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Gene: Rnf139 (ring finger protein 139) Rattus norvegicus
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Symbol: Rnf139
Name: ring finger protein 139
Description: Predicted to have protease binding activity and ubiquitin protein ligase activity. Predicted to be involved in several processes, including cellular protein metabolic process; protein destabilization; and regulation of protein metabolic process. Predicted to localize to Derlin-1 retrotranslocation complex and endoplasmic reticulum. Human ortholog(s) of this gene implicated in renal cell carcinoma. Orthologous to human RNF139 (ring finger protein 139); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase RNF139; LOC315000; TRC8
Orthologs:
Homo sapiens (human) : RNF139 (ring finger protein 139)  HGNC  Alliance
Mus musculus (house mouse) : Rnf139 (ring finger protein 139)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rnf139 (ring finger protein 139)
Pan paniscus (bonobo/pygmy chimpanzee) : RNF139 (ring finger protein 139)
Canis lupus familiaris (dog) : RNF139 (ring finger protein 139)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rnf139 (ring finger protein 139)
Sus scrofa (pig) : RNF139 (ring finger protein 139)
Chlorocebus sabaeus (African green monkey) : RNF139 (ring finger protein 139)
Heterocephalus glaber (naked mole-rat) : Rnf139 (ring finger protein 139)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0798,770,840 - 98,782,025 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl798,770,840 - 98,782,025 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0799,371,253 - 99,382,438 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4795,659,052 - 95,661,624 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1795,691,439 - 95,695,125 (+)NCBI
Celera787,205,052 - 87,216,237 (+)NCBICelera
Cytogenetic Map7q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rnf139
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306670
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.