Tls2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Tls2 (T-lymphoma susceptibility QTL 2) Rattus norvegicus

Symbol: Tls2
Name: T-lymphoma susceptibility QTL 2
RGD ID: 631529
Trait: thymus integrity trait   (VT:0010555)    
Measurement Type: percentage of study population developing T-cell lymphomas during a period of time   (CMO:0001911)    
LOD Score: 0.0
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8782,111,382 - 132,099,989RGD_MAPPER_PIPELINE
mRatBN7.2780,221,299 - 109,401,111RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0788,365,265 - 119,318,087RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0788,393,619 - 120,429,563RGDRnor5.0
RGSC_v3.4785,090,032 - 137,838,850RGDRGSC3.4
RGSC_v3.1785,110,762 - 137,915,287RGD
Cross Type: backcross
Strains Crossed: F344/NRrrc LEXF/Stm 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
F344/NRrrc  (IEA)
LEXF/Stm  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Propylnitrosourea-induced T-lymphomas in LEXF RI strains of rats: genetic analysis. Lu LM, etal., Br J Cancer 1999 May;80(5-6):855-61.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2324771Snw1-ps2SNW domain containing 1, pseudogene 278014008780332987Rat
1332703Or8i9-ps1olfactory receptor family 8 subfamily I member 9, pseudogene 178051937080519736Rat
1311883Trps1transcriptional repressor GATA binding 178191666882142733Rat
41396341LOC120093649uncharacterized LOC12009364978202511382045293Rat
7567645LOC102548590uncharacterized LOC10254859078223776582247335Rat
7548946LOC102548754uncharacterized LOC10254875478257677982604720Rat
11477543LOC10835158260S ribosomal protein L15 pseudogene78281934482828097Rat
735178Eif3heukaryotic translation initiation factor 3, subunit H78309103783174451Rat
1307179Utp23UTP23, small subunit processome component78318518783196652Rat
1594491Rps16-ps9ribosomal protein S16, pseudogene 978321863783219115Rat
1594529Rad21RAD21 cohesin complex component78328786783314810Rat
41137420LOC120093650uncharacterized LOC12009365078333277383340980Rat
631378Aardalanine and arginine rich domain containing protein78336447883369319Rat
1594490Rps3a-ps6ribosomal protein S3a, pseudogene 678341236983413165Rat
2323224Hmgn2l3high mobility group nucleosomal binding domain 2 like 378352004683520312Rat
1308282Slc30a8solute carrier family 30 member 878359199383627786Rat
41135575LOC120093651uncharacterized LOC12009365178372558483732362Rat
41223521LOC120094032U2 spliceosomal RNA78378336083783437Rat
41050819LOC120093918U6 spliceosomal RNA78379568283795784Rat
41210447LOC120093982small nucleolar RNA SNORA1778379870083798831Rat
1594788Eef1g-ps7eukaryotic translation elongation factor 1 gamma, pseudogene 778393317183934513Rat
1309369Med30mediator complex subunit 3078400473584026474Rat
1594489Ppp2r1b-ps1protein phosphatase 2 scaffold subunit A beta, pseudogene 178425782784259665Rat
1587375Ext1exostosin glycosyltransferase 178437576984654625Rat
41190574Coa6-ps2cytochrome c oxidase assembly factor 6, pseudogene 278473402184744492Rat
41348804Gapdh-ps31Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 3178474473684746963Rat
1561402Samd12sterile alpha motif domain containing 1278476885085064057Rat
41031164LOC120093656uncharacterized LOC12009365678483629384870077Rat
40943775LOC120093986small nucleolar RNA SNORA1778491957684919697Rat
40986003LOC120093655uncharacterized LOC12009365578492961684938592Rat
41335646LOC12009365440S ribosomal protein S25-like78515594385156357Rat
1594488Psmb7-ps2proteasome 20S subunit beta 7, pseudogene 278528695685287689Rat
41171629LOC120093858uncharacterized LOC12009385878538125985394885Rat
619802Tnfrsf11bTNF receptor superfamily member 11B78556652085594526Rat
1307149Colec10collectin subfamily member 1078574489585806368Rat
7507053Gapdh-ps72Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 7278581179285814750Rat
9109499LOC103692934ubiquitin-conjugating enzyme E2 C pseudogene78582632585826798Rat
735066Mal2mal, T-cell differentiation protein 278590045385933433Rat
621553Ccn3cellular communication network factor 378609400086101022Rat
1566354Gapdh-ps95Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9578611280586113417Rat
40939717LOC120093970small nucleolar RNA SNORA4878612446586124606Rat
69298Enpp2ectonucleotide pyrophosphatase/phosphodiesterase 278620234586325050Rat
41167073LOC120093657uncharacterized LOC12009365778632514086332561Rat
621487Taf2TATA-box binding protein associated factor 278642261386479616Rat
1561749Dscc1DNA replication and sister chromatid cohesion 178648258886498212Rat
2321290H3f3cH3 histone, family 3C78650108586502124Rat
1561030DeptorDEP domain containing MTOR-interacting protein78651485986668817Rat
41091710LOC120093932U7 small nuclear RNA78667191886671981Rat
41285670LOC120093939U7 small nuclear RNA78667199086672051Rat
1565732Rpl31-ps5ribosomal protein L31, pseudogene 578668697286687528Rat
1305806Col14a1collagen type XIV alpha 1 chain78672209386937215Rat
9457468Eif1-ps1eukaryotic translation initiation factor 1, pseudogene 178673517886735670Rat
1359587Mrpl13mitochondrial ribosomal protein L1378695154186973147Rat
1565672MtbpMDM2 binding protein78697321587055775Rat
41119759LOC120093658uncharacterized LOC12009365878704169787043506Rat
1307728Sntb1syntrophin, beta 178706092687329315Rat
41102902Trnak-cuu17transfer RNA lysine (anticodon CUU) 1778734897787349051Rat
6487874Rpl13-ps5ribosomal protein L13, pseudogene 578755382387554447Rat
2781Has2hyaluronan synthase 278811332688139337Rat
11378131LOC108351495uncharacterized LOC10835149578813720988141630Rat
1587371Ctnnb1-ps1catenin beta 1, pseudogene 178869826088702180Rat
1304605Slc22a22solute carrier family 22 member 2278872042588750111Rat
1564131Slc25a5l1solute carrier family 25 member 5 like 178880321988804706Rat
41099658Nusap1-ps1nucleolar and spindle associated protein 1, pseudogene 178889526888898116Rat
40985792LOC120093906U6 spliceosomal RNA78917736789177472Rat
727926Zhx2zinc fingers and homeoboxes 278922635889374266Rat
7644388LOC102553568uncharacterized LOC10255356878928907289294246Rat
1311835Derl1derlin 178940441389427095Rat
1587370Tbc1d31TBC1 domain family, member 3178942735489506894Rat
6486559Rpl37a-ps14ribosomal protein L37A, pseudogene 1478943757089438522Rat
7600061Rps27a-ps10ribosomal protein S27a, pseudogene 1078945418289454719Rat
11437639Trnam-cau2transfer RNA methionine (anticodon CAU) 278951287089512942Rat
1565606Fam83afamily with sequence similarity 83, member A78952282689547284Rat
41354571LOC120093813uncharacterized LOC12009381378954876389551517Rat
1310852C7h8orf76similar to human chromosome 8 open reading frame 7678955889089569810Rat
620010Zhx1zinc fingers and homeoboxes 178958236389611337Rat
1586397Rps10-ps16ribosomal protein S10, pseudogene 1678963168989634002Rat
1304849Atad2ATPase family, AAA domain containing 278963412389676738Rat
1311362Ntaq1N-terminal glutamine amidase 178968431889704484Rat
41193271LOC120093937U7 small nuclear RNA78968648889686549Rat
41018428Snora11gsmall nucleolar RNA, H/ACA box 11G78969178289691908Rat
620373Fbxo32F-box protein 3278973142889764997Rat
7724275LOC102549374uncharacterized LOC10254937478979212289798831Rat
1564169Klhl38kelch-like family member 3878985401589864352Rat
1307545Anxa13annexin A1378988435689936907Rat
1586304Fam91a1family with sequence similarity 91, member A178996955890007546Rat
7710569Zcchc9-ps2zinc finger CCHC-type containing 9, pseudogene 278999776890000881Rat
41368912LOC120093660uncharacterized LOC12009366079004013990048215Rat
1564703Fer1l6fer-1-like family member 679009356790216907Rat
1563224Tmem65transmembrane protein 6579033699790378930Rat
41009218LOC120093661uncharacterized LOC12009366179037339690375705Rat
9379903LOC103690428uncharacterized LOC10369042879038484590389902Rat
1562739Dppa3l4developmental pluripotency associated 3 like 479040283290404317Rat
1307127Trmt12tRNA methyltransferase 1279041784690419472Rat
1306670Rnf139ring finger protein 13979043972690450911Rat
1585145Tatdn1TatD DNase domain containing 179044997990481000Rat
1307114Ndufb9NADH:ubiquinone oxidoreductase subunit B979048094890487367Rat
1309883Mtss1MTSS I-BAR domain containing 179048875190628007Rat
41110337LOC120093662uncharacterized LOC12009366279054245290549865Rat
3755Sqlesqualene epoxidase79086797390883623Rat
1564420Washc5WASH complex subunit 579088419290936096Rat
1305156Nsmce2NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase79093611291173435Rat
11483376LOC108351497uncharacterized LOC10835149779119165191198960Rat
1584048LOC690120hypothetical protein LOC69012079120524991206171Rat
621596Trib1tribbles pseudokinase 179120657991213126Rat
41063713LOC120093663uncharacterized LOC12009366379124652491351728Rat
1560979Rps12-ps1ribosomal protein S12, pseudogene79126764591268052Rat
41035867LOC120094053U6 spliceosomal RNA79137067191370777Rat
40934539LOC120093664uncharacterized LOC12009366479142761691449462Rat
41108340Pgam1-ps4phosphoglycerate mutase 1, pseudogene 479148702691487671Rat
15649014933412E24RiklRIKEN cDNA 4933412E24 gene like79161629791618030Rat
41393725LOC120093914U6 spliceosomal RNA79169334391693442Rat
7750896LOC102552490uncharacterized LOC10255249079171694691768010Rat
7665134LOC102552316uncharacterized LOC10255231679174741291753435Rat
1563100Gpd1l2glycerol-3-phosphate dehydrogenase 1 like 279194025891942125Rat
41261377LOC120094056U6 spliceosomal RNA79206798292068087Rat
41222771LOC120093879keratin-associated protein 5-3-like79208875792089368Rat
41311443LOC120093988small nucleolar RNA SNORA1779227354192273672Rat
1564515A1bgl1alpha-1-B glycoprotein like 179231493092318652Rat
1562236Lratd2LRAT domain containing 279237671392387045Rat
7637212Ghitm-ps1growth hormone inducible transmembrane protein, pseudogene 179245969592460814Rat
69417A1bgalpha-1-B glycoprotein79249393492498460Rat
41157576LOC120093667uncharacterized LOC12009366779261620892664552Rat
41366091LOC120093668uncharacterized LOC12009366879286029092892964Rat
41070538LOC120093670uncharacterized LOC12009367079299943793076507Rat
9295089LOC103692925uncharacterized LOC10369292579303137893285485Rat
40975977LOC120093671uncharacterized LOC12009367179323832593252519Rat
40931067Gcm1-ps1glial cells missing transcription factor 1, pseudogene 179326131793262492Rat
41391831LOC120093673uncharacterized LOC12009367379331604693325937Rat
41336997LOC120094054U6 spliceosomal RNA79336014193360247Rat
7683154LOC102547509uncharacterized LOC10254750979346563393487041Rat
41400961LOC120093860phosphomannomutase 1-like79348989393490745Rat
3130MycMYC proto-oncogene, bHLH transcription factor79359370593598633Rat
6496716Pvt1Pvt1 oncogene79365652893879938Rat
41226657LOC120093674uncharacterized LOC12009367479377016193787074Rat
41375551LOC120094019U6atac minor spliceosomal RNA79424665794246771Rat
41108830LOC120094009small nucleolar RNA SNORA1779445709694457229Rat
40959783LOC120093675uncharacterized LOC12009367579451391194565757Rat
7543030Rgs22lregulator of G-protein signalling 22 like79461920794701950Rat
7719983LOC102548624uncharacterized LOC10254862479520888895230371Rat
1587369Idh3b-ps1isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta, pseudogene 179530124495302379Rat
9115372LOC103692910glyceraldehyde-3-phosphate dehydrogenase pseudogene79545070495451612Rat
1308989Gsdmcgasdermin C79559401595606106Rat
1359449Gsdmdl1gasdermin D like 179562005295630546Rat
1307697CyribCYFIP related Rac1 interactor B79563387695760588Rat
41339457LOC120093676uncharacterized LOC12009367679569740995701254Rat
1307379Asap1ArfGAP with SH3 domain, ankyrin repeat and PH domain 179578613096093111Rat
2036Adcy8adenylate cyclase 879641731096665911Rat
1598175Psmb3l3proteasome 20S subunit beta 3 like 379670657996707280Rat
41390682LOC120093969small nucleolar RNA SNORA4879682511896825259Rat
1594487Hspa8-ps9heat shock protein family A (Hsp70) member 8, pseudogene 979690175996904484Rat
41211077LOC120093679uncharacterized LOC12009367979714556297197618Rat
1305976Efr3aEFR3 homolog A79755267797633369Rat
1593441Oc90otoconin 9079763589097669303Rat
15008789Hhla1HHLA1 neighbor of OC9079767094697711308Rat
69222Kcnq3potassium voltage-gated channel subfamily Q member 379773021998025652Rat
11444634Trnak-cuu10transfer RNA lysine (anticodon CUU) 1079805030898050380Rat
1559937Dnaaf11dynein axonemal assembly factor 1179814152598245906Rat
41066261Rabggta-ps2Rab geranylgeranyltransferase subunit alpha, pseudogene 279824576698274427Rat
1593414Tmem71transmembrane protein 7179827697598323161Rat
1560141Phf20l1PHD finger protein 20-like 179833058098396526Rat
41336226LOC120094027U2 spliceosomal RNA79839917098399344Rat
3848Tgthyroglobulin79841829398603210Rat
631373Slasrc-like adaptor79853443198584810Rat
69431Ccn4cellular communication network factor 479864523898677253Rat
1307303Ndrg1N-myc downstream regulated 179868448798725869Rat
7632859LOC102550354uncharacterized LOC10255035479879959198823018Rat
1309373St3gal1ST3 beta-galactoside alpha-2,3-sialyltransferase 179884527098913409Rat
7563506LOC102555324MLV-related proviral Env polyprotein-like79920971699211726Rat
7607396LOC102550565uncharacterized LOC10255056579925710499287329Rat
1592251Hypk-ps1huntingtin interacting protein K, pseudogene 179941289599413276Rat
1594370Nop2-ps3NOP2 nucleolar protein, pseudogene 379944663599449266Rat
1310886Zfatzinc finger and AT hook domain containing799886954100054288Rat
40928179LOC120093680uncharacterized LOC1200936807100100814100116285Rat
7751266LOC102551574uncharacterized LOC1025515747100102553100159947Rat
2325392Mir30bmicroRNA 30b7100132589100132675Rat
2325589Mir30dmicroRNA 30d7100136391100136472Rat
1564548H3-7lH3.7 histone like7100253160100257870Rat
41069368Calm1-ps1calmodulin 1, pseudogene 17100467800100468244Rat
41057908Tox4-ps1TOX high mobility group box family member 4, pseudogene 17100628756100635603Rat
620921Khdrbs3KH RNA binding domain containing, signal transduction associated 37100837707100995644Rat
11479082LOC108351507uncharacterized LOC1083515077100977899100982865Rat
1585982R3hdm2-ps2R3H domain containing 2, pseudogene 27101184273101187188Rat
41311854LOC120094008small nucleolar RNA SNORA177101325223101325349Rat
41089210LOC120093934U7 small nuclear RNA7101328875101328934Rat
41147028LOC120093935U7 small nuclear RNA7102247197102247258Rat
1562153Rps19l1ribosomal protein S19-like 17102435651102436279Rat
2324751Fcf1-ps3Fcf1 rRNA-processing protein, pseudogene 37103065074103065683Rat
11406708Trnap-agg8transfer RNA proline (anticodon AGG) 87103365474103365547Rat
1308133Fam135bfamily with sequence similarity 135, member B7103380981103649802Rat
41389968Trnav-aac32transfer RNA valine (anticodon AAC) 327103459299103459371Rat
41028520Hmgn4-ps2high mobility group nucleosomal binding domain 4, pseudogene 27103596895103602401Rat
1309081Col22a1collagen type XXII alpha 1 chain7103730939103968452Rat
11486846LOC108351508uncharacterized LOC1083515087103732592103735810Rat
40931729LOC120094038small nucleolar RNA U37104110727104110918Rat
621451Kcnk9potassium two pore domain channel subfamily K member 97104429186104473924Rat
1309461Trappc9trafficking protein particle complex subunit 97104521593104998352Rat
40972395LOC120093940U7 small nuclear RNA7104652170104652234Rat
1309321Chrac1chromatin accessibility complex subunit 17105013047105016435Rat
621255Ago2argonaute RISC catalytic component 27105018202105105118Rat
3443Ptk2protein tyrosine kinase 27105126725105331848Rat
2325400Mir151microRNA 1517105172377105172473Rat
4888536Mir151bmicroRNA 151b7105172377105172496Rat
40981668LOC120093952small nucleolar RNA SNORA87105272233105272369Rat
1564268Rpl36l1ribosomal protein L36 like 17105381415105381903Rat
1311559Dennd3DENN domain containing 37105415870105473583Rat
1309971Slc45a4solute carrier family 45, member 47105478886105550160Rat
620034Gpr20G protein-coupled receptor 207105601761105611959Rat
40948151LOC120094044U4 spliceosomal RNA7105633514105633676Rat
1308687Ptp4a3protein tyrosine phosphatase 4A37105650640105660921Rat
1559695Mroh5maestro heat-like repeat family member 57105662737105737820Rat
1562139Rpl29l5ribosomal protein L29 like 57105805032105805521Rat
9421138Tsnare1t-SNARE domain containing 17106226056106407308Rat
1305608Adgrb1adhesion G protein-coupled receptor B17106404827106476902Rat
7630205LOC102550505uncharacterized LOC1025505057106476905106480701Rat
7728252LOC102550355uncharacterized LOC1025503557106479468106511009Rat
1311993Mroh4maestro heat-like repeat family member 47106491305106535473Rat
41134950LOC120093909U6 spliceosomal RNA7106541474106541580Rat
62037Arcactivity-regulated cytoskeleton-associated protein7106555968106559697Rat
1306316JrkJrk helix-turn-helix protein7106590662106595345Rat
1594221Pscaprostate stem cell antigen7106598203106603114Rat
1359378Them6thioesterase superfamily member 67106606570106609747Rat
1308768Slurp1secreted Ly6/Plaur domain containing 17106611949106613365Rat
1307892Lypd2Ly6/Plaur domain containing 27106617561106619598Rat
1308195Slurp2secreted Ly6/Plaur domain containing 27106627775106631655Rat
1312017Lynx1Ly6/neurotoxin 17106632800106638003Rat
1306132Ly6dlymphocyte antigen 6 family member D7106643225106644733Rat
41027941LOC120093891lymphocyte antigen 6D-like7106653721106661132Rat
1307850Gmlglycosylphosphatidylinositol anchored molecule like7106683749106712802Rat
2322953Ly6klymphocyte antigen 6 family member K7106683749106712802Rat
1593012Cyp11b1-ps1cytochrome P450, family 11, subfamily b, polypeptide 1, pseudogene 17106718410106724483Rat
41382688Cyp11b2l1cytochrome P450, family 11, subfamily b, polypeptide 2 like 17106724638106751822Rat
2453Cyp11b1cytochrome P450, family 11, subfamily b, polypeptide 17106772597106780536Rat
727886Cyp11b3cytochrome P450, family 11, subfamily b, polypeptide 37106808559106814048Rat
40929868Timm8a1-ps2translocase of inner mitochondrial membrane 8A1, pseudogene 27106815172106815466Rat
2454Cyp11b2cytochrome P450, family 11, subfamily b, polypeptide 27106838590106845004Rat
2324576Ly6mlymphocyte antigen 6 family member M7106863167106867047Rat
1565342Ly6elymphocyte antigen 6 family member E7106935530106939689Rat
621266Ly6cLy6-C antigen7106959508106963329Rat
1586182Ly6al1lymphocyte antigen 6 complex, locus A like 17107011585107018125Rat
628818Ly6ilymphocyte antigen 6 complex, locus I7107062320107067743Rat
11419888LOC108351510uncharacterized LOC1083515107107069127107107867Rat
1565410Ly6cl1Ly6-C antigen like 17107122197107163755Rat
40992931LOC120093684lymphocyte antigen 6L-like7107141473107147521Rat
1307571Ly6alymphocyte antigen 6 family member A7107177191107189436Rat
1597652Ly6llymphocyte antigen 6 family member L7107220612107222692Rat
1311896Ly6hlymphocyte antigen 6 family member H7107258779107261270Rat
1564237Gpihbp1glycosylphosphatidylinositol anchored high density lipoprotein binding protein 17107285584107288702Rat
1307587Zfp41zinc finger protein 417107307303107320164Rat
1560906Gli4GLI family zinc finger 47107325584107330911Rat
1303177Top1mtDNA topoisomerase I mitochondrial7107338092107368125Rat
1305688Rhpn1rhophilin, Rho GTPase binding protein 17107391948107402713Rat
41247952LOC120093904U6 spliceosomal RNA7107423495107423601Rat
1562627MafaMAF bZIP transcription factor A7107432292107435084Rat
1307276Zc3h3zinc finger CCCH type containing 37107440694107525451Rat
41268187LOC120093992small nucleolar RNA SNORA177107446145107446279Rat
1307261Gsdmdgasdermin D7107542489107547051Rat
2323632Mroh6maestro heat-like repeat family member 67107566212107576469Rat
1302945Naprtnicotinate phosphoribosyltransferase7107576645107580102Rat
621174Eef1deukaryotic translation elongation factor 1 delta7107581930107596735Rat
1311576Tigd5tigger transposable element derived 57107596724107599243Rat
1309115Pycr3pyrroline-5-carboxylate reductase 37107603543107608831Rat
1307028GfusGDP-L-fucose synthase7107612087107617005Rat
7635192Zfp623zinc finger protein 6237107627334107636254Rat
41044122LOC120093815uncharacterized LOC1200938157107641619107650169Rat
1562665Zfp707l1zinc finger protein 707-like 17107650517107661335Rat
1311188Zfp707zinc finger protein 7077107679597107686556Rat
1588167Ccdc166coiled-coil domain containing 1667107693572107695375Rat
628675Mapk15mitogen-activated protein kinase 157107694907107714640Rat
1305866Fam83hfamily with sequence similarity 83, member H7107716431107724619Rat
1563870Iqank1IQ motif and ankyrin repeat containing 17107724962107759163Rat
1565055Scribscribble planar cell polarity protein7107759343107782364Rat
7653288LOC102548315uncharacterized LOC1025483157107782568107789583Rat
621674Puf60poly-U binding splicing factor 607107782799107793759Rat
1591749Nrbp2nuclear receptor binding protein 27107798642107805225Rat
1587023Eppk1epiplakin 17107816919107842946Rat
1587008Dstl1dystonin like 17107838089107847304Rat
7634850LOC102548374uncharacterized LOC1025483747107854542107871168Rat
621649Plecplectin7107887764107949100Rat
7744876Parp10poly (ADP-ribose) polymerase family, member 107107949031107958377Rat
628873Grinaglutamate ionotropic receptor NMDA type subunit associated protein 17107962194107965372Rat
41312805LOC120093816uncharacterized LOC1200938167107974652107982766Rat
1565316Spatc1spermatogenesis and centriole associated 17107980857108007716Rat
40991677Trnal-aag12transfer RNA leucine (anticodon AAG) 127108005044108005124Rat
2323312Smpd5sphingomyelin phosphodiesterase 57108009182108011767Rat
620956Oplah5-oxoprolinase (ATP-hydrolysing)7108011472108051751Rat
1310986Exosc4exosome component 47108047831108050573Rat
1303197Gpaa1glycosylphosphatidylinositol anchor attachment 17108051896108055479Rat
1306597Cyc1cytochrome c-17108067106108069483Rat
631353SharpinSHANK-associated RH domain interactor7108070681108075012Rat
1359315Maf1MAF1 homolog, negative regulator of RNA polymerase III7108075173108078252Rat
1562063Wdr97WD repeat domain 977108078280108087028Rat
1359226Hgh1HGH1 homolog7108091918108094740Rat
1308613Tssk5testis-specific serine kinase 57108094836108102557Rat
1642414Mroh1maestro heat-like repeat family member 17108098708108172146Rat
41036871LOC120093924U6 spliceosomal RNA7108137837108137943Rat
1310589Bop1BOP1 ribosomal biogenesis factor7108172062108195875Rat
1588254Scxscleraxis bHLH transcription factor7108176608108178626Rat
620913Hsf1heat shock transcription factor 17108196040108223011Rat
628673Dgat1diacylglycerol O-acyltransferase 17108223860108235413Rat
1306236Scrt1scratch family transcriptional repressor 17108240986108244636Rat
1560410Slc52a2solute carrier family 52 member 27108246003108267642Rat
41317711Trnap-agg52transfer RNA proline (anticodon AGG) 527108251403108251483Rat
6496784Tmem249transmembrane protein 2497108256535108259429Rat
1359687Fbxl6F-box and leucine-rich repeat protein 67108259097108262528Rat
1305504Adck5aarF domain containing kinase 57108301623108319439Rat
1306406Cpsf1cleavage and polyadenylation specific factor 17108319429108330018Rat
1306701Slc39a4solute carrier family 39 member 47108333368108337553Rat
1306537Vps28VPS28 subunit of ESCRT-I7108341989108345837Rat
1307483Tonsltonsoku-like, DNA repair protein7108345704108360792Rat
11425062Zftraf1zinc finger TRAF type containing 17108363989108377428Rat
152995352Tmem276-zftraf1Tmem276-zftraf1 readthrough7108363989108380435Rat
2318728Tmem276Transmembrane protein 2767108378569108380453Rat
735021Kifc2kinesin family member C27108380634108388364Rat
1311275Foxh1forkhead box H17108387969108391566Rat
1307962Ppp1r16aprotein phosphatase 1, regulatory subunit 16A7108391664108414812Rat
621720Gptglutamic--pyruvic transaminase7108416646108419495Rat
1560274Mfsd3major facilitator superfamily domain containing 37108419644108423469Rat
1307732Recql4RecQ like helicase 47108423453108430790Rat
1560202Lrrc14leucine rich repeat containing 147108430755108437118Rat
1308720Lrrc24leucine rich repeat containing 247108437296108444561Rat
1359663C7h8orf82similar to human chromosome 8 open reading frame 827108443772108446116Rat
1593158Arhgap39Rho GTPase activating protein 397108446280108538875Rat
1311138Zfp251zinc finger protein 2517108568564108598593Rat
1310636Zfp7zinc finger protein 77108598666108615740Rat
41212471LOC120093953U1 spliceosomal RNA7108600658108600820Rat
621468Commd5COMM domain containing 57108621766108623616Rat
619827Rpl8ribosomal protein L87108626194108628485Rat
1308203Zfp647zinc finger protein 6477108632248108649264Rat
7613843Znf16l-ps1Zinc finger protein 16 like, pseudogene 17108650889108670242Rat
1597990C7h8orf33similar to human chromosome 8 open reading frame 337108682122108684372Rat
620411Mbmyoglobin7108759903108767134Rat
1311838Rbfox2RNA binding fox-1 homolog 27108810627109054420Rat
41017484LOC120093818uncharacterized LOC1200938187109107379109114380Rat
11460844Apol7al1apolipoprotein L7a like 17109118559109149798Rat
401950492Apol9a-Apol7aApol9a-Apol7a readthrough7109118559109149798Rat
1562332Apol9aapolipoprotein L9a7109140871109149799Rat
1565356Apol7b-ps1apolipoprotein L7b, pseudogene 17109156746109175642Rat
41279919LOC120093819apolipoprotein L3-like7109179086109187091Rat
41340728LOC120093820uncharacterized LOC1200938207109211976109215812Rat
2318353Pole3-ps3DNA polymerase epsilon 3, accessory subunit, pseudogene 37109236108109236813Rat
1309798Apol11aapolipoprotein L11a7109248260109262266Rat
1306480Apol3l1apolipoprotein L3 like 17109288725109297728Rat
1309808Apol7bl1apolipoprotein L7b like 17109304895109322867Rat
1309591Apol2apolipoprotein L27109331367109338632Rat
3140Myh9myosin, heavy chain 97109343718109424457Rat
7747383LOC102552424uncharacterized LOC1025524247109264051109268818Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10427D7Wox192577106839225106839474Ratregion
10431D7Wox182507106741074106741295Ratregion
10431D7Wox182507106773255106773476Ratregion
10935D7Wox1413179359564793595780Ratregion
10936D7Arb520479359562793595833Ratregion
10937D7Wox1515979359562093595781Ratregion
10938D7Wox2911979359563393595754Ratregion
10939D7Mit2721079359563193595843Ratregion
33969D7Mit423979481108594811326Ratregion
34555D7Mgh614879141244491412594Ratregion
34713D7Mgh1623679125631191256547Ratregion
33648D7Mit513778022129980221436Ratregion
33749D7Mit325679973595699736220Ratregion
36015D7Rat2115579128113091281285Ratregion
37374D7Rat991997104237839104238038Ratregion
35264D7Rat1814879801139698011544Ratregion
36932D7Rat1714879479587794796025Ratregion
37642D7Rat11224678519688685197132Ratregion
37710D7Rat19018879032403890324226Ratregion
37760D7Rat591627109150206109150368Ratregion
37808D7Rat8612078315339283153512Ratregion
37814D7Rat1001977100865992100866189Ratregion
36442D7Rat2015778986737689867533Ratregion
36661D7Rat151717101772987101773158Ratregion
35110D7Rat1416979609007796090246Ratregion
35787D7Rat4217478400154684001720Ratregion
35841D7Rat1917679324212393242280Ratregion
35845D7Rat161407102920123102920263Ratregion
39702D7Rat16012179350828593508404Ratregion
39938D7Rat14111778359195383592070Ratregion
39956D7Rat1311907106074002106074194Ratregion
40472D7Rat1762257105399233105399458Ratregion
40036D7Rat1371737100005580100005753Ratregion
40068D7Rat16117578400599684006171Ratregion
40116D7Rat16229378255597082556263Ratregion
40348D7Rat14015678989811689898272Ratregion
38886D7Rat962017102322484102322685Ratregion
39058D7Rat532197100874472100874685Ratregion
39144D7Rat882097108555044108555253Ratregion
39254D7Rat671777105699315105699492Ratregion
39464D7Rat1382007102714177102714373Ratregion
39464D7Rat1382007102714177102714575Ratregion
39468D7Rat1591207100963583100963703Ratregion
42207D7Arb123227106010152106010474Ratregion
42209D7Arb1320279747473097474932Ratregion
42213D7Arb1522179141238991412612Ratregion
42836D7Rat20222679113987691140102Ratregion
41186D7Rat13917478492790684928080Ratregion
42342D7Rat23116479075610990756271Ratregion
42343D7Rat21824879588575695886004Ratregion
40784D7Rat1351617102297359102297520Ratregion
40900D7Rat13422579841863998418864Ratregion
40966D7Rat1331597103945484103945643Ratregion
41130D7Rat1361807102228765102228945Ratregion
44272D7Got5815978337455083374709Ratregion
44273D7Got5913978394715283947291Ratregion
44274D7Got6124578528769785287942Ratregion
44275D7Got6022578591358585913810Ratregion
44275D7Got6022578591358585913810Ratregion
44277D7Got6920678878793388788139Ratregion
44278D7Got15021378696127186961484Ratregion
44279D7Got6714278891620788916351Ratregion
44282D7Got7817079844989898450068Ratregion
44283D7Got851437100006584100006727Ratregion
44284D7Got8123579796087097961107Ratregion
44285D7Got822297100749587100749814Ratregion
44286D7Got861497101283261101283410Ratregion
44288D7Got7520279273463492734836Ratregion
44289D7Got7211979083629190836410Ratregion
44290D7Got7320779099577390995980Ratregion
44292D7Got7120179130026791300468Ratregion
44293D7Got921307106539052106539184Ratregion
44294D7Got941977106100259106100454Ratregion
44295D7Wox61427106108321106108463Ratregion
44296D7Got892017102714117102714318Ratregion
44296D7Got892017102714117102714575Ratregion
44296D7Got892017102714262102714318Ratregion
44298D7Got901737103523502103523675Ratregion
44299D7Got882187102969204102969422Ratregion
44300D7Got93857106484369106484454Ratregion
44301D7Got952027107539708107539910Ratregion
44302D7Got871107102741501102741611Ratregion
44303D7Got961327107392709107392841Ratregion
44304D7Got971247109094323109094447Ratregion
44306D7Got981747109265344109265490Ratregion
60584D7Got6224278641483086415072Ratregion
60586D7Got6429978797287187973170Ratregion
60589D7Got7019079631961696319806Ratregion
60590D7Got7918379992957099929753Ratregion
60567D7Got1511217104996442104996561Ratregion
60818D7Wox2813178915715689157281Ratregion
67821D7Uwm1217378111622981116402Ratregion
67824D7Uwm1315578519875985198911Ratregion
67828D7Uwm1528378855769688557979Ratregion
67829D7Uwm1618478974027389740457Ratregion
67830D7Uwm1725778979838889798645Ratregion
625818D7Got5720578095578480955989Ratregion
62494D7Uia12987103146217103146515Ratregion
629616D7Hmgc316878556775485567922Ratregion
66593D7Mco120779973598299736187Ratregion
67237D7Arb113177108446301108446618Ratregion
1630091D7Mco142897105991638105991927Ratregion
1630132D7Mco132927106079598106079890Ratregion
1631297D7Got215917102915988102916080Ratregion
1631395D7Got2481597100749627100749784Ratregion
1631724D7Mco112367106064796106065032Ratregion
1626928D7Mco243497106701452106701801Ratregion
1627028D7Mco202577106581668106581925Ratregion
1627389D7Mco232677106681370106681637Ratregion
1627404D7Mco192587106571501106571759Ratregion
1627428D7Mco212257106618511106618736Ratregion
1627463D7Mco182317106412447106412678Ratregion
1627493D7Mco222877106671821106672108Ratregion
1628923D7Got2411067104593739104593845Ratregion
1638601D7Mco94607105985375105985835Ratregion
1638745D7Got25921379173768291737895Ratregion
1638909D7Wox4221179125631191256522Ratregion
1639323D7Got2161777104542858104543037Ratregion
1633261D7Got2171397104931313104931452Ratregion
1639954D7Mco122087106023527106023735Ratregion
1635190D7Mco153487106010163106010511Ratregion
1636302D7Mco173057106065119106065424Ratregion
1633665D7Wox461737106845277106845450Ratregion
7205768UniSTS:22471215578730177787301932Ratregion
7206010Maf2357108077260108077495Ratregion
7193132MYC29079359646193597750Ratregion
7192370Nov10478609443686095889Ratregion
7192489Myc28079359599893596278Ratregion
7205758stSG6244665587101076225101076783Ratregion
7206730stSG60748507101953998101954302Ratregion
7206730stSG60748507101954033101954302Ratregion
7206466Trps170078209987482100574Ratregion
7206478Hsf12987108220039108220337Ratregion
7206488UniSTS:54663289979666502896665927Ratregion
5035939PMC314332P139478811579588116189Ratregion
5036185D15Wsu169e07108446283108446515Ratregion
5038844RH1273651907107401425107401615Ratregion
5036290Ext114378437676484376907Ratregion
5036306Foxh13457108389162108389507Ratregion
5036490Sla9679853618598536281Ratregion
5039052RH1274851907107011671107011862Ratregion
5039052RH1274851907107062406107062596Ratregion
5035502AI22972016778336842583368592Ratregion
5035506EST3C713079045021790450347Ratregion
5028639RH1257142567108813975108814231Ratregion
5028651RH1258232197108069253108069472Ratregion
5031392PMC156147P114379359589493596037Ratregion
5034103RH1413731847108423264108423448Ratregion
5034131RH14148018078950667689506856Ratregion
5026158RH1311362187105018318105019995Ratregion
5026172RH131190078474399484744223Ratregion
5026218RH13136718078329371283293892Ratregion
5028905RH14277026779102333191023598Ratregion
5034183RH1416834507108259660108260110Ratregion
5031792AU04713125378518351985183774Ratregion
5034434BF4089831137105716625105716738Ratregion
5026730RH13331818878620255786202745Ratregion
5032082D15Mit18317678659185586592031Ratregion
5032289AI79039513678426145484261590Ratregion
5032309AI44731011578191971081919825Ratregion
5026942RH13412618179120535491205535Ratregion
5027038RH13449419778693687886937075Ratregion
5029607BF38623415179891015498910305Ratregion
5032419C86064897106556107106556196Ratregion
5035368BE1057671647107600559107600723Ratregion
5032593RH1345781947100995253100995447Ratregion
7364928rs198562267079067766190677661Ratregion
7364929rs199006987079275581492755814Ratregion
5029941BF40003513579796386097963995Ratregion
5030037AW53102815678457744084577596Ratregion
5030055AW5314921517108437385108437536Ratregion
5032701RH1349791817107636074107636255Ratregion
5027489AW0608689279641752496417616Ratregion
5027643BB023497887107401427107401515Ratregion
5027755RH946141257109344893109345018Ratregion
5033137RH13773415478328853983288693Ratregion
5033515RH1391101307105165886105166016Ratregion
5025492RH1285281837108446560108446743Ratregion
5028173D15Mit1714779359563293595781Ratregion
5030727BF4109191977105601805105602002Ratregion
5030765BF40494218478189656781896751Ratregion
5025732RH12944618079359827293598452Ratregion
5033719RH1398662147100120563100120777Ratregion
5033735RH13992619478936517789365371Ratregion
5028567C7689123279763190297632134Ratregion
5028567C7689123279763190297632134Ratregion
5028569AU0416862997108333545108333844Ratregion
5055143RH1436301007107432404107432504Ratregion
5051268RH1345362027108759948108760150Ratregion
5051306RH1264518579563577195635956Ratregion
5053667RH14278113879387820593878343Ratregion
5053687RH14279313078642267286422802Ratregion
5056055RH14415716879773071297730880Ratregion
5056065RH1441622107104558105104558315Ratregion
5056291RH1442941567108455397108455553Ratregion
5056359RH1443331027108248502108248604Ratregion
5051563AW5522761247105482210105482334Ratregion
5053941RH1429392287105526100105526328Ratregion
5051895RH9472020079359843893598638Ratregion
5054113RH1430381197108650736108650855Ratregion
5054349RH14317310279772520797725309Ratregion
5057500AI03093910179839431998394420Ratregion
5055209RH14366919179120664091206831Ratregion
5054475RH1432451567108451370108451526Ratregion
5054541RH1432841307107740885107741015Ratregion
5054869RH14347226879366373693664004Ratregion
5054897RH1434871487108165504108165652Ratregion
5055171RH1436471007107580000107580100Ratregion
5058720BE10238017679773059997730775Ratregion
5059700BE0976611887107601316107601504Ratregion
5056113RH14419020179053282490533025Ratregion
5056557RH1444471227107437459107437581Ratregion
5055277RH14370820778397328483973491Ratregion
5055277RH14370820778397328483974574Ratregion
5055395RH1437771377108465688108465825Ratregion
5059738AI5568332187108264848108265066Ratregion
5059810BE09795020479000218690002390Ratregion
5059862BF40000522079062253490622754Ratregion
5055549RH1438651277108682197108682324Ratregion
5058306BF38699715479772150297721656Ratregion
5058342AA8595292127108224027108224239Ratregion
5059096BF3874901547104858975104859129Ratregion
5059214BF3876831707107835619107835789Ratregion
5050152RH13389221978319327183194542Ratregion
5050142RH13388618979086843590868624Ratregion
5050208RH13392420579048923990489444Ratregion
5050274RH13396221578705974987059964Ratregion
5050540RH1341151927107603551107603743Ratregion
5050648RH13417818178328793283288113Ratregion
5050722RH1342202107108568582108568792Ratregion
5051557AV32815212278336916183369283Ratregion
5051561AW5462471177105021015105021132Ratregion
5050824RH1342792087108378741108378949Ratregion
5041700RH1290082077107612117107612324Ratregion
5044836RH1308311967106602850106603046Ratregion
5043648RH13014620278693589286936094Ratregion
5043728RH13019318679868453998684725Ratregion
5043846RH13026120579868457198684776Ratregion
5045068RH1309651877105127140105127327Ratregion
5045812RH1313931807108586438108586618Ratregion
5045952RH13147420379641534696415549Ratregion
5041698RH12900720879000724990007457Ratregion
5041710RH1290141837107965158107965341Ratregion
5041728RH1290242887107581944107582232Ratregion
5041732RH1290261577104521599104521756Ratregion
5044594RH13069321779836115198361368Ratregion
5046366RH1317112187107432530107432748Ratregion
5046376RH13171720379868753998687742Ratregion
5044504RH13064119078593163585931825Ratregion
5045420RH13116819379578790095788093Ratregion
5045446RH1311821517108346114108346265Ratregion
5045492RH1312091957105481946105482141Ratregion
5046520RH1318001807108333376108333556Ratregion
5047516RH13237221878940533889405556Ratregion
5045184RH1310321957107949161107949356Ratregion
5045224RH1310552117109122052109122263Ratregion
5049070RH13326921478958282289583036Ratregion
5045928RH1314601987108050941108051139Ratregion
5048106RH13271121879853456798534785Ratregion
5049416RH13346820578973041289730617Ratregion
5047020RH1320882207108623010108623230Ratregion
5048322RH13283621179882230698822517Ratregion
5042020RH12919218679048880890488994Ratregion
5047308RH1322531867107798814107799000Ratregion
5047374RH1322902147107657067107657281Ratregion
5047374RH1322902147107686305107686519Ratregion
5048466RH1329201857107319830107320015Ratregion
5039968RH1280122777108070892108071169Ratregion
5042440RH12943518778695158586951772Ratregion
5048562RH13297519879839615298396350Ratregion
5040336RH1282252137105126949105127162Ratregion
5043188RH12988219878972597289726170Ratregion
5039692RH1278521937107716472107716665Ratregion
5042514RH1294791857107887856107888041Ratregion
5041258RH12875315479115841291158566Ratregion
5043738RH13019821179088336390883574Ratregion
5043746RH13020320379839378698393989Ratregion
5040480RH12830718178963424589634426Ratregion
5073922RH13771614879003330890033456Ratregion
5075348RH13854316978985942089859589Ratregion
5075538RH13865113478940463489404768Ratregion
5075640RH1387117497108067121108067870Ratregion
5075812RH1388111307105477644105477774Ratregion
5074272RH1379211417106556035106556176Ratregion
5075922RH13887414678308700083087146Ratregion
5076752RH139358877109342131109342218Ratregion
5076964RH13948121778328853983288756Ratregion
5075408RH1385771547108319215108319369Ratregion
5074832RH1382442147108011466108011680Ratregion
5080572RH1416572097108093765108093974Ratregion
5080622RH14168618379565078695650969Ratregion
5077242RH13964418178475785884758039Ratregion
5077676RH13989320278610069586100897Ratregion
5077702RH13990818578319642083196605Ratregion
5075668RH13872717878437661184376789Ratregion
5075858RH1388381437107338328107338471Ratregion
5077868RH14000618379576251695762699Ratregion
5079738RH14117520379853518498535387Ratregion
5079798RH1412092157107782970107783185Ratregion
5079804RH14121321079827776498277974Ratregion
5079818RH14122120878972797289728180Ratregion
5079894RH1412641947105021016105021210Ratregion
5079900RH14126720979944667399446882Ratregion
5079900RH14126720979944667399446882Ratregion
5080058RH14135918179041913690419317Ratregion
5078926RH14063218079433522094335400Ratregion
5080198RH14144121379881187498812087Ratregion
5078366RH1403001837108436677108436860Ratregion
5078468RH1403601727107341081107341253Ratregion
5079040RH14070021878704175887042088Ratregion
5079148RH14076316279772520197725363Ratregion
5070680RH1346421837106612045106612228Ratregion
5070804RH1347151977108419461108419658Ratregion
5079312RH14090918379884536698845549Ratregion
5070914RH1347792137105015967105016180Ratregion
5073486RH13746420079033787290338072Ratregion
5073694RH1375851757106636212106636387Ratregion
5073006RH13718020578940324089403445Ratregion
5074110RH1378271457106161963106162108Ratregion
5070862RH13474818578954779889547983Ratregion
5073454RH1374452177109140932109141149Ratregion
5071450RH1350892187107661099107661313Ratregion
5071450RH1350892187107704176107704394Ratregion
5072438RH13684915379033637590336528Ratregion
5072462RH13686318179884536698845547Ratregion
5074728RH1381841737105230462105230635Ratregion
5071696RH13523119579988705499887249Ratregion
5061762AW53327122079837433098374550Ratregion
5066732AU0481831697104383789104383958Ratregion
5067506AU04770316879602792496028001Ratregion
5067590AU04763721379295591392956126Ratregion
5067726AU04757324379031844290318681Ratregion
5067898AU04747028778059999280600275Ratregion
5068118AU0473371277109227916109228043Ratregion
5068508AU04710328078787799087878270Ratregion
5068626AU04703112979208092092081049Ratregion
5068634AU0470272537101569654101569907Ratregion
5068688AU04699410878213196582132073Ratregion
5070029RH9442616178811470688114867Ratregion
5069074AU04674117479773653697736823Ratregion
5069074AU04674117479773664997736823Ratregion
5070394AI8430661107108446504108446614Ratregion
5070478AI7897511717107011792107011963Ratregion
5069222AU0466387879324205193242129Ratregion
5069312AU04658129679269776692698057Ratregion
5062098BF3974371567109017481109017637Ratregion
5065126BF40599924878494481784945065Ratregion
5060408BE09801518779089012690890313Ratregion
5060570BE11041017379988750299887675Ratregion
5062270BE1064541787108612661108612839Ratregion
5065490BI3032241687105473372105473540Ratregion
5065638BE1095161947108424081108424275Ratregion
5065656BF4127121897107589828107590017Ratregion
5060072BF3884121937108814076108814269Ratregion
5060312BG3786611507105102479105102629Ratregion
5062100BF39744115578936998389370138Ratregion
5063546BE10777115079082217090822320Ratregion
5063744BF40496724479104380391044047Ratregion
5060442BE1100781627107402497107402659Ratregion
5064154BE1206781877108166116108166303Ratregion
5065602BF40600620579587951695879721Ratregion
5062638BF40363616779762639697626563Ratregion
5062794AW5344651857103730968103731153Ratregion
5065860AI0458361857108388093108388278Ratregion
5061078AW5321121867103731430103731616Ratregion
5062832AA9551211297109331367109331496Ratregion
5066240PMC124472P19267107433764107434690Ratregion
5063140BI30134218278819538288195564Ratregion
5063192BI2894481557107598873107599028Ratregion
5063242BI30156918379526177395261956Ratregion
5063290BI30167319379758462297584815Ratregion
5066538AU0482971667103272041103272207Ratregion
5061514BE10538017878476908084769258Ratregion
5084186AI1763391097108172034108172143Ratregion
5086947BQ2067351527107227557107227708Ratregion
5086969BQ1941471917106643337106643528Ratregion
5082083BF41597812778516467985164806Ratregion
5082225BI2808462107108094312108094522Ratregion
5086125BM38468915978192148481921643Ratregion
5087225AW5307431947108437071108437265Ratregion
5087289AW5308042187108397524108397742Ratregion
5087436PMC165967P540879359619593596603Ratregion
5082491BE1195302067107796741107796947Ratregion
5082643BE1199141647100839897100840061Ratregion
5086471AA89165014578475776584757910Ratregion
5089767AU0493511747105337652105337826Ratregion
5082697BF41666519979800238098002579Ratregion
5082945BF3904612147104738506104738720Ratregion
5087434PMC165967P432379359285293593175Ratregion
5087438PMC165967P643079359788793598317Ratregion
5087863UniSTS:1430676597105126912105127571Ratregion
5089153AU04898610779586315995863192Ratregion
5089153AU0489861077108114524108114557Ratregion
5083447BF3912761347106275939106276073Ratregion
5083463BE10011918179121335191213532Ratregion
5083517BE1003531507107816978107817128Ratregion
5089487AU04918529479679729596797589Ratregion
5089519AU0492041897103902424103902615Ratregion
5089545AU04921919078349123183491421Ratregion
5090657AU0498841367102741495102741631Ratregion
5083938AA893273917107143928107144019Ratregion
5083938AA893273917107222585107222676Ratregion
5084136AI1690021807107603830107604010Ratregion
5081649BE11785715079867386298674012Ratregion
5090279AU0496561777101072720101072897Ratregion
5084274AI1758481267107342580107342706Ratregion
5087211AW5241289079049032490490414Ratregion
5082075BF41592721578674492886745143Ratregion
5084830AI4109301507107576614107576764Ratregion
5082201BI2806751627108094439108094601Ratregion
5082321BE11918318779107738691077573Ratregion
5090671AU04989118978814454788144736Ratregion
5088413AU04855417578473404684734221Ratregion
5080758RH14176519079128429491284484Ratregion
5081224RH1420361977109248292109248489Ratregion
5090009AU04949611178408303184083142Ratregion
5082677BE1199871617107766848107767009Ratregion
5084472AI1696172027108172162108172364Ratregion
5082973BF39052620079787758197877781Ratregion
5086163BM3861352037108096238108096441Ratregion
5086205AI2328721597108025995108026154Ratregion
5081238RH14204520778943929589439502Ratregion
5081254RH14205419178438020884380399Ratregion
5084960AI2374121627109156794109156956Ratregion
5083093BF3907951507100603593100603743Ratregion
5086614AW53002915178331664083316791Ratregion
5081430AI5478102747108319636108319910Ratregion
5085171BM3898301727106350633106350805Ratregion
5085256BM3900041777106292356106292533Ratregion
5085288AI5985131527107315480107315632Ratregion
5083675BF4180281077104433963104434070Ratregion
5081871BI27390720378610438786104590Ratregion
5081977BE11895615078938383889383988Ratregion
5083741AA8915511487108684010108684158Ratregion
5083940AA89327611678437238084372496Ratregion
5134358D7Uwm2528378113417481134459Ratregion
5134360D7Uwm262777100132762100133039Ratregion
5503061Ctnnb137778869949688699873Ratregion
5503082Nov12278609427886094400Ratregion
5503360D4Mon418979686241696862505Ratregion
5507513ECD1222555078465396084654510Ratregion
5507515ECD1283052978465454884655077Ratregion
5503224UniSTS:23729731978940562489405943Ratregion
5503228UniSTS:23730420879238638092386588Ratregion
5503892Hsh22378811577188115994Ratregion
5503879MB1977108761978108762175Ratregion
5507680Hspa893179690178296902713Ratregion
5504606PMC313795P13457108389162108389507Ratregion
5504722PMC84535P37767105161342105162120Ratregion
5504815ha2170078533471085336306Ratregion
5504720PMC84535P19847105161304105162290Ratregion
5505142Mafa1047107433971107434075Ratregion
5505306Ppp2r1b39178425913984259515Ratregion
5505442Fam83h5397107718242107718781Ratregion
5506076UniSTS:49830023478393359083933824Ratregion
5506393UniSTS:4791539787108319646108320624Ratregion
5506987fd54e08.x1116879031757790318746Ratregion
5500232AV3393071247108568594108568719Ratregion
5501137PMC148819P429079359764593597935Ratregion
5500767REN1333124778465398984654236Ratregion
5500763REN1332925578465443884654693Ratregion
5500765REN1332622878465508984655317Ratregion
5501317ECD1472926479615406496154328Ratregion
5501149PMC150726P940379359600393596406Ratregion
5501277PMC187450P147279359562993596103Ratregion
5501257PMC180917P14097107433797107434206Ratregion
5501556G1598712179359590393596024Ratregion
5505165Trib124879121390691214154Ratregion
5501371STS-Z4144165978550317385503832Ratregion
5501710MYC20379359620293596406Ratregion
5506033UniSTS:49822942479578811895788542Ratregion
5502048MARC_26128-26129:1030370563:115679530195395302102Ratregion
5502611RH1255521677108814011108814178Ratregion
5502433RH1248392667107716443107716709Ratregion
5502565RH1253711857105020870105021055Ratregion
Position Markers

Flank 1: (D7Wox24)
Rat AssemblyChrPosition (strand)Source
GRCr87132,099,989 - 132,100,123 (+)Marker Load Pipeline
Rnor_5.0X115,250,056 - 115,250,191NCBI
RGSC_v3.47137,838,850 - 137,838,984RGD
RGSC_v3.17137,915,287 - 137,915,421RGD
RH 3.4 Map71132.72UniSTS
RH 3.4 Map71132.72RGD
RH 2.0 Map7825.6RGD
Cytogenetic Map7q34UniSTS
Peak: (D7Mit4)
Rat AssemblyChrPosition (strand)Source
GRCr8796,700,404 - 96,700,643 (+)Marker Load Pipeline
mRatBN7.2794,811,085 - 94,811,326 (+)MAPPER
Rnor_6.07103,867,558 - 103,867,802NCBI
Rnor_6.07103,815,550 - 103,815,788NCBI
Rnor_5.07104,437,473 - 104,437,717UniSTS
Rnor_5.07104,385,465 - 104,385,703UniSTS
RGSC_v3.47100,273,558 - 100,273,797RGD
RGSC_v3.47100,273,559 - 100,273,797UniSTS
RGSC_v3.17100,307,789 - 100,308,027RGD
Celera791,443,180 - 91,443,414UniSTS
RH 3.4 Map7657.0RGD
RH 3.4 Map7657.0UniSTS
RH 2.0 Map7534.0RGD
Cytogenetic Map7 RGD
Flank 2: (D7Mit5)
Rat AssemblyChrPosition (strand)Source
GRCr8782,111,245 - 82,111,382 (+)Marker Load Pipeline
mRatBN7.2780,221,299 - 80,221,436 (+)MAPPER
Rnor_6.0788,365,265 - 88,365,401NCBI
Rnor_5.0788,393,619 - 88,393,755UniSTS
RGSC_v3.4785,089,895 - 85,090,032RGD
RGSC_v3.4785,089,896 - 85,090,032UniSTS
RGSC_v3.1785,110,626 - 85,110,762RGD
Celera777,115,894 - 77,116,030UniSTS
RH 3.4 Map7539.2UniSTS
RH 3.4 Map7539.2RGD
RH 2.0 Map7467.1RGD
SHRSP x BN Map747.81RGD
FHH x ACI Map736.72RGD
Cytogenetic Map7 RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat
10450828Scl79Serum cholesterol level QTL 793.50.001blood HDL cholesterol amount (VT:0000184)blood low density lipoprotein cholesterol level (CMO:0000053)789867376101773158Rat
2293685Bmd21Bone mineral density QTL 214.20.0003femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)74765143992651439Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
1331723Bw25Body weight QTL 253.348body mass (VT:0001259)body weight (CMO:0000012)79324212394811326Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)753612714103945643Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)743747099102228765Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
1641908Teswt1Testicular weight QTL 13.28testis mass (VT:1000644)both testes wet weight (CMO:0000175)78022129994811326Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2293644Bmd29Bone mineral density QTL 295.40.0001femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)74765143992651439Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)768938720113886318Rat
2300178Bmd54Bone mineral density QTL 545.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)74765143992651439Rat
724537Niddm52Non-insulin dependent diabetes mellitus QTL 520.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)78022129993595843Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)780221299112308525Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)71965431784928080Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)768938720113886318Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)768938720113886318Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
1298525Cm1Cardiac mass QTL 12.7heart mass (VT:0007028)heart wet weight (CMO:0000069)799736187103146217Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73796056982960569Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)793595647106839474Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
634326Hc3Hypercalciuria QTL 32.1urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)74278731487787314Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)780221299109401111Rat
2293696Bmd32Bone mineral density QTL 325.10.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)74765143992651439Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)762004452101773158Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74659007091590070Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
2293707Bss32Bone structure and strength QTL 327.640.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)74765143992651439Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)761074194106074194Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)74486753389867533Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)762004452101773158Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Tls2

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_disease linked to the increase of T-lymphomas 619600