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Gene: Slc9a8 (solute carrier family 9 member A8) Rattus norvegicus

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Symbol:

Slc9a8

Name:

solute carrier family 9 member A8

RGD ID:

1308193

Description:

Enables sodium:proton antiporter activity. Involved in proton transmembrane transport; regulation of intracellular pH; and sodium ion transmembrane transport. Located in apical plasma membrane. Orthologous to human SLC9A8 (solute carrier family 9 member A8); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A; C60 fullerene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC311651; na(+)/H(+) exchanger 8; NHE-8; sodium/hydrogen exchanger 8; solute carrier family 9 (sodium/hydrogen exchanger), member 8; solute carrier family 9 member 8; solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC9A8 (solute carrier family 9 member A8)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slc9a8 (solute carrier family 9 (sodium/hydrogen exchanger), member 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc9a8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC9A8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC9A8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc9a8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC9A8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC9A8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc9a8 (solute carrier family 9 member A8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SPATA24 (spermatogenesis associated 24)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SLC9A8 (solute carrier family 9 member A8)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc9a8 (solute carrier family 9 (sodium/hydrogen exchanger), member 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc9a8 (solute carrier family 9 member 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Nhe1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nhx-8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc9a8	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	176,559,658 - 176,617,510 (+)	NCBI		GRCr8
mRatBN7.2	3	156,147,855 - 156,198,497 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	156,148,104 - 156,198,471 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	159,943,117 - 159,991,034 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	168,442,100 - 168,490,088 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	166,183,800 - 166,231,782 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	164,173,045 - 164,224,747 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	164,174,357 - 164,222,329 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	170,325,978 - 170,375,494 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	158,575,254 - 158,623,901 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	158,481,289 - 158,529,937 (+)	NCBI
Celera	3	154,727,046 - 154,775,719 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

dementia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3-iodothyronamine (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

diquat (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

FR900359 (ISO)

gentamycin (EXP)

GW 4064 (ISO)

iron dichloride (ISO)

maneb (ISO)

methamphetamine (ISO)

methotrexate (ISO)

methoxychlor (EXP)

ochratoxin A (ISO)

ozone (ISO)

paracetamol (EXP)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

quercetin (ISO)

rifampicin (ISO)

temozolomide (ISO)

testosterone (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

vancomycin (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acrosome assembly (ISO,ISS)

cell differentiation (IEA)

monoatomic cation transport (IEA)

monoatomic ion transport (IEA)

potassium ion transmembrane transport (IBA)

proton transmembrane transport (IDA,IEA,ISO)

regulation of Golgi lumen acidification (ISO)

regulation of intracellular pH (IBA,IDA,ISO)

regulation of pH (IEA)

sodium ion transmembrane transport (IDA,IEA,ISO)

sodium ion transport (IEA)

spermatogenesis (IEA)

transmembrane transport (IEA)

Cellular Component

acrosomal vesicle (IEA,ISO,ISS)

apical plasma membrane (IDA,IEA,ISO)

cytoplasmic vesicle (IEA)

endosome (IEA)

Golgi apparatus (IEA)

Golgi membrane (IEA,ISO,ISS)

membrane (IEA)

multivesicular body membrane (IEA,ISO,ISS)

plasma membrane (IEA)

trans-Golgi network membrane (ISO,ISS)

Molecular Function

antiporter activity (IEA)

potassium:proton antiporter activity (IBA,ISO)

protein binding (ISO)

sodium:proton antiporter activity (IBA,IDA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Acid increases NHE8 surface expression and activity in NRK cells.	Joseph C, etal., Am J Physiol Renal Physiol. 2012 Feb 15;302(4):F495-503. doi: 10.1152/ajprenal.00331.2011. Epub 2011 Nov 16.
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Subcloning, localization, and expression of the rat intestinal sodium-hydrogen exchanger isoform 8.	Xu H, etal., Am J Physiol Gastrointest Liver Physiol. 2005 Jul;289(1):G36-41. doi: 10.1152/ajpgi.00552.2004. Epub 2005 Feb 24.
7.	Gastrointestinal distribution and kinetic characterization of the sodium-hydrogen exchanger isoform 8 (NHE8).	Xu H, etal., Cell Physiol Biochem. 2008;21(1-3):109-16. doi: 10.1159/000113752. Epub 2008 Jan 16.

Additional References at PubMed

PMID:15522866	PMID:17581925	PMID:17977906	PMID:19109523	PMID:20375273	PMID:31042050	PMID:34288721

Genomics

Comparative Map Data

Slc9a8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	176,559,658 - 176,617,510 (+)	NCBI		GRCr8
mRatBN7.2	3	156,147,855 - 156,198,497 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	156,148,104 - 156,198,471 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	159,943,117 - 159,991,034 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	168,442,100 - 168,490,088 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	166,183,800 - 166,231,782 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	164,173,045 - 164,224,747 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	164,174,357 - 164,222,329 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	170,325,978 - 170,375,494 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	158,575,254 - 158,623,901 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	158,481,289 - 158,529,937 (+)	NCBI
Celera	3	154,727,046 - 154,775,719 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

SLC9A8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	49,812,828 - 49,892,242 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	49,812,713 - 49,892,242 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	48,429,365 - 48,508,779 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	47,862,657 - 47,942,179 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	20	45,133,843 - 45,213,359 (+)	NCBI		Celera
Cytogenetic Map	20	q13.13	NCBI
HuRef	20	45,177,839 - 45,257,891 (+)	NCBI		HuRef
CHM1_1	20	48,333,933 - 48,413,322 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	51,582,354 - 51,661,679 (+)	NCBI		T2T-CHM13v2.0

Slc9a8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	167,261,678 - 167,318,920 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	167,263,632 - 167,318,920 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	167,421,599 - 167,477,000 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	167,421,712 - 167,477,000 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	167,247,221 - 167,302,498 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	167,112,926 - 167,168,203 (+)	NCBI		MGSCv36	mm8
Celera	2	173,362,588 - 173,418,954 (+)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI
cM Map	2	87.22	NCBI

Slc9a8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	8,312,477 - 8,383,969 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	8,308,847 - 8,384,146 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC9A8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	55,558,722 - 55,638,087 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	55,551,759 - 55,629,351 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	46,155,299 - 46,234,418 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	47,217,765 - 47,296,603 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	47,217,765 - 47,296,603 (+)	Ensembl	panpan1.1		panPan2

SLC9A8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	36,364,053 - 36,434,216 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	36,364,238 - 36,430,000 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	35,605,738 - 35,675,550 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	37,068,734 - 37,137,992 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	37,068,946 - 37,139,800 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	36,309,279 - 36,379,378 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	36,442,826 - 36,512,687 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	36,985,807 - 37,056,011 (+)	NCBI		UU_Cfam_GSD_1.0

Slc9a8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	189,065,155 - 189,141,414 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	4,517,483 - 4,595,019 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	4,518,798 - 4,595,003 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC9A8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	51,401,621 - 51,477,220 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	51,401,061 - 51,477,276 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	57,662,083 - 57,701,512 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC9A8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	14,097,312 - 14,175,002 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	14,101,511 - 14,174,794 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	62,577,193 - 62,654,894 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc9a8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	5,582,176 - 5,645,091 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624790	5,580,655 - 5,644,396 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc9a8
156 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	78
Count of miRNA genes:	66
Interacting mature miRNAs:	73
Transcripts:	ENSRNOT00000012175
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	145925360	166177555	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	145925360	166177555	Rat
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
1300113	Bp176	Blood pressure QTL 176	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	145956084	157309487	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	145925360	166177555	Rat
1598877	Bp285	Blood pressure QTL 285	1.5	0.03	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	120538241	165538241	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	130656562	169034231	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	145925360	166177555	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	145925360	166177555	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	141074471	169034231	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	145925360	166177555	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
2298477	Eau4	Experimental allergic uveoretinitis QTL 4		0.0011	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	3	137398739	169034231	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	145956084	169034231	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
2317883	Alcrsp26	Alcohol response QTL 26	1.8	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	3	145526770	169034231	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	112681431	157681431	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141339013	162184794	Rat
1598854	Memor10	Memory QTL 10	2		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	3	145956084	161299569	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	131635904	169034231	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	122438700	167438700	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	127162703	168026850	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	118839124	163839124	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	121056165	157309487	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	130193298	161695983	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	149040888	168026850	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	130656562	169034231	Rat
8552952	Pigfal13	Plasma insulin-like growth factor 1 level QTL 13			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	138799500	169034231	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	145925360	166177555	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	124122556	169034231	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001025281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC131854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY496958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ210940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000012175 ⟹ ENSRNOP00000012175

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	156,148,104 - 156,198,471 (+)	Ensembl
Rnor_6.0 Ensembl	3	164,174,357 - 164,222,329 (+)	Ensembl

RefSeq Acc Id:

NM_001025281 ⟹ NP_001020452

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,567,125 - 176,615,090 (+)	NCBI
mRatBN7.2	3	156,148,105 - 156,196,077 (+)	NCBI
Rnor_6.0	3	164,174,357 - 164,222,327 (+)	NCBI
Rnor_5.0	3	170,325,978 - 170,375,494 (+)	NCBI
RGSC_v3.4	3	158,575,254 - 158,623,901 (+)	RGD
Celera	3	154,727,046 - 154,775,719 (+)	RGD

Sequence:

show sequence

GTCTCCGAAGCTCGCAGGACTGGGGTGAAGATGGCGGAGGAGTTCTCCAACACGACCCATGAGA
GCTTCAACTTCACCCTTCACACCACTTTGGGTGTCACCACGAAGCTGGTGCTGCCAACACCAGC
CGAGCCTATTCTTCCGGTGCAGACAGGAGAGCAGGCCCAGCAGGAGGAGCAGTCAAGTGGCATG
ACCATTTTCTTCAGCCTTCTCGTCCTAGCCATCTGCATCATCCTGGTGCACCTGCTGATTCGGT
ACCGACTGCACTTCCTGCCTGAGAGCGTGGCTGTTGTTTCTCTAGGCATTCTCATGGGAGCAGT
TATAAAAGTTATAGAGTTTAAGAAGCTGGCAAATTGGAAGGAGGAAGAAATGTTTCGCCCCAAC
ATGTTTTTCCTTCTCTTGCTCCCACCTATCATCTTTGAGTCGGGATACTCACTGCATAAGGGGA
ACTTCTTTCAAAACATTGGCTCCATCACTCTCTTCGCTGTCTTTGGAACAGCAATCTCAGCCTT
TGTAGTAGGTGGAGGAATTTACTTCCTGGGTCAGGCTGATGTAATCTCTAAACTCAACATGACG
GACAGTTTCGCGTTTGGCTCCCTGATATCTGCAGTTGACCCGGTTGCCACTATTGCAATTTTCA
ATGCACTGCACGTGGACCCTGTCCTCAACATGCTGGTGTTTGGAGAAAGCATTCTCAACGATGC
AGTCTCCATTGTCCTCACCAACACGGCTGAAGGTCTAACAAGAAAACATATGTCAGATGTCAGT
GGGTGGCAAACATTCTCACAAGCCCTCGGCTACTTCCTCAAAATGTTCTTTGGCTCTGCAGCGC
TTGGCACGCTGACTGGCTTGATTTCAGCATTAGTGTTGAAGCACATTGACCTGAGGAAGACGCC
TTCCCTGGAGTTTGGCATGATGATCATTTTTGCTTACCTGCCATATGGCCTGGCGGAGGGTATC
TCACTCTCAGGCATCATGGCGATCCTGTTTTCTGGCATCGTGATGTCACACTACACACATCATA
ACCTCTCCCCAGTCACTCAGATCCTCATGCAGCAGACCCTCCGGACTGTGGCCTTCCTGTGTGA
AACATGTGTGTTTGCATTTCTTGGCCTCTCCATTTTTAGTTTCCCTCACAAGTTTGAAATTTCC
TTTGTCATCTGGTGCATAGTGCTGGTTCTGTTCGGCAGAGCTGTCAACATCTTTCCTCTGTCTT
ACCTGCTGAACTTCTTCCGGGATCACAAAATCACCCCCAAGATGATGTTCATCATGTGGTTCAG
TGGTCTTCGAGGGGCCATTCCCTATGCGCTGAGCCTGCATCTGGGTCTGGAGCCCATGGAGAAG
CGCCAGCTCATAGGCACCACCACCATCATCATTGTGCTCTTCACCATCCTGCTGCTGGGCGGCA
GCACCATGCCCCTCATCCGCCTCGTGGACATCGAGGACGCCCGGGCTCGCCGAAGGAGCAAGAA
AGATGTGAACCTCAGCAAGACTGAGAAGATGGGAAATGCTATCGAGTCAGAACACCTGTCTGAG
CTCACTGAGGAGGAGTACGAAGCTCACTACATCAGACAGCAGGACCTCAAAGGCTTCATGTGGT
TGGATGCCAAGTATCTGAACCCCTTCTTTACACGGCGGCTGACACAGGAGGACCTCCATCACGG
GCGTATCCAGATGAAAAGCCTCACCAACAAATGGTATGAGGAGGTCCGTCAGGGACCATCGGGC
TCTGAGGATGATGAGCAGGAGCTGTTCTGAGCCCACAGTGCCTCCCAGAGCCTCCTCAGAACAC
AAGATGGTAGGTCAAGGGCTAGTCCTAGCTAGGAAGCTTCAGGCCTCTGGAGCATGCTGGCTTC
CGAAATGTGATAGGCCTCTATGACTCATGGAACCAGACAGACCCAGGCCAGTGTTGTTCCTGGG
CCTGTAGAGGATGGCAGTCGCCAGCCTCCTCCTGCCTCTCTGCCAGGCCACAGAGAAAACTTTG
GGAGGCTGCTTGCTTATCTCACACCTGTCTGGGCCATGCCTTCCTCACACCTCTGGAGCAGCTG
CTGGCGGGCACATCTGCCATTGTCTCTGAATTGTCAAGGTGCCTTGGTGTCGGCAGCAGCAACT
TCGACCTGTACCAAGGCCAAGAGACTCTGAAGCCGCAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006235645 ⟹ XP_006235707

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,567,037 - 176,617,510 (+)	NCBI
mRatBN7.2	3	156,147,863 - 156,198,497 (+)	NCBI
Rnor_6.0	3	164,173,045 - 164,224,747 (+)	NCBI
Rnor_5.0	3	170,325,978 - 170,375,494 (+)	NCBI

Sequence:

show sequence

AGCTAAATCCCCAACCCTGGTTCATTTAATTTTATCTTGCCTTAATAGCAGGCTTTCCTTGTTC
CTTTGTATAGCCTCAACCCCACAAAGTACATCTCAGCATACAATAGGTCTCTATAGAGAATTTG
GGCATGTTAGCTCAGCAGAAGGATACCTGCCTTCCATGTGTTGCTCTTAGTTCCATCCCTGAAC
AGAAGTAGACAGATACCTGAATGGGGATGGAGCGGGGTATCTCTCACCCTCTAGTCCCAACTAC
TCAAGATGCTGAGAGAGAAGGATCATTTTCTGGGAAAGTGACAGAGCAATCATTTATTACTATC
TTTTAAGCTTTATTAAAGGGGGAAAGAACTACCTAGGGTTGAGGGGCCCCGGAGCACACCCAGA
AAGTTCCATGAAGACCTCAGCAGTTTCAGGCCAGTTTTAAGTAATAGTAAAGACTGTTCAAGTG
TTGAAAGCCCAGGACCTCAGTTAGTATTCCCATTATCCACATAAAAGCCAGGGATGGCTGCTGG
CATCTGTAACCGTAGGGATAGGGAGACTGAGAAGGGAGTATCCCTGGAAGTTGTTGGCTAGCCA
CTATGGCATGTCCCCAGTTTCAGGTTCTGTGTCTCATAAATTAAAGTGGAGCATGAATAAGGAA
GACATCTGATAACCTCGGACTTCCTAGTGTAATCGCCACATACAGGTTAAAAAGAATCTGTTGG
GGTGCCAAGATAGCTCAATGATTAAAGGCGGTGCCGCCAATCTTTACTACCAGAGTTCAATGCC
AAGGATCCACACAGTGTAAGGCGAGAATGAACTCAAGTTGTCCTGGATCTCATTTTCACATATA
ACACACCAACTGGTAAACCTCTGTATTCCTAGTTCTCAACGTTTATACTAGGAGTACACTGTCT
AGCGTTTGCCCTCTGCCTACTCTTCCCAAAGCTGGGAAAACTGAAGCTGACTCGAATGCCTCCA
GACTCCCTCCGCACAGCCTCCCTGGACGCCCAGACACCTCTTCCCCCCATTTTTACCCCCGTGA
TTTCCACGCGGTAAGGACCGCTTTCCAATCACAGCTGAGTCACCAGGATCTCAAAAGTTTCCCC
CAAATCCTTGCCAGGGACCGGAAAAAGTCGTACTGTCCTGAGGGCAGATCGTCGCCTGGCCTGG
CCGGAAAAAGCCTACAGAAAGTCCCCGAAGTCATCCAATTCTCCAGCCACCAAAAGGACGGGGC
AGAGGGCCACCCCGGGAGGCCAAGCCCCGCCCCTGCCCGCAGCGGAAACCGGAAGCAGCCGCAG
GCCCAGCTAGCCCTGCGGCGCCGAACTCTATAGTCTCCGAAGCTCGCAGGACTGGGGTGAAGAT
GGCGGAGGAGTTCTCCAACACGACCCATGAGAGCTTCAACTTCACCCTTCACACCACTTTGGGT
GTCACCACGAAGCTGGTGCTGCCAACACCAGCCAAGCCTATTCTTCCGGTGCAGACAGGAGAGC
AGGCCCAGCAGGAGGAGCAGTCAAGTGGCATGACCATTTTCTTCAGCCTTCTCGTCCTAGCCAT
CTGCATCATCCTGGTGCACCTGCTGATTCGGTACCGACTGCACTTCCTGCCTGAGAGCGTGGCT
GTTGTTTCTCTAGGCATTCTCATGGGAGCAGTTATAAAAGTTATAGAGTTTAAGAAGCTGGCAA
ATTGGAAGGAGGAAGAAATGTTTCGCCCCAACATGTTTTTCCTTCTCTTGCTCCCACCTATCAT
CTTTGAGTCGGGATACTCACTGCATAAGGGGAACTTCTTTCAAAACATTGGCTCCATCACTCTC
TTCGCTGTCTTTGGAACAGCAATCTCAGCCTTTGTAGTAGGTGGAGGAATTTACTTCCTGGGTC
AGGCTGATGTAATCTCTAAACTCAACATGACAGACAGCACGGCTGAAGGTCTAACAAGAAAACA
TATGTCAGATGTCAGTGGGTGGCAAACATTCTCACAAGCCCTCGGCTACTTCCTCAAAATGTTC
TTTGGCTCTGCAGCGCTTGGCACGCTGACTGGCTTGATTTCAGCATTAGTGTTGAAGCACATTG
ACCTGAGGAAGACGCCTTCCCTGGAGTTTGGCATGATGATCATTTTTGCTTACCTGCCATATGG
CCTGGCGGAGGGTATCTCACTCTCAGGCATCATGGCGATCCTGTTTTCTGGCATCGTGATGTCA
CACTACACACATCATAACCTCTCCCCAGTCACTCAGATCCTCATGCAGCAGACCCTCCGGACTG
TGGCCTTCCTGTGTGAAACATGTGTGTTTGCATTTCTTGGCCTCTCCATTTTTAGTTTCCCTCA
CAAGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTGCTGGTTCTGTTCGGCAGAGCTGTCAAC
ATCTTTCCTCTGTCTTACCTGCTGAACTTCTTCCGGGATCACAAAATCACCCCCAAGATGATGT
TCATCATGTGGTTCAGTGGTCTTCGAGGGGCCATTCCCTATGCGCTGAGCCTGCATCTGGGTCT
GGAGCCCATGGAGAAGCGCCAGCTCATAGGCACCACCACCATCATCATTGTGCTCTTCACCATC
CTGCTGCTGGGCGGCAGCACCATGCCCCTCATCCGCCTCGTGGACATCGAGGACGCCCGGGCTC
GCCGAAGGAGCAAGAAAGATGTGAACCTCAGCAAGACTGAGAAGATGGGAAATGCTATCGAGTC
AGAACACCTGTCTGAGCTCACTGAGGAGGAGTACGAAGCTCACTACATCAGACAGCAGGACCTC
AAAGGCTTCATGTGGTTGGATGCCAAGTATCTGAACCCCTTCTTTACACGGCGGCTGACACAGG
AGGACCTCCATCACGGGCGTATCCAGATGAAAAGCCTCACCAACAAATGGTATGAGGAGGTCCG
TCAGGGACCATCGGGCTCTGAGGATGATGAGCAGGAGCTGTTCTGAGCCCACAGTGCCTCCCAG
AGCCTCCTCAGAACACAAGATGGTAGGTCAAGGGCTAGTCCTAGCTAGGAAGCTTCAGGCCTCT
GGAGCATGCTGGCTTCCGAAATGTGATAGGCCTCTATGACTCATGGAACCAGACAGACCCAGGC
CAGTGTTGTTCCTGGGCCTGTAGAGGATGGCAGTCGCCAGCCTCCTCCTGCCTCTCTGCCAGGC
CACAGAGAAAACTTTGGGAGGCTGCTTGCTCATCTCACACCTGTCTGGGCCATGCCTTCCTCAC
ACCTCTGGAGCAGCTGCTGGCGGGCACATCTGCCATTGTCTCTGAATTGTCAAGGTGCCTTGGT
GTCGGCAGCAGCAACTTCGACCTGTACCAAGGCCAAGAGACTCTGAAGCCTCACAGTCCCTGTT
CTGTGTCTTGCACTCCCTAAGAGAAAGACTGAAGGCCTGGTACTTCCAGCCTGCCTTTGGAAAG
GCCGCTATGGCCCACCGTCCTGTGGGCACAATGCAGATGTTTACACTGGTGCCTGGCAGGGGTC
AGCCTGTAGGCTTCCAGGAAAGGTGTTCGCCCATCGCCTGGGCTTGGAGTGTTCTCTGAAGAGA
CAAAATGGAAGCACAGGATCCTTGGGGGCACCTTTCCCAAGTGTGGGAGTCACCTCCATGTCTC
CTCTCCCACCATCTCATCTCTCATTTCTGCCCTCTGTCTCCCCAGTAGCCTCTTTCTAGACCCT
GTAATGTGAAACTCTTTCCATCTACCTGCTCTTCAGAGCCGAGCTTTGTCTTTTACCAATTTCT
GGAGCTCTGCCCTCCATGCTGGGGCCCCAGCTCTCCAAGACACCAGGGCTGTGCTCCCCACTTT
GGCCACTTGGATTCCGGTGACTTTGGGCCACAGAAATACGCACCCATGCATGTCACAGGATAAG
GTGCTGGATCATACCACAGGCAATGGTTGTTGCCTGATGTCCTCACCTGCCCTTTTATAACTGC
TGTCCTCTGCCCATCCGTGGCCCTTTGGCAATTACCCATGTGGCCCTAGTCCCCCATTGTACTC
TGGGTGGCTTAGTTGTGTATGATCCTGACTCACAATGGGGACACAGTGGGCTTTGTTACAGGTG
GTTCTGACCTCAAGTGCTGTGGTTCTGATGTTGGGAAGGTCAACCAGGCCTCTAAGGCCCTGCC
ACCTCACTGTGCTGCAGAACTGGGTGAGGGTGAGGTTGGAAGCATGTAGTTTGCTTCTGTACAT
ACAGTCCTCTTCCTTGGCTCTCACCTTAGCACTGGATCTGGAGCTGCTCTGGCCCTGTGTACTT
TTGGGATAAAGGGGCTGCGCTCAGGCTGGGTTCTTCTCTTTCTCAGAACTCAGGCTCCGTCTTT
GAGATGGAGTCAGGCCACTGTTCAGCTGGCCCCTTGTCTCCAGGTCTCCTGTCCCTGGGACATT
TCTTGGCCTCCTATTTCTATCTGAGACTGAAGCCAGCTTCCCAGAGCACCAGCTCTGTGCACTA
ACTAGTAGGCACCTCTGCCTCTTGCTGGAGGATATAGGCTGAGCACCCTGGGAGACTGCACAGC
CTTTCAAAGCCATTGGCCAGGGAGCAAAGTGCTAGCTGTTTTTCATTGTTCAGATGTTTTACCT
GAGAAACAAACTGTTGCCATCACATCCTCAGACCTGCTAGTGCCGTTGTGTGCAGTTTTGAAGG
CGTAAATGGTACAAGATGCCGTCCCAGTTGTGCTTGGAGTTTCAGGTCTAGGCCAAGGGACAGG
CCAGCTGGGCACACAGAAGGTAATACTTCAGAGTAGGGAGAGACATGGATGCCCCTGGGTATCT
GGCACTTTAGCCAGTGGTACAGGCCACAGAGGTACAGGCCACACGCTGTACCTCCCAGTGGTCC
ATCCCTGCAGCGCATATGAGCCAGGTCTTGGAATCAGTGACAACGCTTTCTGCAGTGCTGTGGT
CACAGGGTCCCTTCAAACAGCCCTGTCCAGCATCTTGACAGGCTGAGGGGCTCGGTGTACAGAT
TTCTTTCTGTGGATGCCAAGAAACTGAGCAGAGAGCCTTCTTAAAACCCACCCTAAGGGCTACC
AGGTCCATGTGCCCATGGTAGGGACCCAGCAGATGCTAGCCTGACCCCTCCTCCCTTAGCTATG
TAGGTACATGTGGTAGAGGTTGGCTGCTCCTGGCTCAAACAGGAGGATCCAGTAGCTGTCTACC
ACCCACCAGGTTTCTAAGATGCCATGTGGAGACGGGGTCCACCCCATTCTCTTCAGAAATAGCA
GCTTGTTTTCTCTGCTGGCATGTGTCCAAGCAGCGAGAGCAGACTGGTAACTGAAAGCACATAG
GAGCATGAGGCAGTGAGAGCCCAGGGGAGGAAGCCTTCTGGTGACCCTGCTTCTGCATCCTGCC
TTCCCAGCTGTCCACCAGTTTCAGAGGAGGTGCCATGCTCCCTCACCCAGGCACCGTCATATGC
AGTGGCTGGCCCTGTTTTAGAGCCATGCAACACAGGCCGGTGAGTGGTAGAGCTGCACTGCTTC
CACAAGGGGAGGCAGAAGGCTCTCCTCACAAGCCTGCTTGCTTTCTTCTCTATCAGTGGAGGGT
TTTGGAAGCCCTAGTTTTCTGCTGTGATTTAGGGAGGCCAGGTTCAAGGTCCCTGGGACCTTTG
CTGCTTTGGGAGGGGCCTGGGGTCTGAGCTAGAGGGAAGCTTGTCACTCTTCGGGAGCTTTCCT
CTTGCCTGTCTGCTCCCCTCACCCCACCGCTGAATTGGGGAGGGGTGTCCCAGGCCACATCACT
GGATAGTTAGAAATAAATTGCTGTGCAATCAAAGCTGA

hide sequence

RefSeq Acc Id:

XM_006235646 ⟹ XP_006235708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,567,146 - 176,617,510 (+)	NCBI
mRatBN7.2	3	156,148,111 - 156,198,497 (+)	NCBI
Rnor_6.0	3	164,173,045 - 164,224,747 (+)	NCBI
Rnor_5.0	3	170,325,978 - 170,375,494 (+)	NCBI

Sequence:

show sequence

AGCTAAATCCCCAACCCTGGTTCATTTAATTTTATCTTGCCTTAATAGCAGGCTTTCCTTGTTC
CTTTGTATAGCCTCAACCCCACAAAGTACATCTCAGCATACAATAGGTCTCTATAGAGAATTTG
GGCATGTTAGCTCAGCAGAAGGATACCTGCCTTCCATGTGTTGCTCTTAGTTCCATCCCTGAAC
AGAAGTAGACAGATACCTGAATGGGGATGGAGCGGGGTATCTCTCACCCTCTAGTCCCAACTAC
TCAAGATGCTGAGAGAGAAGGATCATTTTCTGGGAAAGTGACAGAGCAATCATTTATTACTATC
TTTTAAGCTTTATTAAAGGGGGAAAGAACTACCTAGGGTTGAGGGGCCCCGGAGCACACCCAGA
AAGTTCCATGAAGACCTCAGCAGTTTCAGGCCAGTTTTAAGTAATAGTAAAGACTGTTCAAGTG
TTGAAAGCCCAGGACCTCAGTTAGTATTCCCATTATCCACATAAAAGCCAGGGATGGCTGCTGG
CATCTGTAACCGTAGGGATAGGGAGACTGAGAAGGGAGTATCCCTGGAAGTTGTTGGCTAGCCA
CTATGGCATGTCCCCAGTTTCAGGTTCTGTGTCTCATAAATTAAAGTGGAGCATGAATAAGGAA
GACATCTGATAACCTCGGACTTCCTAGTGTAATCGCCACATACAGGTTAAAAAGAATCTGTTGG
GGTGCCAAGATAGCTCAATGATTAAAGGCGGTGCCGCCAATCTTTACTACCAGAGTTCAATGCC
AAGGATCCACACAGTGTAAGGCGAGAATGAACTCAAGTTGTCCTGGATCTCATTTTCACATATA
ACACACCAACTGGTAAACCTCTGTATTCCTAGTTCTCAACGTTTATACTAGGAGTACACTGTCT
AGCGTTTGCCCTCTGCCTACTCTTCCCAAAGCTGGGAAAACTGAAGCTGACTCGAATGCCTCCA
GACTCCCTCCGCACAGCCTCCCTGGACGCCCAGACACCTCTTCCCCCCATTTTTACCCCCGTGA
TTTCCACGCGGTAAGGACCGCTTTCCAATCACAGCTGAGTCACCAGGATCTCAAAAGTTTCCCC
CAAATCCTTGCCAGGGACCGGAAAAAGTCGTACTGTCCTGAGGGCAGATCGTCGCCTGGCCTGG
CCGGAAAAAGCCTACAGAAAGTCCCCGAAGTCATCCAATTCTCCAGCCACCAAAAGGACGGGGC
AGAGGGCCACCCCGGGAGGCCAAGCCCCGCCCCTGCCCGCAGCGGAAACCGGAAGCAGCCGCAG
GCCCAGCTAGCCCTGCGGCGCCGAACTCTATAGTCTCCGAAGCTCGCAGGACTGGGGTGAAGAT
GGCGGAGGAGTGAGTTCGCTGCTTCGGGTTCTCCAACACGACCCATGAGAGCTTCAACTTCACC
CTTCACACCACTTTGGGTGTCACCACGAAGCTGGTGCTGCCAACACCAGCCAAGCCTATTCTTC
CGGTGCAGACAGGAGAGCAGGCCCAGCAGGAGGAGCAGTCAAGTGGCATGACCATTTTCTTCAG
CCTTCTCGTCCTAGCCATCTGCATCATCCTGGTGCACCTGCTGATTCGGTACCGACTGCACTTC
CTGCCTGAGAGCGTGGCTGTTGTTTCTCTAGGCATTCTCATGGGAGCAGTTATAAAAGTTATAG
AGTTTAAGAAGCTGGCAAATTGGAAGGAGGAAGAAATGTTTCGCCCCAACATGTTTTTCCTTCT
CTTGCTCCCACCTATCATCTTTGAGTCGGGATACTCACTGCATAAGGGGAACTTCTTTCAAAAC
ATTGGCTCCATCACTCTCTTCGCTGTCTTTGGAACAGCAATCTCAGCCTTTGTAGTAGGTGGAG
GAATTTACTTCCTGGGTCAGGCTGATGTAATCTCTAAACTCAACATGACAGACAGTTTCGCGTT
TGGCTCCCTGATATCTGCAGTTGACCCGGTTGCCACTATTGCAATTTTCAATGCACTGCACGTG
GACCCTGTCCTCAACATGCTGGTGTTTGGAGAAAGCATTCTCAACGATGCAGTCTCCATTGTCC
TCACCAACACGGCTGAAGGTCTAACAAGAAAACATATGTCAGATGTCAGTGGGTGGCAAACATT
CTCACAAGCCCTCGGCTACTTCCTCAAAATGTTCTTTGGCTCTGCAGCGCTTGGCACGCTGACT
GGCTTGATTTCAGCATTAGTGTTGAAGCACATTGACCTGAGGAAGACGCCTTCCCTGGAGTTTG
GCATGATGATCATTTTTGCTTACCTGCCATATGGCCTGGCGGAGGGTATCTCACTCTCAGGCAT
CATGGCGATCCTGTTTTCTGGCATCGTGATGTCACACTACACACATCATAACCTCTCCCCAGTC
ACTCAGATCCTCATGCAGCAGACCCTCCGGACTGTGGCCTTCCTGTGTGAAACATGTGTGTTTG
CATTTCTTGGCCTCTCCATTTTTAGTTTCCCTCACAAGTTTGAAATTTCCTTTGTCATCTGGTG
CATAGTGCTGGTTCTGTTCGGCAGAGCTGTCAACATCTTTCCTCTGTCTTACCTGCTGAACTTC
TTCCGGGATCACAAAATCACCCCCAAGATGATGTTCATCATGTGGTTCAGTGGTCTTCGAGGGG
CCATTCCCTATGCGCTGAGCCTGCATCTGGGTCTGGAGCCCATGGAGAAGCGCCAGCTCATAGG
CACCACCACCATCATCATTGTGCTCTTCACCATCCTGCTGCTGGGCGGCAGCACCATGCCCCTC
ATCCGCCTCGTGGACATCGAGGACGCCCGGGCTCGCCGAAGGAGCAAGAAAGATGTGAACCTCA
GCAAGACTGAGAAGATGGGAAATGCTATCGAGTCAGAACACCTGTCTGAGCTCACTGAGGAGGA
GTACGAAGCTCACTACATCAGACAGCAGGACCTCAAAGGCTTCATGTGGTTGGATGCCAAGTAT
CTGAACCCCTTCTTTACACGGCGGCTGACACAGGAGGACCTCCATCACGGGCGTATCCAGATGA
AAAGCCTCACCAACAAATGGTATGAGGAGGTCCGTCAGGGACCATCGGGCTCTGAGGATGATGA
GCAGGAGCTGTTCTGAGCCCACAGTGCCTCCCAGAGCCTCCTCAGAACACAAGATGGTAGGTCA
AGGGCTAGTCCTAGCTAGGAAGCTTCAGGCCTCTGGAGCATGCTGGCTTCCGAAATGTGATAGG
CCTCTATGACTCATGGAACCAGACAGACCCAGGCCAGTGTTGTTCCTGGGCCTGTAGAGGATGG
CAGTCGCCAGCCTCCTCCTGCCTCTCTGCCAGGCCACAGAGAAAACTTTGGGAGGCTGCTTGCT
CATCTCACACCTGTCTGGGCCATGCCTTCCTCACACCTCTGGAGCAGCTGCTGGCGGGCACATC
TGCCATTGTCTCTGAATTGTCAAGGTGCCTTGGTGTCGGCAGCAGCAACTTCGACCTGTACCAA
GGCCAAGAGACTCTGAAGCCTCACAGTCCCTGTTCTGTGTCTTGCACTCCCTAAGAGAAAGACT
GAAGGCCTGGTACTTCCAGCCTGCCTTTGGAAAGGCCGCTATGGCCCACCGTCCTGTGGGCACA
ATGCAGATGTTTACACTGGTGCCTGGCAGGGGTCAGCCTGTAGGCTTCCAGGAAAGGTGTTCGC
CCATCGCCTGGGCTTGGAGTGTTCTCTGAAGAGACAAAATGGAAGCACAGGATCCTTGGGGGCA
CCTTTCCCAAGTGTGGGAGTCACCTCCATGTCTCCTCTCCCACCATCTCATCTCTCATTTCTGC
CCTCTGTCTCCCCAGTAGCCTCTTTCTAGACCCTGTAATGTGAAACTCTTTCCATCTACCTGCT
CTTCAGAGCCGAGCTTTGTCTTTTACCAATTTCTGGAGCTCTGCCCTCCATGCTGGGGCCCCAG
CTCTCCAAGACACCAGGGCTGTGCTCCCCACTTTGGCCACTTGGATTCCGGTGACTTTGGGCCA
CAGAAATACGCACCCATGCATGTCACAGGATAAGGTGCTGGATCATACCACAGGCAATGGTTGT
TGCCTGATGTCCTCACCTGCCCTTTTATAACTGCTGTCCTCTGCCCATCCGTGGCCCTTTGGCA
ATTACCCATGTGGCCCTAGTCCCCCATTGTACTCTGGGTGGCTTAGTTGTGTATGATCCTGACT
CACAATGGGGACACAGTGGGCTTTGTTACAGGTGGTTCTGACCTCAAGTGCTGTGGTTCTGATG
TTGGGAAGGTCAACCAGGCCTCTAAGGCCCTGCCACCTCACTGTGCTGCAGAACTGGGTGAGGG
TGAGGTTGGAAGCATGTAGTTTGCTTCTGTACATACAGTCCTCTTCCTTGGCTCTCACCTTAGC
ACTGGATCTGGAGCTGCTCTGGCCCTGTGTACTTTTGGGATAAAGGGGCTGCGCTCAGGCTGGG
TTCTTCTCTTTCTCAGAACTCAGGCTCCGTCTTTGAGATGGAGTCAGGCCACTGTTCAGCTGGC
CCCTTGTCTCCAGGTCTCCTGTCCCTGGGACATTTCTTGGCCTCCTATTTCTATCTGAGACTGA
AGCCAGCTTCCCAGAGCACCAGCTCTGTGCACTAACTAGTAGGCACCTCTGCCTCTTGCTGGAG
GATATAGGCTGAGCACCCTGGGAGACTGCACAGCCTTTCAAAGCCATTGGCCAGGGAGCAAAGT
GCTAGCTGTTTTTCATTGTTCAGATGTTTTACCTGAGAAACAAACTGTTGCCATCACATCCTCA
GACCTGCTAGTGCCGTTGTGTGCAGTTTTGAAGGCGTAAATGGTACAAGATGCCGTCCCAGTTG
TGCTTGGAGTTTCAGGTCTAGGCCAAGGGACAGGCCAGCTGGGCACACAGAAGGTAATACTTCA
GAGTAGGGAGAGACATGGATGCCCCTGGGTATCTGGCACTTTAGCCAGTGGTACAGGCCACAGA
GGTACAGGCCACACGCTGTACCTCCCAGTGGTCCATCCCTGCAGCGCATATGAGCCAGGTCTTG
GAATCAGTGACAACGCTTTCTGCAGTGCTGTGGTCACAGGGTCCCTTCAAACAGCCCTGTCCAG
CATCTTGACAGGCTGAGGGGCTCGGTGTACAGATTTCTTTCTGTGGATGCCAAGAAACTGAGCA
GAGAGCCTTCTTAAAACCCACCCTAAGGGCTACCAGGTCCATGTGCCCATGGTAGGGACCCAGC
AGATGCTAGCCTGACCCCTCCTCCCTTAGCTATGTAGGTACATGTGGTAGAGGTTGGCTGCTCC
TGGCTCAAACAGGAGGATCCAGTAGCTGTCTACCACCCACCAGGTTTCTAAGATGCCATGTGGA
GACGGGGTCCACCCCATTCTCTTCAGAAATAGCAGCTTGTTTTCTCTGCTGGCATGTGTCCAAG
CAGCGAGAGCAGACTGGTAACTGAAAGCACATAGGAGCATGAGGCAGTGAGAGCCCAGGGGAGG
AAGCCTTCTGGTGACCCTGCTTCTGCATCCTGCCTTCCCAGCTGTCCACCAGTTTCAGAGGAGG
TGCCATGCTCCCTCACCCAGGCACCGTCATATGCAGTGGCTGGCCCTGTTTTAGAGCCATGCAA
CACAGGCCGGTGAGTGGTAGAGCTGCACTGCTTCCACAAGGGGAGGCAGAAGGCTCTCCTCACA
AGCCTGCTTGCTTTCTTCTCTATCAGTGGAGGGTTTTGGAAGCCCTAGTTTTCTGCTGTGATTT
AGGGAGGCCAGGTTCAAGGTCCCTGGGACCTTTGCTGCTTTGGGAGGGGCCTGGGGTCTGAGCT
AGAGGGAAGCTTGTCACTCTTCGGGAGCTTTCCTCTTGCCTGTCTGCTCCCCTCACCCCACCGC
TGAATTGGGGAGGGGTGTCCCAGGCCACATCACTGGATAGTTAGAAATAAATTGCTGTGCAATC
AAAGCTGA

hide sequence

RefSeq Acc Id:

XM_017591797 ⟹ XP_017447286

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,567,037 - 176,617,510 (+)	NCBI
mRatBN7.2	3	156,147,863 - 156,198,497 (+)	NCBI
Rnor_6.0	3	164,173,045 - 164,224,747 (+)	NCBI

Sequence:

show sequence

AGCTAAATCCCCAACCCTGGTTCATTTAATTTTATCTTGCCTTAATAGCAGGCTTTCCTTGTTC
CTTTGTATAGCCTCAACCCCACAAAGTACATCTCAGCATACAATAGGTCTCTATAGAGAATTTG
GGCATGTTAGCTCAGCAGAAGGATACCTGCCTTCCATGTGTTGCTCTTAGTTCCATCCCTGAAC
AGAAGTAGACAGATACCTGAATGGGGATGGAGCGGGGTATCTCTCACCCTCTAGTCCCAACTAC
TCAAGATGCTGAGAGAGAAGGATCATTTTCTGGGAAAGTGACAGAGCAATCATTTATTACTATC
TTTTAAGCTTTATTAAAGGGGGAAAGAACTACCTAGGGTTGAGGGGCCCCGGAGCACACCCAGA
AAGTTCCATGAAGACCTCAGCAGTTTCAGGCCAGTTTTAAGTAATAGTAAAGACTGTTCAAGTG
TTGAAAGCCCAGGACCTCAGTTAGTATTCCCATTATCCACATAAAAGCCAGGGATGGCTGCTGG
CATCTGTAACCGTAGGGATAGGGAGACTGAGAAGGGAGTATCCCTGGAAGTTGTTGGCTAGCCA
CTATGGCATGTCCCCAGTTTCAGGTTCTGTGTCTCATAAATTAAAGTGGAGCATGAATAAGGAA
GACATCTGATAACCTCGGACTTCCTAGTGTAATCGCCACATACAGGTTAAAAAGAATCTGTTGG
GGTGCCAAGATAGCTCAATGATTAAAGGCGGTGCCGCCAATCTTTACTACCAGAGTTCAATGCC
AAGGATCCACACAGTGTAAGGCGAGAATGAACTCAAGTTGTCCTGGATCTCATTTTCACATATA
ACACACCAACTGGTAAACCTCTGTATTCCTAGTTCTCAACGTTTATACTAGGAGTACACTGTCT
AGCGTTTGCCCTCTGCCTACTCTTCCCAAAGCTGGGAAAACTGAAGCTGACTCGAATGCCTCCA
GACTCCCTCCGCACAGCCTCCCTGGACGCCCAGACACCTCTTCCCCCCATTTTTACCCCCGTGA
TTTCCACGCGGTAAGGACCGCTTTCCAATCACAGCTGAGTCACCAGGATCTCAAAAGTTTCCCC
CAAATCCTTGCCAGGGACCGGAAAAAGTCGTACTGTCCTGAGGGCAGATCGTCGCCTGGCCTGG
CCGGAAAAAGCCTACAGAAAGTCCCCGAAGTCATCCAATTCTCCAGCCACCAAAAGGACGGGGC
AGAGGGCCACCCCGGGAGGCCAAGCCCCGCCCCTGCCCGCAGCGGAAACCGGAAGCAGCCGCAG
GCCCAGCTAGCCCTGCGGCGCCGAACTCTATAGTCTCCGAAGCTCGCAGGACTGGGGTGAAGAT
GGCGGAGGAGTTCTCCAACACGACCCATGAGAGCTTCAACTTCACCCTTCACACCACTTTGGGT
GTCACCACGAAGCTGGTGCTGCCAACACCAGCCAAGCCTATTCTTCCGGTGCAGACAGGAGAGC
AGGCCCAGCAGGAGGAGCAGTCAAGTGGCATGACCATTTTCTTCAGCCTTCTCGTCCTAGCCAT
CTGCATCATCCTGGTGCACCTGCTGATTCGGTACCGACTGCACTTCCTGCCTGAGAGCGTGGCT
GTTGTTTCTCTAGGCATTCTCATGGGAGCAGTTATAAAAGTTATAGAGTTTAAGAAGCTGGCAA
ATTGGAAGGAGGAAGAAATGTTTCGCCCCAACATGTTTTTCCTTCTCTTGCTCCCACCTATCAT
CTTTGAGTCGGGATACTCACTGCATAAGGGGAACTTCTTTCAAAACATTGGCTCCATCACTCTC
TTCGCTGTCTTTGGAACAGCAATCTCAGCCTTTGTAGTAGGTGGAGGAATTTACTTCCTGGGTC
AGGCTGATGTAATCTCTAAACTCAACATGACAGACAGTTTCGCGTTTGGCTCCCTGATATCTGC
AGTTGACCCGGTTGCCACTATTGCAATTTTCAATGCACTGCACGTGGACCCTGTCCTCAACATG
CTGGTGTTTGGAGAAAGCATTCTCAACGATGCAGTCTCCATTGTCCTCACCAACACGGCTGAAG
GTCTAACAAGAAAACATATGTCAGATGTCAGTGGGTGGCAAACATTCTCACAAGCCCTCGGCTA
CTTCCTCAAAATGTTCTTTGGCTCTGCAGCGCTTGGCACGCTGACTGGCTTGATTTCAGCATTA
GTGTTGAAGCACATTGACCTGAGGAAGACGCCTTCCCTGGAGTTTGGCATGATGATCATTTTTG
CTTACCTGCCATATGGCCTGGCGGAGGGTATCTCACTCTCAGAAACATGTGTGTTTGCATTTCT
TGGCCTCTCCATTTTTAGTTTCCCTCACAAGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTG
CTGGTTCTGTTCGGCAGAGCTGTCAACATCTTTCCTCTGTCTTACCTGCTGAACTTCTTCCGGG
ATCACAAAATCACCCCCAAGATGATGTTCATCATGTGGTTCAGTGGTCTTCGAGGGGCCATTCC
CTATGCGCTGAGCCTGCATCTGGGTCTGGAGCCCATGGAGAAGCGCCAGCTCATAGGCACCACC
ACCATCATCATTGTGCTCTTCACCATCCTGCTGCTGGGCGGCAGCACCATGCCCCTCATCCGCC
TCGTGGACATCGAGGACGCCCGGGCTCGCCGAAGGAGCAAGAAAGATGTGAACCTCAGCAAGAC
TGAGAAGATGGGAAATGCTATCGAGTCAGAACACCTGTCTGAGCTCACTGAGGAGGAGTACGAA
GCTCACTACATCAGACAGCAGGACCTCAAAGGCTTCATGTGGTTGGATGCCAAGTATCTGAACC
CCTTCTTTACACGGCGGCTGACACAGGAGGACCTCCATCACGGGCGTATCCAGATGAAAAGCCT
CACCAACAAATGGTATGAGGAGGTCCGTCAGGGACCATCGGGCTCTGAGGATGATGAGCAGGAG
CTGTTCTGAGCCCACAGTGCCTCCCAGAGCCTCCTCAGAACACAAGATGGTAGGTCAAGGGCTA
GTCCTAGCTAGGAAGCTTCAGGCCTCTGGAGCATGCTGGCTTCCGAAATGTGATAGGCCTCTAT
GACTCATGGAACCAGACAGACCCAGGCCAGTGTTGTTCCTGGGCCTGTAGAGGATGGCAGTCGC
CAGCCTCCTCCTGCCTCTCTGCCAGGCCACAGAGAAAACTTTGGGAGGCTGCTTGCTCATCTCA
CACCTGTCTGGGCCATGCCTTCCTCACACCTCTGGAGCAGCTGCTGGCGGGCACATCTGCCATT
GTCTCTGAATTGTCAAGGTGCCTTGGTGTCGGCAGCAGCAACTTCGACCTGTACCAAGGCCAAG
AGACTCTGAAGCCTCACAGTCCCTGTTCTGTGTCTTGCACTCCCTAAGAGAAAGACTGAAGGCC
TGGTACTTCCAGCCTGCCTTTGGAAAGGCCGCTATGGCCCACCGTCCTGTGGGCACAATGCAGA
TGTTTACACTGGTGCCTGGCAGGGGTCAGCCTGTAGGCTTCCAGGAAAGGTGTTCGCCCATCGC
CTGGGCTTGGAGTGTTCTCTGAAGAGACAAAATGGAAGCACAGGATCCTTGGGGGCACCTTTCC
CAAGTGTGGGAGTCACCTCCATGTCTCCTCTCCCACCATCTCATCTCTCATTTCTGCCCTCTGT
CTCCCCAGTAGCCTCTTTCTAGACCCTGTAATGTGAAACTCTTTCCATCTACCTGCTCTTCAGA
GCCGAGCTTTGTCTTTTACCAATTTCTGGAGCTCTGCCCTCCATGCTGGGGCCCCAGCTCTCCA
AGACACCAGGGCTGTGCTCCCCACTTTGGCCACTTGGATTCCGGTGACTTTGGGCCACAGAAAT
ACGCACCCATGCATGTCACAGGATAAGGTGCTGGATCATACCACAGGCAATGGTTGTTGCCTGA
TGTCCTCACCTGCCCTTTTATAACTGCTGTCCTCTGCCCATCCGTGGCCCTTTGGCAATTACCC
ATGTGGCCCTAGTCCCCCATTGTACTCTGGGTGGCTTAGTTGTGTATGATCCTGACTCACAATG
GGGACACAGTGGGCTTTGTTACAGGTGGTTCTGACCTCAAGTGCTGTGGTTCTGATGTTGGGAA
GGTCAACCAGGCCTCTAAGGCCCTGCCACCTCACTGTGCTGCAGAACTGGGTGAGGGTGAGGTT
GGAAGCATGTAGTTTGCTTCTGTACATACAGTCCTCTTCCTTGGCTCTCACCTTAGCACTGGAT
CTGGAGCTGCTCTGGCCCTGTGTACTTTTGGGATAAAGGGGCTGCGCTCAGGCTGGGTTCTTCT
CTTTCTCAGAACTCAGGCTCCGTCTTTGAGATGGAGTCAGGCCACTGTTCAGCTGGCCCCTTGT
CTCCAGGTCTCCTGTCCCTGGGACATTTCTTGGCCTCCTATTTCTATCTGAGACTGAAGCCAGC
TTCCCAGAGCACCAGCTCTGTGCACTAACTAGTAGGCACCTCTGCCTCTTGCTGGAGGATATAG
GCTGAGCACCCTGGGAGACTGCACAGCCTTTCAAAGCCATTGGCCAGGGAGCAAAGTGCTAGCT
GTTTTTCATTGTTCAGATGTTTTACCTGAGAAACAAACTGTTGCCATCACATCCTCAGACCTGC
TAGTGCCGTTGTGTGCAGTTTTGAAGGCGTAAATGGTACAAGATGCCGTCCCAGTTGTGCTTGG
AGTTTCAGGTCTAGGCCAAGGGACAGGCCAGCTGGGCACACAGAAGGTAATACTTCAGAGTAGG
GAGAGACATGGATGCCCCTGGGTATCTGGCACTTTAGCCAGTGGTACAGGCCACAGAGGTACAG
GCCACACGCTGTACCTCCCAGTGGTCCATCCCTGCAGCGCATATGAGCCAGGTCTTGGAATCAG
TGACAACGCTTTCTGCAGTGCTGTGGTCACAGGGTCCCTTCAAACAGCCCTGTCCAGCATCTTG
ACAGGCTGAGGGGCTCGGTGTACAGATTTCTTTCTGTGGATGCCAAGAAACTGAGCAGAGAGCC
TTCTTAAAACCCACCCTAAGGGCTACCAGGTCCATGTGCCCATGGTAGGGACCCAGCAGATGCT
AGCCTGACCCCTCCTCCCTTAGCTATGTAGGTACATGTGGTAGAGGTTGGCTGCTCCTGGCTCA
AACAGGAGGATCCAGTAGCTGTCTACCACCCACCAGGTTTCTAAGATGCCATGTGGAGACGGGG
TCCACCCCATTCTCTTCAGAAATAGCAGCTTGTTTTCTCTGCTGGCATGTGTCCAAGCAGCGAG
AGCAGACTGGTAACTGAAAGCACATAGGAGCATGAGGCAGTGAGAGCCCAGGGGAGGAAGCCTT
CTGGTGACCCTGCTTCTGCATCCTGCCTTCCCAGCTGTCCACCAGTTTCAGAGGAGGTGCCATG
CTCCCTCACCCAGGCACCGTCATATGCAGTGGCTGGCCCTGTTTTAGAGCCATGCAACACAGGC
CGGTGAGTGGTAGAGCTGCACTGCTTCCACAAGGGGAGGCAGAAGGCTCTCCTCACAAGCCTGC
TTGCTTTCTTCTCTATCAGTGGAGGGTTTTGGAAGCCCTAGTTTTCTGCTGTGATTTAGGGAGG
CCAGGTTCAAGGTCCCTGGGACCTTTGCTGCTTTGGGAGGGGCCTGGGGTCTGAGCTAGAGGGA
AGCTTGTCACTCTTCGGGAGCTTTCCTCTTGCCTGTCTGCTCCCCTCACCCCACCGCTGAATTG
GGGAGGGGTGTCCCAGGCCACATCACTGGATAGTTAGAAATAAATTGCTGTGCAATCAAAGCTG
A

hide sequence

RefSeq Acc Id:

XM_017591798 ⟹ XP_017447287

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,567,220 - 176,617,510 (+)	NCBI
mRatBN7.2	3	156,148,088 - 156,198,497 (+)	NCBI
Rnor_6.0	3	164,174,439 - 164,224,747 (+)	NCBI

Sequence:

show sequence

CCGGCGGGCGACAGCGGGCCTTGGACGCCCGGGTTCTCCAACACGACCCATGAGAGCTTCAACT
TCACCCTTCACACCACTTTGGGTGTCACCACGAAGCTGGTGCTGCCAACACCAGCCAAGCCTAT
TCTTCCGGTGCAGACAGGAGAGCAGGCCCAGCAGGAGGAGCAGTCAAGTGGCATGACCATTTTC
TTCAGCCTTCTCGTCCTAGCCATCTGCATCATCCTGGTGCACCTGCTGATTCGGTACCGACTGC
ACTTCCTGCCTGAGAGCGTGGCTGTTGTTTCTCTAGGCATTCTCATGGGAGCAGTTATAAAAGT
TATAGAGTTTAAGAAGCTGGCAAATTGGAAGGAGGAAGAAATGTTTCGCCCCAACATGTTTTTC
CTTCTCTTGCTCCCACCTATCATCTTTGAGTCGGGATACTCACTGCATAAGGGGAACTTCTTTC
AAAACATTGGCTCCATCACTCTCTTCGCTGTCTTTGGAACAGCAATCTCAGCCTTTGTAGTAGG
TGGAGGAATTTACTTCCTGGGTCAGGCTGATGTAATCTCTAAACTCAACATGACAGACAGTTTC
GCGTTTGGCTCCCTGATATCTGCAGTTGACCCGGTTGCCACTATTGCAATTTTCAATGCACTGC
ACGTGGACCCTGTCCTCAACATGCTGGTGTTTGGAGAAAGCATTCTCAACGATGCAGTCTCCAT
TGTCCTCACCAACACGGCTGAAGGTCTAACAAGAAAACATATGTCAGATGTCAGTGGGTGGCAA
ACATTCTCACAAGCCCTCGGCTACTTCCTCAAAATGTTCTTTGGCTCTGCAGCGCTTGGCACGC
TGACTGGCTTGATTTCAGCATTAGTGTTGAAGCACATTGACCTGAGGAAGACGCCTTCCCTGGA
GTTTGGCATGATGATCATTTTTGCTTACCTGCCATATGGCCTGGCGGAGGGTATCTCACTCTCA
GGCATCATGGCGATCCTGTTTTCTGGCATCGTGATGTCACACTACACACATCATAACCTCTCCC
CAGTCACTCAGATCCTCATGCAGCAGACCCTCCGGACTGTGGCCTTCCTGTGTGAAACATGTGT
GTTTGCATTTCTTGGCCTCTCCATTTTTAGTTTCCCTCACAAGTTTGAAATTTCCTTTGTCATC
TGGTGCATAGTGCTGGTTCTGTTCGGCAGAGCTGTCAACATCTTTCCTCTGTCTTACCTGCTGA
ACTTCTTCCGGGATCACAAAATCACCCCCAAGATGATGTTCATCATGTGGTTCAGTGGTCTTCG
AGGGGCCATTCCCTATGCGCTGAGCCTGCATCTGGGTCTGGAGCCCATGGAGAAGCGCCAGCTC
ATAGGCACCACCACCATCATCATTGTGCTCTTCACCATCCTGCTGCTGGGCGGCAGCACCATGC
CCCTCATCCGCCTCGTGGACATCGAGGACGCCCGGGCTCGCCGAAGGAGCAAGAAAGATGTGAA
CCTCAGCAAGACTGAGAAGATGGGAAATGCTATCGAGTCAGAACACCTGTCTGAGCTCACTGAG
GAGGAGTACGAAGCTCACTACATCAGACAGCAGGACCTCAAAGGCTTCATGTGGTTGGATGCCA
AGTATCTGAACCCCTTCTTTACACGGCGGCTGACACAGGAGGACCTCCATCACGGGCGTATCCA
GATGAAAAGCCTCACCAACAAATGGTATGAGGAGGTCCGTCAGGGACCATCGGGCTCTGAGGAT
GATGAGCAGGAGCTGTTCTGAGCCCACAGTGCCTCCCAGAGCCTCCTCAGAACACAAGATGGTA
GGTCAAGGGCTAGTCCTAGCTAGGAAGCTTCAGGCCTCTGGAGCATGCTGGCTTCCGAAATGTG
ATAGGCCTCTATGACTCATGGAACCAGACAGACCCAGGCCAGTGTTGTTCCTGGGCCTGTAGAG
GATGGCAGTCGCCAGCCTCCTCCTGCCTCTCTGCCAGGCCACAGAGAAAACTTTGGGAGGCTGC
TTGCTCATCTCACACCTGTCTGGGCCATGCCTTCCTCACACCTCTGGAGCAGCTGCTGGCGGGC
ACATCTGCCATTGTCTCTGAATTGTCAAGGTGCCTTGGTGTCGGCAGCAGCAACTTCGACCTGT
ACCAAGGCCAAGAGACTCTGAAGCCTCACAGTCCCTGTTCTGTGTCTTGCACTCCCTAAGAGAA
AGACTGAAGGCCTGGTACTTCCAGCCTGCCTTTGGAAAGGCCGCTATGGCCCACCGTCCTGTGG
GCACAATGCAGATGTTTACACTGGTGCCTGGCAGGGGTCAGCCTGTAGGCTTCCAGGAAAGGTG
TTCGCCCATCGCCTGGGCTTGGAGTGTTCTCTGAAGAGACAAAATGGAAGCACAGGATCCTTGG
GGGCACCTTTCCCAAGTGTGGGAGTCACCTCCATGTCTCCTCTCCCACCATCTCATCTCTCATT
TCTGCCCTCTGTCTCCCCAGTAGCCTCTTTCTAGACCCTGTAATGTGAAACTCTTTCCATCTAC
CTGCTCTTCAGAGCCGAGCTTTGTCTTTTACCAATTTCTGGAGCTCTGCCCTCCATGCTGGGGC
CCCAGCTCTCCAAGACACCAGGGCTGTGCTCCCCACTTTGGCCACTTGGATTCCGGTGACTTTG
GGCCACAGAAATACGCACCCATGCATGTCACAGGATAAGGTGCTGGATCATACCACAGGCAATG
GTTGTTGCCTGATGTCCTCACCTGCCCTTTTATAACTGCTGTCCTCTGCCCATCCGTGGCCCTT
TGGCAATTACCCATGTGGCCCTAGTCCCCCATTGTACTCTGGGTGGCTTAGTTGTGTATGATCC
TGACTCACAATGGGGACACAGTGGGCTTTGTTACAGGTGGTTCTGACCTCAAGTGCTGTGGTTC
TGATGTTGGGAAGGTCAACCAGGCCTCTAAGGCCCTGCCACCTCACTGTGCTGCAGAACTGGGT
GAGGGTGAGGTTGGAAGCATGTAGTTTGCTTCTGTACATACAGTCCTCTTCCTTGGCTCTCACC
TTAGCACTGGATCTGGAGCTGCTCTGGCCCTGTGTACTTTTGGGATAAAGGGGCTGCGCTCAGG
CTGGGTTCTTCTCTTTCTCAGAACTCAGGCTCCGTCTTTGAGATGGAGTCAGGCCACTGTTCAG
CTGGCCCCTTGTCTCCAGGTCTCCTGTCCCTGGGACATTTCTTGGCCTCCTATTTCTATCTGAG
ACTGAAGCCAGCTTCCCAGAGCACCAGCTCTGTGCACTAACTAGTAGGCACCTCTGCCTCTTGC
TGGAGGATATAGGCTGAGCACCCTGGGAGACTGCACAGCCTTTCAAAGCCATTGGCCAGGGAGC
AAAGTGCTAGCTGTTTTTCATTGTTCAGATGTTTTACCTGAGAAACAAACTGTTGCCATCACAT
CCTCAGACCTGCTAGTGCCGTTGTGTGCAGTTTTGAAGGCGTAAATGGTACAAGATGCCGTCCC
AGTTGTGCTTGGAGTTTCAGGTCTAGGCCAAGGGACAGGCCAGCTGGGCACACAGAAGGTAATA
CTTCAGAGTAGGGAGAGACATGGATGCCCCTGGGTATCTGGCACTTTAGCCAGTGGTACAGGCC
ACAGAGGTACAGGCCACACGCTGTACCTCCCAGTGGTCCATCCCTGCAGCGCATATGAGCCAGG
TCTTGGAATCAGTGACAACGCTTTCTGCAGTGCTGTGGTCACAGGGTCCCTTCAAACAGCCCTG
TCCAGCATCTTGACAGGCTGAGGGGCTCGGTGTACAGATTTCTTTCTGTGGATGCCAAGAAACT
GAGCAGAGAGCCTTCTTAAAACCCACCCTAAGGGCTACCAGGTCCATGTGCCCATGGTAGGGAC
CCAGCAGATGCTAGCCTGACCCCTCCTCCCTTAGCTATGTAGGTACATGTGGTAGAGGTTGGCT
GCTCCTGGCTCAAACAGGAGGATCCAGTAGCTGTCTACCACCCACCAGGTTTCTAAGATGCCAT
GTGGAGACGGGGTCCACCCCATTCTCTTCAGAAATAGCAGCTTGTTTTCTCTGCTGGCATGTGT
CCAAGCAGCGAGAGCAGACTGGTAACTGAAAGCACATAGGAGCATGAGGCAGTGAGAGCCCAGG
GGAGGAAGCCTTCTGGTGACCCTGCTTCTGCATCCTGCCTTCCCAGCTGTCCACCAGTTTCAGA
GGAGGTGCCATGCTCCCTCACCCAGGCACCGTCATATGCAGTGGCTGGCCCTGTTTTAGAGCCA
TGCAACACAGGCCGGTGAGTGGTAGAGCTGCACTGCTTCCACAAGGGGAGGCAGAAGGCTCTCC
TCACAAGCCTGCTTGCTTTCTTCTCTATCAGTGGAGGGTTTTGGAAGCCCTAGTTTTCTGCTGT
GATTTAGGGAGGCCAGGTTCAAGGTCCCTGGGACCTTTGCTGCTTTGGGAGGGGCCTGGGGTCT
GAGCTAGAGGGAAGCTTGTCACTCTTCGGGAGCTTTCCTCTTGCCTGTCTGCTCCCCTCACCCC
ACCGCTGAATTGGGGAGGGGTGTCCCAGGCCACATCACTGGATAGTTAGAAATAAATTGCTGTG
CAATCAAAGCTGA

hide sequence

RefSeq Acc Id:

XM_039105140 ⟹ XP_038961068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,568,905 - 176,617,510 (+)	NCBI
mRatBN7.2	3	156,149,885 - 156,198,497 (+)	NCBI

RefSeq Acc Id:

XM_039105141 ⟹ XP_038961069

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,590,398 - 176,617,510 (+)	NCBI
mRatBN7.2	3	156,171,380 - 156,198,497 (+)	NCBI

RefSeq Acc Id:

XM_063283884 ⟹ XP_063139954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,559,658 - 176,617,510 (+)	NCBI

RefSeq Acc Id:

XM_063283885 ⟹ XP_063139955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,559,658 - 176,617,510 (+)	NCBI

RefSeq Acc Id:

XM_063283887 ⟹ XP_063139957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	176,567,037 - 176,612,068 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001020452	(Get FASTA)	NCBI Sequence Viewer
	XP_006235707	(Get FASTA)	NCBI Sequence Viewer
	XP_006235708	(Get FASTA)	NCBI Sequence Viewer
	XP_017447286	(Get FASTA)	NCBI Sequence Viewer
	XP_017447287	(Get FASTA)	NCBI Sequence Viewer
	XP_038961068	(Get FASTA)	NCBI Sequence Viewer
	XP_038961069	(Get FASTA)	NCBI Sequence Viewer
	XP_063139954	(Get FASTA)	NCBI Sequence Viewer
	XP_063139955	(Get FASTA)	NCBI Sequence Viewer
	XP_063139957	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAS75864	(Get FASTA)	NCBI Sequence Viewer
	EDL96407	(Get FASTA)	NCBI Sequence Viewer
	EDL96408	(Get FASTA)	NCBI Sequence Viewer
	EDL96409	(Get FASTA)	NCBI Sequence Viewer
	EDL96410	(Get FASTA)	NCBI Sequence Viewer
	EDL96411	(Get FASTA)	NCBI Sequence Viewer
	EDL96412	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000012175
	ENSRNOP00000012175.4
	ENSRNOP00000102262
GenBank Protein	Q4L208	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001020452 ⟸ NM_001025281

- UniProtKB:

Q4L208 (UniProtKB/Swiss-Prot), A6JXJ7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEEFSNTTHESFNFTLHTTLGVTTKLVLPTPAEPILPVQTGEQAQQEEQSSGMTIFFSLLVLA
ICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRPNMFFLLLLPPI
IFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLIS
AVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRKHMSDVSGWQTFSQALG
YFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSGIMAILF
SGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEISFVIWCIVLVL
FGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLGLEPMEKRQLIGTTTII
IVLFTILLLGGSTMPLIRLVDIEDARARRRSKKDVNLSKTEKMGNAIESEHLSELTEEEYEAHY
IRQQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKSLTNKWYEEVRQGPSGSEDDEQELF

hide sequence

RefSeq Acc Id:	XP_006235707 ⟸ XM_006235645
- Peptide Label:	isoform X3
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAEEFSNTTHESFNFTLHTTLGVTTKLVLPTPAKPILPVQTGEQAQQEEQSSGMTIFFSLLVLA ICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRPNMFFLLLLPPI IFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSTAEGLTRK HMSDVSGWQTFSQALGYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPY GLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFP HKFEISFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLG LEPMEKRQLIGTTTIIIVLFTILLLGGSTMPLIRLVDIEDARARRRSKKDVNLSKTEKMGNAIE SEHLSELTEEEYEAHYIRQQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKSLTNKWYEEV RQGPSGSEDDEQELF hide sequence

RefSeq Acc Id:	XP_006235708 ⟸ XM_006235646
- Peptide Label:	isoform X4
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRP NMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNM TDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRKHMSDV SGWQTFSQALGYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEG ISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEI SFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLGLEPME KRQLIGTTTIIIVLFTILLLGGSTMPLIRLVDIEDARARRRSKKDVNLSKTEKMGNAIESEHLS ELTEEEYEAHYIRQQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKSLTNKWYEEVRQGPS GSEDDEQELF hide sequence

RefSeq Acc Id:	XP_017447286 ⟸ XM_017591797
- Peptide Label:	isoform X2
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAEEFSNTTHESFNFTLHTTLGVTTKLVLPTPAKPILPVQTGEQAQQEEQSSGMTIFFSLLVLA ICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRPNMFFLLLLPPI IFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNMTDSFAFGSLIS AVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRKHMSDVSGWQTFSQALG YFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSETCVFAF LGLSIFSFPHKFEISFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAI PYALSLHLGLEPMEKRQLIGTTTIIIVLFTILLLGGSTMPLIRLVDIEDARARRRSKKDVNLSK TEKMGNAIESEHLSELTEEEYEAHYIRQQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKS LTNKWYEEVRQGPSGSEDDEQELF hide sequence

RefSeq Acc Id:	XP_017447287 ⟸ XM_017591798
- Peptide Label:	isoform X4
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKVIEFKKLANWKEEEMFRP NMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVGGGIYFLGQADVISKLNM TDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNTAEGLTRKHMSDV SGWQTFSQALGYFLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEG ISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEI SFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFSGLRGAIPYALSLHLGLEPME KRQLIGTTTIIIVLFTILLLGGSTMPLIRLVDIEDARARRRSKKDVNLSKTEKMGNAIESEHLS ELTEEEYEAHYIRQQDLKGFMWLDAKYLNPFFTRRLTQEDLHHGRIQMKSLTNKWYEEVRQGPS GSEDDEQELF hide sequence

Ensembl Acc Id:

ENSRNOP00000012175 ⟸ ENSRNOT00000012175

RefSeq Acc Id:	XP_038961068 ⟸ XM_039105140
- Peptide Label:	isoform X4
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038961069 ⟸ XM_039105141
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063139955 ⟸ XM_063283885
- Peptide Label:	isoform X1
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot), A6JXJ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139954 ⟸ XM_063283884
- Peptide Label:	isoform X1
- UniProtKB:	Q4L208 (UniProtKB/Swiss-Prot), A6JXJ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139957 ⟸ XM_063283887
- Peptide Label:	isoform X5

Protein Domains

Cation/H+ exchanger transmembrane

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4L208-F1-model_v2	AlphaFold	Q4L208	1-575	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692690

Promoter ID:

EPDNEW_R3215

Type:

multiple initiation site

Name:

Slc9a8_1

Description:

solute carrier family 9 member A8

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	164,174,356 - 164,174,416	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308193	AgrOrtholog
BioCyc Gene	G2FUF-46734	BioCyc
Ensembl Genes	ENSRNOG00000008354	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000012175	ENTREZGENE
	ENSRNOT00000012175.5	UniProtKB/TrEMBL
	ENSRNOT00000171647	ENTREZGENE
Gene3D-CATH	6.10.140.1330	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Cation/H_exchanger	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Cation/H_exchanger_CPA1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NaH_exchanger	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:311651	UniProtKB/Swiss-Prot
NCBI Gene	311651	ENTREZGENE
PANTHER	PTHR10110	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SODIUM_HYDROGEN EXCHANGER 8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Na_H_Exchanger	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc9a8	PhenoGen
PRINTS	NAHEXCHNGR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000008354	RatGTEx
UniProt	A6JXJ7	ENTREZGENE, UniProtKB/TrEMBL
	A6JXJ8_RAT	UniProtKB/TrEMBL
	A6JXK0_RAT	UniProtKB/TrEMBL
	A6JXK1_RAT	UniProtKB/TrEMBL
	A6JXK2_RAT	UniProtKB/TrEMBL
	G3V756_RAT	UniProtKB/TrEMBL
	Q4L208	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-01	Slc9a8	solute carrier family 9 member A8	Slc9a8	solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-10-16	Slc9a8	solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8	Slc9a8	solute carrier family 9 (sodium/hydrogen exchanger), member 8	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Slc9a8	solute carrier family 9 (sodium/hydrogen exchanger), member 8	Slc9a8_predicted	solute carrier family 9 (sodium/hydrogen exchanger), member 8 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Slc9a8_predicted	solute carrier family 9 (sodium/hydrogen exchanger), member 8 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD