| 12879876 | Bw182 | Body weight QTL 182 | | 0.003 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 145925360 | 166177555 | Rat |
| 2301411 | Bp320 | Blood pressure QTL 320 | | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 145925360 | 166177555 | Rat |
| 2312673 | Scl63 | Serum cholesterol level QTL 63 | | 0.001 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 3 | 98535255 | 168026850 | Rat |
| 1300113 | Bp176 | Blood pressure QTL 176 | 3.9 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 145956084 | 157309487 | Rat |
| 12879872 | Cm97 | Cardiac mass QTL 97 | | 0.001 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 145925360 | 166177555 | Rat |
| 1598877 | Bp285 | Blood pressure QTL 285 | 1.5 | 0.03 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 120538241 | 165538241 | Rat |
| 1578653 | Vnigr3 | Vascular neointimal growth QTL 3 | 3.1 | | artery morphology trait (VT:0002191) | artery neointimal hyperplastic lesion area (CMO:0001414) | 3 | 130656562 | 169034231 | Rat |
| 12879873 | Cm96 | Cardiac mass QTL 96 | | 0.001 | heart mass (VT:0007028) | heart wet weight to body weight ratio (CMO:0002408) | 3 | 145925360 | 166177555 | Rat |
| 2302373 | Gluco39 | Glucose level QTL 39 | 5.01 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 3 | 98535386 | 161695835 | Rat |
| 12879874 | Cm98 | Cardiac mass QTL 98 | | 0.005 | heart right ventricle mass (VT:0007033) | heart right ventricle weight to body weight ratio (CMO:0000914) | 3 | 145925360 | 166177555 | Rat |
| 1298068 | Bp167 | Blood pressure QTL 167 | | 0.004 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 141074471 | 169034231 | Rat |
| 12879875 | Kidm64 | Kidney mass QTL 64 | | 0.001 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 145925360 | 166177555 | Rat |
| 70216 | Cm14 | Cardiac mass QTL 14 | 2.1 | | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 31172320 | 163586636 | Rat |
| 2298477 | Eau4 | Experimental allergic uveoretinitis QTL 4 | | 0.0011 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 3 | 137398739 | 169034231 | Rat |
| 8552791 | Vie2 | Viral induced encephalitis QTL 2 | 4.1 | | brain integrity trait (VT:0010579) | encephalitis incidence/prevalence measurement (CMO:0002361) | 3 | 145956084 | 169034231 | Rat |
| 61335 | Bp20 | Blood pressure QTL 20 | 3 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 141339236 | 155617360 | Rat |
| 1581568 | Rf53 | Renal function QTL 53 | | | urine total protein amount (VT:0000032) | urine protein excretion rate to body weight ratio (CMO:0001099) | 3 | 56395968 | 161299569 | Rat |
| 2317883 | Alcrsp26 | Alcohol response QTL 26 | 1.8 | 0.63 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 3 | 145526770 | 169034231 | Rat |
| 1578754 | Stresp16 | Stress response QTL 16 | 4 | 0.001 | blood renin amount (VT:0003349) | plasma renin activity level (CMO:0000116) | 3 | 112681431 | 157681431 | Rat |
| 1331726 | Bp208 | Blood pressure QTL 208 | 3.129 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 141339013 | 162184794 | Rat |
| 1598854 | Memor10 | Memory QTL 10 | 2 | | exploratory behavior trait (VT:0010471) | average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) | 3 | 145956084 | 161299569 | Rat |
| 9589106 | Insul23 | Insulin level QTL 23 | 13.86 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 3 | 131635904 | 169034231 | Rat |
| 10755461 | Coatc16 | Coat color QTL 16 | | | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 3 | 122438700 | 167438700 | Rat |
| 8662816 | Vetf4 | Vascular elastic tissue fragility QTL 4 | 4 | | renal artery integrity trait (VT:0010642) | number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563) | 3 | 59242096 | 157323038 | Rat |
| 1559282 | Emca5 | Estrogen-induced mammary cancer QTL 5 | 3.9 | | mammary gland integrity trait (VT:0010552) | percentage of study population developing mammary tumors during a period of time (CMO:0000948) | 3 | 43827364 | 169034231 | Rat |
| 2303620 | Vencon4 | Ventilatory control QTL 4 | 3.9 | | respiration trait (VT:0001943) | tidal volume (CMO:0000222) | 3 | 127162703 | 168026850 | Rat |
| 631841 | Niddm39 | Non-insulin dependent diabetes mellitus QTL 39 | 3.36 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 3 | 94856903 | 159898684 | Rat |
| 1576306 | Schws3 | Schwannoma susceptibility QTL 3 | | 0.001 | nervous system integrity trait (VT:0010566) | percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) | 3 | 118839124 | 163839124 | Rat |
| 619618 | Rf3 | Renal disease susceptibility QTL 3 | 6.5 | 0.001 | urine albumin amount (VT:0002871) | urine albumin excretion rate to body weight ratio (CMO:0001270) | 3 | 107693393 | 152693393 | Rat |
| 1300159 | Kidm4 | Kidney mass QTL 4 | 3.83 | | kidney mass (VT:0002707) | right kidney wet weight to body weight ratio (CMO:0001953) | 3 | 121056165 | 157309487 | Rat |
| 2301971 | Cm71 | Cardiac mass QTL 71 | 4.63 | | heart left ventricle mass (VT:0007031) | heart left ventricle weight (CMO:0000776) | 3 | 41874578 | 155617519 | Rat |
| 2312659 | Slep7 | Serum leptin concentration QTL 7 | | 0.001 | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 3 | 98535255 | 168026850 | Rat |
| 631673 | Iddm13 | Insulin dependent diabetes mellitus QTL 13 | 1.3 | 0.663 | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 3 | 130193298 | 161695983 | Rat |
| 2301970 | Bw81 | Body weight QTL 81 | 5.19 | | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 41874578 | 155617519 | Rat |
| 1578666 | Vnigr1 | Vascular neointimal growth QTL 1 | 4.6 | | artery morphology trait (VT:0002191) | artery lumen area (CMO:0001409) | 3 | 149040888 | 168026850 | Rat |
| 1578656 | Vnigr2 | Vascular neointimal growth QTL 2 | 4.2 | | artery morphology trait (VT:0002191) | lesioned artery residual lumen area (CMO:0001417) | 3 | 130656562 | 169034231 | Rat |
| 8552952 | Pigfal13 | Plasma insulin-like growth factor 1 level QTL 13 | | | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 3 | 138799500 | 169034231 | Rat |
| 12879871 | Am7 | Aortic mass QTL 7 | | 0.001 | aorta mass (VT:0002845) | aorta weight to aorta length to body weight ratio (CMO:0002722) | 3 | 145925360 | 166177555 | Rat |
| 631541 | Bp81 | Blood pressure QTL 81 | 4 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 124122556 | 169034231 | Rat |
| 2312670 | Bw94 | Body weight QTL 94 | | 0.01 | inguinal fat pad mass (VT:0010424) | inguinal fat pad weight to body weight ratio (CMO:0001253) | 3 | 98535255 | 168026850 | Rat |
