Rf10 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Rf10 (Renal function QTL 10) Rattus norvegicus

Symbol: Rf10
Name: Renal function QTL 10
RGD ID: 1300161
Previously known as: Specialized Center of Research QTL 65; SCOR65
Trait: renal blood flow trait   (VT:2000006)    
Measurement Type: absolute change in renal vascular resistance   (CMO:0001900)    
LOD Score: 3.57
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23161,192,952 - 169,034,231RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.03170,428,815 - 177,699,992RGD_MAPPER_PIPELINERnor6.0
Rnor_5.03176,504,241 - 183,740,530RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.43163,335,007 - 171,063,335RGDRGSC3.4
RGSC_v3.13163,241,044 - 167,072,217RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.
Related QTLs

Related QTL Description Reference
Rf12 interacts with RGD:727992
Kidm4 interacts with RGD:727992
Rf11 interacts with RGD:727992


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1310643Cass4Cas scaffold protein family member 43161162520161202523Rat
1311072Rtfdc1replication termination factor 2 domain containing 13161208005161237687Rat
7496421Gcnt7glucosaminyl (N-acetyl) transferase family member 73161218985161223039Rat
1307805Fam209family with sequence similarity 2093161240062161241747Rat
41352723LOC120102103small Cajal body-specific RNA 23161253399161253638Rat
1303185Tfap2ctranscription factor AP-2 gamma3161315114161322998Rat
41332896LOC120101815uncharacterized LOC1201018153161476609161487216Rat
7515725LOC102550368uncharacterized LOC1025503683161502691161504794Rat
620743Bmp7bone morphogenetic protein 73161639915161716938Rat
1306454Spo11SPO11 initiator of meiotic double strand breaks3161755299161770930Rat
1311540Rae1ribonucleic acid export 13161779096161794048Rat
1308503Rbm38RNA binding motif protein 383161801577161814381Rat
7673981LOC102550425uncharacterized LOC1025504253161845183161847728Rat
621131Uchl3-ps1ubiquitin C-terminal hydrolase L3, pseudogene 13161856954161857835Rat
2321501Ctcfl1CCCTC-binding factor like 13161868306161890949Rat
9103386LOC103691985ubiquitin-60S ribosomal protein L40 pseudogene3161891688161913507Rat
3267Pck1phosphoenolpyruvate carboxykinase 13161930256161936205Rat
41024328LOC120101816uncharacterized LOC1201018163161954459161958941Rat
7736453LOC102550673uncharacterized LOC1025506733161959231161965399Rat
619956Zbp1Z-DNA binding protein 13161993351162009297Rat
1308255Pmepa1prostate transmembrane protein, androgen induced 13162011884162060343Rat
11445912LOC108350627uncharacterized LOC1083506273162128529162131088Rat
41020078LOC120101817uncharacterized LOC1201018173162151965162153635Rat
11512891LOC108350535uncharacterized LOC1083505353162206689162216042Rat
9145180LOC103691986uncharacterized LOC1036919863162231094162259054Rat
41349051Capg-ps1capping actin protein, gelsolin like, pseudogene 13162244122162249867Rat
41209988Rnu6-1162RNA, U6 small nuclear 11623162314531162314628Rat
1589960Cimip1ciliary microtubule inner protein 13162315542162322456Rat
9091054Ankrd60ankyrin repeat domain 603162365158162376491Rat
41262199Eif4e-ps9eukaryotic translation initiation factor 4E, pseudogene 93162385449162420625Rat
1311959Rab22aRAB22A, member RAS oncogene family3162459727162506129Rat
68326VapbVAMP associated protein B and C3162535974162578747Rat
1562045Apcdd1lAPC down-regulated 1 like3162587484162658362Rat
1309423Stx16syntaxin 163162853764162882489Rat
1311351Npepl1aminopeptidase-like 13162893932162906491Rat
2325345Mir296microRNA 2963163051838163051915Rat
2325373Mir298microRNA 2983163052291163052372Rat
2716GnasGNAS complex locus3163071003163136350Rat
7611139LOC102548488uncharacterized LOC1025484883163073058163083901Rat
1590753Nelfcdnegative elongation factor complex member C/D3163213765163224886Rat
708479Ctszcathepsin Z3163224875163235645Rat
1589557Tubb1tubulin, beta 1 class VI3163247990163257460Rat
621374Atp5f1eATP synthase F1 subunit epsilon3163259072163261974Rat
1594395Prelid3bPRELI domain containing 3B3163263059163271055Rat
1565819Zfp831zinc finger protein 8313163393787163510654Rat
11404047LOC10835054640S ribosomal protein S15 pseudogene3163450071163450996Rat
6497120Stmnl-ps3stathmin like, pseudogene 33163522046163522505Rat
2534Edn3endothelin 33163562307163586636Rat
7587488Zfp431l5zinc finger protein 431 like 53163859444163896384Rat
41179636Zfp873l3zinc finger protein 873 like 33163957222163996393Rat
41261584Zfp951-ps3zinc finger protein 951, pseudogene 33164012218164036016Rat
41211592LOC120101823zinc finger protein 431-like3164054719164069284Rat
41325508LOC120101708zinc finger protein 431-like3164095206164099787Rat
7593822Znf431l9zinc finger protein 431 like 93164123501164136267Rat
7615043Zfp931l1zinc finger protein 931 like 13164153061164177043Rat
7617673Zfp970lzinc finger protein 970 like3164181072164194064Rat
7644011Zfp950l10zinc finger protein 950 like 103164203387164215285Rat
7607116Zfp931l2zinc finger protein 931 like 23164259160164291122Rat
40961274LOC120093132zinc finger protein 700-like3164281711164287090Rat
9125638LOC103691992uncharacterized LOC1036919923164305929164357155Rat
41095601LOC120101824zinc finger protein 700-like3164329122164334501Rat
7607434Znf431l-ps2zinc finger protein 431 like, pseudogene 23164421968164437948Rat
41063237Zfp709-ps1zinc finger protein 709, pseudogene 13164457362164474349Rat
41258105LOC120101826zinc finger protein 431-like3164541157164563235Rat
7715755Zfp938lzinc finger protein 938 like3164610572164633349Rat
1587564LOC689816similar to ribosomal protein L243164689113164689645Rat
6489349Zfp931zinc finger protein 9313164707872164792678Rat
76532713300002I08Rikl2RIKEN cDNA 3300002I08 gene like 23164792547164812760Rat
9385968Rpl39-ps3ribosomal protein L39, pseudogene 33164891223164891378Rat
41280912Zfp873l2zinc finger protein 873 like 23164917106164922371Rat
7674516LOC102551102zinc finger protein 120-like3164938968164944655Rat
9248290LOC103692008zinc finger protein 431-like3164984587164995765Rat
11365897Zfp873l1zinc finger protein 873 like 13164991547164993910Rat
1587549Gapdh-ps36Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 363165005060165005645Rat
7645005Zfp931l4zinc finger protein 931 like 43165093906165099686Rat
1587295Rpl7-ps15ribosomal protein L7, pseudogene 153165188160165189004Rat
1587343Rpl7a-ps1ribosomal protein L7a, pseudogene 13165194268165195114Rat
1303029Phactr3phosphatase and actin regulator 33165205247165423692Rat
41350938LOC12010182760S ribosomal protein L19-like3165390485165391421Rat
69429Sycp2synaptonemal complex protein 23165431715165502134Rat
1589983Akr1b1-ps3aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 33165488676165490021Rat
1586306Ppp1r3dprotein phosphatase 1, regulatory subunit 3D3165502384165505455Rat
1311952Fam217bfamily with sequence similarity 217, member B3165505574165515273Rat
1311632Cdh26cadherin 263165520523165573191Rat
7691681LOC102555003uncharacterized LOC1025550033165578743165581126Rat
41352777LOC120101828uncharacterized LOC1201018283165587526165602249Rat
2319699Tada3-ps3transcriptional adaptor 3, pseudogene 33166105386166177242Rat
7700261LOC102554907uncharacterized LOC1025549073166346012166366449Rat
40989414LOC120101830uncharacterized LOC1201018303166362812166363812Rat
41322323Rpl8-ps3ribosomal protein L8, pseudogene 33166446064166450941Rat
621091Cdh4cadherin 43166525092167003380Rat
1588072Taf4TATA-box binding protein associated factor 43167017992167083413Rat
40948732LOC120102111U2 spliceosomal RNA3167099578167099736Rat
1563798Lsm14bLSM family member 14B3167125633167136417Rat
61851Psma7proteasome 20S subunit alpha 73167137279167143626Rat
621847Ss18l1SS18L1 subunit of BAF chromatin remodeling complex3167143730167165253Rat
1359243Mtg2mitochondrial ribosome-associated GTPase 23167165542167181358Rat
620630Hrh3histamine receptor H33167191551167196642Rat
1311312Osbpl2oxysterol binding protein-like 23167210945167256219Rat
41234152LOC120101831uncharacterized LOC1201018313167251785167265332Rat
69248Adrm1ADRM1 26S proteasome ubiquitin receptor3167265435167270197Rat
621023Lama5laminin subunit alpha 53167270296167318370Rat
621038Rps21ribosomal protein S213167346437167347459Rat
1310089Cables2Cdk5 and Abl enzyme substrate 23167347527167362274Rat
1596090Rbbp8nlRBBP8 N-terminal like3167364048167378993Rat
1561365Gata5GATA binding protein 53167418563167426751Rat
7633259LOC102552888uncharacterized LOC1025528883167478009167483967Rat
11475968LOC108350538uncharacterized LOC1083505383167483967167558889Rat
9685084Mir1bmicroRNA 1b3167487117167487201Rat
620228Slco4a1solute carrier organic anion transporter family, member 4a13167559177167578307Rat
7661482LOC102552550uncharacterized LOC1025525503167582503167591218Rat
1306076Ntsr1neurotensin receptor 13167606215167656371Rat
127284715LOC12162783760S ribosomal protein L17-like3167631958167632564Rat
1308612MrgbpMRG domain binding protein3167697129167700592Rat
69324Ogfropioid growth factor receptor3167703173167709459Rat
1310255Col9a3collagen type IX alpha 3 chain3167711776167734468Rat
1305899Tcfl5transcription factor like 53167734471167754174Rat
1596014Atp5mf-ps2ATP synthase membrane subunit f, pseudogene 23167761524167761976Rat
1311173Dido1death inducer-obliterator 13167772535167825894Rat
735024Gid8GID complex subunit 8 homolog3167826006167836759Rat
1311940Slc17a9solute carrier family 17 member 93167839246167857462Rat
1559760Bhlhe23basic helix-loop-helix family, member e233167889009167891223Rat
41182488LOC120101832uncharacterized LOC1201018323167997376168004204Rat
2325458Mir124-3microRNA 124-33168014952168015038Rat
1308932Ythdf1YTH N6-methyladenosine RNA binding protein F13168024660168040172Rat
1562883Birc7baculoviral IAP repeat-containing 73168047824168052606Rat
1305809Nkain4Sodium/potassium transporting ATPase interacting 43168053294168073944Rat
708452Arfgap1ARF GTPase activating protein 13168084560168099948Rat
1563901Col20a1collagen type XX alpha 1 chain3168102475168134759Rat
2346Chrna4cholinergic receptor nicotinic alpha 4 subunit3168136246168157839Rat
621504Kcnq2potassium voltage-gated channel subfamily Q member 23168194776168253831Rat
3781Eef1a2eukaryotic translation elongation factor 1 alpha 23168265893168275071Rat
1310660Ppdpfpancreatic progenitor cell differentiation and proliferation factor3168299309168301040Rat
1309098Ptk6protein tyrosine kinase 63168307073168315664Rat
1306602Srmssrc-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites3168318511168324915Rat
11365741LOC108350541uncharacterized LOC1083505413168324680168329056Rat
1564340Fndc11fibronectin type III domain containing 113168330607168333111Rat
1306056Helz2helicase with zinc finger 23168338813168353219Rat
41310751LOC120101833uncharacterized LOC1201018333168355464168362648Rat
620481Gmeb2glucocorticoid modulatory element binding protein 23168362650168400788Rat
3628Stmn3stathmin 33168416810168424946Rat
1306721Rtel1regulator of telomere elongation helicase 13168427247168465349Rat
621683Arfrp1ARF related protein 13168466351168473960Rat
1310801Zgpatzinc finger CCCH-type and G-patch domain containing3168473836168490380Rat
1562795Lime1Lck interacting transmembrane adaptor 13168490535168496627Rat
41152591Slc2a4rgSLC2A4 regulator3168493975168497616Rat
1307408Zbtb46zinc finger and BTB domain containing 463168497294168567799Rat
40958335Rnu6-663RNA, U6 small nuclear 6633168537148168537248Rat
41218205LOC120101834uncharacterized LOC1201018343168572115168573537Rat
1309726Abhd16babhydrolase domain containing 16B3168594677168596574Rat
735167Tpd52l2TPD52 like 23168598449168618201Rat
7748591LOC102548047uncharacterized LOC1025480473168599568168608538Rat
11502284Rpl34l2ribosomal protein L34-like23168601156168601935Rat
620516Dnajc5DnaJ heat shock protein family (Hsp40) member C53168621905168656570Rat
1565465Uckl1uridine-cytidine kinase 1-like 13168674849168687513Rat
1305284Zfp512bzinc finger protein 512B3168687520168698067Rat
1563203Samd10sterile alpha motif domain containing 103168700280168704427Rat
1307103Prpf6pre-mRNA processing factor 63168706952168771191Rat
1561282Linc00176long intergenic non-protein coding RNA 1763168771350168775133Rat
41104858Rnu6-181RNA, U6 small nuclear 1813168778195168778301Rat
1311718Sox18SRY-box transcription factor 183168785488168787290Rat
41216814LOC120101835uncharacterized LOC1201018353168787404168788468Rat
61825Tcea2transcription elongation factor A23168796244168804125Rat
629471Rgs19regulator of G-protein signaling 193168804532168813035Rat
1306208Lkaaear1LKAAEAR motif containing 13168813087168814746Rat
68438Oprl1opioid related nociceptin receptor 13168831934168839920Rat
1304899Myt1myelin transcription factor 13168890466168950341Rat
1305684Pcmtd2protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 23168960312168979504Rat
41037672LOC120101836uncharacterized LOC1201018363168966890168983453Rat
1587294Polr3kRNA polymerase III subunit K3168982846168987043Rat
1592177Ube2n-ps1ubiquitin-conjugating enzyme E2N, pseudogene 13169014874169015331Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10501D3Mco33393163577121163577474Ratregion
34178D3Mgh231393162184655162184794Ratregion
34240D3Mgh11503161695835161695983Ratregion
34682D9Mit101503161935792161935942Ratregion
11355D3Wox82793168266540168266819Ratregion
11356D3Arb153483168266545168266891Ratregion
11357D3Mgh271483168266545168266691Ratregion
36616D3Rat21743162581869162582043Ratregion
36745D3Rat11593168026691168026850Ratregion
36759D3Rat591373161299432161299569Ratregion
38244D3Rat1322083162923310162923518Ratregion
40300D3Rat1971553165511109165511264Ratregion
42134D3Arb242403161935834161936089Ratregion
41322D3Rat1371733161192952161193129Ratregion
42682D3Rat2423083167680072167680372Ratregion
42683D3Rat2412293163370746163370971Ratregion
43748D3Got1602773161455439161455716Ratregion
43751D3Got1631703163489684163489852Ratregion
43753D3Got1681353162683051162683183Ratregion
43754D3Got1652733163274770163275043Ratregion
43755D3Got1712213165443122165443343Ratregion
43756D3Got1671483164177361164177504Ratregion
43756D3Got1671483164177361164177504Ratregion
43756D3Got1671483164477104164477250Ratregion
43756D3Got1671483164477104164477250Ratregion
43757D3Got1662833163556062163556345Ratregion
43757D3Got1662833163556132163556345Ratregion
43758D3Wox12113166177348166177555Ratregion
43759D3Got1742093165222941165223150Ratregion
43760D3Got1703813165772500165772878Ratregion
43761D3Got1731283166711119166711247Ratregion
43763D3Got1721423167455813167455955Ratregion
60381D3Got1612833162232764162233047Ratregion
60384D3Got1692353163383846163384081Ratregion
62482D3Uia32753168511823168512098Ratregion
66481D3Mco242013163595843163596045Ratregion
66506D3Mco312893168266538168266827Ratregion
1631510D3Wox401453167192318167192463Ratregion
1581964D3Mco352023166863347166863549Ratregion
1581968D3Mco711823162104144162104241Ratregion
1581968D3Mco711823162104144162104326Ratregion
1581970D3Mco411643168197182168197346Ratregion
1581974D3Mco851353165559913165560048Ratregion
1581976D3Mco671513166173343166173494Ratregion
1581978D3Mco841743165169843165170019Ratregion
1581980D3Mco362133168974481168974694Ratregion
1581982D3Mco541803166576742166576920Ratregion
1581982D3Mco541803166576742166577451Ratregion
1581982D3Mco541803166576859166576920Ratregion
1581984D3Mco793183163577127163577445Ratregion
1581986D3Mco831953165250878165251073Ratregion
1581990D3Mco663165728676165728811Ratregion
1581992D3Mco522263166781685166781911Ratregion
1581994D3Mco403113163555942163556253Ratregion
1581998D3Mco591753166653001166653176Ratregion
1582000D3Mco442473167830297167830544Ratregion
1582006D3Mco581723166639728166639900Ratregion
1582010D3Mco652323165843099165843331Ratregion
1582012D3Mco611383165574796165574936Ratregion
1582014D3Mco491763166824576166824754Ratregion
1582026D3Mco511503166793175166793325Ratregion
1582032D3Mco762113162619258162619469Ratregion
1582034D3Mco481933166960324166960517Ratregion
1582040D3Mco391743167914451167914627Ratregion
1582042D3Mco782253161994411161994638Ratregion
1582046D3Mco452193167725610167725829Ratregion
1582048D3Mco802233163584479163584700Ratregion
1582050D3Mco561813166689940166690121Ratregion
1582054D3Mco642333166159472166159705Ratregion
1582060D3Mco471393166972752166972891Ratregion
1582064D3Mco622103165645862165646072Ratregion
1582066D3Mco431703168375086168375256Ratregion
1582068D3Mco821683165267902165268067Ratregion
1582076D3Mco342033166863220166863423Ratregion
1582078D3Mco572483166692672166692920Ratregion
1582080D3Mco742133165678962165679175Ratregion
1582088D3Mco531673166585339166585506Ratregion
1582090D3Mco461693167003822167003991Ratregion
1582096D3Mco721553162060765162060920Ratregion
1582098D3Mco631303165806737165806867Ratregion
1582100D3Mco421833168404698168404881Ratregion
1582102D3Mco751913165538050165538241Ratregion
1629518DXGot1422993165284261165284328Ratregion
1640717D3Got2381593163209293163209452Ratregion
2302875D3Hmgc141223167635060167635182Ratregion
2302877D3Hmgc191733168494575168494748Ratregion
2302879D3Hmgc111963167375372167375568Ratregion
2302883D3Hmgc92023167068732167068934Ratregion
2302887D3Hmgc132073167599713167599920Ratregion
2302899D3Hmgc211623168787741168787906Ratregion
2302919D3Hmgc82183166582847166583067Ratregion
2302921D3Hmgc171483167963429167963577Ratregion
2302923D3Hmgc22823165936723165937005Ratregion
2302925D3Hmgc52283166286778166287006Ratregion
2302931D3Hmgc32363165959442165959678Ratregion
2302933D3Hmgc221653168832336168832503Ratregion
2302935D3Hmgc202783168587556168587834Ratregion
2302937D3Hmgc42833166284884166285167Ratregion
2302941D3Hmgc103167227635167227846Ratregion
2302947D3Hmgc182903168469073168469357Ratregion
2302951D3Hmgc71483166671506166671654Ratregion
2302953D3Hmgc152183167797741167797959Ratregion
2302955D3Hmgc62783166307064166307342Ratregion
2302961D3Hmgc162363167830309167830545Ratregion
2302965D3Hmgc231873168850308168850495Ratregion
5036205D2Bwg0647e3463167178043167178389Ratregion
5038938RH1274191833168411941168412124Ratregion
5038944RH1274221863168986546168986732Ratregion
7206526UniSTS:54687811143168923779168924893Ratregion
7206582BC00677911633168346199168347362Ratregion
5036275Edn33003163563245163563545Ratregion
5039200RH1275692033161814098161814301Ratregion
5036444Oprl2323168838089168838321Ratregion
5031224PMC102812P15313168364857168365388Ratregion
7205924PMC22380P23483163086945163087293Ratregion
7206104Timp21203163247412163248931Ratregion
5026106RH1309341863161322773161322959Ratregion
5034299G651975733165464853165465426Ratregion
5029207RH1439231223165505177165505299Ratregion
5034512BI2803651923163259116163260557Ratregion
5029291RH1442411433168129524168129667Ratregion
5026814RH1336361853161202302161202487Ratregion
5026908RH1339982093167255731167255940Ratregion
5029399RH1446431503167298059167298209Ratregion
5029435Rgs1903168805439168805586Ratregion
5032251AI6621771003162505970162506070Ratregion
5026938RH1341102013165502641165502842Ratregion
5027002RH1343491923168300618168300891Ratregion
5027135RH117171613163135975163136136Ratregion
5027239AW3196441463162500737162500883Ratregion
5027241AB0004941323168194813168194945Ratregion
5032761RH1352022183167480860167481079Ratregion
5030153BF4010712023166980811166981013Ratregion
5027667Bmp72543161716033161716287Ratregion
5033141RH1377491573168074155168074312Ratregion
5025190RH1273612083168617919168618127Ratregion
502783707.MMHAP64FLC1.seq1693168530840168531009Ratregion
5030757BF4045582013161241405161241606Ratregion
5033549RH1392331833165501365165501548Ratregion
5033743RH1399571833167164983167165166Ratregion
5028412C855142043162906262162906466Ratregion
5028420AU0435352113167269626167270028Ratregion
5055975RH1441111433164858619164858762Ratregion
5056999UniSTS:2391494783168804855168805333Ratregion
5052055RH948141563161926118161926274Ratregion
5054263RH1431241933167743544167743737Ratregion
5055359RH1437561033161323832161323935Ratregion
5054591RH1433121163168497939168498055Ratregion
5055629RH1439111243165501694165501818Ratregion
5055851RH1440392333165336489165336722Ratregion
5052261L264791613168265894168266055Ratregion
5058894BI2781841633168655598168655761Ratregion
5055673RH1439361433165514637165514780Ratregion
5052353X753161613161814138161814299Ratregion
5050724RH1342211813168658628168658809Ratregion
5054089RH1430241183167980038167980156Ratregion
5050506RH1340951873161814098161814285Ratregion
5050626RH1341651883168051897168052549Ratregion
5053277RH1425552553168596177168596432Ratregion
5041664RH1289871933167832495167832688Ratregion
5044048RH1303801803162505856162506036Ratregion
5040708RH1284381983167270438167270636Ratregion
5044636RH1307171873161641293161641480Ratregion
5044676RH1307402013163224497163224698Ratregion
5045710RH1313342163168656254168656470Ratregion
5041862RH1291021953162906291162906486Ratregion
5048690RH1330491993167411982167412181Ratregion
5044922RH1308811833162578463162578646Ratregion
5047466RH1323442173162882075162882292Ratregion
5048964RH1332082103167418723167418933Ratregion
5049306RH1334052203167772596167772816Ratregion
5047102RH1321342123163126950163127162Ratregion
5047174RH1321762183168804592168804810Ratregion
5047198RH1321901853168860459168860644Ratregion
5047282RH1322381883168466608168466796Ratregion
5040124RH1281032113168655550168655761Ratregion
5040524RH1283321523168490188168490340Ratregion
5040602RH1283771913168416930168417121Ratregion
5071928RH1353661903162383985162384175Ratregion
5072048RH1354352173161993532161993749Ratregion
5073946RH1377301793168092137168092316Ratregion
5074092RH1378161613168059397168059558Ratregion
5074504RH1380552103167836192167836402Ratregion
5076976RH1394872033168674979168675259Ratregion
5077054RH1395321963168492855168493051Ratregion
5075560RH1386641483168099751168099899Ratregion
5077118RH1395711943168839660168839854Ratregion
5076466RH1391911623163075746163075908Ratregion
5077526RH1398062173168979257168979475Ratregion
5079742RH1411771503167578111167578261Ratregion
5079854RH1412411803164980526164980620Ratregion
5079932RH1412862103163263089163263299Ratregion
5078388RH1403131943163801903163802096Ratregion
5078540RH1404031333168839556168839689Ratregion
5070762RH1346892133161640112161640325Ratregion
5073706RH1375912103162496957162497167Ratregion
5072302RH1367701283168492923168493051Ratregion
5061764AW5332751513168620079168620230Ratregion
5067530AU0476891793166300437166300616Ratregion
5070025RH944241603163136060163136220Ratregion
5070031RH944281513168142103168142253Ratregion
5070243RH94555903168136281168136371Ratregion
5070338AW120700793167003259167003338Ratregion
5070340AI8398841123168363293168363405Ratregion
5069102AU0467232723165250807165251079Ratregion
5070438AI3857491143168785620168785734Ratregion
5069268AU0466082483164082726164082802Ratregion
5065526BF4123711303166366132166366262Ratregion
5061020BF3897242333163090308163090541Ratregion
5060284AW5311031743161323762161323936Ratregion
5060338AW5314981893165539245165539434Ratregion
5065134AI0447951843167708162167708346Ratregion
5065154BE1210181773168302233168302410Ratregion
5065208BE1211881503163465357163465507Ratregion
5062234BE1129542053167348194167348399Ratregion
5060906BF3959491823163083790163083972Ratregion
5062518BE1067851503167795420167795570Ratregion
5062540BF4033921523168402495168402647Ratregion
5062772AW5343951693168094465168094634Ratregion
5062838BI2951321583161839720161839878Ratregion
5061198BE0992141743162901084162901258Ratregion
5066270PMC133770P12873161319439161319726Ratregion
5066326PMC152262P31743161934097161934271Ratregion
5064880BE1086731853168607986168608171Ratregion
5086887BM3868161543168654385168654539Ratregion
5087042AA8187981803163225050163225230Ratregion
5087281AW5322511543161763931161764085Ratregion
5087981UniSTS:1436841853168194984168195169Ratregion
5083489BE1002401683166854066166854234Ratregion
5090655AU0498822273165843111165843338Ratregion
5083797AI2306572113163122699163122911Ratregion
5084016AI2324131933167346584167347027Ratregion
5084122AA9436661223167191632167191754Ratregion
5087640PMC86435P15503161930677161931227Ratregion
5087795D2Ucl291403168151608168151824Ratregion
5085423AI0699862013161236437161236638Ratregion
5081022RH1419192153167347605167347820Ratregion
5088641AU0486902313165703537165703768Ratregion
5090255AU0496431223168782091168782213Ratregion
5082689BG3735961303161446515161446645Ratregion
5081066RH1419451503162322269162322419Ratregion
5081122RH1419772103167835131167835341Ratregion
5083849AI2320571213162667860162667981Ratregion
5083946AI2322791183161770760161770878Ratregion
5503796UniSTS:4711034123168786412168787008Ratregion
5504119UniSTS:2584721063168919017168919123Ratregion
5504558PMC304100P82003168948746168948946Ratregion
5505231Pck1743161933962161934036Ratregion
5505955UniSTS:4966763863163135341163136087Ratregion
5505881UniSTS:4959924233168232144168232567Ratregion
5506140UniSTS:498461703162246377162246414Ratregion
5506224Oprl12463168837767168838013Ratregion
5499777UniSTS:2346201103162499964162500074Ratregion
5499779UniSTS:2346242033167018643167018846Ratregion
5502807TCFL56523167752002167752654Ratregion
5500755D22S11755843161961171161961755Ratregion
5500679RH1366205793167137341167137920Ratregion
5500849RH106561773168950085168950262Ratregion
5501075PMC133887P23403161929820161930160Ratregion
5501486D7S15197923162719112162719904Ratregion
5501606RH3940010513162607121162608172Ratregion
5502058MARC_26200-26201:1030734098:19553168678922168679877Ratregion
Position Markers

Flank 1: (D3Rat137)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23161,192,952 - 161,193,129 (+)MAPPER
Rnor_6.03170,428,815 - 170,428,991NCBI
Rnor_5.03176,504,241 - 176,504,417UniSTS
RGSC_v3.43163,335,008 - 163,335,184UniSTS
RGSC_v3.43163,335,007 - 163,335,184RGD
RGSC_v3.13163,241,044 - 163,241,220RGD
Celera3160,393,117 - 160,393,293UniSTS
RH 3.4 Map31494.1UniSTS
RH 3.4 Map31494.1RGD
RH 2.0 Map31013.2RGD
SHRSP x BN Map384.6299RGD
Cytogenetic Map3q42UniSTS
Peak: (D3Rat1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23168,026,691 - 168,026,850 (+)MAPPER
Rnor_6.03176,417,943 - 176,418,101NCBI
Rnor_5.03180,127,863 - 180,128,021UniSTS
RGSC_v3.43170,016,252 - 170,016,653RGD
RGSC_v3.43170,016,309 - 170,016,467UniSTS
RGSC_v3.13169,922,345 - 169,922,503RGD
Celera3164,558,222 - 164,558,366UniSTS
RH 3.4 Map31533.2RGD
RH 3.4 Map31533.2UniSTS
RH 2.0 Map31027.1RGD
SHRSP x BN Map391.5299RGD
FHH x ACI Map3104.89RGD
Cytogenetic Map3q43UniSTS
Flank 2: (D3Rat77)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.13167,071,988 - 167,072,217RGD
RH 3.4 Map31496.8UniSTS
RH 3.4 Map31496.8RGD
RH 2.0 Map31015.6RGD
SHRSP x BN Map391.5299RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3145925360166177555Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145925360166177555Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3145925360166177555Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3145925360166177555Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3145925360166177555Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3141074471169034231Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3145925360166177555Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
1300161Rf10Renal function QTL 103.57renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)3161192952169034231Rat
8552791Vie2Viral induced encephalitis QTL 24.1brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)3145956084169034231Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
2317883Alcrsp26Alcohol response QTL 261.80.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)3145526770169034231Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141339013162184794Rat
1598854Memor10Memory QTL 102exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)3145956084161299569Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3130193298161695983Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3149040888168026850Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3145925360166177555Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Rf10

RGD Curation Notes
Note Type Note Reference
qtl_general change in renal vascular resistance calculated after acetylcholine administration 727992
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992