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Gene: Pdlim4 (PDZ and LIM domain 4) Rattus norvegicus
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Symbol: Pdlim4
Name: PDZ and LIM domain 4
Description: Exhibits alpha-actinin binding activity. Involved in actin cytoskeleton organization; excitatory chemical synaptic transmission; and positive regulation of stress fiber assembly. Localizes to several cellular components, including the dendritic spine; endosome; and stress fiber. Human ortholog(s) of this gene implicated in osteoporosis. Orthologous to human PDLIM4 (PDZ and LIM domain 4); INTERACTS WITH 1,3,5-trinitro-1,3,5-triazinane; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: H-Rev18; LIM protein RIL; PDZ and LIM domain protein 4; reversion induced LIM; reversion induced LIM gene; reversion-induced LIM protein; Ril; RIT-18
Orthologs:
Homo sapiens (human) : PDLIM4 (PDZ and LIM domain 4)  HGNC  Alliance
Mus musculus (house mouse) : Pdlim4 (PDZ and LIM domain 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdlim4 (PDZ and LIM domain 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PDLIM4 (PDZ and LIM domain 4)
Canis lupus familiaris (dog) : PDLIM4 (PDZ and LIM domain 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdlim4 (PDZ and LIM domain 4)
Sus scrofa (pig) : PDLIM4 (PDZ and LIM domain 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01039,390,578 - 39,405,322 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01039,171,365 - 39,185,480 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1037,540,725 - 37,554,961 (-)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
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RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
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Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
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Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Pdlim4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3575
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.