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Gene: Ythdf1 (YTH N(6)-methyladenosine RNA binding protein 1) Rattus norvegicus
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Symbol: Ythdf1
Name: YTH N(6)-methyladenosine RNA binding protein 1
Description: Predicted to have N6-methyladenosine-containing RNA binding activity; mRNA binding activity; and ribosome binding activity. Predicted to be involved in several processes, including learning or memory; regulation of long-term synaptic potentiation; and regulation of translation. Predicted to localize to cytoplasm. Orthologous to human YTHDF1 (YTH N6-methyladenosine RNA binding protein 1); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296467; YTH domain family 1; YTH domain family protein 1; YTH domain family, member 1; YTH domain-containing family protein 1
Orthologs:
Homo sapiens (human) : YTHDF1 (YTH N6-methyladenosine RNA binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ythdf1 (YTH N6-methyladenosine RNA binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ythdf1 (YTH N6-methyladenosine RNA binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : YTHDF1 (YTH N6-methyladenosine RNA binding protein 1)
Canis lupus familiaris (dog) : YTHDF1 (YTH N6-methyladenosine RNA binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ythdf1 (YTH N6-methyladenosine RNA binding protein 1)
Sus scrofa (pig) : YTHDF1 (YTH N6-methyladenosine RNA binding protein 1)
Chlorocebus sabaeus (African green monkey) : YTHDF1 (YTH N6-methyladenosine RNA binding protein 1)
Heterocephalus glaber (naked mole-rat) : Ythdf1 (YTH N6-methyladenosine RNA binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03176,415,911 - 176,431,423 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3176,415,914 - 176,431,423 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03180,125,831 - 180,141,407 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43170,014,277 - 170,029,789 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13169,920,315 - 169,935,825 (-)NCBI
Celera3164,544,900 - 164,560,398 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ythdf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308932
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.