Cass4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 181,580,954 - 181,620,945 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 161,162,520 - 161,202,523 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 161,163,436 - 161,202,186 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 164,973,348 - 165,011,257 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 173,472,367 - 173,510,279 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 171,214,183 - 171,252,098 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 170,398,496 - 170,438,381 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 170,399,302 - 170,438,993 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 176,474,869 - 176,513,806 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 163,305,719 - 163,343,236 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 163,192,753 - 163,249,272 (+) | NCBI | | | | | Celera | 3 | 160,363,902 - 160,401,246 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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CASS4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 56,412,036 - 56,460,382 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 56,412,112 - 56,460,387 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 54,987,092 - 55,035,438 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 54,420,771 - 54,467,243 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 54,420,770 - 54,467,243 | NCBI | | | | | Celera | 20 | 51,727,599 - 51,774,824 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.31 | NCBI | | | | | HuRef | 20 | 51,772,068 - 51,819,214 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 54,888,283 - 54,935,521 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 58,189,527 - 58,237,872 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Cass4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 172,234,998 - 172,275,672 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 172,235,714 - 172,275,677 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 172,393,644 - 172,433,752 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 172,393,794 - 172,433,757 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 172,219,294 - 172,258,360 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 172,084,999 - 172,120,759 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 178,354,514 - 178,390,720 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H3 | NCBI | | | | | cM Map | 2 | 94.85 | NCBI | | | | |
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Cass4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955445 | 2,771,586 - 2,809,952 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955445 | 2,771,130 - 2,809,815 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CASS4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 62,157,220 - 62,207,963 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 62,150,338 - 62,201,081 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 52,749,725 - 52,799,167 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 54,037,046 - 54,084,867 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 54,037,046 - 54,084,867 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CASS4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 41,621,380 - 41,657,843 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 41,622,430 - 41,657,028 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 40,869,541 - 40,905,385 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 42,332,772 - 42,368,262 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 42,332,007 - 42,420,599 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 41,572,557 - 41,608,151 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 41,711,613 - 41,747,445 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 42,369,588 - 42,405,636 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cass4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CASS4 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 17 | 56,991,161 - 57,030,581 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 56,990,774 - 57,032,306 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 64,102,339 - 64,142,463 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CASS4 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 7,663,180 - 7,710,687 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 7,661,522 - 7,710,305 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 55,735,651 - 55,784,890 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cass4 (Heterocephalus glaber - naked mole-rat) |
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