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Gene: Snai1 (snail family transcriptional repressor 1) Rattus norvegicus
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Symbol: Snai1
Name: snail family transcriptional repressor 1
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; E-box binding activity; and kinase binding activity. Predicted to be involved in several processes, including animal organ development; negative regulation of response to DNA damage stimulus; and regulation of cellular biosynthetic process. Predicted to localize to the cytosol; nucleoplasm; and pericentric heterochromatin. Orthologous to human SNAI1 (snail family transcriptional repressor 1); INTERACTS WITH (R)-carnitine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Sna; snail family zinc finger 1; snail homolog; snail homolog 1; snail homolog 1 (Drosophila); snail homolog, (Drosophila); zinc finger protein SNAI1
Orthologs:
Homo sapiens (human) : SNAI1 (snail family transcriptional repressor 1)  HGNC  Alliance
Mus musculus (house mouse) : Snai1 (snail family zinc finger 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snai1 (snail family transcriptional repressor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SNAI1 (snail family transcriptional repressor 1)
Canis lupus familiaris (dog) : SNAI1 (snail family transcriptional repressor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snai1 (snail family transcriptional repressor 1)
Sus scrofa (pig) : SNAI1 (snail family transcriptional repressor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03164,274,710 - 164,279,199 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3164,274,710 - 164,279,378 (+)Ensembl
Rnor_5.03170,425,898 - 170,430,387 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43158,676,980 - 158,681,471 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13158,583,924 - 158,586,727 (+)NCBI
Celera3154,827,543 - 154,832,032 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snai1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620758
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.