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Gene: Sall4 (spalt-like transcription factor 4) Rattus norvegicus
Symbol: Sall4
Name: spalt-like transcription factor 4
RGD ID: 1597672
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific; transcription factor binding activity; and transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including chordate embryonic development; embryonic limb morphogenesis; and regulation of transcription by RNA polymerase II. Predicted to localize to heterochromatin; nucleoplasm; and protein-containing complex. Human ortholog(s) of this gene implicated in Duane retraction syndrome; Duane-radial ray syndrome; Holt-Oram syndrome; IVIC syndrome; and ventricular septal defect. Orthologous to human SALL4 (spalt like transcription factor 4); INTERACTS WITH bisphenol A; 17beta-estradiol (ortholog); 2,3',4,4',5-Pentachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC686412; sal-like 4; sal-like 4 (Drosophila); sal-like protein 4; similar to sal-like 4 isoform a
Homo sapiens (human) : SALL4 (spalt like transcription factor 4)  HGNC  Alliance
Mus musculus (house mouse) : Sall4 (spalt like transcription factor 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sall4 (spalt like transcription factor 4)
Pan paniscus (bonobo/pygmy chimpanzee) : SALL4 (spalt like transcription factor 4)
Canis lupus familiaris (dog) : SALL4 (spalt like transcription factor 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sall4 (spalt like transcription factor 4)
Sus scrofa (pig) : SALL4 (spalt like transcription factor 4)
Chlorocebus sabaeus (African green monkey) : SALL4 (spalt like transcription factor 4)
Heterocephalus glaber (naked mole-rat) : Sall4 (spalt like transcription factor 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.03165,520,155 - 165,538,176 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3165,520,392 - 165,537,940 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03171,656,504 - 171,674,423 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3156,038,840 - 156,055,436 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Sall4
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1597672
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-11-24
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.