Vnigr1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Vnigr1 (Vascular neointimal growth QTL 1) Rattus norvegicus

Symbol: Vnigr1
Name: Vascular neointimal growth QTL 1
RGD ID: 1578666
Trait: artery morphology trait   (VT:0002191)    
Measurement Type: artery lumen area   (CMO:0001409)    
LOD Score: 4.6
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23149,040,888 - 168,026,850RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.03156,381,661 - 176,418,101RGD_MAPPER_PIPELINERnor6.0
Rnor_5.03162,615,336 - 180,128,021RGDRnor5.0
RGSC_v3.43151,160,532 - 170,016,653RGDRGSC3.4
RGSC_v3.13151,066,442 - 169,922,503RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SHR/NHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Vnigr1Ratartery lumen area  IDA 1578306 RGD 

Experimental Condition
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Vnigr1Ratballoon angioplasty  IDA 1578306 RGD 

Measurement Method
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Vnigr1Ratex vivo light microscopy with digital image analysis  IDA 1578306 RGD 

Rat Strain
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Vnigr1RatBN/SsNHsd  IEA 1578306 RGD 
Vnigr1RatSHR/NHsd  IEA 1578306 RGD 

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Vnigr1Ratartery morphology trait  IDA 1578306 RGD 

Disease Annotations     Click to see Annotation Detail View
Hyperplasia  (IAGP)

Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SHR/NHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Linkage Analysis of Neointimal Hyperplasia and Vascular Wall Transformation Following Balloon Angioplasty. Nestor AL, etal., Physiol Genomics. 2006 Jan 24;.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7526217LOC102550898uncharacterized LOC1025508983149197582149204111Rat
7578813LOC102550999uncharacterized LOC1025509993149214619149276915Rat
9450932LOC103691948uncharacterized LOC1036919483149283224149290405Rat
621246Top1DNA topoisomerase I3149293469149376618Rat
7588290LOC102551164uncharacterized LOC1025511643149376458149385570Rat
3347Plcg1phospholipase C, gamma 13149385587149416330Rat
631431Zhx3zinc fingers and homeoboxes 33149417787149548671Rat
1588534Lpin3lipin 33149533719149558494Rat
1309607Emilin3elastin microfibril interfacer 33149558785149564785Rat
1310465Chd6chromodomain helicase DNA binding protein 63149596509149757765Rat
41102028LOC120102052small nucleolar RNA SNORA173149644352149644484Rat
11488586LOC108350515uncharacterized LOC1083505153149771791149807094Rat
40932337LOC120101777uncharacterized LOC1201017773150167127150174708Rat
1309653Ptprtprotein tyrosine phosphatase, receptor type, T3150189343151288145Rat
40961177LOC120101926uncharacterized LOC1201019263151060130151070987Rat
41321799LOC120101925uncharacterized LOC1201019253151286340151298063Rat
7599447LOC102547303uncharacterized LOC1025473033151346470151358385Rat
41289034LOC120102062small nucleolar RNA SNORA173151394507151394629Rat
11516994LOC108350621uncharacterized LOC1083506213151538876151540615Rat
1588363Rpl28-ps6ribosomal protein L28, pseudogene 63151557942151558349Rat
2318122Coa6-ps1cytochrome c oxidase assembly factor 6, pseudogene 13151583826151584063Rat
1359241Srsf6serine and arginine rich splicing factor 63151589546151594869Rat
1307316L3mbtl1L3MBTL histone methyl-lysine binding protein 13151597903151633657Rat
620232Sgk2serum/glucocorticoid regulated kinase 23151644102151669480Rat
41300955LOC120101778uncharacterized LOC1201017783151663565151672463Rat
1311004Ift52intraflagellar transport 523151672505151696975Rat
1308474Mybl2MYB proto-oncogene like 23151705254151733714Rat
41081803LOC1201019315S ribosomal RNA3151710338151710456Rat
1306224Gtsf1lgametocyte specific factor 1-like3151736020151738715Rat
735184Tox2TOX high mobility group box family member 23151853294151980086Rat
1305196Jph2junctophilin 23151994768152058941Rat
1303142Oser1oxidative stress responsive serine-rich 13152066975152085180Rat
41068047LOC120101779uncharacterized LOC1201017793152106514152109928Rat
1304960Gdap1l1ganglioside-induced differentiation-associated protein 1-like 13152110225152129693Rat
1307696Fitm2fat storage-inducing transmembrane protein 23152141346152147858Rat
9451115LOC103691964uncharacterized LOC1036919643152147833152150973Rat
7517936LOC102548241uncharacterized LOC1025482413152163163152195866Rat
1305296R3hdmlR3H domain containing-like3152171382152182151Rat
2810Hnf4ahepatocyte nuclear factor 4, alpha3152186787152248320Rat
41259414LOC120101780uncharacterized LOC1201017803152208294152216446Rat
1588362Atp5mc2-ps4ATP synthase membrane subunit c locus 2, pseudogene 43152271942152273241Rat
1305754Ttpalalpha tocopherol transfer protein like3152278246152296550Rat
1308390Serinc3serine incorporator 33152301882152321327Rat
628775PkigcAMP-dependent protein kinase inhibitor gamma3152330477152398085Rat
2031Adaadenosine deaminase3152398745152422854Rat
41063594LOC120101472uncharacterized LOC1201014723152453710152455392Rat
41301916LOC120101781uncharacterized LOC1201017813152459032152476353Rat
621867Ccn5cellular communication network factor 53152491247152502639Rat
619733Kcnk15potassium two pore domain channel subfamily K member 153152515237152521455Rat
628695Rims4regulating synaptic membrane exocytosis 43152520982152585070Rat
41175933LOC120102044small nucleolar RNA SNORA173152555953152556082Rat
61998Ywhabtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta3152659663152682105Rat
1563142Pabpc1lpoly(A) binding protein, cytoplasmic 1-like3152692825152725997Rat
1309029Tomm34translocase of outer mitochondrial membrane 343152729345152746295Rat
1312035Stk4serine/threonine kinase 43152745958152827747Rat
621524Kcns1potassium voltage-gated channel, modifier subfamily S, member 13152835642152843032Rat
1304986Wfdc5WAP four-disulfide core domain 53152849025152854868Rat
1303229Wfdc12WAP four-disulfide core domain 123152861461152862784Rat
11381365LOC108350520uncharacterized LOC1083505203152861663152870845Rat
1303026Wfdc15aWAP four-disulfide core domain 15A3152873311152874619Rat
1303042Wfdc15bWAP four-disulfide core domain 15B3152889453152899392Rat
3790Semg1semenogelin 13152910033152912882Rat
1564090Svs3bseminal vesicle secretory protein 3B3152929645152931919Rat
3791Svs4seminal vesicle secretory protein 43152948264152950499Rat
708390Svs3aseminal vesicle secretory protein 3A3152961706152963922Rat
1311054Svs6seminal vesicle secretory protein 63152978315152979986Rat
620290Svs5seminal vesicle secretory protein 53152996146152997756Rat
1303102Slpi-ps1secretory leukocyte peptidase inhibitor, pseudogene 13153019109153021371Rat
1302977Slpi-ps2secretory leukocyte peptidase inhibitor, pseudogene 23153056907153061611Rat
621768Slpisecretory leukocyte peptidase inhibitor3153082208153084457Rat
41115206LOC120101783uncharacterized LOC1201017833153092264153099459Rat
1309732Matn4matrilin 43153120605153135628Rat
1304786Rbpjlrecombination signal binding protein for immunoglobulin kappa J region-like3153134044153147421Rat
3650Sdc4syndecan 43153154888153173576Rat
1583224Sys1Sys1 golgi trafficking protein3153191061153195463Rat
1561934Tp53tg5TP53 target 53153200792153204337Rat
1559521Dbndd2dysbindin domain containing 23153216300153220651Rat
1307156Pigtphosphatidylinositol glycan anchor biosynthesis, class T3153227749153236922Rat
41388601LOC120101784uncharacterized LOC1201017843153247096153253177Rat
1309998Bola2-ps4bolA family member 2, pseudogene 43153272435153272781Rat
628757Wfdc2WAP four-disulfide core domain 23153286946153314832Rat
1597746Spint3serine peptidase inhibitor, Kunitz type, 33153293969153296717Rat
1597730Wfdc6aWAP four-disulfide core domain 6A3153305336153309144Rat
1597722Eppinepididymal peptidase inhibitor3153312396153319310Rat
1597713Wfdc8WAP four-disulfide core domain 83153323503153339849Rat
1303277Wfdc6bWAP four-disulfide core domain 6B3153339051153346940Rat
2324115Cmpk1-ps1cytidine/uridine monophosphate kinase 1, pseudogene 13153348087153348802Rat
41020389LOC120102050small nucleolar RNA SNORA173153355849153355965Rat
1596495Wfdc16WAP four-disulfide core domain 163153366913153370083Rat
1303087Wfdc9WAP four-disulfide core domain 93153380554153389055Rat
1596480Wfdc10aWAP four-disulfide core domain 10A3153390067153391420Rat
1596469Wfdc11WAP four-disulfide core domain 113153397585153406407Rat
11440643LOC10835057360S ribosomal protein L21 pseudogene3153406853153407451Rat
2319575Wfdc13WAP four-disulfide core domain 133153419553153421306Rat
2319289Spint4serine peptidase inhibitor, Kunitz type 43153430633153432821Rat
1302989Spint5pserine peptidase inhibitor, Kunitz type 53153449161153450953Rat
11423236LOC10835062260S ribosomal protein L13 pseudogene3153462786153463422Rat
1305295Wfdc3WAP four-disulfide core domain 33153464862153478952Rat
621627Dnttip1deoxynucleotidyltransferase, terminal, interacting protein 13153481718153505403Rat
1305382Ube2cubiquitin-conjugating enzyme E2C3153506636153509036Rat
1311973Tnnc2troponin C2, fast skeletal type3153513272153516033Rat
2323753Snx21sorting nexin family member 213153522474153532235Rat
70368Acot8acyl-CoA thioesterase 83153531192153542851Rat
1309789Zswim3zinc finger, SWIM-type containing 33153542741153558022Rat
1305715Zswim1zinc finger, SWIM-type containing 13153559104153562821Rat
1564523Spata25spermatogenesis associated 253153562479153566508Rat
1306409Neurl2neuralized E3 ubiquitin protein ligase 23153566659153569380Rat
1309070Ctsacathepsin A3153569106153574983Rat
1306695Pltpphospholipid transfer protein3153574825153592647Rat
1310800Pcif1phosphorylated CTD interacting factor 13153614147153627079Rat
9275514Pcif1l1phosphorylated CTD interacting factor 1 like 13153615149153615604Rat
628751Zfp335zinc finger protein 3353153618587153648213Rat
621320Mmp9matrix metallopeptidase 93153684158153692118Rat
620811Slc12a5solute carrier family 12 member 53153696517153735801Rat
11384587LOC108350521uncharacterized LOC1083505213153702015153703512Rat
1307702Ncoa5nuclear receptor coactivator 53153736420153769838Rat
41004453LOC120101785uncharacterized LOC1201017853153769706153778971Rat
619830Cd40CD40 molecule3153790372153805279Rat
2321Cdh22cadherin 223153845563153970630Rat
1311250Slc35c2solute carrier family 35 member C23154012262154023549Rat
1305784Elmo2engulfment and cell motility 23154023661154061259Rat
2318893Zfp663zinc finger protein 6633154084553154102521Rat
1592574Zfp334zinc finger protein 3343154112537154125087Rat
1308620Ocstamposteoclast stimulatory transmembrane protein3154131113154141611Rat
628786Slc13a3solute carrier family 13 member 33154141878154204604Rat
1591394Tp53rkaTp53 tumor protein p53 regulating kinase A3154219672154224841Rat
1306552Slc2a10solute carrier family 2 member 103154240395154252690Rat
41277354LOC120101927uncharacterized LOC1201019273154311068154317225Rat
620096Eya2EYA transcriptional coactivator and phosphatase 23154335598154519006Rat
1309544Zmynd8zinc finger, MYND-type containing 83154528917154629532Rat
40927946LOC120101928uncharacterized LOC1201019283154643003154645106Rat
6500902LOC100909912uncharacterized LOC1009099123154734556154738516Rat
620109Ncoa3nuclear receptor coactivator 33154738566154821395Rat
1305078Sulf2sulfatase 23154822079154904566Rat
41256047LOC120101930uncharacterized LOC1201019303154883783154884962Rat
41037570LOC120101786uncharacterized LOC1201017863154949768154955237Rat
11428843LOC108350523uncharacterized LOC1083505233154990008155001468Rat
11410735LOC108350623small nuclear ribonucleoprotein F-like3155116497155116945Rat
7706860LOC102551879uncharacterized LOC1025518793155188063155193426Rat
1306534Prex1phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 13155306950155456688Rat
40987626Rnu6-760RNA, U6 small nuclear 7603155442281155442387Rat
1304911Tp53rkbtumor protein p53 regulating kinase B3155529298155532662Rat
631430Arfgef2ARF guanine nucleotide exchange factor 23155547504155633652Rat
1307536Cse1lchromosome segregation 1 like3155641104155678866Rat
621778Stau1staufen double-stranded RNA binding protein 13155680000155725969Rat
11455577LOC108350624uncharacterized LOC1083506243155730671155738660Rat
1305634Ddx27DEAD-box helicase 273155744182155763380Rat
1306344Znfx1zinc finger, NFX1-type containing 13155764073155791777Rat
6494811LOC100911177uncharacterized LOC1009111773155792295155794886Rat
41171735Snord12csmall nucleolar RNA, C/D box 12C3155792525155792616Rat
40949806Snord12small nucleolar RNA, C/D box 123155794227155794317Rat
2954Kcnb1potassium voltage-gated channel subfamily B member 13155820255155913383Rat
3438Ptgisprostaglandin I2 synthase3155928564155964228Rat
1587812Rpl38-ps9ribosomal protein L38, pseudogene 93155980667155981020Rat
1310062B4galt5beta-1,4-galactosyltransferase 53156018056156033983Rat
41333938LOC120101788uncharacterized LOC1201017883156111384156129567Rat
41053495LOC120101999small nucleolar RNA SNORD223156137391156137513Rat
1308193Slc9a8solute carrier family 9 member A83156147855156198497Rat
620754Spata2spermatogenesis associated 23156202962156213283Rat
1303139Rnf114ring finger protein 1143156222487156234263Rat
620758Snai1snail family transcriptional repressor 13156248479156252969Rat
41024070LOC120101789uncharacterized LOC1201017893156293328156302959Rat
9266805LOC103691970uncharacterized LOC1036919703156306274156320301Rat
1305503Ube2v1ubiquitin conjugating enzyme E2 V13156317339156340198Rat
1309093Peds1plasmanylethanolamine desaturase 13156350135156369309Rat
41243497LOC120101790uncharacterized LOC1201017903156381035156386145Rat
2327CebpbCCAAT/enhancer binding protein beta3156398035156399466Rat
41390385LOC120101791uncharacterized LOC1201017913156476679156486008Rat
61965Ptpn1protein tyrosine phosphatase, non-receptor type 13156638811156687503Rat
1587669Ripor3RIPOR family member 33156687253156760524Rat
1308205Pard6bpar-6 family cell polarity regulator beta3156790540156811620Rat
7538602LOC102553156uncharacterized LOC1025531563156872879156873703Rat
7729081LOC102553092uncharacterized LOC1025530923156880762156882779Rat
71030Adnpactivity-dependent neuroprotector homeobox3156886921156921500Rat
1310120Dpm1dolichyl-phosphate mannosyltransferase subunit 1, catalytic3156919979156939522Rat
1307044Mocs3molybdenum cofactor synthesis 33156939763156941723Rat
631416Kcng1potassium voltage-gated channel modifier subfamily G member 13156960717156992877Rat
41400128LOC120101792uncharacterized LOC1201017923157046519157072830Rat
7710370LOC102554533uncharacterized LOC1025545333157193584157198233Rat
1307690Nfatc2nuclear factor of activated T-cells 23157195970157328640Rat
7683257LOC102554478uncharacterized LOC1025544783157324455157329119Rat
621421Atp9aATPase phospholipid transporting 9A (putative)3157360354157467628Rat
1597672Sall4spalt-like transcription factor 43157474067157491055Rat
41346936LOC120102059small nucleolar RNA SNORA173157621381157621508Rat
1309760Zfp93zinc finger protein 933157633211157654236Rat
1307948Zfp64zinc finger protein 643157666819157695774Rat
9110674LOC103691973uncharacterized LOC1036919733157729291157733784Rat
41244792LOC120101795uncharacterized LOC1201017953157750967157754157Rat
41115352LOC120101796uncharacterized LOC1201017963157963311157966275Rat
11383205LOC108350529uncharacterized LOC1083505293157997701158018156Rat
41064579LOC120101797uncharacterized LOC1201017973158065500158074798Rat
41192048LOC120101798uncharacterized LOC1201017983158080398158091573Rat
7744145LOC102555272uncharacterized LOC1025552723158173585158183177Rat
7550390LOC102555336uncharacterized LOC1025553363158184293158198409Rat
9197892LOC103691976uncharacterized LOC1036919763158212159158224699Rat
7678978LOC102555601uncharacterized LOC1025556013158276872158297268Rat
41299165LOC120101799uncharacterized LOC1201017993158289636158293611Rat
11491213LOC108350530uncharacterized LOC1083505303158297488158306485Rat
9290003LOC103691977uncharacterized LOC1036919773158395987158406402Rat
6490867Tshz2teashirt zinc finger homeobox 23158405469158666915Rat
7593399LOC102556304uncharacterized LOC1025563043158469505158477070Rat
41331986LOC120101800uncharacterized LOC1201018003158501059158512927Rat
41172582LOC120101801uncharacterized LOC1201018013158735442158744966Rat
41300298LOC120101802uncharacterized LOC1201018023158852835158858001Rat
1308451Zfp217zinc finger protein 2173158890464158931148Rat
41271408LOC120102108U2 spliceosomal RNA3158925769158925972Rat
11452902LOC108350531uncharacterized LOC1083505313158959041158969146Rat
7685764LOC102547159uncharacterized LOC1025471593159021085159033695Rat
41254347LOC120101473uncharacterized LOC1201014733159041850159044575Rat
41054110LOC120101803uncharacterized LOC1201018033159099211159103562Rat
628644Bcas1brain enriched myelin associated protein 13159136077159219072Rat
40937752Rps23-ps5ribosomal protein S23, pseudogene 53159137524159138024Rat
41225616LOC120101805uncharacterized LOC1201018053159149220159164695Rat
2462Cyp24a1cytochrome P450, family 24, subfamily a, polypeptide 13159275947159290383Rat
2324021Pfdn4prefoldin subunit 43159303173159311221Rat
41161701LOC120101807uncharacterized LOC1201018073159427661159430526Rat
41063718LOC120101806uncharacterized LOC1201018063159431516159435707Rat
41241031LOC120101808uncharacterized LOC1201018083159432076159435278Rat
1562846Dok5docking protein 53159515886159652811Rat
7497111LOC102552784uncharacterized LOC1025527843159656411159663132Rat
11445730LOC108350532uncharacterized LOC1083505323159804025159818898Rat
7603413LOC102557230uncharacterized LOC1025572303159891981159922501Rat
41293147LOC120101809uncharacterized LOC1201018093159922502159923329Rat
7559980LOC102552273uncharacterized LOC1025522733159952069159955323Rat
7647918LOC102552372uncharacterized LOC1025523723159988001160011215Rat
41358041LOC120101810uncharacterized LOC1201018103160176231160182446Rat
40963483LOC120101474uncharacterized LOC1201014743160291927160295151Rat
11358065LOC108350533uncharacterized LOC1083505333160358656160398067Rat
41328089LOC120101811uncharacterized LOC1201018113160395523160397395Rat
41308635LOC120101812uncharacterized LOC1201018123160400655160428412Rat
41305630LOC120101475uncharacterized LOC1201014753160489808160500414Rat
9419535LOC103691983uncharacterized LOC1036919833160583625160590797Rat
41195593LOC120101813uncharacterized LOC1201018133160729623160732726Rat
40936439LOC120101814uncharacterized LOC1201018143160746754160750295Rat
1589642Cbln4cerebellin 4 precursor3160799587160807143Rat
3056Mc3rmelanocortin 3 receptor3161016347161017444Rat
7628126LOC102549927uncharacterized LOC1025499273161031714161036434Rat
1587296Bud31-ps1Bud31 homolog, pseudogene 13161059437161060217Rat
7668537LOC102550081uncharacterized LOC1025500813161091999161098131Rat
1311378Fam210bfamily with sequence similarity 210, member B3161118228161128400Rat
628895Aurkaaurora kinase A3161128309161144524Rat
1309267Cstf1cleavage stimulation factor subunit 13161144522161156294Rat
1310643Cass4Cas scaffold protein family member 43161162520161202523Rat
1311072Rtfdc1replication termination factor 2 domain containing 13161208005161237687Rat
7496421Gcnt7glucosaminyl (N-acetyl) transferase family member 73161218985161223039Rat
1307805Fam209family with sequence similarity 2093161240062161241747Rat
41352723LOC120102103small Cajal body-specific RNA 23161253399161253638Rat
1303185Tfap2ctranscription factor AP-2 gamma3161315114161322998Rat
41332896LOC120101815uncharacterized LOC1201018153161476609161487216Rat
7515725LOC102550368uncharacterized LOC1025503683161502691161504794Rat
620743Bmp7bone morphogenetic protein 73161639915161716938Rat
1306454Spo11SPO11 initiator of meiotic double strand breaks3161755299161770930Rat
1311540Rae1ribonucleic acid export 13161779096161794048Rat
1308503Rbm38RNA binding motif protein 383161801577161814381Rat
7673981LOC102550425uncharacterized LOC1025504253161845183161847728Rat
621131Uchl3-ps1ubiquitin C-terminal hydrolase L3, pseudogene 13161856954161857835Rat
2321501Ctcfl1CCCTC-binding factor like 13161868306161890949Rat
9103386LOC103691985ubiquitin-60S ribosomal protein L40 pseudogene3161891688161913507Rat
3267Pck1phosphoenolpyruvate carboxykinase 13161930256161936205Rat
41024328LOC120101816uncharacterized LOC1201018163161954459161958941Rat
7736453LOC102550673uncharacterized LOC1025506733161959231161965399Rat
619956Zbp1Z-DNA binding protein 13161993351162009297Rat
1308255Pmepa1prostate transmembrane protein, androgen induced 13162011884162060343Rat
11445912LOC108350627uncharacterized LOC1083506273162128529162131088Rat
41020078LOC120101817uncharacterized LOC1201018173162151965162153635Rat
11512891LOC108350535uncharacterized LOC1083505353162206689162216042Rat
9145180LOC103691986uncharacterized LOC1036919863162231094162259054Rat
41349051Capg-ps1capping actin protein, gelsolin like, pseudogene 13162244122162249867Rat
41209988Rnu6-1162RNA, U6 small nuclear 11623162314531162314628Rat
1589960Cimip1ciliary microtubule inner protein 13162315542162322456Rat
9091054Ankrd60ankyrin repeat domain 603162365158162376491Rat
41262199Eif4e-ps9eukaryotic translation initiation factor 4E, pseudogene 93162385449162420625Rat
1311959Rab22aRAB22A, member RAS oncogene family3162459727162506129Rat
68326VapbVAMP associated protein B and C3162535974162578747Rat
1562045Apcdd1lAPC down-regulated 1 like3162587484162658362Rat
1309423Stx16syntaxin 163162853764162882489Rat
1311351Npepl1aminopeptidase-like 13162893932162906491Rat
2325345Mir296microRNA 2963163051838163051915Rat
2325373Mir298microRNA 2983163052291163052372Rat
2716GnasGNAS complex locus3163071003163136350Rat
7611139LOC102548488uncharacterized LOC1025484883163073058163083901Rat
1590753Nelfcdnegative elongation factor complex member C/D3163213765163224886Rat
708479Ctszcathepsin Z3163224875163235645Rat
1589557Tubb1tubulin, beta 1 class VI3163247990163257460Rat
621374Atp5f1eATP synthase F1 subunit epsilon3163259072163261974Rat
1594395Prelid3bPRELI domain containing 3B3163263059163271055Rat
1565819Zfp831zinc finger protein 8313163393787163510654Rat
11404047LOC10835054640S ribosomal protein S15 pseudogene3163450071163450996Rat
6497120Stmnl-ps3stathmin like, pseudogene 33163522046163522505Rat
2534Edn3endothelin 33163562307163586636Rat
7587488Zfp431l5zinc finger protein 431 like 53163859444163896384Rat
41179636Zfp873l3zinc finger protein 873 like 33163957222163996393Rat
41261584Zfp951-ps3zinc finger protein 951, pseudogene 33164012218164036016Rat
41211592LOC120101823zinc finger protein 431-like3164054719164069284Rat
41325508LOC120101708zinc finger protein 431-like3164095206164099787Rat
7593822Znf431l9zinc finger protein 431 like 93164123501164136267Rat
7615043Zfp931l1zinc finger protein 931 like 13164153061164177043Rat
7617673Zfp970lzinc finger protein 970 like3164181072164194064Rat
7644011Zfp950l10zinc finger protein 950 like 103164203387164215285Rat
7607116Zfp931l2zinc finger protein 931 like 23164259160164291122Rat
40961274LOC120093132zinc finger protein 700-like3164281711164287090Rat
9125638LOC103691992uncharacterized LOC1036919923164305929164357155Rat
41095601LOC120101824zinc finger protein 700-like3164329122164334501Rat
7607434Znf431l-ps2zinc finger protein 431 like, pseudogene 23164421968164437948Rat
41063237Zfp709-ps1zinc finger protein 709, pseudogene 13164457362164474349Rat
41258105LOC120101826zinc finger protein 431-like3164541157164563235Rat
7715755Zfp938lzinc finger protein 938 like3164610572164633349Rat
1587564LOC689816similar to ribosomal protein L243164689113164689645Rat
6489349Zfp931zinc finger protein 9313164707872164792678Rat
76532713300002I08Rikl2RIKEN cDNA 3300002I08 gene like 23164792547164812760Rat
9385968Rpl39-ps3ribosomal protein L39, pseudogene 33164891223164891378Rat
41280912Zfp873l2zinc finger protein 873 like 23164917106164922371Rat
7674516LOC102551102zinc finger protein 120-like3164938968164944655Rat
9248290LOC103692008zinc finger protein 431-like3164984587164995765Rat
11365897Zfp873l1zinc finger protein 873 like 13164991547164993910Rat
1587549Gapdh-ps36Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 363165005060165005645Rat
7645005Zfp931l4zinc finger protein 931 like 43165093906165099686Rat
1587295Rpl7-ps15ribosomal protein L7, pseudogene 153165188160165189004Rat
1587343Rpl7a-ps1ribosomal protein L7a, pseudogene 13165194268165195114Rat
1303029Phactr3phosphatase and actin regulator 33165205247165423692Rat
41350938LOC12010182760S ribosomal protein L19-like3165390485165391421Rat
69429Sycp2synaptonemal complex protein 23165431715165502134Rat
1589983Akr1b1-ps3aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 33165488676165490021Rat
1586306Ppp1r3dprotein phosphatase 1, regulatory subunit 3D3165502384165505455Rat
1311952Fam217bfamily with sequence similarity 217, member B3165505574165515273Rat
1311632Cdh26cadherin 263165520523165573191Rat
7691681LOC102555003uncharacterized LOC1025550033165578743165581126Rat
41352777LOC120101828uncharacterized LOC1201018283165587526165602249Rat
2319699Tada3-ps3transcriptional adaptor 3, pseudogene 33166105386166177242Rat
7700261LOC102554907uncharacterized LOC1025549073166346012166366449Rat
40989414LOC120101830uncharacterized LOC1201018303166362812166363812Rat
41322323Rpl8-ps3ribosomal protein L8, pseudogene 33166446064166450941Rat
621091Cdh4cadherin 43166525092167003380Rat
1588072Taf4TATA-box binding protein associated factor 43167017992167083413Rat
40948732LOC120102111U2 spliceosomal RNA3167099578167099736Rat
1563798Lsm14bLSM family member 14B3167125633167136417Rat
61851Psma7proteasome 20S subunit alpha 73167137279167143626Rat
621847Ss18l1SS18L1 subunit of BAF chromatin remodeling complex3167143730167165253Rat
1359243Mtg2mitochondrial ribosome-associated GTPase 23167165542167181358Rat
620630Hrh3histamine receptor H33167191551167196642Rat
1311312Osbpl2oxysterol binding protein-like 23167210945167256219Rat
41234152LOC120101831uncharacterized LOC1201018313167251785167265332Rat
69248Adrm1ADRM1 26S proteasome ubiquitin receptor3167265435167270197Rat
621023Lama5laminin subunit alpha 53167270296167318370Rat
621038Rps21ribosomal protein S213167346437167347459Rat
1310089Cables2Cdk5 and Abl enzyme substrate 23167347527167362274Rat
1596090Rbbp8nlRBBP8 N-terminal like3167364048167378993Rat
1561365Gata5GATA binding protein 53167418563167426751Rat
7633259LOC102552888uncharacterized LOC1025528883167478009167483967Rat
11475968LOC108350538uncharacterized LOC1083505383167483967167558889Rat
9685084Mir1bmicroRNA 1b3167487117167487201Rat
620228Slco4a1solute carrier organic anion transporter family, member 4a13167559177167578307Rat
7661482LOC102552550uncharacterized LOC1025525503167582503167591218Rat
1306076Ntsr1neurotensin receptor 13167606215167656371Rat
127284715LOC12162783760S ribosomal protein L17-like3167631958167632564Rat
1308612MrgbpMRG domain binding protein3167697129167700592Rat
69324Ogfropioid growth factor receptor3167703173167709459Rat
1310255Col9a3collagen type IX alpha 3 chain3167711776167734468Rat
1305899Tcfl5transcription factor like 53167734471167754174Rat
1596014Atp5mf-ps2ATP synthase membrane subunit f, pseudogene 23167761524167761976Rat
1311173Dido1death inducer-obliterator 13167772535167825894Rat
735024Gid8GID complex subunit 8 homolog3167826006167836759Rat
1311940Slc17a9solute carrier family 17 member 93167839246167857462Rat
1559760Bhlhe23basic helix-loop-helix family, member e233167889009167891223Rat
41182488LOC120101832uncharacterized LOC1201018323167997376168004204Rat
2325458Mir124-3microRNA 124-33168014952168015038Rat
1308932Ythdf1YTH N6-methyladenosine RNA binding protein F13168024660168040172Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10501D3Mco33393163577121163577474Ratregion
10502D3Mgh101083159898684159898795Ratregion
11191D3Wox61293156687232156687364Ratregion
34178D3Mgh231393162184655162184794Ratregion
34240D3Mgh11503161695835161695983Ratregion
34296D3Mgh241163152593496152593614Ratregion
34304D3Mgh181493154135827154135982Ratregion
34316D3Mgh21493155617360155617519Ratregion
34682D9Mit101503161935792161935942Ratregion
11278D3Arb122523153156423153156701Ratregion
11363D3Wox71273152914821152915000Ratregion
11365D3Arb133152914793152915004Ratregion
11366D3Mgh31123152952649152952773Ratregion
37372D3Rat2362173150610883150611091Ratregion
35404D3Rat601533149199787149199938Ratregion
37912D3Rat1992403156990411156990649Ratregion
36410D3Mgh301413151079974151080115Ratregion
36616D3Rat21743162581869162582043Ratregion
36745D3Rat11593168026691168026850Ratregion
36759D3Rat591373161299432161299569Ratregion
34773D3Rat31383160482009160482157Ratregion
38244D3Rat1322083162923310162923518Ratregion
38316D3Rat681993151773723151773922Ratregion
40664D3Rat1362133159180483159180698Ratregion
40676D3Rat1422243157309278157309487Ratregion
40300D3Rat1971553165511109165511264Ratregion
38924D3Rat1022303155979184155979410Ratregion
39418D3Rat1412443157322804157323038Ratregion
39564D3Rat1982023159029567159029774Ratregion
42134D3Arb242403161935834161936089Ratregion
41210D3Rat1451493149040888149041023Ratregion
41238D3Rat1381543159699356159699507Ratregion
41292D3Rat1391483158943819158943977Ratregion
41322D3Rat1371733161192952161193129Ratregion
42679D3Rat2442223152229999152230220Ratregion
42680D3Rat2122053149771171149771374Ratregion
42682D3Rat2423083167680072167680372Ratregion
42683D3Rat2412293163370746163370971Ratregion
41108D3Rat1441493149313702149313851Ratregion
41760D3Rat2351393158714272158714409Ratregion
41810D3Rat2091353151534947151535084Ratregion
41844D3Rat2432233158002166158002385Ratregion
43727D3Got1292553149374167149374425Ratregion
43731D3Got1361723149585637149585809Ratregion
43732D3Wox281333149232681149232808Ratregion
43734D3Got1282163152116564152116780Ratregion
43736D3Got1332833150686852150687133Ratregion
43738D3Got1412963153326422153326717Ratregion
43740D3Got1452373154014561154014798Ratregion
43741D3Got1522323154070095154070327Ratregion
43742D3Got1461813154945586154945764Ratregion
43743D3Got1472783155476447155476725Ratregion
43744D3Got1511823155414056155414238Ratregion
43745D3Got1811663154405480154405646Ratregion
43748D3Got1602773161455439161455716Ratregion
43751D3Got1631703163489684163489852Ratregion
43752D3Got1572503160714036160714286Ratregion
43753D3Got1681353162683051162683183Ratregion
43754D3Got1652733163274770163275043Ratregion
43755D3Got1712213165443122165443343Ratregion
43756D3Got1671483164177361164177504Ratregion
43756D3Got1671483164177361164177504Ratregion
43756D3Got1671483164477104164477250Ratregion
43756D3Got1671483164477104164477250Ratregion
43757D3Got1662833163556062163556345Ratregion
43757D3Got1662833163556132163556345Ratregion
43758D3Wox12113166177348166177555Ratregion
43759D3Got1742093165222941165223150Ratregion
43760D3Got1703813165772500165772878Ratregion
43761D3Got1731283166711119166711247Ratregion
43763D3Got1721423167455813167455955Ratregion
43893D5Got951703151808228151808395Ratregion
60369D3Got1342063151830532151830738Ratregion
60372D3Got1382183150979153150979373Ratregion
60373D3Got1403153122034153122181Ratregion
60375D3Got1491173154346772154346889Ratregion
60376D3Got1502173154293013154293231Ratregion
60377D3Got1531693157545490157545656Ratregion
60378D3Got1541403156512484156512624Ratregion
60379D3Got1551503155951423155951573Ratregion
60380D3Got1582103157673095157673305Ratregion
60381D3Got1612833162232764162233047Ratregion
60384D3Got1692353163383846163384081Ratregion
69538D3Uwm71963152547951152548167Ratregion
69539D3Uwm81803153168578153168764Ratregion
66477D3Mco222233149662152149662411Ratregion
66481D3Mco242013163595843163596045Ratregion
66596D3Mco63143152633638152633940Ratregion
66598D3Mco72083150079679150079897Ratregion
1631510D3Wox401453167192318167192463Ratregion
1581964D3Mco352023166863347166863549Ratregion
1581968D3Mco711823162104144162104241Ratregion
1581968D3Mco711823162104144162104326Ratregion
1581974D3Mco851353165559913165560048Ratregion
1581976D3Mco671513166173343166173494Ratregion
1581978D3Mco841743165169843165170019Ratregion
1581982D3Mco541803166576742166576920Ratregion
1581982D3Mco541803166576742166577451Ratregion
1581982D3Mco541803166576859166576920Ratregion
1581984D3Mco793183163577127163577445Ratregion
1581986D3Mco831953165250878165251073Ratregion
1581990D3Mco663165728676165728811Ratregion
1581992D3Mco522263166781685166781911Ratregion
1581994D3Mco403113163555942163556253Ratregion
1581998D3Mco591753166653001166653176Ratregion
1582000D3Mco442473167830297167830544Ratregion
1582006D3Mco581723166639728166639900Ratregion
1582010D3Mco652323165843099165843331Ratregion
1582012D3Mco611383165574796165574936Ratregion
1582014D3Mco491763166824576166824754Ratregion
1582026D3Mco511503166793175166793325Ratregion
1582032D3Mco762113162619258162619469Ratregion
1582034D3Mco481933166960324166960517Ratregion
1582040D3Mco391743167914451167914627Ratregion
1582042D3Mco782253161994411161994638Ratregion
1582046D3Mco452193167725610167725829Ratregion
1582048D3Mco802233163584479163584700Ratregion
1582050D3Mco561813166689940166690121Ratregion
1582054D3Mco642333166159472166159705Ratregion
1582060D3Mco471393166972752166972891Ratregion
1582064D3Mco622103165645862165646072Ratregion
1582068D3Mco821683165267902165268067Ratregion
1582076D3Mco342033166863220166863423Ratregion
1582078D3Mco572483166692672166692920Ratregion
1582080D3Mco742133165678962165679175Ratregion
1582088D3Mco531673166585339166585506Ratregion
1582090D3Mco461693167003822167003991Ratregion
1582096D3Mco721553162060765162060920Ratregion
1582098D3Mco631303165806737165806867Ratregion
1582102D3Mco751913165538050165538241Ratregion
1628950D3Wox361063153683950153684056Ratregion
1629518DXGot1422993165284261165284328Ratregion
1641320D3Cebr31683151040012151040180Ratregion
1632669D3Got3062783159045576159045854Ratregion
1632828D3Got2732463157723748157723994Ratregion
1633153D3Wox422853156687086156687374Ratregion
1640717D3Got2381593163209293163209452Ratregion
1635837D3Got237983157330915157331013Ratregion
1636073D3Cebr51513155367549155367700Ratregion
1637880D3Got2502363149933234149933467Ratregion
2302875D3Hmgc141223167635060167635182Ratregion
2302879D3Hmgc111963167375372167375568Ratregion
2302883D3Hmgc92023167068732167068934Ratregion
2302887D3Hmgc132073167599713167599920Ratregion
2302919D3Hmgc82183166582847166583067Ratregion
2302921D3Hmgc171483167963429167963577Ratregion
2302923D3Hmgc22823165936723165937005Ratregion
2302925D3Hmgc52283166286778166287006Ratregion
2302931D3Hmgc32363165959442165959678Ratregion
2302937D3Hmgc42833166284884166285167Ratregion
2302941D3Hmgc103167227635167227846Ratregion
2302951D3Hmgc71483166671506166671654Ratregion
2302953D3Hmgc152183167797741167797959Ratregion
2302955D3Hmgc62783166307064166307342Ratregion
2302961D3Hmgc162363167830309167830545Ratregion
7192559AI7173931183151791732151791850Ratregion
5035993PMC55812P11143156398064156398178Ratregion
5036001PMC61082P12043159290046159290250Ratregion
5038768RH1273211803154024874154025054Ratregion
5036047Kcnb11113155828898155829009Ratregion
5036131Cyp242563159289779159290035Ratregion
5036205D2Bwg0647e3463167178043167178389Ratregion
7206584Cebpb2613156399013156399274Ratregion
5036275Edn33003163563245163563545Ratregion
5039200RH1275692033161814098161814301Ratregion
5036456Plcg11523149412814149412966Ratregion
5039050RH1274842173154822222154822439Ratregion
5039128RH1275282093153220349153220558Ratregion
5036789AU0492101993151534887151535085Ratregion
5035550YWHAB1023155661998155662100Ratregion
5035550YWHAB1023155661998155662100Ratregion
7205924PMC22380P23483163086945163087293Ratregion
7206104Timp21203163247412163248931Ratregion
7206180Cebpb973156399163156399260Ratregion
7206200Plcg11143149412572149412817Ratregion
5028731STS-N256881223149417889149418011Ratregion
5031406PMC162218P16633153691448153692111Ratregion
5034139RH1415121503153505203153505353Ratregion
5026106RH1309341863161322773161322959Ratregion
5034299G651975733165464853165465426Ratregion
5026382RH1319912023154518554154518756Ratregion
5034502BF4097871813151293753151293934Ratregion
5034502BF4097871813151293753151294012Ratregion
5029207RH1439231223165505177165505299Ratregion
5034512BI2803651923163259116163260557Ratregion
5026616RH1328881813152279518152279699Ratregion
5029253RH1440942173154617229154617446Ratregion
5026814RH1336361853161202302161202487Ratregion
5026906RH1339922123149096366149096578Ratregion
5026908RH1339982093167255731167255940Ratregion
5029399RH1446431503167298059167298209Ratregion
5029569BE0956271593154356079154356238Ratregion
5032205AJ006140953153120661153120756Ratregion
5032251AI6621771003162505970162506070Ratregion
5026938RH1341102013165502641165502842Ratregion
5035388AA8918932103153574324153574723Ratregion
5027135RH117171613163135975163136136Ratregion
5027239AW3196441463162500737162500883Ratregion
5032761RH1352022183167480860167481079Ratregion
5032835RH1366651833154625974154626157Ratregion
5035242BM3850931533153628702153628855Ratregion
5035276AW5294461693155943587155943756Ratregion
5027543AW1461261063151594680151594786Ratregion
5027569SHGC-329411253152067444152067569Ratregion
5027583BB045044793155425628155425707Ratregion
5030153BF4010712023166980811166981013Ratregion
5024972C785631563157472931157473087Ratregion
5027667Bmp72543161716033161716287Ratregion
5027707RH463781503152067563152067713Ratregion
5030519BF4036311623153796507153796669Ratregion
5030545AI0699731563156589147156589303Ratregion
5033285RH1382712263159129879159130968Ratregion
5025290RH1277521983153155050153155248Ratregion
5025438RH1283141923156233867156234059Ratregion
5028155D13Mit2241133154440566154441900Ratregion
5030757BF4045582013161241405161241606Ratregion
5033549RH1392331833165501365165501548Ratregion
5033611RH1394572363155093939155094175Ratregion
5025728RH1294301803151980478151980658Ratregion
5030989BE1088341663153558872153559038Ratregion
5031037AA9635241813154012433154012597Ratregion
5033743RH1399571833167164983167165166Ratregion
5033815RH1402232123152679677152680374Ratregion
5028410C873891553153204434153204589Ratregion
5028412C855142043162906262162906466Ratregion
5028420AU0435352113167269626167270028Ratregion
5052003RH947831963152245623152245819Ratregion
5055975RH1441111433164858619164858762Ratregion
5056385RH1443482353149674946149675180Ratregion
5051771RH946491753155827783155827958Ratregion
5056559RH1444481133150191637150191750Ratregion
5052055RH948141563161926118161926274Ratregion
5054263RH1431241933167743544167743737Ratregion
5054267RH1431261073157600761157600868Ratregion
5057440AW2540721923155260597155260788Ratregion
5057508AW5224751433149614786149614929Ratregion
5055359RH1437561033161323832161323935Ratregion
5059486AW5245091023153851121153851223Ratregion
5055471RH1438201213149598826149598947Ratregion
5055629RH1439111243165501694165501818Ratregion
5055741RH1439751013157356170157356270Ratregion
5057954BE1017391573151597500151597657Ratregion
5055851RH1440392333165336489165336722Ratregion
5059674BF3941731593150768118150768277Ratregion
5052388D17Mit1021593153683940153684099Ratregion
5055495RH1438341903156939485156939675Ratregion
5058972BF3938991853153100269153100454Ratregion
5055575RH1438802293153626728153626957Ratregion
5055673RH1439361433165514637165514780Ratregion
5059998BF4002441793154949809154949988Ratregion
5049904RH1337491823152835887152836069Ratregion
5052353X753161613161814138161814299Ratregion
5059084BF3874471693156981844156982013Ratregion
5050172RH1339032073156349563156349770Ratregion
5050568RH1341311873152736237152736424Ratregion
5052583RH1256981603155678677155678837Ratregion
5050928RH1343391893156891420156891609Ratregion
5054089RH1430241183167980038167980156Ratregion
5050448RH1340622193149557944149558163Ratregion
5052775RH1422661843152827378152827562Ratregion
5054215RH1430962563157417025157417285Ratregion
5054377RH1431891953153120682153120877Ratregion
5050506RH1340951873161814098161814285Ratregion
5041664RH1289871933167832495167832688Ratregion
5044008RH1303571963154142035154142231Ratregion
5044048RH1303801803162505856162506036Ratregion
5040708RH1284381983167270438167270636Ratregion
5044636RH1307171873161641293161641480Ratregion
5044666RH1307341863155928598155928784Ratregion
5044666RH1307341863155928598155928784Ratregion
5044676RH1307402013163224497163224698Ratregion
5044022RH1303651863153736642153736828Ratregion
5044060RH1303872123153618557153618769Ratregion
5044196RH1304641973151994910151995107Ratregion
5045906RH1314471813156687584156687765Ratregion
5041862RH1291021953162906291162906486Ratregion
5044258RH1305001813161129117161129299Ratregion
5048690RH1330491993167411982167412181Ratregion
5048798RH1331111823153557779153557961Ratregion
5046270RH1316561903158887520158887710Ratregion
5044922RH1308811833162578463162578646Ratregion
5045478RH1312011823153391168153391350Ratregion
5046572RH1318302113152397761152397972Ratregion
5046580RH1318351813155827817155827998Ratregion
5047466RH1323442173162882075162882292Ratregion
5046066RH1315381873154821165154821352Ratregion
5048964RH1332082103167418723167418933Ratregion
5045728RH1313452203155532236155532456Ratregion
5046226RH1316312013149239859149240061Ratregion
5047854RH1325671883153612781153612969Ratregion
5046688RH1318971863153702051153702237Ratregion
5045916RH1314532163151589307151589523Ratregion
5049306RH1334052203167772596167772816Ratregion
5046792RH1319572203150189385150189605Ratregion
5047102RH1321342123163126950163127162Ratregion
5039566RH1277791853158396146158396331Ratregion
5047414RH1323142003153712804153713004Ratregion
5049624RH1335882093153562524153562733Ratregion
5039506RH1277441853152729364152729549Ratregion
5043080RH1298212053156203269156203474Ratregion
5041166RH1287001683155680057155680225Ratregion
5043672RH1301602083152301820152302028Ratregion
7193025Nfatc22923157292345157292637Ratregion
5042966RH1297512103155633414155633624Ratregion
5043082RH1298222173156203324156203541Ratregion
5041412RH1288421863149283364149283550Ratregion
5072744RH1370282043161154780161154984Ratregion
5071928RH1353661903162383985162384175Ratregion
5072048RH1354352173161993532161993749Ratregion
5072176RH1366961303155152210155152340Ratregion
5073962RH1377392433157197958157198201Ratregion
5075764RH1387831773155680889155681066Ratregion
5072424RH1368411323156811291156811423Ratregion
5076408RH1391581433149421692149421835Ratregion
5074504RH1380552103167836192167836402Ratregion
5076920RH1394551343153629917153630051Ratregion
5077042RH1395261913159136607159136798Ratregion
5076130RH1389961583161128091161128249Ratregion
5077518RH1398021803151594171151594351Ratregion
5079374RH1409591823151669089151669271Ratregion
5079482RH1410231803155764182155764362Ratregion
5079654RH1411262033158890616158890819Ratregion
5077996RH1400812153149418754149418969Ratregion
5076466RH1391911623163075746163075908Ratregion
5077692RH1399031803153318618153319237Ratregion
5078258RH1402352103153531910153532120Ratregion
5079742RH1411771503167578111167578261Ratregion
5079854RH1412411803164980526164980620Ratregion
5079932RH1412862103163263089163263299Ratregion
5078232RH1402201973161128052161128249Ratregion
5078388RH1403131943163801903163802096Ratregion
5070762RH1346892133161640112161640325Ratregion
5080298RH1414992193153272349153272568Ratregion
5080298RH1414992193153272349153272568Ratregion
5073436RH1374352073159647850159648057Ratregion
5071334RH1350222143152085678152085892Ratregion
5073636RH1375512153154112669154112884Ratregion
5072890RH1371132103155633412155633622Ratregion
5071642RH1352002063158511005158511211Ratregion
5071692RH1352291823156236942156237124Ratregion
5073928RH1377201313149422919149423050Ratregion
5074034RH1377812443149425956149426200Ratregion
5070912RH1347782163155823117155823333Ratregion
5070964RH1348081823153011182153011849Ratregion
5070964RH1348081823153083076153083735Ratregion
5071096RH1348842103154734641154734851Ratregion
5071272RH1349871833151733381151733564Ratregion
5073706RH1375912103162496957162497167Ratregion
5072150RH1366822053161126306161126511Ratregion
5074692RH1381631243155188167155188291Ratregion
5074736RH1381891973153336361153336558Ratregion
5066778AU0481561643152202117152202275Ratregion
5067530AU0476891793166300437166300616Ratregion
5068694AU0469902773155553925155554202Ratregion
5070025RH944241603163136060163136220Ratregion
5070137RH944941773149415194149415372Ratregion
5069626AU0463744143156558520156558928Ratregion
5070338AW120700793167003259167003338Ratregion
5069102AU0467232723165250807165251079Ratregion
5069268AU0466082483164082726164082802Ratregion
5060534BI2924711583151721453151721611Ratregion
5062346BF4031291563161017830161017986Ratregion
5065526BF4123711303166366132166366262Ratregion
5061020BF3897242333163090308163090541Ratregion
5060284AW5311031743161323762161323936Ratregion
5060338AW5314981893165539245165539434Ratregion
5063740AI7173932003151791753151792836Ratregion
5063772AW5351431593157778772157778931Ratregion
5065134AI0447951843167708162167708346Ratregion
5065208BE1211881503163465357163465507Ratregion
5065474BE1156171683149293404149293572Ratregion
5062234BE1129542053167348194167348399Ratregion
5062330BF4031061893153735833153736022Ratregion
5064132BE1140852183153777764153777876Ratregion
5064132BE1140852183153777764153777982Ratregion
5065692BE1096331093155678268155678377Ratregion
5060906BF3959491823163083790163083972Ratregion
5060960AA8749221883151592459151592647Ratregion
5062518BE1067851503167795420167795570Ratregion
5064436BF3992071993151147438151147637Ratregion
5061032BF3897651833154038965154039148Ratregion
5062838BI2951321583161839720161839878Ratregion
5064490BE1146342103156940222156940432Ratregion
5066196BF4077781303158579878158580008Ratregion
5066196BF4077781303158580983158581048Ratregion
5066224PMC114562P24753156398377156398852Ratregion
5061198BE0992141743162901084162901258Ratregion
5063014BF4101832303152385476152385706Ratregion
5064746BE1084441653153902746153902911Ratregion
5064762BF4050311683149343945149344113Ratregion
5066270PMC133770P12873161319439161319726Ratregion
5066326PMC152262P31743161934097161934271Ratregion
5063268BF4106591543157164283157164437Ratregion
5064846BE1086112033160807995160808199Ratregion
5066564AU0482821403150790129150790269Ratregion
5082195BI2805212193152979063152979891Ratregion
5082243BI2809382203152979062152979891Ratregion
5086131AA8592711903154024871154025061Ratregion
5087042AA8187981803163225050163225230Ratregion
5087122BM3892491703149307989149308159Ratregion
5087534PMC293470P11463152501701152501847Ratregion
5087281AW5322511543161763931161764085Ratregion
5087564PMC316400P11033152239640152239743Ratregion
5082719BF4169681643152996908152997626Ratregion
5087512PMC21741P14283156398744156399172Ratregion
5089153AU0489861073154497274154497310Ratregion
5089825AU0493851333150820313150820446Ratregion
5083239BI2757022113155931041155931252Ratregion
5083489BE1002401683166854066166854234Ratregion
5090655AU0498822273165843111165843338Ratregion
5083797AI2306572113163122699163122911Ratregion
5089579AU0492392483151608921151609170Ratregion
5090631AU0498682213157527997157528218Ratregion
5084016AI2324131933167346584167347027Ratregion
5084122AA9436661223167191632167191754Ratregion
5084564AI0139061943154822494154822688Ratregion
5084400AA7998511403157666950157667090Ratregion
5087562PMC316377P21473156398328156398475Ratregion
5087614PMC55812P21173156398061156398178Ratregion
5081835BF4150441863158437665158437851Ratregion
5087640PMC86435P15503161930677161931227Ratregion
5088141Uqcrb1963156134555156134751Ratregion
5085423AI0699862013161236437161236638Ratregion
5085473BM3911401863155193023155193209Ratregion
5080898RH1418462063157360488157360694Ratregion
5081022RH1419192153167347605167347820Ratregion
5085177BM3898791543152295684152295838Ratregion
5090411AU0497341823160766898160767080Ratregion
5090471AU0497701763155434203155434379Ratregion
5088641AU0486902313165703537165703768Ratregion
5089131AU0489721713153586208153586379Ratregion
5082689BG3735961303161446515161446645Ratregion
5082707BF416756993152949614152949713Ratregion
5085782BF3881031983152810385152810583Ratregion
5084598AI2360511273149558850149558977Ratregion
5084600AI2354212273151696694151696921Ratregion
5082727BG3739742003155763103155763303Ratregion
5081066RH1419451503162322269162322419Ratregion
5081122RH1419772103167835131167835341Ratregion
5081226RH1420372173158898958158899175Ratregion
5085042AI1052921903153614361153614551Ratregion
5081565AW4339471723153804841153805013Ratregion
5085240AA7996412113152300593152301851Ratregion
5083481BF391413983157633321157633419Ratregion
5083541BF3917161423153223223153223364Ratregion
5083651AI7100812173156941654156941871Ratregion
5083809AA8917092123151654302151654514Ratregion
5083849AI2320571213162667860162667981Ratregion
5083871AA9430272503149416588149416838Ratregion
5083946AI2322791183161770760161770878Ratregion
5503194ksks4351863149414351149414633Ratregion
5503344Tncs3453153513814153514468Ratregion
5507670Hnf42703152226681152227868Ratregion
5507672Hnf42703152226681152227868Ratregion
5503627UniSTS:465392943152226700152226794Ratregion
5504428PMC20311P11483149404957149405306Ratregion
5504256G429331283150189336150189464Ratregion
5504797Hnf4a03152244260152245448Ratregion
5505231Pck1743161933962161934036Ratregion
5505576UniSTS:48494115383161016109161017647Ratregion
5505644UniSTS:48798111063153563366153564472Ratregion
5505510D19S91510323161130658161131690Ratregion
5505955UniSTS:4966763863163135341163136087Ratregion
5506149Mmp9623153685293153685355Ratregion
5506477STS-Z397675893155337564155338153Ratregion
5506140UniSTS:498461703162246377162246414Ratregion
5499513stSG60748414833154172331154173814Ratregion
5499771UniSTS:2345892283149297204149297432Ratregion
5499773UniSTS:234614843157474128157474212Ratregion
5499777UniSTS:2346201103162499964162500074Ratregion
5499779UniSTS:2346242033167018643167018846Ratregion
5501996MARC_23321-23322:1024689677:55123149556395149556907Ratregion
5502363RH1246261463157472956157473102Ratregion
5502805PIGT03153235595153235820Ratregion
5502807TCFL56523167752002167752654Ratregion
5500755D22S11755843161961171161961755Ratregion
5500679RH1366205793167137341167137920Ratregion
5501075PMC133887P23403161929820161930160Ratregion
5501486D7S15197923162719112162719904Ratregion
5501135PMC14794P1783156137394156137472Ratregion
5501135PMC14794P1783156137394156137472Ratregion
5501606RH3940010513162607121162608172Ratregion
5505061Cyp24a18233159278719159279542Ratregion
5502676Adnp3873156895486156895873Ratregion
5502987D2Dcr1161353153683938153684073Ratregion
5507061UniSTS:2242871643153868650153868814Ratregion
5502501RH1251001873153220383153220570Ratregion
Position Markers

Flank 1: (D3Rat145)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23149,040,888 - 149,041,023 (+)MAPPER
Rnor_6.03156,381,661 - 156,381,795NCBI
Rnor_5.03162,615,336 - 162,615,470UniSTS
RGSC_v3.43151,160,532 - 151,160,667RGD
RGSC_v3.43151,160,533 - 151,160,667UniSTS
RGSC_v3.13151,066,442 - 151,066,576RGD
Celera3147,718,594 - 147,718,728UniSTS
RH 3.4 Map31366.7UniSTS
RH 3.4 Map31366.7RGD
SHRSP x BN Map375.5299UniSTS
SHRSP x BN Map375.5299RGD
Peak: (D3Arb12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23153,156,423 - 153,156,701 (+)MAPPER
Rnor_6.03160,874,038 - 160,874,317NCBI
Rnor_5.03167,054,324 - 167,054,603UniSTS
RGSC_v3.43155,447,672 - 155,447,952RGD
RGSC_v3.43155,447,673 - 155,447,952UniSTS
RGSC_v3.13155,353,708 - 155,353,988RGD
Celera3151,767,761 - 151,768,034UniSTS
RH 3.4 Map31426.6UniSTS
RH 3.4 Map31426.6RGD
RH 2.0 Map3980.6RGD
SHRSP x BN Map379.9099RGD
Cytogenetic Map3q42UniSTS
Flank 2: (D3Rat1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23168,026,691 - 168,026,850 (+)MAPPER
Rnor_6.03176,417,943 - 176,418,101NCBI
Rnor_5.03180,127,863 - 180,128,021UniSTS
RGSC_v3.43170,016,309 - 170,016,467UniSTS
RGSC_v3.43170,016,252 - 170,016,653RGD
RGSC_v3.13169,922,345 - 169,922,503RGD
Celera3164,558,222 - 164,558,366UniSTS
RH 3.4 Map31533.2RGD
RH 3.4 Map31533.2UniSTS
RH 2.0 Map31027.1RGD
SHRSP x BN Map391.5299RGD
FHH x ACI Map3104.89RGD
Cytogenetic Map3q43UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145925360166177555Rat
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3145925360166177555Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1300113Bp176Blood pressure QTL 1763.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145956084157309487Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3145925360166177555Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3145925360166177555Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3145925360166177555Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141074471169034231Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3145925360166177555Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
1300161Rf10Renal function QTL 103.57renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)3161192952169034231Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3145956084169034231Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141339236155617360Rat
2317883Alcrsp26Alcohol response QTL 261.80.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)3145526770169034231Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141339013162184794Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3145956084161299569Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)394856903159898684Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
619618Rf3Renal disease susceptibility QTL 36.50.001urine albumin amount (VT:0002871)urine albumin excretion rate to body weight ratio (CMO:0001270)3107693393152693393Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3121056165157309487Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3130193298161695983Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3149040888168026850Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3145925360166177555Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_map Suggestive QTL for neointimal growth were identified on chromosomes RNO3, RNO4, RNO6, RNO15 1578306