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Gene: Tubb1 (tubulin, beta 1 class VI) Rattus norvegicus
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Symbol: Tubb1
Name: tubulin, beta 1 class VI
Description: Predicted to have GTP binding activity. Predicted to be involved in mitotic cell cycle and spindle assembly. Predicted to localize to the cytoplasm and microtubule. Human ortholog(s) of this gene implicated in autosomal dominant macrothrombocytopenia TUBB1-related. Orthologous to human TUBB1 (tubulin beta 1 class VI); PARTICIPATES IN docetaxel pharmacodynamics pathway; tyrosinemia type III pathway; vinblastine pharmacodynamics pathway; INTERACTS WITH ammonium chloride; bisphenol A; rotenone.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC679312; similar to beta tubulin 1, class VI; tubulin beta-1 chain
Orthologs:
Homo sapiens (human) : TUBB1 (tubulin beta 1 class VI)  HGNC  Alliance
Mus musculus (house mouse) : Tubb1 (tubulin, beta 1 class VI)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tubb1 (tubulin beta 1 class VI)
Pan paniscus (bonobo/pygmy chimpanzee) : TUBB1 (tubulin beta 1 class VI)
Canis lupus familiaris (dog) : TUBB1 (tubulin beta 1 class VI)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tubb1 (tubulin beta 1 class VI)
Sus scrofa (pig) : TUBB1 (tubulin beta 1 class VI)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03172,550,252 - 172,558,089 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3172,550,258 - 172,558,114 (+)Ensembl
Rnor_5.03178,597,398 - 178,607,497 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3162,421,439 - 162,429,284 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tubb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589557
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.