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Gene: Lix1l (limb and CNS expressed 1 like) Rattus norvegicus
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Symbol: Lix1l
Name: limb and CNS expressed 1 like
Description: Predicted to be involved in autophagosome maturation. Predicted to localize to the cytoplasm. Orthologous to human LIX1L (limb and CNS expressed 1 like); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Lix1 homolog (mouse)-like; Lix1 homolog-like; Lix1-like; LIX1-like protein; LOC499677; similar to Lix1 homolog (mouse) like
Orthologs:
Homo sapiens (human) : LIX1L (limb and CNS expressed 1 like)  HGNC  Alliance
Mus musculus (house mouse) : Lix1l (Lix1-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lix1l (limb and CNS expressed 1 like)
Pan paniscus (bonobo/pygmy chimpanzee) : LIX1L (limb and CNS expressed 1 like)
Canis lupus familiaris (dog) : LIX1L (limb and CNS expressed 1 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lix1l (limb and CNS expressed 1 like)
Sus scrofa (pig) : LIX1L (limb and CNS expressed 1 like)
Chlorocebus sabaeus (green monkey) : LIX1L (limb and CNS expressed 1 like)
Heterocephalus glaber (naked mole-rat) : Lix1l (limb and CNS expressed 1 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02198,726,110 - 198,751,987 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,726,118 - 198,751,985 (+)Ensembl
Rnor_5.02218,213,040 - 218,238,921 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42191,399,902 - 191,426,502 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2176,661,259 - 176,686,996 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lix1l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1593161
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.