Dido1 (death inducer-obliterator 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Dido1 (death inducer-obliterator 1) Rattus norvegicus
Analyze
Symbol: Dido1
Name: death inducer-obliterator 1
RGD ID: 1311173
Description: Predicted to enable metal ion binding activity. Predicted to be involved in DNA-templated transcription. Predicted to act upstream of or within apoptotic signaling pathway. Predicted to be active in nucleus. Orthologous to human DIDO1 (death inducer-obliterator 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Datf1; death associated transcription factor 1; death-inducer obliterator 1; LOC362286
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83188,150,100 - 188,203,445 (-)NCBIGRCr8
mRatBN7.23167,772,535 - 167,825,894 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3167,772,770 - 167,817,218 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03176,162,886 - 176,216,868 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,162,886 - 176,197,753 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03179,862,994 - 179,915,916 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,773,804 - 169,797,391 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13169,650,732 - 169,691,373 (-)NCBI
Celera3164,756,972 - 164,810,015 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (ISO)
aflatoxin B1  (EXP,ISO)
amphetamine  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
benzene  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
benzo[e]pyrene  (ISO)
Benzo[ghi]perylene  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (EXP)
butanal  (ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chrysene  (ISO)
ciguatoxin CTX1B  (ISO)
clobetasol  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
enzyme inhibitor  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
inulin  (ISO)
ivermectin  (ISO)
L-methionine  (ISO)
lead(0)  (ISO)
leflunomide  (ISO)
methapyrilene  (ISO)
methimazole  (EXP)
methylmercury chloride  (ISO)
ochratoxin A  (ISO)
paracetamol  (EXP)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
PhIP  (ISO)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
propiconazole  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tetraphene  (ISO)
titanium dioxide  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (EXP)
triptonide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10393935   PMID:22681889  


Genomics

Comparative Map Data
Dido1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83188,150,100 - 188,203,445 (-)NCBIGRCr8
mRatBN7.23167,772,535 - 167,825,894 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3167,772,770 - 167,817,218 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03176,162,886 - 176,216,868 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,162,886 - 176,197,753 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03179,862,994 - 179,915,916 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,773,804 - 169,797,391 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13169,650,732 - 169,691,373 (-)NCBI
Celera3164,756,972 - 164,810,015 (+)NCBICelera
Cytogenetic Map3q43NCBI
DIDO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382062,877,743 - 62,937,904 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2062,877,738 - 62,937,952 (-)EnsemblGRCh38hg38GRCh38
GRCh372061,509,095 - 61,569,256 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362060,979,535 - 61,039,719 (-)NCBINCBI36Build 36hg18NCBI36
Build 342061,006,799 - 61,016,204NCBI
Celera2058,185,696 - 58,245,931 (-)NCBICelera
Cytogenetic Map20q13.33NCBI
HuRef2058,226,477 - 58,286,320 (-)NCBIHuRef
CHM1_12061,410,099 - 61,470,313 (-)NCBICHM1_1
T2T-CHM13v2.02064,677,856 - 64,738,018 (-)NCBIT2T-CHM13v2.0
Dido1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392180,299,757 - 180,351,886 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2180,299,757 - 180,351,792 (-)EnsemblGRCm39 Ensembl
GRCm382180,657,963 - 180,710,068 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2180,657,964 - 180,709,999 (-)EnsemblGRCm38mm10GRCm38
MGSCv372180,392,669 - 180,444,704 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362180,587,372 - 180,639,407 (-)NCBIMGSCv36mm8
Celera2184,743,521 - 184,795,531 (-)NCBICelera
Cytogenetic Map2H4NCBI
Dido1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555281,162,836 - 1,207,596 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555281,153,181 - 1,207,346 (+)NCBIChiLan1.0ChiLan1.0
DIDO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22168,664,981 - 68,725,218 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12068,658,100 - 68,718,337 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02059,264,759 - 59,325,092 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12060,556,923 - 60,617,265 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2060,556,923 - 60,617,265 (-)Ensemblpanpan1.1panPan2
DIDO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12446,691,117 - 46,735,117 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2446,692,605 - 46,724,505 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2445,875,276 - 45,924,685 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02447,563,695 - 47,612,949 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2447,565,190 - 47,612,947 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12446,661,345 - 46,710,760 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02446,784,621 - 46,833,858 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02447,540,618 - 47,590,068 (-)NCBIUU_Cfam_GSD_1.0
Dido1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640194,917,318 - 194,968,873 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651410,370,959 - 10,403,889 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651410,370,961 - 10,422,484 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIDO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,125,122 - 62,174,071 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,126,026 - 62,174,095 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DIDO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121,285,027 - 1,345,726 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21,285,051 - 1,345,846 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605049,114,402 - 49,175,884 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dido1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474128,646,938 - 28,700,683 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dido1
109 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:82
Count of miRNA genes:65
Interacting mature miRNAs:70
Transcripts:ENSRNOT00000013189, ENSRNOT00000066451
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141074471169034231Rat
2317883Alcrsp26Alcohol response QTL 261.80.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)3145526770169034231Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3145956084169034231Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3149040888168026850Rat
1300161Rf10Renal function QTL 103.57renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)3161192952169034231Rat

Markers in Region
D3Hmgc15  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23167,797,741 - 167,797,959 (+)MAPPERmRatBN7.2
Rnor_6.03176,188,133 - 176,188,350NCBIRnor6.0
Rnor_5.03179,887,926 - 179,888,143UniSTSRnor5.0
RGSC_v3.43169,776,208 - 169,776,425UniSTSRGSC3.4
Celera3164,784,790 - 164,785,007UniSTS
Cytogenetic Map3q43UniSTS
RH133405  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23167,772,596 - 167,772,816 (+)MAPPERmRatBN7.2
Rnor_6.03176,162,948 - 176,163,167NCBIRnor6.0
Rnor_5.03179,863,056 - 179,863,275UniSTSRnor5.0
RGSC_v3.43169,750,680 - 169,750,899UniSTSRGSC3.4
Celera3164,809,734 - 164,809,953UniSTS
Cytogenetic Map3q43UniSTS
BE106785  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23167,795,420 - 167,795,570 (+)MAPPERmRatBN7.2
Rnor_6.03176,185,812 - 176,185,961NCBIRnor6.0
Rnor_5.03179,885,605 - 179,885,754UniSTSRnor5.0
RGSC_v3.43169,773,887 - 169,774,036UniSTSRGSC3.4
Celera3164,787,179 - 164,787,328UniSTS
RH 3.4 Map31525.0UniSTS
Cytogenetic Map3q43UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 32 42 26 19 26 2 2 74 34 40 11 2
Low 11 15 15 15 6 9 1 1 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006224770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006224771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006224772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006235806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006235807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008762596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017592313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039106760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000013189   ⟹   ENSRNOP00000013189
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3167,772,770 - 167,817,218 (-)Ensembl
Rnor_6.0 Ensembl3176,162,886 - 176,197,753 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000113048   ⟹   ENSRNOP00000082610
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3167,772,770 - 167,817,218 (-)Ensembl
RefSeq Acc Id: NM_001427308   ⟹   NP_001414237
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,150,100 - 188,194,823 (-)NCBI
RefSeq Acc Id: XM_006235806   ⟹   XP_006235868
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,150,100 - 188,203,445 (-)NCBI
mRatBN7.23167,772,535 - 167,825,894 (-)NCBI
Rnor_6.03176,162,886 - 176,216,868 (-)NCBI
Rnor_5.03179,862,994 - 179,915,916 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006235807   ⟹   XP_006235869
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,150,100 - 188,193,786 (-)NCBI
mRatBN7.23167,772,535 - 167,807,730 (-)NCBI
Rnor_6.03176,162,886 - 176,198,781 (-)NCBI
Rnor_5.03179,862,994 - 179,915,916 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008762595   ⟹   XP_008760817
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,150,100 - 188,203,383 (-)NCBI
mRatBN7.23167,772,535 - 167,819,845 (-)NCBI
Rnor_6.03176,162,886 - 176,207,643 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008762596   ⟹   XP_008760818
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,158,264 - 188,203,383 (-)NCBI
mRatBN7.23167,780,698 - 167,819,833 (-)NCBI
Rnor_6.03176,170,792 - 176,207,639 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039106760   ⟹   XP_038962688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,150,100 - 188,193,786 (-)NCBI
mRatBN7.23167,772,535 - 167,809,787 (-)NCBI
RefSeq Acc Id: XM_063284235   ⟹   XP_063140305
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,150,100 - 188,203,383 (-)NCBI
RefSeq Acc Id: XM_063284236   ⟹   XP_063140306
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83188,158,264 - 188,203,383 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_006235868   ⟸   XM_006235806
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZXE0 (UniProtKB/TrEMBL),   A6KM85 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006235869   ⟸   XM_006235807
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZXE0 (UniProtKB/TrEMBL),   A6KM85 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008760817   ⟸   XM_008762595
- Peptide Label: isoform X2
- UniProtKB: D3ZWL9 (UniProtKB/TrEMBL),   A6KM85 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008760818   ⟸   XM_008762596
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSRNOP00000013189   ⟸   ENSRNOT00000013189
RefSeq Acc Id: XP_038962688   ⟸   XM_039106760
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZXE0 (UniProtKB/TrEMBL),   A6KM85 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000082610   ⟸   ENSRNOT00000113048
RefSeq Acc Id: XP_063140305   ⟸   XM_063284235
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001414237   ⟸   NM_001427308
- UniProtKB: A0A8I5ZXE0 (UniProtKB/TrEMBL),   A6KM85 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140306   ⟸   XM_063284236
- Peptide Label: isoform X4
Protein Domains
PHD-type   TFIIS central

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZWL9-F1-model_v2 AlphaFold D3ZWL9 1-2219 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311173 AgrOrtholog
BioCyc Gene G2FUF-46323 BioCyc
Ensembl Genes ENSRNOG00000009936 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013189.9 UniProtKB/TrEMBL
  ENSRNOT00000113048.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.472.30 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro DIDO1 UniProtKB/TrEMBL
  SPOC_C UniProtKB/TrEMBL
  TFIIS_cen_dom UniProtKB/TrEMBL
  TFIIS_cen_dom_sf UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report rno:362286 UniProtKB/TrEMBL
NCBI Gene 362286 ENTREZGENE
PANTHER PTHR11477:SF13 UniProtKB/TrEMBL
  TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam PHD UniProtKB/TrEMBL
  SPOC UniProtKB/TrEMBL
  TFIIS_M UniProtKB/TrEMBL
PhenoGen Dido1 PhenoGen
PROSITE TFIIS_CENTRAL UniProtKB/TrEMBL
  ZF_PHD_1 UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000009936 RatGTEx
SMART PHD UniProtKB/TrEMBL
  TFS2M UniProtKB/TrEMBL
Superfamily-SCOP FYVE_PHD_ZnF UniProtKB/TrEMBL
  TFIIS_centre UniProtKB/TrEMBL
UniProt A0A8I5ZXE0 ENTREZGENE, UniProtKB/TrEMBL
  A6KM85 ENTREZGENE, UniProtKB/TrEMBL
  D3ZWL9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-03 Dido1  death inducer-obliterator 1  Datf1_predicted  death associated transcription factor 1 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Datf1_predicted  death associated transcription factor 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED