Slc13a3 (solute carrier family 13 member 3)

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Gene: Slc13a3 (solute carrier family 13 member 3) Rattus norvegicus

Analyze

Symbol:

Slc13a3

Name:

solute carrier family 13 member 3

RGD ID:

628786

Description:

Enables carboxylic acid transmembrane transporter activity. Involved in aspartate transmembrane transport; citrate transport; and succinate transmembrane transport. Predicted to be located in basolateral plasma membrane. Orthologous to human SLC13A3 (solute carrier family 13 member 3); INTERACTS WITH (+)-schisandrin B; 1,3-dinitrobenzene; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Na(+)-coupled carboxylate transporter 3; Na(+)/dicarboxylate cotransporter 3; NaC3; naDC-3; Nadc3; rNaDC3; SDCT2; sodium-dependent high-affinity dicarboxylate transporter 2; sodium-dependent high-affinity dicarboxylate transporter 3; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC13A3 (solute carrier family 13 member 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slc13a3 (solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc13a3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC13A3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC13A3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc13a3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC13A3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC13A3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc13a3 (solute carrier family 13 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SLC13A3 (solute carrier family 13 member 3)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc13a3 (solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc13a3 (solute carrier family 13 member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	B0285.6	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	Indy-2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PHO87	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector)
Saccharomyces cerevisiae (baker's yeast):	PHO90	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector)
Drosophila melanogaster (fruit fly):	CG33934	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PHO91	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector)
Caenorhabditis elegans (roundworm):	nac-3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nac-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nac-2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	slc13a3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Candidate Gene For:

Eau4

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	154,141,878 - 154,204,604 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	154,141,872 - 154,204,606 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	157,950,554 - 158,014,103 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	166,449,536 - 166,513,085 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	164,191,155 - 164,254,719 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	162,084,336 - 162,147,398 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	162,084,315 - 162,147,393 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	168,266,585 - 168,329,647 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	156,447,900 - 156,510,620 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	156,353,929 - 156,416,658 (-)	NCBI
Celera	3	152,740,642 - 152,803,198 (-)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Reversible Leukoencephalopathy with Increased Urinary Alpha-ketoglutarate (ISO)

focal epilepsy (ISO)

genetic disease (ISO)

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1,2-dichloroethane (ISO)

1,3-dinitrobenzene (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

4-hydroxyphenyl retinamide (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

7,12-dimethyltetraphene (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

choline (ISO)

cisplatin (ISO)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

cyproconazole (ISO)

dexamethasone (EXP)

dichloroacetic acid (ISO)

diclofenac (ISO)

dieldrin (EXP)

diethylstilbestrol (EXP)

epoxiconazole (ISO)

ethanol (ISO)

ether (EXP)

flutamide (EXP)

folic acid (ISO)

gentamycin (EXP)

glafenine (EXP)

glyphosate (EXP)

graphite (EXP)

GW 4064 (ISO)

indole-3-methanol (EXP)

isoflurane (EXP)

L-methionine (ISO)

lead diacetate (EXP)

levofloxacin (EXP)

lidocaine (EXP)

lipopolysaccharide (ISO)

Monobutylphthalate (EXP)

N-nitrosodiethylamine (EXP,ISO)

nitrofen (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

pentobarbital (EXP)

perfluorooctane-1-sulfonic acid (ISO)

phenformin (EXP)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

pravastatin (ISO)

propanal (ISO)

propiconazole (ISO)

quercetin (ISO)

rotenone (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

succinic acid (EXP,ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (EXP,ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

toluene (EXP)

trichloroethene (EXP,ISO)

Triptolide (EXP,ISO)

trovafloxacin (ISO)

valproic acid (EXP,ISO)

vanadyl sulfate (ISO)

vancomycin (ISO)

vinclozolin (EXP)

zaragozic acid A (EXP,ISO)

zidovudine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

alpha-ketoglutarate transport (IEA)

aspartate transmembrane transport (IDA)

citrate transport (IBA,IDA)

dicarboxylic acid transport (IDA,ISO)

glutathione transmembrane transport (IEA,ISO)

L-aspartate transmembrane transport (IEA)

sodium ion transmembrane transport (IEA)

succinate transmembrane transport (IDA,IEA,ISO)

succinate transport (IDA)

Cellular Component

basolateral plasma membrane (IEA,ISO)

membrane (ISO)

plasma membrane (IEA,ISO)

Molecular Function

alpha-ketoglutarate transmembrane transporter activity (IEA,ISO)

citrate transmembrane transporter activity (IBA,IDA)

dicarboxylic acid transmembrane transporter activity (IDA,ISO)

glutathione transmembrane transporter activity (IEA,ISO)

high-affinity sodium:dicarboxylate symporter activity (IEA,ISO)

L-aspartate transmembrane transporter activity (IDA)

organic acid:sodium symporter activity (IDA)

protein binding (ISO)

sodium:dicarboxylate symporter activity (IBA,IDA,ISO)

solute:sodium symporter activity (IEA)

succinate transmembrane transporter activity (IBA,IDA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Molecular and functional analysis of SDCT2, a novel rat sodium-dependent dicarboxylate transporter.	Chen X, etal., J Clin Invest 1999 Apr;103(8):1159-68.
2.	Transport characteristics of N-acetyl-L-aspartate in rat astrocytes: involvement of sodium-coupled high-affinity carboxylate transporter NaC3/NaDC3-mediated transport system.	Fujita T, etal., J Neurochem. 2005 May;93(3):706-14.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Transport of N-acetylaspartate by the Na(+)-dependent high-affinity dicarboxylate transporter NaDC3 and its relevance to the expression of the transporter in the brain.	Huang W, etal., J Pharmacol Exp Ther. 2000 Oct;295(1):392-403.
5.	Structure, function, and expression pattern of a novel sodium-coupled citrate transporter (NaCT) cloned from mammalian brain.	Inoue K, etal., J Biol Chem 2002 Oct 18;277(42):39469-76.
6.	Primary structure and functional characteristics of a mammalian sodium-coupled high affinity dicarboxylate transporter.	Kekuda R, etal., J Biol Chem 1999 Feb 5;274(6):3422-9.
7.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
8.	GOA pipeline	RGD automated data pipeline
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Functional and molecular identification of sodium-coupled dicarboxylate transporters in rat primary cultured cerebrocortical astrocytes and neurons.	Yodoya E, etal., J Neurochem. 2006 Apr;97(1):162-73. Epub 2006 Mar 8.

Additional References at PubMed

PMID:11287335	PMID:12477932	PMID:19056867	PMID:20813124	PMID:21264516	PMID:22871113	PMID:24247155	PMID:27053689	PMID:30635937

Genomics

Comparative Map Data

Slc13a3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	154,141,878 - 154,204,604 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	154,141,872 - 154,204,606 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	157,950,554 - 158,014,103 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	166,449,536 - 166,513,085 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	164,191,155 - 164,254,719 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	162,084,336 - 162,147,398 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	162,084,315 - 162,147,393 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	168,266,585 - 168,329,647 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	156,447,900 - 156,510,620 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	156,353,929 - 156,416,658 (-)	NCBI
Celera	3	152,740,642 - 152,803,198 (-)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

SLC13A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	46,557,828 - 46,684,485 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	20	46,557,823 - 46,684,467 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	45,186,467 - 45,313,124 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	44,619,870 - 44,746,514 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	44,619,869 - 44,713,505	NCBI
Celera	20	41,897,908 - 42,024,605 (-)	NCBI		Celera
Cytogenetic Map	20	q13.12	ENTREZGENE
HuRef	20	41,927,384 - 42,054,359 (-)	NCBI		HuRef
CHM1_1	20	45,089,076 - 45,216,112 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	48,293,974 - 48,420,764 (-)	NCBI		T2T-CHM13v2.0

Slc13a3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	165,247,215 - 165,315,117 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	165,246,948 - 165,315,150 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	165,405,295 - 165,473,197 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	165,405,028 - 165,473,230 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	165,230,795 - 165,298,697 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	165,096,500 - 165,164,402 (-)	NCBI		MGSCv36	mm8
Celera	2	171,347,492 - 171,415,775 (-)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI

Slc13a3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	10,755,312 - 10,831,900 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	10,755,336 - 10,829,797 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC13A3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	20	52,286,193 - 52,399,047 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	42,890,251 - 43,018,635 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	43,975,373 - 44,101,788 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	43,977,568 - 44,068,886 (-)	Ensembl	panpan1.1		panPan2

SLC13A3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	33,810,594 - 33,884,169 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	33,809,731 - 33,884,139 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	33,269,702 - 33,344,444 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	34,518,068 - 34,593,024 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	34,518,081 - 34,593,006 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	33,775,187 - 33,849,803 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	33,891,902 - 33,966,700 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	34,430,790 - 34,505,677 (-)	NCBI		UU_Cfam_GSD_1.0

Slc13a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	191,100,938 - 191,140,371 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	6,554,608 - 6,592,671 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936514	6,554,605 - 6,594,014 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC13A3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	48,714,183 - 48,792,141 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	48,714,180 - 48,792,280 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	54,563,504 - 54,593,504 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC13A3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	17,233,287 - 17,324,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	17,233,346 - 17,324,951 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	65,843,126 - 65,967,625 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc13a3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	8,028,103 - 8,105,871 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624790	8,028,054 - 8,104,123 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc13a3
454 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	204
Count of miRNA genes:	142
Interacting mature miRNAs:	166
Transcripts:	ENSRNOT00000025843
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	112681431	157681431	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	118839124	163839124	Rat
1598877	Bp285	Blood pressure QTL 285	1.5	0.03	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	120538241	165538241	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	121056165	157309487	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	122438700	167438700	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	124122556	169034231	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	127162703	168026850	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	130193298	161695983	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	130656562	169034231	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	130656562	169034231	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	131635904	169034231	Rat
2298477	Eau4	Experimental allergic uveoretinitis QTL 4		0.0011	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	3	137398739	169034231	Rat
8552952	Pigfal13	Plasma insulin-like growth factor 1 level QTL 13			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	138799500	169034231	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	141074471	169034231	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141339013	162184794	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	141339236	155617360	Rat
2317883	Alcrsp26	Alcohol response QTL 26	1.8	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	3	145526770	169034231	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	145925360	166177555	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	145925360	166177555	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	145925360	166177555	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	145925360	166177555	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	145925360	166177555	Rat
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	145925360	166177555	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	145925360	166177555	Rat
1300113	Bp176	Blood pressure QTL 176	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	145956084	157309487	Rat
1598854	Memor10	Memory QTL 10	2		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	3	145956084	161299569	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	145956084	169034231	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	149040888	168026850	Rat

Markers in Region

RH130357

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	154,142,035 - 154,142,231 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	162,084,494 - 162,084,689	NCBI	Rnor6.0
Rnor_5.0	3	168,266,743 - 168,266,938	UniSTS	Rnor5.0
RGSC_v3.4	3	156,448,058 - 156,448,253	UniSTS	RGSC3.4
Celera	3	152,740,800 - 152,740,995	UniSTS
RH 3.4 Map	3	1394.1	UniSTS
Cytogenetic Map	3	q42	UniSTS

stSG607484

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	154,172,331 - 154,173,814 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	162,114,960 - 162,116,442	NCBI	Rnor6.0
Rnor_5.0	3	168,297,209 - 168,298,691	UniSTS	Rnor5.0
RGSC_v3.4	3	156,478,350 - 156,479,832	UniSTS	RGSC3.4
Celera	3	152,770,573 - 152,772,055	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			20	20		20			35	29	1
Low			26	11	9	11	3	3	25	2	23	8	3
Below cutoff	2	40	11	10	9	10	5	8	14	4	17	2	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF080451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF081825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC129094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000025843 ⟹ ENSRNOP00000025843

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	154,141,872 - 154,204,606 (-)	Ensembl
Rnor_6.0 Ensembl	3	162,084,315 - 162,147,393 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000115401 ⟹ ENSRNOP00000078047

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	154,141,872 - 154,182,056 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000119735 ⟹ ENSRNOP00000096412

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	154,141,872 - 154,204,606 (-)	Ensembl

RefSeq Acc Id:

NM_022866 ⟹ NP_074057

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	154,141,878 - 154,204,604 (-)	NCBI
Rnor_6.0	3	162,084,336 - 162,147,398 (-)	NCBI
Rnor_5.0	3	168,266,585 - 168,329,647 (-)	NCBI
RGSC_v3.4	3	156,447,900 - 156,510,620 (-)	RGD
Celera	3	152,740,642 - 152,803,198 (-)	RGD

Sequence:

show sequence

GGCCGCCCGGTCTCCGGCGATCGCGCGGATGGCGGCGCTGGCGGCGCTGGCCAAGAAGGTGTGG
AGCGCGCGGCGCCTGCTGGTGCTGCTGCTGGTGCCGCTGGCTCTGCTGCCCATTCTCTTCGCCC
TGCCGCCCAAGGAAGGCCGTTGCCTGTATGTCATCTTGCTCATGGCGGTGTATTGGTGCACAGA
GGCCCTGCCCCTGTCAGTGACGGCTCTTCTGCCCATCATCCTCTTCCCCTTCATGGGTATTCTA
CCCTCCAGCAAGGTCTGTCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAGCGGCCTGA
TCATGGCCAGTGCCATTGAGGAACGGAACTTGCACCGGAGAATCGCCCTCAAGGTCCTCATGCT
GGTTGGGGTCCAGCCTGCAAGGCTCATCCTGGGGATGATGGTGACCACGTCATTCCTGTCTATG
TGGCTGAGCAACACGGCTTCCACCGCAATGATGCTGCCCATCGCCAGTGCCATCCTCAAGAGCC
TCTTTGGCCAGCGCGACGCTCGGAAGGACCTTCCCCGGGAAGGCGAGGACAGCACAGCTGCTGT
GCGGGGAAATGGACTTCGAACAGTGCCCACGGAGATGCAGTTTCTCGCCAGTTCAGAAGGAGGC
CACGCTGAGGATGTAGAGGCCCCACTGGAGTTGCCTGATGACTCCAAGGAGGAGGAACATCGCA
GGAACATCTGGAAGGGCTTCCTCATTTCCATTCCCTACTCAGCCAGCATCGGGGGCACCGCCAC
CCTCACAGGCACAGCCCCCAACCTCATCCTGCTCGGCCAGCTCAAGAGTTTCTTTCCACAGTGT
GATGTGGTAAATTTTGGCTCCTGGTTCATCTTTGCCTTCCCTCTCATGCTGCTGTTCCTACTGG
TGGGCTGGCTCTGGATCTCCTTCCTCTACGGTGGAATGAGCTGGAGGGGCTGGAGGAAGAAGAA
CTCGAAGTTACGAGACGTTGCAGAGGATAAGGCTAAAGCTGTGATTCAGGAGGAGTTCCAGAAC
CTAGGGCCCATCAAGTTTGCTGAACAGGCTGTCTTCATCTTGTTCTGCTTGTTTGCCATCCTCC
TCTTCTCCCGGGACCCGAAGTTTATCCCTGGCTGGGCCAGCCTCTTCGCCCCTGGGTTTGTTTC
AGATGCTGTCACCGGTGTGGCCATTGTCACCATCCTGTTCTTCTTCCCTTCCCAGAAGCCCTCA
CTCAAGTGGTGGTTTGACTTCAAAGCTCCCAACTCGGAGACAGAGCCCCTGCTGAGCTGGAAGA
AGGCCCAGGAGACAGTGCCCTGGAATATCATCCTTCTCCTGGGAGGTGGCTTTGCCATGGCCAA
AGGCTGTGAGGAGTCGGGGCTGTCTGCGTGGATCGGTGGGCAGCTGCACCCCCTAGAGCATGTT
CCCCCACTGCTGGCTGTGCTACTCATCACTGTGGTCATCGCCTTCTTCACAGAGTTCGCCAGCA
ACACGGCCACCATCATCATCTTCCTGCCTGTCCTGGCAGAGCTGGCCATCCGACTGCACGTGCA
CCCCTTGTACCTGATGATCCCGGGCACGGTCAGCTGTTCCTACGCCTTCATGCTGCCGGTCTCG
ACGCCCCCCAACTCTATTGCCTTCTCCACTGGACACTTGCTGGTCAAAGACATGGTGCGGACCG
GCCTTCTGATGAACCTGATGGGTGTCCTGCTGCTCAGCCTGGCCATGAACACCTGGGCACAGGC
CATCTTCCAGCTGGGCACCTTCCCAGACTGGGCCAACACCCACGCTGCCAATGTGACCGCACTG
CCACCCGCCTTGACCAACAACACAGTTCAAACCCTCTGAACACTGATGGGGACTTCTTTTTCCG
GCTGGGCGTTCCTCCCAGCGGGTTGTTGCTGTTGTTGCTGCTGGGATCCTACAAGCTGATCGAG
TAATTCTTCCCTGTAATCTGCTAGGAGGCTGCCAGCCAGGTTCCCTGGGCCACAGGCTCACTGT
CTGCAGCGCCTTCTCTTTCTTTCTCATGCATTTCAAAGCTAACTCCTGCACCTGATGCCTGAGG
AACAGGCTTTTCTCACCGAGCTGGTCTGTGGCCACGGTGTGGGGAAAGTCCACTTGAGCCACAA
GCTGAAATGGCGAGGCTGAAGTGGTGTTTGTTTTGCAACACCTAGGGTCGAGGGTATCGAGACA
GGAGGAGCTATGTGACTGCAAAGCTCCAGATGTTACAGATGTTCACAGCTGGCTGGATTCTGCC
TTTTCTGTTTAACCATCTCCCTTGCAGATGATACCTGGCAGCTAGAGGTCGGCTTCCATTGCCT
GAGGCGGAGGGAGTACACAGGTCTTCCTGGAGTCTCTCTGCTGCTTCCCCAATCTCGCAAGCAG
CACACCATGGGGTTTGAAAAACTCCAACTCACACATCTATCCAAGATGCCTGGGATTCTCTTTT
TTTCATCTGATTCTCTTAGGACCAAGCTCTAGGTCAGCCTTGCTCATTATCCTTCTAGGGCCCT
CCTGTCTGTGGCCCTGGGGAGGGGCTCTGTGGCTGCAGACCACCAGCTGTTTTTACTCTAACAA
CTGGGTTTGGCCTCCCCCCCCCCCCCGCCCCACATGATCAGTAAGTTCTATTTGCAAAGGCCAC
AATCTTCAGGGGTGAGAGAAAAATCTGAAAGACGTGGAGACCTGTGAGAAAACCAGGGCAAAGT
ATCTCAGGCCAGAAGTGTGCTGTAACATTGTGACATTGTAACATCCTGCAGATGGAGACCCCAC
CCCCACCCCCAGTCCCCTTCCACCAGAGGCCGAAGCCTGAAAGCAGACAGTTGCTGTCCTTATT
CCCAGTAAAAGCCTCTGATACTCTGCGAACAGCACACTGTGGGGACAGTGGGCAGCTCGGAACT
CGGCTGACACCAGAGGTGGAACCATCACTTCCTCCAGAGGGTGGACATCCGAAGGATGGACACT
TTCTGTTAAGGCACAAGTGAGTCAGAGTATTTTCCCAGAGCTGGGCTGGAGGGGGCCTGAGCTG
GAAGTGACACTGTAAGACTGAGTCAGCACCCCCTGGGTCTGGATAGTGGGATCCCTCAGGGGAC
AAGGACGGGCATACACAGAGAAGACCATGGCCTTGTGACCACAGGATTCATGATTTCTGATACT
GCTGATCCAATATGCGCTCAAATAAATAAAGACTGTTAGTCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_074057	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD16019	(Get FASTA)	NCBI Sequence Viewer
	AAD30657	(Get FASTA)	NCBI Sequence Viewer
	AAI29095	(Get FASTA)	NCBI Sequence Viewer
	EDL96454	(Get FASTA)	NCBI Sequence Viewer
	Q9Z0Z5	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_074057 ⟸ NM_022866

- UniProtKB:

A2VD10 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAALAALAKKVWSARRLLVLLLVPLALLPILFALPPKEGRCLYVILLMAVYWCTEALPLSVTAL
LPIILFPFMGILPSSKVCPQYFLDTNFLFLSGLIMASAIEERNLHRRIALKVLMLVGVQPARLI
LGMMVTTSFLSMWLSNTASTAMMLPIASAILKSLFGQRDARKDLPREGEDSTAAVRGNGLRTVP
TEMQFLASSEGGHAEDVEAPLELPDDSKEEEHRRNIWKGFLISIPYSASIGGTATLTGTAPNLI
LLGQLKSFFPQCDVVNFGSWFIFAFPLMLLFLLVGWLWISFLYGGMSWRGWRKKNSKLRDVAED
KAKAVIQEEFQNLGPIKFAEQAVFILFCLFAILLFSRDPKFIPGWASLFAPGFVSDAVTGVAIV
TILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETVPWNIILLLGGGFAMAKGCEESGLSA
WIGGQLHPLEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGT
VSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQAIFQLGTFPD
WANTHAANVTALPPALTNNTVQTL

hide sequence

RefSeq Acc Id:

ENSRNOP00000025843 ⟸ ENSRNOT00000025843

RefSeq Acc Id:

ENSRNOP00000078047 ⟸ ENSRNOT00000115401

RefSeq Acc Id:

ENSRNOP00000096412 ⟸ ENSRNOT00000119735

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9Z0Z5-F1-model_v2	AlphaFold	Q9Z0Z5	1-600	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692678

Promoter ID:

EPDNEW_R3202

Type:

single initiation site

Name:

Slc13a3_1

Description:

solute carrier family 13 member 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	162,147,403 - 162,147,463	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628786	AgrOrtholog
BioCyc Gene	G2FUF-46799	BioCyc
Ensembl Genes	ENSRNOG00000019118	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000025843	ENTREZGENE
	ENSRNOP00000025843.4	UniProtKB/TrEMBL
	ENSRNOP00000078047.1	UniProtKB/TrEMBL
	ENSRNOP00000096412.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000025843	ENTREZGENE
	ENSRNOT00000025843.6	UniProtKB/TrEMBL
	ENSRNOT00000115401.1	UniProtKB/TrEMBL
	ENSRNOT00000119735.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:8365494	IMAGE-MGC_LOAD
InterPro	SLC13A/DASS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:64846	UniProtKB/TrEMBL
MGC_CLONE	MGC:156643	IMAGE-MGC_LOAD
NCBI Gene	64846	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 13 MEMBER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 13 MEMBER 3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Na_sulph_symp	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc13a3	PhenoGen
UniProt	A0A8I5Y6T4_RAT	UniProtKB/TrEMBL
	A0A8I6AV19_RAT	UniProtKB/TrEMBL
	A2VD10	ENTREZGENE, UniProtKB/TrEMBL
	Q9Z0Z5	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-25	Slc13a3	solute carrier family 13 member 3	Slc13a3	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Slc13a3	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3			Symbol and Name status set to approved	1299863	APPROVED
2003-02-27	Slc13a3				Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	mRNA expression in kidney, liver, and brain	634020

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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