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Gene: Zfat (zinc finger and AT hook domain containing) Rattus norvegicus
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Symbol: Zfat
Name: zinc finger and AT hook domain containing
Description: Predicted to have DNA binding activity and DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in hematopoietic progenitor cell differentiation; regulation of transcription, DNA-templated; and spongiotrophoblast layer development. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in autoimmune thyroiditis. Orthologous to human ZFAT (zinc finger and AT-hook domain containing); INTERACTS WITH acetamide; acrylamide; bis(2-ethylhexyl) phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362925; ZFAT zinc finger 1; Zfat1; Zfp406; zinc finger protein 406; zinc finger protein ZFAT
Orthologs:
Homo sapiens (human) : ZFAT (zinc finger and AT-hook domain containing)  HGNC  Alliance
Mus musculus (house mouse) : Zfat (zinc finger and AT hook domain containing)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zfat (zinc finger and AT-hook domain containing)
Pan paniscus (bonobo/pygmy chimpanzee) : ZFAT (zinc finger and AT-hook domain containing)
Canis lupus familiaris (dog) : ZFAT (zinc finger and AT-hook domain containing)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zfat (zinc finger and AT-hook domain containing)
Sus scrofa (pig) : ZFAT (zinc finger and AT-hook domain containing)
Chlorocebus sabaeus (African green monkey) : ZFAT (zinc finger and AT-hook domain containing)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07109,037,777 - 109,207,511 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7109,037,845 - 109,205,354 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07108,980,615 - 109,149,677 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47105,570,121 - 105,736,965 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17105,604,960 - 105,771,196 (-)NCBI
Celera796,398,419 - 96,565,690 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zfat
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310886
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.