Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Slc17a9 (solute carrier family 17 member 9) Rattus norvegicus
Analyze
Symbol: Slc17a9
Name: solute carrier family 17 member 9
RGD ID: 1311940
Description: Predicted to have transmembrane transporter activity. Predicted to be involved in anion transport. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in porokeratosis. Orthologous to human SLC17A9 (solute carrier family 17 member 9); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC362287; LOC362287; RGD1311940; similar to bA305P22.2.1 (novel protein, isoform 1); solute carrier family 17 (vesicular nucleotide transporter), member 9; solute carrier family 17, member 9
Orthologs:
Homo sapiens (human) : SLC17A9 (solute carrier family 17 member 9)  HGNC  Alliance
Mus musculus (house mouse) : Slc17a9 (solute carrier family 17, member 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc17a9 (solute carrier family 17 member 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC17A9 (solute carrier family 17 member 9)
Canis lupus familiaris (dog) : SLC17A9 (solute carrier family 17 member 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc17a9 (solute carrier family 17 member 9)
Sus scrofa (pig) : SLC17A9 (solute carrier family 17 member 9)
Chlorocebus sabaeus (African green monkey) : SLC17A9 (solute carrier family 17 member 9)
Heterocephalus glaber (naked mole-rat) : Slc17a9 (solute carrier family 17 member 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03176,228,433 - 176,246,971 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,230,378 - 176,246,953 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03179,929,180 - 179,946,174 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,820,567 - 169,837,283 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13169,726,638 - 169,742,785 (+)NCBI
Celera3164,726,946 - 164,743,476 (-)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc17a9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311940
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.