Tmem65 (transmembrane protein 65) - Rat Genome Database

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Gene: Tmem65 (transmembrane protein 65) Rattus norvegicus
Analyze
Symbol: Tmem65
Name: transmembrane protein 65
RGD ID: 1563224
Description: Predicted to be involved in cardiac conduction; cardiac ventricle development; and regulation of cardiac conduction. Predicted to be located in several cellular components, including intercalated disc; mitochondrial inner membrane; and nucleolus. Predicted to be active in mitochondrion. Orthologous to human TMEM65 (transmembrane protein 65); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 3,3',5,5'-tetrabromobisphenol A; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC500874; LOC500874; RGD1563224; similar to 4930438D12Rik protein; uncharacterized protein LOC500874
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8792,163,632 - 92,268,430 (-)NCBIGRCr8
mRatBN7.2790,336,997 - 90,378,930 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl790,274,142 - 90,379,474 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx792,226,577 - 92,267,565 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0794,427,858 - 94,468,726 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0794,252,518 - 94,293,603 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0798,668,589 - 98,709,613 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl798,605,722 - 98,709,649 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0799,270,336 - 99,310,327 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4795,545,429 - 95,587,199 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera787,102,931 - 87,143,627 (-)NCBICelera
Cytogenetic Map7q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tmem65Rattrichorhinophalangeal syndrome type I  ISORGD:16033568554872ClinVar Annotator: match by term: Trichorhinophalangeal dysplasia type IClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tmem65RatExperimental Liver Cirrhosis  ISORGD:160335611554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136

1 to 20 of 63 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tmem65Rat(1->4)-beta-D-glucan multiple interactionsISORGD:16182916480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of TMEM65 mRNACTDPMID:36331819
Tmem65Rat1,2-dimethylhydrazine decreases expressionISORGD:161829164804641,2-Dimethylhydrazine results in decreased expression of TMEM65 mRNACTDPMID:22206623
Tmem65Rat2,3',4,4',5-Pentachlorobiphenyl affects expressionISORGD:161829164804642,3',4,4',5-pentachlorobiphenyl affects the expression of TMEM65 mRNACTDPMID:31388691
Tmem65Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:16182916480464Tetrachlorodibenzodioxin results in increased expression of TMEM65 mRNACTDPMID:19465110
Tmem65Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:16182916480464Tetrachlorodibenzodioxin affects the expression of TMEM65 mRNACTDPMID:21570461
Tmem65Rat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642,3,7,8-tetrachlorodibenzofuran results in decreased expression of TMEM65 mRNACTDPMID:32109520
Tmem65Rat3,3',5,5'-tetrabromobisphenol A increases expressionEXP 6480464tetrabromobisphenol A results in increased expression of TMEM65 mRNACTDPMID:27914987
Tmem65Rat4,4'-diaminodiphenylmethane increases expressionEXP 64804644,4'-diaminodiphenylmethane results in increased expression of TMEM65 mRNACTDPMID:25380136
Tmem65Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of TMEM65 mRNACTDPMID:24780913
Tmem65Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of TMEM65 mRNACTDPMID:30047161
Tmem65Ratacetamide increases expressionEXP 6480464acetamide results in increased expression of TMEM65 mRNACTDPMID:31881176
Tmem65Rataconitine decreases expressionEXP 6480464Aconitine results in decreased expression of TMEM65 proteinCTDPMID:33236894
Tmem65Ratacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of TMEM65 mRNACTDPMID:28959563
Tmem65Ratamitrole increases expressionEXP 6480464Amitrole results in increased expression of TMEM65 mRNACTDPMID:30047161
Tmem65Ratantirheumatic drug increases expressionISORGD:16033566480464Antirheumatic Agents results in increased expression of TMEM65 mRNACTDPMID:24449571
Tmem65Rataristolochic acid A decreases expressionISORGD:16033566480464aristolochic acid I results in decreased expression of TMEM65 mRNACTDPMID:33212167
Tmem65Ratarsenite(3-) multiple interactionsISORGD:16033566480464arsenite inhibits the reaction [G3BP1 protein binds to TMEM65 mRNA]CTDPMID:32406909
Tmem65Ratazoxystrobin decreases expressionISORGD:16033566480464azoxystrobin results in decreased expression of TMEM65 mRNACTDPMID:33512557
Tmem65Ratbenzo[a]pyrene increases expressionISORGD:16182916480464Benzo(a)pyrene results in increased expression of TMEM65 mRNACTDPMID:22228805
Tmem65Ratbenzo[a]pyrene diol epoxide I decreases expressionISORGD:160335664804647,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of TMEM65 mRNACTDPMID:19150397

1 to 20 of 63 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tmem65Ratcardiac conduction involved_inISORGD:16182911624291 PMID:36257954RGDPMID:36257954
Tmem65Ratcardiac conduction involved_inIEAUniProtKB:Q4VAE3|ensembl:ENSMUSP000000719841600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratcardiac ventricle development involved_inISORGD:16182911624291 PMID:26403541RGDPMID:26403541
Tmem65Ratcardiac ventricle development involved_inIEAUniProtKB:Q4VAE3|ensembl:ENSMUSP000000719841600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratcardiac ventricle development involved_inIBAMGI:1922118|PANTHER:PTN002729608|ZFIN:ZDB-GENE-081022-991600115GO_REF:0000033GO_CentralGO_REF:0000033
Tmem65Ratregulation of cardiac conduction involved_inISORGD:16182911624291 PMID:26403541RGDPMID:26403541
Tmem65Ratregulation of cardiac conduction involved_inIEAUniProtKB:Q4VAE3|ensembl:ENSMUSP000000719841600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratregulation of cardiac conduction involved_inIBAMGI:1922118|PANTHER:PTN002729608|ZFIN:ZDB-GENE-081022-991600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component
1 to 16 of 16 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tmem65Ratintercalated disc located_inISORGD:16182911624291 PMID:26403541RGDPMID:26403541
Tmem65Ratintercalated disc located_inIEAUniProtKB:Q6PI78|ensembl:ENSP000002976321600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratintercalated disc located_inIEAUniProtKB:Q4VAE3|ensembl:ENSMUSP000000719841600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratintercalated disc located_inISORGD:16033561624291 PMID:26403541RGDPMID:26403541
Tmem65Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Tmem65Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Tmem65Ratmitochondrial inner membrane located_inISORGD:16033561624291 PMID:24765583, PMID:28295037RGDPMID:24765583|PMID:28295037
Tmem65Ratmitochondrial inner membrane located_inIEAUniProtKB:Q6PI78|ensembl:ENSP000002976321600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratmitochondrion located_inISORGD:16033569068941 PMID:34800366FlyBasePMID:34800366
Tmem65Ratmitochondrion is_active_inIBAPANTHER:PTN000496202|UniProtKB:Q6PI781600115GO_REF:0000033GO_CentralGO_REF:0000033
Tmem65Ratnucleolus located_inIEAUniProtKB:Q6PI78|ensembl:ENSP000002976321600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratnucleolus located_inISORGD:16033561624291 RGDGO_REF:0000052
Tmem65Ratplasma membrane located_inIEAUniProtKB:Q4VAE3|ensembl:ENSMUSP000000719841600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratplasma membrane located_inIEAUniProtKB:Q6PI78|ensembl:ENSP000002976321600115GO_REF:0000107EnsemblGO_REF:0000107
Tmem65Ratplasma membrane located_inISORGD:16182911624291 PMID:26403541RGDPMID:26403541
Tmem65Ratplasma membrane located_inISORGD:16033561624291 PMID:26403541RGDGO_REF:0000052|PMID:26403541
1 to 16 of 16 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Tmem65Ratprotein binding enablesISORGD:16033561624291UniProtKB:O14684|UniProtKB:O15529|UniProtKB:O95870|UniProtKB:P15151|UniProtKB:P26951|UniProtKB:P48165|UniProtKB:P49447|UniProtKB:P54219-3|UniProtKB:Q13113|UniProtKB:Q13520|UniProtKB:Q15125|UniProtKB:Q15800|UniProtKB:Q3KNW5|UniProtKB:Q3SXY8|UniProtKB:Q53TN4|UniProtKB:Q5JX71|UniProtKB:Q5T4F4|UniProtKB:Q86VR2|UniProtKB:Q8N5M9|UniProtKB:Q8NBQ5|UniProtKB:Q8TBP5|UniProtKB:Q96HE8|UniProtKB:Q96IK0|UniProtKB:Q9H6H4|UniProtKB:Q9HDC5|UniProtKB:Q9NPL8|UniProtKB:Q9NQQ7-3|UniProtKB:Q9NY72|UniProtKB:Q9P2J2-2|UniProtKB:Q9UHI5|UniProtKB:Q9Y282|UniProtKB:Q9Y320 PMID:32296183RGDPMID:32296183
Tmem65Ratprotein binding enablesISORGD:16182911624291UniProtKB:E9Q557|UniProtKB:P23242|UniProtKB:P97952 PMID:26403541, PMID:36257954RGDPMID:26403541|PMID:36257954


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932   PMID:18614015   PMID:24765583   PMID:26403541   PMID:28295037   PMID:34800366  



Tmem65
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8792,163,632 - 92,268,430 (-)NCBIGRCr8
mRatBN7.2790,336,997 - 90,378,930 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl790,274,142 - 90,379,474 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx792,226,577 - 92,267,565 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0794,427,858 - 94,468,726 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0794,252,518 - 94,293,603 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0798,668,589 - 98,709,613 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl798,605,722 - 98,709,649 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0799,270,336 - 99,310,327 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4795,545,429 - 95,587,199 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera787,102,931 - 87,143,627 (-)NCBICelera
Cytogenetic Map7q33NCBI
TMEM65
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388124,306,189 - 124,372,701 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8124,306,189 - 124,372,701 (-)EnsemblGRCh38hg38GRCh38
GRCh378125,318,430 - 125,384,942 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368125,392,340 - 125,454,121 (-)NCBINCBI36Build 36hg18NCBI36
Celera8121,511,293 - 121,573,166 (-)NCBICelera
Cytogenetic Map8q24.13NCBI
HuRef8120,650,408 - 120,670,285 (-)NCBIHuRef
CHM1_18125,363,524 - 125,425,289 (-)NCBICHM1_1
T2T-CHM13v2.08125,438,941 - 125,505,444 (-)NCBIT2T-CHM13v2.0
Tmem65
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391558,654,118 - 58,695,510 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1558,654,118 - 58,695,487 (-)EnsemblGRCm39 Ensembl
GRCm381558,782,269 - 58,823,663 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1558,782,269 - 58,823,638 (-)EnsemblGRCm38mm10GRCm38
MGSCv371558,613,824 - 58,654,982 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361558,612,352 - 58,653,510 (-)NCBIMGSCv36mm8
Celera1560,311,677 - 60,352,685 (-)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1525.09NCBI
Tmem65
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555403,007,879 - 3,064,919 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555403,006,776 - 3,064,938 (-)NCBIChiLan1.0ChiLan1.0
TMEM65
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27141,730,177 - 141,796,664 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18117,241,536 - 117,307,806 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08120,993,261 - 121,059,743 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18123,747,053 - 123,791,955 (-)NCBIpanpan1.1PanPan1.1panPan2
TMEM65
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11322,426,487 - 22,494,520 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1322,426,793 - 22,494,520 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1322,392,169 - 22,459,957 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01322,749,249 - 22,836,557 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11322,475,985 - 22,556,509 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01322,579,557 - 22,666,788 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01322,822,017 - 22,909,339 (-)NCBIUU_Cfam_GSD_1.0
Tmem65
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530315,821,641 - 15,855,329 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647023,261,738 - 23,277,560 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647023,247,722 - 23,284,894 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM65
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl415,263,745 - 15,352,225 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1415,263,400 - 15,317,350 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2415,896,004 - 15,938,113 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM65
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18118,883,409 - 118,944,834 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603921,241,671 - 21,303,962 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem65
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473530,805,189 - 30,866,490 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473530,805,189 - 30,868,059 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Tmem65
297 total Variants

Predicted Target Of
Summary Value
Count of predictions:226
Count of miRNA genes:146
Interacting mature miRNAs:183
Transcripts:ENSRNOT00000064122
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 43 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat

1 to 10 of 43 rows
RH137464  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2790,337,872 - 90,338,072 (+)MAPPERmRatBN7.2
Rnor_6.0798,668,833 - 98,669,032NCBIRnor6.0
Rnor_5.0799,270,580 - 99,270,779UniSTSRnor5.0
RGSC_v3.4795,545,673 - 95,545,872UniSTSRGSC3.4
Celera787,103,175 - 87,103,374UniSTS
Cytogenetic Map7q33UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000064122   ⟹   ENSRNOP00000063472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl798,670,455 - 98,709,344 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077440   ⟹   ENSRNOP00000074649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl790,274,142 - 90,378,733 (-)Ensembl
Rnor_6.0 Ensembl798,605,722 - 98,709,649 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107015   ⟹   ENSRNOP00000093575
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl790,337,433 - 90,379,474 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113387   ⟹   ENSRNOP00000097891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl790,337,433 - 90,379,474 (-)Ensembl
RefSeq Acc Id: NM_001100995   ⟹   NP_001094465
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,227,113 - 92,268,178 (-)NCBI
mRatBN7.2790,337,629 - 90,378,697 (-)NCBI
Rnor_6.0798,668,589 - 98,709,613 (-)NCBI
Rnor_5.0799,270,336 - 99,310,327 (-)NCBI
RGSC_v3.4795,545,429 - 95,587,199 (-)RGD
Celera787,102,931 - 87,143,627 (-)RGD
Sequence:
RefSeq Acc Id: XM_039079755   ⟹   XP_038935683
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,226,483 - 92,268,430 (-)NCBI
mRatBN7.2790,336,997 - 90,378,910 (-)NCBI
RefSeq Acc Id: XM_063264121   ⟹   XP_063120191
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,163,632 - 92,268,408 (-)NCBI
RefSeq Acc Id: XM_063264122   ⟹   XP_063120192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,226,483 - 92,241,324 (-)NCBI
RefSeq Acc Id: XM_063264123   ⟹   XP_063120193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,163,632 - 92,268,401 (-)NCBI
RefSeq Acc Id: XR_005486706
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,234,349 - 92,268,409 (-)NCBI
mRatBN7.2790,344,875 - 90,378,930 (-)NCBI
RefSeq Acc Id: XR_005486707
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8792,234,349 - 92,268,402 (-)NCBI
mRatBN7.2790,344,877 - 90,378,928 (-)NCBI
RefSeq Acc Id: NP_001094465   ⟸   NM_001100995
- UniProtKB: A1L1L9 (UniProtKB/TrEMBL),   A6HRK7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074649   ⟸   ENSRNOT00000077440
Ensembl Acc Id: ENSRNOP00000063472   ⟸   ENSRNOT00000064122
RefSeq Acc Id: XP_038935683   ⟸   XM_039079755
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AVM0 (UniProtKB/TrEMBL),   A6HRK7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000097891   ⟸   ENSRNOT00000113387

Name Modeler Protein Id AA Range Protein Structure
AF-F1LQZ0-F1-model_v2 AlphaFold F1LQZ0 1-259 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13695357
Promoter ID:EPDNEW_R5875
Type:initiation region
Name:Tmem65_1
Description:transmembrane protein 65
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0798,709,661 - 98,709,721EPDNEW


1 to 21 of 21 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-33308 BioCyc
Ensembl Genes ENSRNOG00000008934 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077440.2 UniProtKB/TrEMBL
  ENSRNOT00000107015 ENTREZGENE
  ENSRNOT00000107015.1 UniProtKB/TrEMBL
  ENSRNOT00000113387 ENTREZGENE
  ENSRNOT00000113387.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7190631 IMAGE-MGC_LOAD
InterPro Transmembrane_protein_65 UniProtKB/TrEMBL
KEGG Report rno:500874 UniProtKB/TrEMBL
MGC_CLONE MGC:156815 IMAGE-MGC_LOAD
NCBI Gene 500874 ENTREZGENE
PANTHER PTHR21706 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 65 UniProtKB/TrEMBL
Pfam DUF2453 UniProtKB/TrEMBL
PhenoGen Tmem65 PhenoGen
RatGTEx ENSRNOG00000008934 RatGTEx
UniProt A0A8I6AVM0 ENTREZGENE, UniProtKB/TrEMBL
  A1L1L9 ENTREZGENE, UniProtKB/TrEMBL
  A6HRK7 ENTREZGENE, UniProtKB/TrEMBL
  B1WBL4 ENTREZGENE, UniProtKB/TrEMBL
1 to 21 of 21 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-12 Tmem65  transmembrane protein 65  RGD1563224  similar to 4930438D12Rik protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1563224  similar to 4930438D12Rik protein   RGD1563224_predicted  similar to 4930438D12Rik protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1563224_predicted  similar to 4930438D12Rik protein (predicted)  LOC500874  similar to 4930438D12Rik protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500874  similar to 4930438D12Rik protein      Symbol and Name status set to provisional 70820 PROVISIONAL