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Gene: Ift52 (intraflagellar transport 52) Rattus norvegicus
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Symbol: Ift52
Name: intraflagellar transport 52
Description: Predicted to be involved in several processes, including cilium organization; embryonic morphogenesis; and smoothened signaling pathway. Predicted to localize to several cellular components, including the ciliary base; ciliary tip; and microtubule organizing center. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy. Orthologous to human IFT52 (intraflagellar transport 52); INTERACTS WITH bisphenol A; dibutyl phthalate; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: intraflagellar transport 52 homolog; intraflagellar transport 52 homolog (Chlamydomonas); intraflagellar transport protein 52 homolog; LOC362265; RGD1311004; similar to NGD5 protein homolog (CGI-53)
Orthologs:
Homo sapiens (human) : IFT52 (intraflagellar transport 52)  HGNC  Alliance
Mus musculus (house mouse) : Ift52 (intraflagellar transport 52)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift52 (intraflagellar transport 52)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT52 (intraflagellar transport 52)
Canis lupus familiaris (dog) : IFT52 (intraflagellar transport 52)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift52 (intraflagellar transport 52)
Sus scrofa (pig) : IFT52 (intraflagellar transport 52)
Chlorocebus sabaeus (African green monkey) : IFT52 (intraflagellar transport 52)
Heterocephalus glaber (naked mole-rat) : Ift52 (intraflagellar transport 52)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03159,388,868 - 159,413,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3159,392,193 - 159,413,575 (+)Ensembl
Rnor_5.03165,584,941 - 165,608,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43153,896,459 - 153,917,600 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13153,799,163 - 153,822,888 (+)NCBI
Celera3150,329,846 - 150,354,351 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ift52
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311004
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.