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Cellular Component
Molecular Function
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Analyze GeneStrainQTL List |
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![]() Biological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | heart development | | IEP | | 2316160 | | RGD | | protein phosphorylation | | IBA | CGD:CAL0000191263 more ... | 13792537 | PMID:21873635 | GO_Central | | protein phosphorylation | | IBA | FB:FBgn0004106 more ... | 13792537 | PMID:21873635 | GO_Central | | regulation of cell cycle | | IEA | GO:0004693 | 1600115 | GO_REF:0000108 | GOC | GO_REF:0000108 | regulation of cilium assembly | | ISS | UniProtKB:Q9U2H1 | 1600115 | GO_REF:0000024 | UniProt | GO_REF:0000024 | |
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1. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | GOA data from the GO Consortium |
3. | Kim SO, etal., J Cell Biochem. 1998 Jun 15;69(4):506-21. |
4. | MGD data from the GO Consortium |
5. | RGD automated data pipeline |
6. | RGD automated import pipeline for gene-chemical interactions |
7. | RGD comprehensive gene curation |
Cdkl1 (Rattus norvegicus - Norway rat) |
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CDKL1 (Homo sapiens - human) |
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Cdkl1 (Mus musculus - house mouse) |
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Cdkl1 (Chinchilla lanigera - long-tailed chinchilla) |
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CDKL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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CDKL1 (Canis lupus familiaris - dog) |
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Cdkl1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CDKL1 (Sus scrofa - pig) |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
testis | heart | brain | ovary | uterus | skeletal muscle tissue | colon | gastrocnemius | forebrain | hindbrain | lung | spleen | liver | kidney | adrenal gland | thymus | |
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High | ||||||||||||||||
Medium | 1 | 11 | 8 | 4 | 2 | 16 | 21 | 8 | 29 | |||||||
Low | 21 | 37 | 12 | 7 | 2 | 1 | 8 | 10 | 4 | 11 | 3 | 37 | 6 | 8 | 8 | |
Below cutoff | 6 | 1 | 4 |
RefSeq Transcripts | NM_001025121 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006240171 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006240172 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006240173 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AABR07064731 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AAHX01044909 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AAHX01044910 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AAHX01044911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AAHX01044912 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AAHX01044913 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC081896 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473947 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | NM_001025121 ⟹ NP_001020292 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
GCATTTAGTTGATGAGGCTCGAGAGCGATCGGTTCTCGTATTTCATAAGCGACCTTTAAAAACThide sequence |
RefSeq Acc Id: | XM_006240171 ⟹ XP_006240233 | ||||||||||||||
RefSeq Status: | |||||||||||||||
Type: | CODING | ||||||||||||||
Position: |
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Sequence: |
AACTTCTAAAACTCTTAGAATCCTGAAGCAAGAACACATCTATAGGGCAGGTACGAGTCAAATThide sequence |
RefSeq Acc Id: | XM_006240172 ⟹ XP_006240234 | ||||||||||||||
RefSeq Status: | |||||||||||||||
Type: | CODING | ||||||||||||||
Position: |
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Sequence: |
GCTGGAGCACTCTGCCAGGACAGCCTGGGTGCAGGCGCTATCCCGCAGACGCTCCACGCTGTGAhide sequence |
RefSeq Acc Id: | XM_006240173 ⟹ XP_006240235 | ||||||||||||||
RefSeq Status: | |||||||||||||||
Type: | CODING | ||||||||||||||
Position: |
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Sequence: |
AGCTCGGATAGAATTCCCAAAGGGGTCGGGGGCAGCACATTCTTGTTTCTGAGTCCATCTGCCChide sequence |
Protein RefSeqs | NP_001020292 | (Get FASTA) | NCBI Sequence Viewer |
XP_006240233 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006240234 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006240235 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH81896 | (Get FASTA) | NCBI Sequence Viewer |
EDM03530 | (Get FASTA) | NCBI Sequence Viewer | |
Q66HE7 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001020292 ⟸ NM_001025121 |
- UniProtKB: | Q66HE7 (UniProtKB/Swiss-Prot) |
- Sequence: |
MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVhide sequence |
RefSeq Acc Id: | XP_006240233 ⟸ XM_006240171 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q66HE7 (UniProtKB/Swiss-Prot) |
- Sequence: |
MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVhide sequence |
RefSeq Acc Id: | XP_006240234 ⟸ XM_006240172 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q66HE7 (UniProtKB/Swiss-Prot) |
- Sequence: |
MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVhide sequence |
RefSeq Acc Id: | XP_006240235 ⟸ XM_006240173 |
- Peptide Label: | isoform X2 |
- Sequence: |
MSELEDLLASAQASRPLFPSLSQQAQGLSCLPSRPPSSEPSFCSNLLFLPQAAASKPLIPSPSRhide sequence |
RGD ID: | 13694640 | |||||||||
Promoter ID: | EPDNEW_R5163 | |||||||||
Type: | single initiation site | |||||||||
Name: | Cdkl1_1 | |||||||||
Description: | cyclin dependent kinase like 1 | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1305080 | AgrOrtholog |
Ensembl Genes | ENSRNOG00000038720 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSRNOP00000006374 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Transcript | ENSRNOT00000006374 | ENTREZGENE, UniProtKB/Swiss-Prot |
IMAGE_CLONE | IMAGE:7110321 | IMAGE-MGC_LOAD |
InterPro | Kinase-like_dom_sf | UniProtKB/Swiss-Prot |
Prot_kinase_dom | UniProtKB/Swiss-Prot | |
Protein_kinase_ATP_BS | UniProtKB/Swiss-Prot | |
Ser/Thr_kinase_AS | UniProtKB/Swiss-Prot | |
KEGG Report | rno:314198 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:93810 | IMAGE-MGC_LOAD |
NCBI Gene | 314198 | ENTREZGENE |
Pfam | Pkinase | UniProtKB/Swiss-Prot |
PharmGKB | CDKL1 | RGD |
PhenoGen | Cdkl1 | PhenoGen |
PROSITE | PROTEIN_KINASE_ATP | UniProtKB/Swiss-Prot |
PROTEIN_KINASE_DOM | UniProtKB/Swiss-Prot | |
PROTEIN_KINASE_ST | UniProtKB/Swiss-Prot | |
SMART | S_TKc | UniProtKB/Swiss-Prot |
Superfamily-SCOP | SSF56112 | UniProtKB/Swiss-Prot |
UniGene | Rn.182073 | ENTREZGENE |
UniProt | CDKL1_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-01-13 | Cdkl1 | cyclin dependent kinase like 1 | Cdkl1 | cyclin-dependent kinase-like 1 (CDC2-related kinase) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | Cdkl1 | cyclin-dependent kinase-like 1 (CDC2-related kinase) | Cdkl1_predicted | cyclin-dependent kinase-like 1 (CDC2-related kinase) (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-12 | Cdkl1_predicted | cyclin-dependent kinase-like 1 (CDC2-related kinase) (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |
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More on Cdkl1 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: rn5 rn6 |
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NCBI Genome Data Viewer |
RGD Object Information | |
RGD ID: | 1305080 |
Created: | 2005-01-12 |
Species: | Rattus norvegicus |
Last Modified: | 2019-11-27 |
Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.