Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Zc3h3 (zinc finger CCCH type containing 3) Rattus norvegicus
Analyze
Symbol: Zc3h3
Name: zinc finger CCCH type containing 3
RGD ID: 1307276
Description: Predicted to have R-SMAD binding activity. Predicted to be involved in mRNA 3'-end processing; positive regulation of activin receptor signaling pathway; and regulation of mRNA polyadenylation. Predicted to localize to mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human ZC3H3 (zinc finger CCCH-type containing 3); INTERACTS WITH bisphenol A; indole-3-methanol; N-nitrosodiethylamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC300032; Zc3hdc3; zinc finger CCCH domain-containing protein 3; zinc finger CCCH type domain containing 3
Orthologs:
Homo sapiens (human) : ZC3H3 (zinc finger CCCH-type containing 3)  HGNC  Alliance
Mus musculus (house mouse) : Zc3h3 (zinc finger CCCH type containing 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zc3h3 (zinc finger CCCH-type containing 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ZC3H3 (zinc finger CCCH-type containing 3)
Canis lupus familiaris (dog) : ZC3H3 (zinc finger CCCH-type containing 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zc3h3 (zinc finger CCCH-type containing 3)
Sus scrofa (pig) : ZC3H3 (zinc finger CCCH-type containing 3)
Chlorocebus sabaeus (African green monkey) : ZC3H3 (zinc finger CCCH-type containing 3)
Heterocephalus glaber (naked mole-rat) : Zc3h3 (zinc finger CCCH-type containing 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07116,787,762 - 116,872,536 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7116,787,766 - 116,872,511 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07116,679,040 - 116,765,271 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47113,714,123 - 113,813,124 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17113,743,162 - 113,847,328 (-)NCBI
Celera7103,802,384 - 103,885,283 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zc3h3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307276
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.