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Gene: Snx21 (sorting nexin family member 21) Rattus norvegicus
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Symbol: Snx21
Name: sorting nexin family member 21
Description: Predicted to have phosphatidylinositol-3-phosphate binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in protein transport. Predicted to localize to the early endosome membrane. Orthologous to human SNX21 (sorting nexin family member 21); INTERACTS WITH fipronil; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); all-trans-retinoic acid (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100362940; sorting nexin 21-like; sorting nexin-21
Orthologs:
Homo sapiens (human) : SNX21 (sorting nexin family member 21)  HGNC  Alliance
Mus musculus (house mouse) : Snx21 (sorting nexin family member 21)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx21 (sorting nexin family member 21)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX21 (sorting nexin family member 21)
Canis lupus familiaris (dog) : SNX21 (sorting nexin family member 21)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx21 (sorting nexin family member 21)
Sus scrofa (pig) : SNX21 (sorting nexin family member 21)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03161,252,634 - 161,261,880 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03167,438,430 - 167,446,285 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43155,815,636 - 155,829,250 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3152,130,304 - 152,139,862 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snx21
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2323753
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.