Gene: Ctcfl (CCCTC-binding factor like) Rattus norvegicus
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Symbol: Ctcfl
Name: CCCTC-binding factor like
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone binding (ortholog); INVOLVED IN DNA methylation involved in gamete generation (ortholog); histone methylation (ortholog); positive regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 4-vinylcyclohexene dioxide (ortholog); arsane (ortholog)
Type: protein-coding
RefSeq Status: INFERRED
Also known as: CCCTC-binding factor (zinc finger protein)-like; LOC100360757; LOC296420; transcriptional repressor CTCFL
Orthologs:
Homo sapiens (human) : CTCFL (CCCTC-binding factor like)  HGNC  Alliance
Mus musculus (house mouse) : Ctcfl (CCCTC-binding factor (zinc finger protein)-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ctcfl (CCCTC-binding factor like)
Pan paniscus (bonobo/pygmy chimpanzee) : CTCFL (CCCTC-binding factor like)
Canis lupus familiaris (dog) : CTCFL (CCCTC-binding factor like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ctcfl (CCCTC-binding factor like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03171,145,203 - 171,168,375 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03177,211,373 - 177,233,853 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43163,952,971 - 163,973,834 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13163,857,327 - 163,914,593 (-)NCBI
Celera3161,061,586 - 161,084,222 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ctcfl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2321501
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2018-11-20
Status: ACTIVE