTTTCTTTTGTTGTTTTGAGATTGGGCCTCAGTGTG
TTCGTTGCCTAGGCTGGCCTCAAATCATGATCCTCCTGCTTCAGCTTCTTGAATGCTGGGCTGA
CTAGTCTGTATCAGTTCCTTAAGTATTTAACCTAGAGACTACAGCAGCCACAGAAAGTAGTAAC
CTTTTGTGCACTACAAAAAGAAGCACCTTTCAGCTTCGGTAGCATTTGCCTCTGCTACACACAG
AGGTGAAACACTCGATGCTCCACGGGTCGGGGGAGGAAGAGGAGGAGGAGCGACGCGGAGGTCT
GCGCCTCGGGGCCTGTGGACCTCAGCAGAACTGACCAGGCAGAGTGGGAGTGCCAGGTTTATCA
GTCTGCAGCTAAACACTGGCCTTCTATTTTAGGTGATGTTTTTGCAATTGGGAAGGAAGGAAGG
AAACAAGGAAGGAAGGAGGTAGGGAAGGAAGGAAAACTGTTAATTCTCTTATCTGACAGTAATG
GATGAGAATTCTTAAATTATTTTTAAATTTGTGTTTTTGTTTTGTCGTAGACCGTACTGCATAG
TTTAAGTTATAGAAACATATAATCTAGACTTTTGATTTGGAGTGCGGTTCCTGGAGGCTATTTT
TCTCAGAGTCAATGAACAAATATATTTGAGGCAAGTTAAGTGTCTTCCACTAGTCCTGAATTCC
GGACTTGGGCAGTGTGCTTGGTGACCTGCGGCCAAACCTGCCTCCCTCTAGTGGTCAGAAATCA
AGTTTGAGTCTTAGTTTTGTGAAAGTGACTTACTCTTAAAAGAAATTTAAAAAGGAGTAAAGGG
AATACTCCTATCTGCCAAATGTATTAAATATAGTTTTCGTAGGAAAAAAAAAGTGAATTTATTG
TATATCCCTTAAGATTGTGAGGGAGTGTGTGTAGAGTGTAATGAGCCAGCATTTTCTTTATAGT
AGATAAGGTCTGTTATAAAAGATTTCATTAACTAACTACAAAGCCTTTCCCCTAGGGAACTGGT
CTCTGTTAATCTCTTCAGGTGCTGTGCTTGTAAATGCTACATTATAAATTAACGTTGGCATGCA
TTTACGGTTAGGCAGAATGTTGTGTATCCTTTTTAATGGTGAGTTTAAACCGAATGTCCATGTA
ATGGATTAGTGTACAGTTTTACATATTCGGAGGCATTTTTTAAAAGTAGGTTTAAACCTCACAT
AAAACTACTTTTTATATTTGTGTTGTTCTCATCTGTGCCTTTTTAGGTAATTTAATTTCTACAG
TGACTTTATGGTGCCTATGAGCTAGCTATCACCTACCTGAAAGGTGCTTAGAGGTGAGGGTACT
GTTTTCAAAAGCACATCACTGTGGCTCCCTTCTCCCCCGAGTCTCAGTCTTGCCTTTTCTCCTC
TGCTCTTTTTGATGTCACTTAAGCGATATCATTGTTTATTAGGATTGAAAAGACATTCACACCC
TCAGTACACTTTGGCCGTGTTTCTAGTTTATAACCATAGCCACGTTTGACTCTTAGATGTTTGG
CATTTTTATAAGATATTACAAGAATAAATTGGAATGTAGAGCTTAATGGTTTTTAGGTAATGAA
GAAGATGCTAGGTAGAAATTACTACAAAGGCAGATGTGTGGAATCTTTTCCTTTCCATAGACTT
TGTATTTATTGAAAGGCAAACAAAACCCAGAGTATCCAACTATCTTTAGTCCAGATTTGTAGCA
ACTATAATCTGAAAGAGAAACTTGTTTAAAAACAAACAAAACAAAACAAAACACTGTGAAAACC
AACAGGCCTGGAGGGTATACAATTAGCGACATAGTTAAATTTTAGGCTTTGGTCTGCAGCTCTT
CTCATTGAAGTCTCAGTTTACCCAAAGGTCAGACAAGTACTAGTAATTTCCCCAACAATTCTCA
CTGATTGTAGTTGAACCAGGGAGCAAGTATTTGCTCTAGAAGTCAACTAGTCAACAGCTCATGG
ACTTGGTTGGTGTAATCTTATCTAGAGATCCAGTTCAGGGCCAGCTCTGTCCTCACAGCAGAGG
TTTGGATCCCACTCTCTACGTGAGACTTAACACACATGTTAATGTTCCCCGGGGTAATCTGGAG
AGAAGTGCCACCACAGATTCCATAGTCTGTGTTCTGAATACAGAACAGCTATGAGTTTTATTAT
TATTGATAACCTCAGTAGCATTTTCCTGATCGAAAGCCTCCCCTGCTGCTCAGTCTGCTGTTGA
GTTCCATCATTCCCAGTTAAATAGACAAACACTTCCTTAACTTCGAGTTACCGACCAAGGATTT
GTTAGTATGGAAACACAGACCGAGTGTGTTTACTAGGAGAATCCATATAGATTATGGAGATGCC
TAGTTTCTGTTACATGTGACTGTGCACATGTATGATCCCAGAACTCACAGGCACAGGAAGATCA
TGGATTTGAGGCCAGTAGCCAGTTCAAAACAAGGCTGCACTGAGAGCTCCAAGACCTGGACATT
GACCTCATTAGTACAGTAATTTGACTGAGGTTTGACTCTAAGTTCTTTTAAGAAATGAACTTGA
GCCTGTGCCCTGGGGATTCGACTATGTGGAGAGGCAAGTGAACTTTTTGACTAACAAGAGCTCA
GTGCATGGAGTTGGCTGTTCTTTCCTGTGTGACTTATTAAATAACTACTGTCTCTGTGTACAGC
ATGTAAATTTGAAGCTATGTGAATGTTCGTAGGGTTCTGTTTTTTTCTAAAATATTTTCAACAG
TGTTTAGAGTGCTCTCAGCTGCCTTATTTCAGTGTGAACAGAAAATGTTCCTACTTTATGTGGT
GAATGCTTTAAATGTGTCACTTACAGAATAGTGTGTAGGAAAAGGCTGGCACAATTTTAAGTGG
TTTGCAACATTATTATATATGTACATATATGTTTATAACATTCTTGTGTTTCATAGTATAAATG
TTCAGGGCAAGTTTTAATATTTCAAATGCCTCTGGATATTCCAGCAATAAAGGCAAAATGTTCT
GCAGTCAAATTTCTCGTTTGCCTACTTTTGACACTAAAATAATCTGTATTTGAGCAAGGTTCCT
TTTGAAAATATTACAGAAAGAGGGAATAAATACATTTGTGAATTGTGGTTTTTTTCTCCTTTAG
GAAGGCCAGCCATTTGTTTACCTTCCAGAACTTGACCCTAAGCTCTAAGTTCAAGCTTAAAAAA
TATGTCCCAGTTTGTAATTTAGAGATAGAGGCCATCCGTTGAGCTTGGCATTTATTCAGACACT
AACAAGTCTGCCGAAGTTGAGCTTTGGGAGTTCTGCTAATTTGTCTAATGACACAGGTGCTAAG
AGAACCACAATTCACCAATTGACCTTTCTTGTTCCTAATTGTGAATTTTGGCAATAAACACAGT
TGTATTAAGAATACTAATTTGACACCCACATTTGCAAAGTATTGATAGTGTCAGTTTCAGATCT
TGTATTTCAGATATCTGGCTTACATACCCAACGATGCAGATTTTAAAGTTTGTAAGAACAACTT
TGTTTAAAAACAGAAACTTGCTCTTAGCTTTGTGACCGTGTACTTTTGAAATAAAACGAAGAAA
GTCGTC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001386136	(Get FASTA)	NCBI Sequence Viewer
	NP_446022	(Get FASTA)	NCBI Sequence Viewer
	XP_006248062	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF01254	(Get FASTA)	NCBI Sequence Viewer
	AAF01255	(Get FASTA)	NCBI Sequence Viewer
	AAH88313	(Get FASTA)	NCBI Sequence Viewer
	EDM10599	(Get FASTA)	NCBI Sequence Viewer
	EDM10600	(Get FASTA)	NCBI Sequence Viewer
	Q9R066	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_446022 ⟸ NM_053570
- Peptide Label:	precursor
- UniProtKB:	Q9R066 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MALLLCFVLLCGVADFTSSLSITTPEQRIEKAKGETAYLPCKFTLEPEDQGPLDIEWLISPSDN QKVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGV ANRKFLLTVLVKPSGTRCFVDGSGEIGNDFKLKCEPKEGSLPLQYEWQKLSDSQKMPTPWLAEM TSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAGTIAGAVIGTLLALVLIGAI LFCCHKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQ VPSEDFERAPQSPTLAPAKFKYAYLTDGIAVV hide sequence

RefSeq Acc Id:	XP_006248062 ⟸ XM_006248000
- Peptide Label:	isoform X1
- UniProtKB:	Q9R066 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MALLLCFVLLCGVADFTSSLSITTPEQRIEKAKGETAYLPCKFTLEPEDQGPLDIEWLISPSDN QKVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGV ANRKFLLTVLVKPSGTRCFVDGSGEIGNDFKLKCEPKEGSLPLQYEWQKLSDSQKMPTPWLAEM TSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPSNRAGTIAGAVIGTLLALVLIGAI LFCCHKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQ VPSEDFERAPQSPTLAPAKVAAPNLSRMGAVPVMIPAQSKDGSIV hide sequence

RefSeq Acc Id:

ENSRNOP00000041873 ⟸ ENSRNOT00000050701

RefSeq Acc Id:

ENSRNOP00000091602 ⟸ ENSRNOT00000094570

Protein Domains

Ig-like Ig-like C2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9R066-F1-model_v2	AlphaFold	Q9R066	1-365	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698007

Promoter ID:

EPDNEW_R8532

Type:

initiation region

Name:

Cxadr_1

Description:

CXADR, Ig-like cell adhesion molecule

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	16,826,386 - 16,826,446	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619794	AgrOrtholog
BioCyc Gene	G2FUF-22139	BioCyc
Ensembl Genes	ENSRNOG00000001557	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000041873	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOP00000091602.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000050701	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000094570.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7324723	IMAGE-MGC_LOAD
InterPro	Ig-like_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ig_sub	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/Swiss-Prot
	Ig_V-set	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Immunoglobulin	UniProtKB/Swiss-Prot
KEGG Report	rno:89843	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:109536	IMAGE-MGC_LOAD
NCBI Gene	89843	ENTREZGENE
Pfam	PF00047	UniProtKB/Swiss-Prot
	V-set	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Cxadr	PhenoGen
PROSITE	IG_LIKE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	IGc2	UniProtKB/Swiss-Prot
	IGv	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00409	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I6AST4_RAT	UniProtKB/TrEMBL
	CXAR_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q9R067	ENTREZGENE
UniProt Secondary	Q5M817	UniProtKB/Swiss-Prot
	Q9R067	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-05-05	Cxadr	CXADR, Ig-like cell adhesion molecule	Cxadr	coxsackie virus and adenovirus receptor	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	Cxadr	coxsackie virus and adenovirus receptor			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Cxadr	coxsackie virus and adenovirus receptor			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in podocytes and polarized epithelial cells	1299248
gene_function	may be a barrier for macromolecule and ion movement across membranes in polarized epithelial cells	1299248

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)